RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DENND11 (Homo sapiens)

Ensembl gene IDs: ENSG00000257093

Ensembl transcript IDs: ENST00000482493.1, ENST00000536163.6, ENST00000574704.1, ENST00000575464.5

Found 618 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGGAGAAGTTCTGCATTGGGGTCAGCTGAGCCCAAGGCCCCTATaGCCTGAAACATGGCACTGCCTCACTGGCACGTTCTCCTCTGGG +
Preference number: 1 (lower is better)
Translates to: KGEVLHWGQLSPRPL*PETWHCLTGTFSSG
Trigger: CCCAGAGGAGAACGTGCCAGTGAGGCAGTGCCATGTTTCAGGTCATAGGGGCCTTGGGCTCAGCTGACCCCAATGCAGAACTTCTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR GCA 90 bp CTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGACATGGATaGACTGACGGCTATTCCCATAACCGAGCCAGGCGGGAAGGGGGA +
Preference number: 1 (lower is better)
Translates to: LLCTLVWLGVGHRHG*TDGYSHNRARREGG
Trigger: TCCCCCTTCCCGCCTGGCTCGGTTATGGGAATAGCCGTCAGTGCATCCATGTCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 90 bp GCCACCCATACCCTGGCCCTCTGCATGAGCAGGAGGGTGGACACGTaGAGATGTGAGACAGAAAGCTACCGAGACAAGCACAAAGTTAAG +
Preference number: 1 (lower is better)
Translates to: ATHTLALCMSRRVDT*RCETESYRDKHKVK
Trigger: CTTAACTTTGTGCTTGTCTCGGTAGCTTTCTGTCTCACATCTCCACGTGTCCACCCTCCTGCTCATGCAGAGGGCCAGGGTATGGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 90 bp TCATGTTGGGGAGCAGAATCTGGCATAGAGCAAGGCTTCGAAAGGTaGTTTCCGAAGCCACAGGCTCCACTTCATAGCCCAGGCAAGACA +
Preference number: 1 (lower is better)
Translates to: SCWGAESGIEQGFER*FPKPQAPLHSPGKT
Trigger: TGTCTTGCCTGGGCTATGAAGTGGAGCCTGTGGCTTCGGAAATCACCTTTCGAAGCCTTGCTCTATGCCAGATTCTGCTCCCCAACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 90 bp TTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATaGTCTCTACCAGGCATAGGGAATGGTTCGTGTTTAAAGGCCAAG +
Preference number: 1 (lower is better)
Translates to: LLRTVQVPGGTLTLE*SLPGIGNGSCLKAK
Trigger: CTTGGCCTTTAAACACGAACCATTCCCTATGCCTGGTAGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 90 bp CCCAGAGGTGCTGCTGCTAATGCCTCCAGAGAATTCGTGTCCAGATaGAGAGACTTAGAGTGGCTTCTCCATCCTGCTCGAACTTCAATT +
Preference number: 1 (lower is better)
Translates to: PRGAAANASREFVSR*RDLEWLLHPARTSI
Trigger: AATTGAAGTTCGAGCAGGATGGAGAAGCCACTCTAAGTCTCTTCATCTGGACACGAATTCTCTGGAGGCATTAGCAGCAGCACCTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 90 bp CAGGCAAGACATACTCTGAGGATGCTCAACAGTGGCAAAGGTAACTaGAGAGATAAAGCACACGCTGTTCAGCCAAGCAGAGGCTCTGCA +
Preference number: 1 (lower is better)
Translates to: QARHTLRMLNSGKGN*RDKAHAVQPSRGSA
Trigger: TGCAGAGCCTCTGCTTGGCTGAACAGCGTGTGCTTTATCTCTTCAGTTACCTTTGCCACTGTTGAGCATCCTCAGAGTATGTCTTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTaGAGAAAGCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAA +
Preference number: 1 (lower is better)
Translates to: LPLLLYLCKVDLYRV*RKHLNPFPGLYSFE
Trigger: TTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGCTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 90 bp CCAGCTCAGATCCTTGCTAGATTTTGGAATCCAGTAAATCTGTGTTaGCCCAGAGGTGCTGCTGCTAATGCCTCCAGAGAATTCGTGTCC +
Preference number: 1 (lower is better)
Translates to: PAQILARFWNPVNLC*PRGAAANASREFVS
Trigger: GGACACGAATTCTCTGGAGGCATTAGCAGCAGCACCTCTGGGTCAACACAGATTTACTGGATTCCAAAATCTAGCAAGGATCTGAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 90 bp CGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATaGAGAAGCTGGCAAGGTAGGGAAGGACCAATTTATTGGAATCTC +
Preference number: 1 (lower is better)
Translates to: RCSAKQRLCTRFLVL*RSWQGREGPIYWNL
Trigger: GAGATTCCAATAAATTGGTCCTTCCCTACCTTGCCAGCTTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR GCA 90 bp AAGTCCACTGCCAAGCTGAGCATTATCCTATTTTATTCATCCACCTaGCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCT +
Preference number: 1 (lower is better)
Translates to: KSTAKLSIILFYSST*PSSFTSARLTYTGS
Trigger: AGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAGGTGGATGAATAAAATAGGATAATGCTCAGCTTGGCAGTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR GCA 90 bp TTGCTTTCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTaGTCAAACACCAAGAATCTCCACCATTCTTCACTTGACAGTCTT +
Preference number: 1 (lower is better)
Translates to: LLSSALSLKSLIQVG*SNTKNLHHSSLDSL
Trigger: AAGACTGTCAAGTGAAGAATGGTGGAGATTCTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGAAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 90 bp GAACCACCATTTGAATGTTATTTCTCCCTGCTGTGTACATTAGTCTaGCTGGGTGTTGGTCACAGACATGGATGCACTGACGGCTATTCC +
Preference number: 1 (lower is better)
Translates to: EPPFECYFSLLCTLV*LGVGHRHGCTDGYS
Trigger: GGAATAGCCGTCAGTGCATCCATGTCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTCAAATGGTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 90 bp CAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCTaGATTCCACTCCCACCTGGAACTTCTTCTGACTTATTCAGGAAC +
Preference number: 1 (lower is better)
Translates to: QAFVIFCMDTNEPQT*IPLPPGTSSDLFRN
Trigger: GTTCCTGAATAAGTCAGAAGAAGTTCCAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 90 bp TGCAACCATCCAACTCAAAGACCTCTGTGTCGACTGTTCACTTTGTaGATCATCTCTGGCTCATTTAAAACATCCTGCCTCATCCCCACA +
Preference number: 1 (lower is better)
Translates to: CNHPTQRPLCRLFTL*IISGSFKTSCLIPT
Trigger: TGTGGGGATGAGGCAGGATGTTTTAAATGAGCCAGAGATGATCCACAAAGTGAACAGTCGACACAGAGGTCTTTGAGTTGGATGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 90 bp GTTTCTCAGAAAATATTTCAAGACTGGCAGAAAAGCAGGTCCACATaGCTCCTAGCTTCTGCTGCCACTGTGGAATTCCCTAGTAGAGAA +
Preference number: 1 (lower is better)
Translates to: VSQKIFQDWQKSRST*LLASAATVEFPSRE
Trigger: TTCTCTACTAGGGAATTCCACAGTGGCAGCAGAAGCTAGGAGCCATGTGGACCTGCTTTTCTGCCAGTCTTGAAATATTTTCTGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 90 bp CTTAAAATTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTaGGCACACCAGTATTCAGGGCAAAATCTATGCAGTGTCTTACTA +
Preference number: 1 (lower is better)
Translates to: LKITTTGNRERARHT*AHQYSGQNLCSVLL
Trigger: TAGTAAGACACTGCATAGATTTTGCCCTGAATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAATTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR GCA 90 bp AGAGCACGGCATACCTGGGCACACCAGTATTCAGGGCAAAATCTATaGAGTGTCTTACTAATTTCATACTATGAGGTAAAGACCCGAAAC +
Preference number: 1 (lower is better)
Translates to: RARHTWAHQYSGQNL*SVLLISYYEVKTRN
Trigger: GTTTCGGGTCTTTACCTCATAGTATGAAATTAGTAAGACACTGCATAGATTTTGCCCTGAATACTGGTGTGCCCAGGTATGCCGTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 90 bp TCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTaGACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGT +
Preference number: 1 (lower is better)
Translates to: SYSQIHQGTKTTQTF*TVHPNVSRAQPTPS
Trigger: ACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR TCA 90 bp AGGGAAATAAATGGTCCCTCGGGTTTCTGCCTTTTCTCGGAGGGTTaGTGTCCTAAAACTGAAAGCCTAATTCATTACTGTCCTTTACAA +
Preference number: 1 (lower is better)
Translates to: REINGPSGFCLFSEG*CPKTESLIHYCPLQ
Trigger: TTGTAAAGGACAGTAATGAATTAGGCTTTCAGTTTTAGGACATCAACCCTCCGAGAAAAGGCAGAAACCCGAGGGACCATTTATTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR GCA 90 bp TCAACAAATGTTCACATGTGGCATCTGGAAGCATGTGCACCTGTGTaGTATCTTAACTTTCTTGTCTTGACTTTAAAGTGGAACAAAACA +
Preference number: 1 (lower is better)
Translates to: STNVHMWHLEACAPV*YLNFLVLTLKWNKT
Trigger: TGTTTTGTTCCACTTTAAAGTCAAGACAAGAAAGTTAAGATAGCACACAGGTGCACATGCTTCCAGATGCCACATGTGAACATTTGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGGGCCCTCTGGGGCCCTaGGGTGAACTCCGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKGPLGP*GELRAA
Trigger: AGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGGGCC...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR CCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAGGCCCTCTGGGGCCCTaGGGTGAACTCCGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: QLWEKVADSNILTWQDTKGPLGP*GELRAA
Trigger: AGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGGGCC...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR TCA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTGGAGAAAGGACCACTGTCCCGGGTaGAGGCACTGCCACATTTTC +
Preference number: 2 (lower is better)
Translates to: LPLLLYLCKVDLYRVWRKDHCPG*RHCHIF
Trigger: GAAAATGTGGCAGTGCCTTCACCCGGGACAGTGGTC...CTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGAAGGCCCCTATGACCTaGAACATGGCACTGCCTCAC +
Preference number: 2 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKKAPMT*NMALPH
Trigger: GTGAGGCAGTGCCATGTTTCAGGTCATAGGGGCCTT...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTGGAGAAAGTCCCAGGTGGGACACTaGCACTGGAATGGTCTCTAC +
Preference number: 2 (lower is better)
Translates to: LPLLLYLCKVDLYRVWRKSQVGH*HWNGLY
Trigger: GTAGAGACCATTCCAGTGTCAGTGTCCCACCTGGGA...CTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR GCA 90 bp GTCCTAAGCCAGGGGCCAACTGGACATTTTCCCAAAGGCTGGGCAGTATCATCTATGGCTCCTAGCTTCTaGTGCCACTGTGGAATTCCC +
Preference number: 2 (lower is better)
Translates to: VLSQGPTGHFPKGWAVSSMAPSF*CHCGIP
Trigger: GGGAATTCCACAGTGGCAGCAGAAGCTAGGAGCCAT...AGATGATACTGCCCAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp TTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTGGGCACACCAGTATTGAGGACCAGCAGCTCTaGGAGAAAGTGGCAGATTCC +
Preference number: 2 (lower is better)
Translates to: LPPLETEREHGIPGHTSIEDQQL*EKVADS
Trigger: GGAATCTGCCACTTTCTCCCAGAGCTGCTGGTCCTC...AATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTGGAGAAGTTCTGCATTaGGGTCAGCTGAGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSGEVLH*GQLSPR
Trigger: CCTTGGGCTCAGCTGACCCCAATGCAGAACTTCTCC...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGAGGCCCGGCAGGAGATaGTGGCAGAAGGTGTCACAC +
Preference number: 2 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLRPGRR*WQKVSH
Trigger: GTGTGACACCTTCTGCCACCATCTCCTGCCGGGCCT...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp GTCCTAAGCCAGGGGCCAACTGGACATTTTCCCAAAGGCTGGGCAGTATCATCTAGGCAAGACATACTCTaGGGATGCTCAACAGTGGCA +
Preference number: 2 (lower is better)
Translates to: VLSQGPTGHFPKGWAVSSRQDIL*GCSTVA
Trigger: TGCCACTGTTGAGCATCCTCAGAGTATGTCTTGCCT...AGATGATACTGCCCAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp TTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTGGGCACACCAGTATTGGCTTTCTAACTGGTTaGCAAACACGTAAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LPPLETEREHGIPGHTSIGFLTG*QTRKLP
Trigger: GGGCAGCTTACGTGTTTGTCAACCAGTTAGAAAGCC...AATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR GCA 90 bp GTCCTAAGCCAGGGGCCAACTGGACATTTTCCCAAAGGCTGGGCAGTATCATCTGTGGCTTCTCCATCCTaGTCGAACTTCAATTGCTCT +
Preference number: 2 (lower is better)
Translates to: VLSQGPTGHFPKGWAVSSVASPS*SNFNCS
Trigger: AGAGCAATTGAAGTTCGAGCAGGATGGAGAAGCCAC...AGATGATACTGCCCAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTTAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGACATCCCACGTGAAGTaGCTCCCAGTCCTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVTSHVK*LPVLLA
Trigger: AGCCAACAGGACTGGGAGCCACTTCACGTGGGATGT...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR CCA 90 bp CCTCTTGAACAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCACATCCCACGTGAAGTaGCTCCCAGTCCTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: PLEQAFVIFCMDTNEPQTTSHVK*LPVLLA
Trigger: AGCCAACAGGACTGGGAGCCACTTCACGTGGGATGT...GGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTGTTCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAAAAAATGAGGCCCTCTaGGGCCCTGGGGTGAACTCC +
Preference number: 2 (lower is better)
Translates to: QLWEKVADSNILTWQDTKKNEAL*GPGVNS
Trigger: GGAGTTCACCCCAGGGCCCCAGAGGGCCTCATTTTT...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
51% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR CCA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTGGAGAAAGTCGAAGGGAAATAAATaGTCCCTCGGGTTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: LPLLLYLCKVDLYRVWRKSKGNK*SLGFLP
Trigger: AGGCAGAAACCCGAGGGACCATTTATTTCCCTTCGA...CTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGGTGATACAACTCCCATaGCCAAGCCCAGAGGACCAG +
Preference number: 2 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGVIQLP*PSPEDQ
Trigger: CTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCAC...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR TCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGACCATCAAGTTACTTTaGGGAAGGTTTCCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKTIKLL*GRFPGF
Trigger: GAAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGT...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAGGCTTTCTAACTGGTTaGCAAACACGTAAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEEGFLTG*QTRKLP
Trigger: GGGCAGCTTACGTGTTTGTCAACCAGTTAGAAAGCC...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGGGACACGTGGAGATGTaGGACAGAAAGCTACCGAGA +
Preference number: 2 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLGHVEM*DRKLPR
Trigger: TCTCGGTAGCTTTCTGTCTCACATCTCCACGTGTCC...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR GCA 90 bp GTCCTAAGCCAGGGGCCAACTGGACATTTTCCCAAAGGCTGGGCAGTATCATCTGCCTTTGTCATATTTTaGATGGATACCAACGAGCCC +
Preference number: 2 (lower is better)
Translates to: VLSQGPTGHFPKGWAVSSAFVIF*MDTNEP
Trigger: GGGCTCGTTGGTATCCATGCAAAATATGACAAAGGC...AGATGATACTGCCCAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTTAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGAAAAATGAGGCCCTCTaGGGCCCTGGGGTGAACTCC +
Preference number: 2 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKKNEAL*GPGVNS
Trigger: GGAGTTCACCCCAGGGCCCCAGAGGGCCTCATTTTT...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR CCA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCGAGGACCAGCAGCTCTaGGAGAAAGTGGCAGATTCC +
Preference number: 2 (lower is better)
Translates to: ASQSIPWAIQFRREINGPEDQQL*EKVADS
Trigger: GGAATCTGCCACTTTCTCCCAGAGCTGCTGGTCCTC...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp GAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAAGGTTTCCAGGCTGTGATACAACTCCCATaGCCAAGCCCAGAGGACCAG +
Preference number: 2 (lower is better)
Translates to: EHYIAWPPSSYFEEGFQAVIQLP*PSPEDQ
Trigger: CTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCAC...AGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR TCA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCGGCATGAGATCAGGCTaGCAGCTTCACAGGAGAACT +
Preference number: 2 (lower is better)
Translates to: ASQSIPWAIQFRREINGPGMRSG*QLHRRT
Trigger: AGTTCTCCTGTGAAGCTGTCAGCCTGATCTCATGCC...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTGGAGAAAGTCAGTGCATCAAGACTaGGAGCAAATTCATCCTCAT +
Preference number: 2 (lower is better)
Translates to: LPLLLYLCKVDLYRVWRKSVHQD*EQIHPH
Trigger: ATGAGGATGAATTTGCTCTCAGTCTTGATGCACTGA...CTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR GCA 90 bp GAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAATTGTGGCTTCTCCATCCTaGTCGAACTTCAATTGCTCT +
Preference number: 2 (lower is better)
Translates to: EGSEQKCLKQLLPADSLIVASPS*SNFNCS
Trigger: AGAGCAATTGAAGTTCGAGCAGGATGGAGAAGCCAC...AATTAGGGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR GCA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGGACAAACACGTAAGCTaGCCTCCTGCAAAAGCCAAC +
Preference number: 2 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLDKHVS*PPAKAN
Trigger: GTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTC...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGACATCCCACGTGAAGTaGCTCCCAGTCCTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKTSHVK*LPVLLA
Trigger: AGCCAACAGGACTGGGAGCCACTTCACGTGGGATGT...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR CCA 90 bp GAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAATTTCGACCCACAGGAACTaGCTTTCTAACTGGTTGACA +
Preference number: 2 (lower is better)
Translates to: EGSEQKCLKQLLPADSLISTHRN*LSNWLT
Trigger: TGTCAACCAGTTAGAAAGCCAGTTCCTGTGGGTCGA...AATTAGGGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGGTTAATCTGTCATGTTaGGGAGCAGAATCTGGCATA +
Preference number: 2 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKVNLSC*GAESGI
Trigger: TATGCCAGATTCTGCTCCCCAACATGACAGATTAAC...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTACCAGGCATAGGGAATaGTTCGTGTTTAAAGGCCAA +
Preference number: 2 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSTRHRE*FVFKGQ
Trigger: TTGGCCTTTAAACACGAACCATTCCCTATGCCTGGT...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 90 bp CTATTTTATTCATCCACCTGCCCCTCCTCCTTTACCTCTGCAAGGTaGACCTATACAGGGTCTGGAGAAAGCATCTCAATCCATTCCCTG +
Preference number: 2 (lower is better)
Translates to: LFYSSTCPSSFTSAR*TYTGSGESISIHSL
Trigger: CAGGGAATGGATTGAGATGCTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAGGTGGATGAATAAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp GAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAATTACCACACAGACTTTCTaGACAGTCCATCCCAATGTT +
Preference number: 2 (lower is better)
Translates to: EGSEQKCLKQLLPADSLITTQTF*TVHPNV
Trigger: AACATTGGGATGGACTGTTCAGAAAGTCTGTGTGGT...AATTAGGGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTGGAGAAAGAGAGAAGTGTGTTTGTaGGGGGTCCAAAATGATAAA +
Preference number: 2 (lower is better)
Translates to: LPLLLYLCKVDLYRVWRKREVCL*GVQNDK
Trigger: TTTATCATTTTGGACCCCTCACAAACACACTTCTCT...CTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCGGAACCCAGAAGCCCTaGCTCACCATTCAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: ASQSIPWAIQFRREINGPGTQKP*LTIQRK
Trigger: TTTCCTTTGAATGGTGAGTCAGGGCTTCTGGGTTCC...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGAGATTTCTGGTCCTATaGAGAAGCTGGCAAGGTAGG +
Preference number: 2 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLRFLVL*RSWQGR
Trigger: CCTACCTTGCCAGCTTCTTCATAGGACCAGAAATCT...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGTTACAAAAGCTTCCCTaGAGGCCTCAGTTTAAAGAT +
Preference number: 2 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKLQKLP*RPQFKD
Trigger: ATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAA...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAGCCACAGGGGACAGGTaGTTGTCTTATTCTCAAATA +
Preference number: 2 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEEATGDR*LSYSQI
Trigger: TATTTGAGAATAAGACAACCACCTGTCCCCTGTGGC...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCCTCCAAGGCCAGCATTaGCCCTTAGCAATTCACCAA +
Preference number: 2 (lower is better)
Translates to: ASQSIPWAIQFRREINGPLQGQH*PLAIHQ
Trigger: TTGGTGAATTGCTAAGGGCCAATGCTGGCCTTGGAG...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp CCTCTTGAACAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCCTGTGTACATTAGTCTaGCTGGGTGTTGGTCACAGA +
Preference number: 2 (lower is better)
Translates to: PLEQAFVIFCMDTNEPQTLCTLV*LGVGHR
Trigger: TCTGTGACCAACACCCAGCCAGACTAATGTACACAG...GGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTGTTCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp CCTCTTGAACAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCGACACAAAACCAAGGTaGTCTCACCTTATCTCTAGG +
Preference number: 2 (lower is better)
Translates to: PLEQAFVIFCMDTNEPQTDTKPR*SHLISR
Trigger: CCTAGAGATAAGGTGAGATCACCTTGGTTTTGTGTC...GGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTGTTCAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp CCTCTTGAACAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCACCACACAGACTTTCTaGACAGTCCATCCCAATGTT +
Preference number: 2 (lower is better)
Translates to: PLEQAFVIFCMDTNEPQTTTQTF*TVHPNV
Trigger: AACATTGGGATGGACTGTTCAGAAAGTCTGTGTGGT...GGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTGTTCAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTACAAGAAAAGGGATTTaGTCCCAAGACTATAGACTC +
Preference number: 2 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSTRKGI*SQDYRL
Trigger: GAGTCTATAGTCTTGGGATCAAATCCCTTTTCTTGT...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAATACACATTACTGAAATaGCAGCAACCCACATTGCAG +
Preference number: 2 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEEYTLLK*QQPTLQ
Trigger: CTGCAATGTGGGTTGCTGTCATTTCAGTAATGTGTA...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGGTTCATTTCACAGTGTaGCATGAGATCAGGCTGACA +
Preference number: 2 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLVHFTV*HEIRLT
Trigger: TGTCAGCCTGATCTCATGCCACACTGTGAAATGAAC...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 90 bp ATTTGCAACCATCCAACTCAAAGACCTCTGTGTCGACTGTTCACTTaGTGGATCATCTCTGGCTCATTTAAAACATCCTGCCTCATCCCC +
Preference number: 2 (lower is better)
Translates to: ICNHPTQRPLCRLFT*WIISGSFKTSCLIP
Trigger: GGGGATGAGGCAGGATGTTTTAAATGAGCCAGAGATGATCCACAAAGTGAACAGTCGACACAGAGGTCTTTGAGTTGGATGGTTGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCAGTGATACAACTCCCATaGCCAAGCCCAGAGGACCAG +
Preference number: 2 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPVIQLP*PSPEDQ
Trigger: CTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCAC...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACCACACAGACTTTCTaGACAGTCCATCCCAATGTT +
Preference number: 2 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGTTQTF*TVHPNV
Trigger: AACATTGGGATGGACTGTTCAGAAAGTCTGTGTGGT...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR TCA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTAAGGAGAATAAAAGGTaGGGCTTCAACCTCGAAACA +
Preference number: 2 (lower is better)
Translates to: QSIPWAIQFRREINGPSGKENKR*GFNLET
Trigger: TGTTTCGAGGTTGAAGCCTCACCTTTTATTCTCCTT...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 90 bp GAACTTCATTCTCACCCTGCTATGTTTACACCAGCACTTCTGAGCTaGCAGTTAAAACTGCAGTGTTTGCATATAGAAGGCTCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: ELHSHPAMFTPALLS*QLKLQCLHIEGSEQ
Trigger: CTGCTCTGAGCCTTCTATATGCAAACACTGCAGTTTTAACTGCAAGCTCAGAAGTGCTGGTGTAAACATAGCAGGGTGAGAATGAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGACACAAAACCAAGGTaGTCTCACCTTATCTCTAGG +
Preference number: 2 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKDTKPR*SHLISR
Trigger: CCTAGAGATAAGGTGAGATCACCTTGGTTTTGTGTC...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR TCA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGCTCCAAGAGCATTATTaGACCCTTAAGAGACTAAAC +
Preference number: 2 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLLQEHY*TLKRLN
Trigger: GTTTAGTCTCTTAAGGGTTCAATAATGCTCTTGGAG...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR GCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTCCTGAAACATGGCACTaGCTCACTGGCACGTTCTCC +
Preference number: 2 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFPETWH*LTGTFS
Trigger: GGAGAACGTGCCAGTGAGGCAGTGCCATGTTTCAGG...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGTCCAATATCCTAACATaGCAGGACACAAAACCAAGG +
Preference number: 2 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGSNILT*QDTKPR
Trigger: CCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGA...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR CAA 90 bp ATTCATCCCAAGAAGAGGAAGGTTCAGACAAAGAGGAACATTACATaGCATGGCCACCATCAAGTTACTTTGAGGAAGGTTTCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: IHPKKRKVQTKRNIT*HGHHQVTLRKVSRL
Trigger: AAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTTCCTCTTCTTGGGATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 90 bp ATGTTTACACCAGCACTTCTGAGCTTGCAGTTAAAACTGCAGTGTTaGCATATAGAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTT +
Preference number: 2 (lower is better)
Translates to: MFTPALLSLQLKLQC*HIEGSEQKCLKQLL
Trigger: AAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTCTATATGCAAACACTGCAGTTTTAACTGCAAGCTCAGAAGTGCTGGTGTAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR GCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCAGACAAACACGTAAGCTaGCCTCCTGCAAAAGCCAAC +
Preference number: 2 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPDKHVS*PPAKAN
Trigger: GTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTC...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR GCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTATGGCTCCTAGCTTCTaGTGCCACTGTGGAATTCCC +
Preference number: 2 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFMAPSF*CHCGIP
Trigger: GGGAATTCCACAGTGGCAGCAGAAGCTAGGAGCCAT...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGTCCAATATCCTAACATaGCAGGACACAAAACCAAGG +
Preference number: 2 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKSNILT*QDTKPR
Trigger: CCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGA...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR CCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTAAGCCAGGGGCCAACTaGACATTTTCCCAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFKPGAN*TFSQRL
Trigger: CAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTT...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGACCACACAGACTTTCTaGACAGTCCATCCCAATGTT +
Preference number: 2 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLTTQTF*TVHPNV
Trigger: AACATTGGGATGGACTGTTCAGAAAGTCTGTGTGGT...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR CCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACGCCACAGGGGACAGGTaGTTGTCTTATTCTCAAATA +
Preference number: 2 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNATGDR*LSYSQI
Trigger: TATTTGAGAATAAGACAACCACCTGTCCCCTGTGGC...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR-3UTR CCA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCGAACATTACATTGCATaGCCACCATCAAGTTACTTT +
Preference number: 2 (lower is better)
Translates to: ASQSIPWAIQFRREINGPEHYIA*PPSSYF
Trigger: AAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTCTCCAAGGCCAGCATTaGCCCTTAGCAATTCACCAA +
Preference number: 2 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFLQGQH*PLAIHQ
Trigger: TTGGTGAATTGCTAAGGGCCAATGCTGGCCTTGGAG...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGCAATCATTTCCAAACTaGCACATAGTTCATTTCACA +
Preference number: 2 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLQSFPN*HIVHFT
Trigger: TGTGAAATGAACTATGTGCCAGTTTGGAAATGATTG...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCAGAATTCGTGTCCAGATaGAGAGACTTAGAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPEFVSR*RDLEWL
Trigger: AAGCCACTCTAAGTCTCTTCATCTGGACACGAATTC...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTAGATTTCTGGTCCTATaGAGAAGCTGGCAAGGTAGG +
Preference number: 2 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFRFLVL*RSWQGR
Trigger: CCTACCTTGCCAGCTTCTTCATAGGACCAGAAATCT...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTCCACCATTCTTCACTTaGCAGTCTTTGTGGACACGT +
Preference number: 2 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPPPFFT*QSLWTR
Trigger: ACGTGTCCACAAAGACTGTCAAGTGAAGAATGGTGG...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTCTTCTGCTGCCACTGTaGAATTCCCTAGTAGAGAAC +
Preference number: 2 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFLLLPL*NSLVEN
Trigger: GTTCTCTACTAGGGAATTCCACAGTGGCAGCAGAAG...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTCATTTTCCCAAAGGCTaGGCAGTATCATCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPHFPKG*AVSSAE
Trigger: CTCAGCAGATGATACTGCCCAGCCTTTGGGAAAATG...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTCTCCCCCTAACCAGGTaGAAGCACAGATGCTATAAT +
Preference number: 2 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFLPLTR*KHRCYN
Trigger: ATTATAGCATCTGTGCTTCCACCTGGTTAGGGGGAG...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTACTAAGAATCTTATCTTaGGATGAGATGTGTGAACCA +
Preference number: 2 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLLRILS*DEMCEP
Trigger: TGGTTCACACATCTCATCTCAAGATAAGATTCTTAG...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCATCCAATATCCTAACATaGCAGGACACAAAACCAAGG +
Preference number: 2 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPSNILT*QDTKPR
Trigger: CCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGA...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTGCCACAGGGGACAGGTaGTTGTCTTATTCTCAAATA +
Preference number: 2 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPATGDR*LSYSQI
Trigger: TATTTGAGAATAAGACAACCACCTGTCCCCTGTGGC...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR GCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTGACAGCAACCCACATTaGAGAGGAGAAAAGTCTATT +
Preference number: 2 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPDSNPH*RGEKSI
Trigger: AATAGACTTTTCTCCTCTGCAATGTGGGTTGCTGTC...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTACAAATGTTCACATGTaGCATCTGGAAGCATGTGCA +
Preference number: 2 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFTNVHM*HLEACA
Trigger: TGCACATGCTTCCAGATGCCACATGTGAACATTTGT...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR TCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTAGAGAAGTGTGTTTGTaGGGGGTCCAAAATGATAAA +
Preference number: 2 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFREVCL*GVQNDK
Trigger: TTTATCATTTTGGACCCCTCACAAACACACTTCTCT...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTTTGTCATATTTTGCATaGATACCAACGAGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPLSYFA*IPTSPK
Trigger: TTTGGGGCTCGTTGGTATCCATGCAAAATATGACAA...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 72 bp GCATTGGGGTCAGCTGAGCCCAAGGCCCCTATGACCTaGAACATGGCACTGCCTCACTGGCACGTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: ALGSAEPKAPMT*NMALPHWHVLL
Trigger: GAGGAGAACGTGCCAGTGAGGCAGTGCCATGTTTCAGGTCATAGGGGCCTTGGGCTCAGCTGACCCCAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 72 bp GTTCTGCATTGGGGTCAGCTGAGCCCAAGGCCCCTATaGCCTGAAACATGGCACTGCCTCACTGGCACGTTC +
Preference number: 3 (lower is better)
Translates to: VLHWGQLSPRPL*PETWHCLTGTF
Trigger: GAACGTGCCAGTGAGGCAGTGCCATGTTTCAGGTCATAGGGGCCTTGGGCTCAGCTGACCCCAATGCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 72 bp ACCCTGGCCCTCTGCATGAGCAGGAGGGTGGACACGTaGAGATGTGAGACAGAAAGCTACCGAGACAAGCAC +
Preference number: 3 (lower is better)
Translates to: TLALCMSRRVDT*RCETESYRDKH
Trigger: GTGCTTGTCTCGGTAGCTTTCTGTCTCACATCTCCACGTGTCCACCCTCCTGCTCATGCAGAGGGCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR GCA 72 bp ACATTAGTCTGGCTGGGTGTTGGTCACAGACATGGATaGACTGACGGCTATTCCCATAACCGAGCCAGGCGG +
Preference number: 3 (lower is better)
Translates to: TLVWLGVGHRHG*TDGYSHNRARR
Trigger: CCGCCTGGCTCGGTTATGGGAATAGCCGTCAGTGCATCCATGTCTGTGACCAACACCCAGCCAGACTAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CAA 90 bp GAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAATTAGGACCCCTCAACCCTaGAGAGGCAAGAAGAGAGGG +
Preference number: 3 (lower is better)
Translates to: EGSEQKCLKQLLPADSLIRTPQP*RGKKRG
Trigger: CCCTCTCTTCTTGCCTCTCAAGGGTTGAGGGGTCCT...AATTAGGGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 72 bp GGAGCAGAATCTGGCATAGAGCAAGGCTTCGAAAGGTaGTTTCCGAAGCCACAGGCTCCACTTCATAGCCCA +
Preference number: 3 (lower is better)
Translates to: GAESGIEQGFER*FPKPQAPLHSP
Trigger: TGGGCTATGAAGTGGAGCCTGTGGCTTCGGAAATCACCTTTCGAAGCCTTGCTCTATGCCAGATTCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 72 bp AAACTCCTTGTGGAGAGTCCTAAGCCAGGGGCCAACTaGACATTTTCCCAAAGGCTGGGCAGTATCATCTGC +
Preference number: 3 (lower is better)
Translates to: KLLVESPKPGAN*TFSQRLGSIIC
Trigger: GCAGATGATACTGCCCAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTTAGGACTCTCCACAAGGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CAA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTGGAGAAAGCCAGCACTTCTGAGCTaGCAGTTAAAACTGCAGTGT +
Preference number: 3 (lower is better)
Translates to: LPLLLYLCKVDLYRVWRKPALLS*QLKLQC
Trigger: ACACTGCAGTTTTAACTGCAAGCTCAGAAGTGCTGG...CTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CAA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGACCATTTCAAACTCCTaGTGGAGAGTCCTAAGCCAG +
Preference number: 3 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKTISNS*WRVLSQ
Trigger: CTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGT...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 72 bp GCTGCTGCTAATGCCTCCAGAGAATTCGTGTCCAGATaGAGAGACTTAGAGTGGCTTCTCCATCCTGCTCGA +
Preference number: 3 (lower is better)
Translates to: AAANASREFVSR*RDLEWLLHPAR
Trigger: TCGAGCAGGATGGAGAAGCCACTCTAAGTCTCTTCATCTGGACACGAATTCTCTGGAGGCATTAGCAGCAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 72 bp ACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATaGTCTCTACCAGGCATAGGGAATGGTTCGTGTTTA +
Preference number: 3 (lower is better)
Translates to: TVQVPGGTLTLE*SLPGIGNGSCL
Trigger: TAAACACGAACCATTCCCTATGCCTGGTAGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 72 bp ACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTaGGCACACCAGTATTCAGGGCAAAATCTATGCAGT +
Preference number: 3 (lower is better)
Translates to: TTTGNRERARHT*AHQYSGQNLCS
Trigger: ACTGCATAGATTTTGCCCTGAATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 72 bp CATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATaGTCCCTCGGGTTTCTGCCTTTTCTCGGAGGGTTG +
Preference number: 3 (lower is better)
Translates to: HSLGYTVSKGNK*SLGFLPFLGGL
Trigger: CAACCCTCCGAGAAAAGGCAGAAACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 72 bp TTCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTaGCTGCTCAAACACCAAGAATCTCCACCATTCTTC +
Preference number: 3 (lower is better)
Translates to: FLCSVPEVTHPG*LLKHQESPPFF
Trigger: GAAGAATGGTGGAGATTCTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CAA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTAACCAGCTCAGATCCTaGCTAGATTTTGGAATCCAG +
Preference number: 3 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSNQLRS*LDFGIQ
Trigger: CTGGATTCCAAAATCTAGCAAGGATCTGAGCTGGTT...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 72 bp GCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATaGAGAAGCTGGCAAGGTAGGGAAGGACCAATTTAT +
Preference number: 3 (lower is better)
Translates to: AKQRLCTRFLVL*RSWQGREGPIY
Trigger: ATAAATTGGTCCTTCCCTACCTTGCCAGCTTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 72 bp TCCAAACTGGCACATAGTTCATTTCACAGTGTGGCATaGGATCAGGCTGACAGCTTCACAGGAGAACTAGGC +
Preference number: 3 (lower is better)
Translates to: SKLAHSSFHSVA*DQADSFTGELG
Trigger: GCCTAGTTCTCCTGTGAAGCTGTCAGCCTGATCTCATGCCACACTGTGAAATGAACTATGTGCCAGTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR GCA 72 bp TCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTaGTCAAACACCAAGAATCTCCACCATTCTTCACTT +
Preference number: 3 (lower is better)
Translates to: SALSLKSLIQVG*SNTKNLHHSSL
Trigger: AAGTGAAGAATGGTGGAGATTCTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CAA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGACTGCTCGAACTTCAATaGCTCTATCCTCCGGTAGTC +
Preference number: 3 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRLLELQ*LYPPVV
Trigger: GACTACCGGAGGATAGAGCAATTGAAGTTCGAGCAG...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CAA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGATTGAAAATGCCCTCTaGAACAGGCCTTTGTCATAT +
Preference number: 3 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKIENAL*NRPLSY
Trigger: ATATGACAAAGGCCTGTTCAAGAGGGCATTTTCAAT...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CAA 90 bp CTGGTAGCAAAGGATCCTAGGTTGTGCCTGTTAATCTGTCATGTTGGGGAGCAGAAAAAGGAGGTCTTCTaGTGTCCTCTAGGAGAATCA +
Preference number: 3 (lower is better)
Translates to: LVAKDPRLCLLICHVGEQKKEVF*CPLGES
Trigger: TGATTCTCCTAGAGGACACAAGAAGACCTCCTTTTT...CTGCTCCCCAACATGACAGATTAACAGGCACAACCTAGGATCCTTTGCTACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 72 bp CATACTCTGAGGATGCTCAACAGTGGCAAAGGTAACTaGAGAGATAAAGCACACGCTGTTCAGCCAAGCAGA +
Preference number: 3 (lower is better)
Translates to: HTLRMLNSGKGN*RDKAHAVQPSR
Trigger: TCTGCTTGGCTGAACAGCGTGTGCTTTATCTCTTCAGTTACCTTTGCCACTGTTGAGCATCCTCAGAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CAA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGTGTGTGAACCACCATTaGAATGTTATTTCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLCVNHH*NVISPC
Trigger: GCAGGGAGAAATAACATTCAAATGGTGGTTCACACA...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 72 bp TTTGAATGTTATTTCTCCCTGCTGTGTACATTAGTCTaGCTGGGTGTTGGTCACAGACATGGATGCACTGAC +
Preference number: 3 (lower is better)
Translates to: FECYFSLLCTLV*LGVGHRHGCTD
Trigger: GTCAGTGCATCCATGTCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 72 bp ATACAGGGTCTGGAGAAAGCATCTCAATCCATTCCCTaGGCTATACAGTTTCGAAGGGAAATAAATGGTCCC +
Preference number: 3 (lower is better)
Translates to: IQGLEKASQSIP*AIQFRREINGP
Trigger: GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGCTTTCTCCAGACCCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CCA 72 bp CCAACTCAAAGACCTCTGTGTCGACTGTTCACTTTGTaGATCATCTCTGGCTCATTTAAAACATCCTGCCTC +
Preference number: 3 (lower is better)
Translates to: PTQRPLCRLFTL*IISGSFKTSCL
Trigger: GAGGCAGGATGTTTTAAATGAGCCAGAGATGATCCACAAAGTGAACAGTCGACACAGAGGTCTTTGAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CAA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCAACTGGAAAATTAATTaGCTTGCAAGCTCCAAGGCC +
Preference number: 3 (lower is better)
Translates to: ASQSIPWAIQFRREINGPNWKIN*LASSKA
Trigger: GGCCTTGGAGCTTGCAAGCAAATTAATTTTCCAGTT...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR TCA 72 bp TCCAATATCCTAACATGGCAGGACACAAAACCAAGGTaGTCTCACCTTATCTCTAGGGAAAAGGGCAGAAAG +
Preference number: 3 (lower is better)
Translates to: SNILTWQDTKPR*SHLISREKGRK
Trigger: CTTTCTGCCCTTTTCCCTAGAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR TCA 72 bp AATGGTCCCTCGGGTTTCTGCCTTTTCTCGGAGGGTTaGTGTCCTAAAACTGAAAGCCTAATTCATTACTGT +
Preference number: 3 (lower is better)
Translates to: NGPSGFCLFSEG*CPKTESLIHYC
Trigger: ACAGTAATGAATTAGGCTTTCAGTTTTAGGACATCAACCCTCCGAGAAAAGGCAGAAACCCGAGGGACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR GCA 72 bp GTTCACATGTGGCATCTGGAAGCATGTGCACCTGTGTaGTATCTTAACTTTCTTGTCTTGACTTTAAAGTGG +
Preference number: 3 (lower is better)
Translates to: VHMWHLEACAPV*YLNFLVLTLKW
Trigger: CCACTTTAAAGTCAAGACAAGAAAGTTAAGATAGCACACAGGTGCACATGCTTCCAGATGCCACATGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR-3UTR CAA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCAAACCAGCTCAGATCCTaGCTAGATTTTGGAATCCAG +
Preference number: 3 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPNQLRS*LDFGIQ
Trigger: CTGGATTCCAAAATCTAGCAAGGATCTGAGCTGGTT...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CCTCTGGGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTGGGGGTCTAGGCCCATaGCCCGGGCATGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLGPWGELRAADIPREVAGGLGP*PGHALL
Trigger: CAGCAGAGCATGCCCGGGGCATGGGCCTAGACCCCC...AGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp GGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCGCAGGCTGCTGCCTCTaGCGGGACCAGCATGGAGCA +
Preference number: 4 (lower is better)
Translates to: GPGVNSGLLTSHVKWLPVAGCCL*RDQHGA
Trigger: TGCTCCATGCTGGTCCCGGCAGAGGCAGCAGCCTGC...GACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp GGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCTGGACTCAGGAATGGTaGCCCCGATGCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GPGVNSGLLTSHVKWLPVWTQEW*PRCQAV
Trigger: CACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCA...GACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTTCTCCACGGGCATGTTaGCAAAGCAGGCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GPWGELRAADIPREVAPSSPRAC*QSRPGR
Trigger: TCGGCCTGGCCTGCTTTGCCAACATGCCCGTGGAGA...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCTGCCGGGACCAGCATaGAGCACCCCCTTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GPWGELRAADIPREVAPSLPGPA*STPFLS
Trigger: GGACAAAAAGGGGGTGCTCCATGCTGGTCCCGGCAG...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp CCTCTGGGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTGAATGGTGCCCCCGATaGCAGGCAGTGAAACGTTGG +
Preference number: 4 (lower is better)
Translates to: PLGPWGELRAADIPREVAEWCPR*QAVKRW
Trigger: CCAACGTTTCACTGCCTGGCATCGGGGGCACCATTC...AGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CCTCTGGGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCTGGCATCTCCAACTaGTGCCGAACCTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLGPWGELRAADIPREVAPGISN*CRTWFS
Trigger: GGAGAACCAGGTTCGGCACCAGTTGGAGATGCCAGG...AGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp CCTCTGGGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTGTGATACAACTCCCATaGCCAAGCCCAGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PLGPWGELRAADIPREVAVIQLP*PSPEDQ
Trigger: CTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCAC...AGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTGCCCCGGGCATGCTCTaGTGTCAGAGTTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: GPWGELRAADIPREVAPSAPGML*CQSFVL
Trigger: CAAGACAAAACTCTGACAGCAGAGCATGCCCGGGGC...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTACATCCCACGTGAAGTaGCTCCCAGTCCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GPWGELRAADIPREVAPSTSHVK*LPVLLA
Trigger: AGCCAACAGGACTGGGAGCCACTTCACGTGGGATGT...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTGTGCGAACACCACTGTaGGGCTGGGACTCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPVRTPL*GWDSEE
Trigger: CTCCTCTGAGTCCCAGCCCCACAGTGGTGTTCGCAC...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS-3UTR TCA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTGTCAGAGTTTTGTCTTaGCTGGCAGACACCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GPWGELRAADIPREVAPSVRVLS*LADTSN
Trigger: GTTGGAGGTGTCTGCCAGTCAAGACAAAACTCTGAC...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp GGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCGGAGATAAAAGCCCATaGCTGGCATATTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GPGVNSGLLTSHVKWLPVGDKSP*LAYWSP
Trigger: TGGGGACCAATATGCCAGGCATGGGCTTTTATCTCC...GACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTGGAGATAAAAGCCCATaGCTGGCATATTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GPWGELRAADIPREVAPSGDKSP*LAYWSP
Trigger: TGGGGACCAATATGCCAGGCATGGGCTTTTATCTCC...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTAGATTTCTGGTCCTATaGAGAAGCTGGCAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GPWGELRAADIPREVAPSRFLVL*RSWQGR
Trigger: CCTACCTTGCCAGCTTCTTCATAGGACCAGAAATCT...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTGGGGGTCTAGGCCCATaGCCCGGGCATGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSGGLGP*PGHALL
Trigger: CAGCAGAGCATGCCCGGGGCATGGGCCTAGACCCCC...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCTAAGGCAAGTCCACTaGCAAGCTGAGCATTATCCT +
Preference number: 4 (lower is better)
Translates to: GPWGELRAADIPREVAPSLRQVH*QAEHYP
Trigger: AGGATAATGCTCAGCTTGGCAGTGGACTTGCCTTAG...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTGAGGACCAGCAGCTCTaGGAGAAAGTGGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPEDQQL*EKVADS
Trigger: GGAATCTGCCACTTTCTCCCAGAGCTGCTGGTCCTC...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp CTGGTAGCAAAGGATCCTAGGTTGTGCCTGTTAATCTGTCATGTTGGGGAGCAGGGCGCCGCGTCTCCCTaGTCCACCATGGCTAGGCGA +
Preference number: 4 (lower is better)
Translates to: LVAKDPRLCLLICHVGEQGAASP*STMARR
Trigger: TCGCCTAGCCATGGTGGAGCAGGGAGACGCGGCGCC...CTGCTCCCCAACATGACAGATTAACAGGCACAACCTAGGATCCTTTGCTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536163.6
CDS-3UTR GCA 90 bp GGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCTTTTATTCATCCACCTaGCCCTCCTCCTTTACCTCT +
Preference number: 4 (lower is better)
Translates to: GPGVNSGLLTSHVKWLPVFYSST*PSSFTS
Trigger: AGAGGTAAAGGAGGAGGGGCAGGTGGATGAATAAAA...GACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GCTCAGCCTACTCCTAGTGATACAACTCCCATGACCAAGCCCAGAGGACCAGCATCTCCACGGGCATGTTaGCAAAGCAGGCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: AQPTPSDTTPMTKPRGPASPRAC*QSRPGR
Trigger: TCGGCCTGGCCTGCTTTGCCAACATGCCCGTGGAGA...TGCTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCACTAGGAGTAGGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCGAGTTTTGTCTTGACTaGCAGACACCTCCAACAAAG +
Preference number: 4 (lower is better)
Translates to: GPGVNSGLLTSHVKWLPVEFCLD*QTPPTK
Trigger: CTTTGTTGGAGGTGTCTGCCAGTCAAGACAAAACTC...GACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GCTCAGCCTACTCCTAGTGATACAACTCCCATGACCAAGCCCAGAGGACCAGCAGGCTCCCAGTCCTGTTaGCTCCTCCTACGGGCAACA +
Preference number: 4 (lower is better)
Translates to: AQPTPSDTTPMTKPRGPAGSQSC*LLLRAT
Trigger: TGTTGCCCGTAGGAGGAGCCAACAGGACTGGGAGCC...TGCTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCACTAGGAGTAGGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCTCTGCACAAGATTTCTaGTCCTATGAAGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPGVNSGLLTSHVKWLPVSAQDF*SYEEAG
Trigger: GCCAGCTTCTTCATAGGACCAGAAATCTTGTGCAGA...GACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GCTCAGCCTACTCCTAGTGATACAACTCCCATGACCAAGCCCAGAGGACCAGCACGGATGCCCTGTCACTaGAGTGCGAACACCACTGTG +
Preference number: 4 (lower is better)
Translates to: AQPTPSDTTPMTKPRGPARMPCH*SANTTV
Trigger: CACAGTGGTGTTCGCACTTCAGTGACAGGGCATCCG...TGCTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCACTAGGAGTAGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS-3UTR TCA 90 bp CATATAGAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCCCTGGCCCTCTGCATaGGCAGGAGGGTGGACACGT +
Preference number: 4 (lower is better)
Translates to: HIEGSEQKCLKQLLPADSPWPSA*AGGWTR
Trigger: ACGTGTCCACCCTCCTGCTCATGCAGAGGGCCAGGG...GGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTCTATATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTTTTCACAGTGTGGCATaGGATCAGGCTGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPFHSVA*DQADSF
Trigger: GAAGCTGTCAGCCTGATCTCATGCCACACTGTGAAA...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTTTACCTCTGCAAGGTTaGCCTATACAGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPLPLQG*PIQGLE
Trigger: CTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAA...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTTACCATGTTTCCGGATaGCCTGTCACTGAAGTGCGA +
Preference number: 4 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPYHVSG*PVTEVR
Trigger: TCGCACTTCAGTGACAGGGCATCCGGAAACATGGTA...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS-3UTR CCA 90 bp GCTCAGCCTACTCCTAGTGATACAACTCCCATGACCAAGCCCAGAGGACCAGCACCTGGCATCTCCAACTaGTGCCGAACCTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: AQPTPSDTTPMTKPRGPAPGISN*CRTWFS
Trigger: GGAGAACCAGGTTCGGCACCAGTTGGAGATGCCAGG...TGCTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCACTAGGAGTAGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GTTGACAAACACGTAAGCTGCCCTCCTGCAAAAGCCAACCAGAGAACAGGCAGGCTGCCGGGACCAGCATaGAGCACCCCCTTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: VDKHVSCPPAKANQRTGRLPGPA*STPFLS
Trigger: GGACAAAAAGGGGGTGCTCCATGCTGGTCCCGGCAG...CCTGCCTGTTCTCTGGTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTAAGCTCCGGTCTCCTTaGGGGTCTAGGCCCATGCCC +
Preference number: 4 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSKLRSP*GSRPMP
Trigger: GGGCATGGGCCTAGACCCCCAAGGAGACCGGAGCTT...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAGGCCCTCTGGGGCCCTaGGGTGAACTCCGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQGPLGP*GELRAA
Trigger: AGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGGGCC...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GCTCAGCCTACTCCTAGTGATACAACTCCCATGACCAAGCCCAGAGGACCAGCAAAAAATGAGGCCCTCTaGGGCCCTGGGGTGAACTCC +
Preference number: 4 (lower is better)
Translates to: AQPTPSDTTPMTKPRGPAKNEAL*GPGVNS
Trigger: GGAGTTCACCCCAGGGCCCCAGAGGGCCTCATTTTT...TGCTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCACTAGGAGTAGGCTGAGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAAACACGGCCACCACCTaGTCCTCCTCCACGTCGCCC +
Preference number: 4 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEENTATT*SSSTSP
Trigger: GGGCGACGTGGAGGAGGACCAGGTGGTGGCCGTGTT...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTGTTAATCTGTCATGTTaGGGAGCAGAATCTGGCATA +
Preference number: 4 (lower is better)
Translates to: GPWGELRAADIPREVAPSVNLSC*GAESGI
Trigger: TATGCCAGATTCTGCTCCCCAACATGACAGATTAAC...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGAGGCCCGGCAGGAGATaGTGGCAGAAGGTGTCACAC +
Preference number: 4 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKRPGRR*WQKVSH
Trigger: GTGTGACACCTTCTGCCACCATCTCCTGCCGGGCCT...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTACACTGACACTGGAATaGTCTCTACCAGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPTLTLE*SLPGIG
Trigger: CCCTATGCCTGGTAGAGACCATTCCAGTGTCAGTGT...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CCTCTGGGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTACAAATGTTCACATGTaGCATCTGGAAGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: PLGPWGELRAADIPREVATNVHM*HLEACA
Trigger: TGCACATGCTTCCAGATGCCACATGTGAACATTTGT...AGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CTGGTAGCAAAGGATCCTAGGTTGTGCCTGTTAATCTGTCATGTTGGGGAGCAGTCTGCCTCTGCTCGTTaGGCCGGCGGTACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LVAKDPRLCLLICHVGEQSASAR*AGGTSP
Trigger: GGGAGAAGTACCGCCGGCTCAACGAGCAGAGGCAGA...CTGCTCCCCAACATGACAGATTAACAGGCACAACCTAGGATCCTTTGCTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CCTCTGGGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTACCTCCAACAAAGTCTaGAATATCCGGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: PLGPWGELRAADIPREVATSNKV*NIRLFC
Trigger: ACAAAACAACCGGATATTTCAGACTTTGTTGGAGGT...AGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGAGCGGGGGTCGAAGGTaGCCACGAACACGGCCACCA +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVSGGRR*PRTRPP
Trigger: TGGTGGCCGTGTTCGTGGTCACCTTCGACCCCCGCT...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTGGGCACACCAGTATTTGGACTCAGGAATGGTaGCCCCGATGCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LPPLETEREHGIPGHTSIWTQEW*PRCQAV
Trigger: CACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCA...AATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GTTGACAAACACGTAAGCTGCCCTCCTGCAAAAGCCAACCAGAGAACAGGCAGGCCCATGCCCCGGGCATaGTCTGCTGTCAGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VDKHVSCPPAKANQRTGRPMPRA*SAVRVL
Trigger: CAAAACTCTGACAGCAGAGCATGCCCGGGGCATGGG...CCTGCCTGTTCTCTGGTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGAGGGGGTCTAGGCCCATaGCCCGGGCATGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRGGLGP*PGHALL
Trigger: CAGCAGAGCATGCCCGGGGCATGGGCCTAGACCCCC...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAGGGGGTCTAGGCCCATaGCCCGGGCATGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKGGLGP*PGHALL
Trigger: CAGCAGAGCATGCCCGGGGCATGGGCCTAGACCCCC...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp GGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCAGAGGAACATTACATTaGATGGCCACCATCAAGTTA +
Preference number: 4 (lower is better)
Translates to: GPGVNSGLLTSHVKWLPVRGTLH*MATIKL
Trigger: TAACTTGATGGTGGCCATGCAATGTAATGTTCCTCT...GACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGCCTGGCATCTCCAACTaGTGCCGAACCTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKPGISN*CRTWFS
Trigger: GGAGAACCAGGTTCGGCACCAGTTGGAGATGCCAGG...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGCCCTCTGGGGCCCTaGGGTGAACTCCGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKGPLGP*GELRAA
Trigger: AGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGGGCC...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GTCCTAAGCCAGGGGCCAACTGGACATTTTCCCAAAGGCTGGGCAGTATCATCTAAAAATGAGGCCCTCTaGGGCCCTGGGGTGAACTCC +
Preference number: 4 (lower is better)
Translates to: VLSQGPTGHFPKGWAVSSKNEAL*GPGVNS
Trigger: GGAGTTCACCCCAGGGCCCCAGAGGGCCTCATTTTT...AGATGATACTGCCCAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTTAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTTCGAAGGGAAATAAATaGTCCCTCGGGTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPSKGNK*SLGFLP
Trigger: AGGCAGAAACCCGAGGGACCATTTATTTCCCTTCGA...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CCTCTTGAACAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCTCTGCCTCTGCTCGTTaGGCCGGCGGTACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PLEQAFVIFCMDTNEPQTSASAR*AGGTSP
Trigger: GGGAGAAGTACCGCCGGCTCAACGAGCAGAGGCAGA...GGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTGTTCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTAGACCTAGAAGTCTGTaGACGATGTTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPRPRSL*TMFSTF
Trigger: GAAAGTGCTGAACATCGTTCACAGACTTCTAGGTCT...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTAGATGCTATAATGGATaGTGGATATGGAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GPWGELRAADIPREVAPSRCYNG*WIWKAK
Trigger: TTTTGCCTTCCATATCCATCATCCATTATAGCATCT...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCAATATTAAAAATCCATaGCTTGGGAGTAAACGGAGC +
Preference number: 4 (lower is better)
Translates to: GPGVNSGLLTSHVKWLPVNIKNP*LGSKRS
Trigger: GCTCCGTTTACTCCCAAGTCATGGATTTTTAATATT...GACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AAGCCCTACCATTTCAAACTCCTTGTGGAGAGTCCTAAGCCAGGGGCCAACTGGCCTCTGCTCTGTCCCTaGAGTCACTCATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KPYHFKLLVESPKPGANWPLLCP*SHSSRL
Trigger: CAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGG...CCAGTTGGCCCCTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGTAGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTGGAGAAAGCCTCTGCTCTGTCCCTaGAGTCACTCATCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LPLLLYLCKVDLYRVWRKPLLCP*SHSSRL
Trigger: CAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGG...CTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGGCAGGCTGCTGCCTCTaGCGGGACCAGCATGGAGCA +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKAGCCL*RDQHGA
Trigger: TGCTCCATGCTGGTCCCGGCAGAGGCAGCAGCCTGC...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTATCTTCAGCAGCGGCTaGAGGTGGTCGTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSIFSSG*RWSWCV
Trigger: GACACACCACGACCACCTGCAGCCGCTGCTGAAGAT...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGCCCTACCATTTCAAACTCCTTGTGGAGAGTCCTAAGCCAGGGGCCAACTGGGAGTACAACAGCATCTaGCTCTGCTCGTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: KPYHFKLLVESPKPGANWEYNSI*LCSLSR
Trigger: CCGGCTCAACGAGCAGAGGCAGATGCTGTTGTACTC...CCAGTTGGCCCCTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGTAGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGCCCTACCATTTCAAACTCCTTGTGGAGAGTCCTAAGCCAGGGGCCAACTGGCCTGAAACATGGCACTaGCTCACTGGCACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KPYHFKLLVESPKPGANWPETWH*LTGTFS
Trigger: GGAGAACGTGCCAGTGAGGCAGTGCCATGTTTCAGG...CCAGTTGGCCCCTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGTAGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAGGCTCCCAGTCCTGTTaGCTCCTCCTACGGGCAACA +
Preference number: 4 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEEGSQSC*LLLRAT
Trigger: TGTTGCCCGTAGGAGGAGCCAACAGGACTGGGAGCC...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTAGGCCCTCTGGGGCCCTaGGGTGAACTCCGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLGPLGP*GELRAA
Trigger: AGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGGGCC...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCGGCCCTCTGGGGCCCTaGGGTGAACTCCGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSGPLGP*GELRAA
Trigger: AGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGGGCC...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAACACGGCCACCACCTaGTCCTCCTCCACGTCGCCC +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHNTATT*SSSTSP
Trigger: GGGCGACGTGGAGGAGGACCAGGTGGTGGCCGTGTT...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCTGGCACGTTCTCCTCTaGGGCCACCCATACCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTWHVLL*GHPYPG
Trigger: GCCAGGGTATGGGTGGCCCCAGAGGAGAACGTGCCA...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAAGGCCCGGCAGGAGATaGTGGCAGAAGGTGTCACAC +
Preference number: 4 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEERPGRR*WQKVSH
Trigger: GTGTGACACCTTCTGCCACCATCTCCTGCCGGGCCT...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGCCCGATGCCAGGCAGTaGAACGTTGGCCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVPDARQ*NVGQAA
Trigger: TGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGG...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAATCTGCCTCTGCTCGTTaGGCCGGCGGTACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKSASAR*AGGTSP
Trigger: GGGAGAAGTACCGCCGGCTCAACGAGCAGAGGCAGA...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp AAGCCCTACCATTTCAAACTCCTTGTGGAGAGTCCTAAGCCAGGGGCCAACTGGAGCCAGCTGGGTGTGTaGTCTTCATCTCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: KPYHFKLLVESPKPGANWSQLGV*SSSQGT
Trigger: TGTACCCTGAGATGAAGATCACACACCCAGCTGGCT...CCAGTTGGCCCCTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGTAGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CATATAGAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCAGCCCAAGGCCCCTATaGCCTGAAACATGGCACTGC +
Preference number: 4 (lower is better)
Translates to: HIEGSEQKCLKQLLPADSSPRPL*PETWHC
Trigger: GCAGTGCCATGTTTCAGGTCATAGGGGCCTTGGGCT...GGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTCTATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGGGCATGAGATCAGGCTaGCAGCTTCACAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKGMRSG*QLHRRT
Trigger: AGTTCTCCTGTGAAGCTGTCAGCCTGATCTCATGCC...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTTCCCAGGTGGGACACTaGCACTGGAATGGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSSQVGH*HWNGLY
Trigger: GTAGAGACCATTCCAGTGTCAGTGTCCCACCTGGGA...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAATTGAATGGTGCCCCCGATaGCAGGCAGTGAAACGTTGG +
Preference number: 4 (lower is better)
Translates to: EGSEQKCLKQLLPADSLIEWCPR*QAVKRW
Trigger: CCAACGTTTCACTGCCTGGCATCGGGGGCACCATTC...AATTAGGGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTACTTCATTCTCACCCTaGTATGTTTACACCAGCACT +
Preference number: 4 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPTSFSP*YVYTST
Trigger: AGTGCTGGTGTAAACATAGCAGGGTGAGAATGAAGT...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CCTCTGGGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTTCAGGGCAAAATCTATaGAGTGTCTTACTAATTTCA +
Preference number: 4 (lower is better)
Translates to: PLGPWGELRAADIPREVASGQNL*SVLLIS
Trigger: TGAAATTAGTAAGACACTGCATAGATTTTGCCCTGA...AGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAAGCTCCGGTCTCCTTaGGGGTCTAGGCCCATGCCC +
Preference number: 4 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQKLRSP*GSRPMP
Trigger: GGGCATGGGCCTAGACCCCCAAGGAGACCGGAGCTT...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTTCCAATATCCTAACATaGCAGGACACAAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPSNILT*QDTKPR
Trigger: CCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGA...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CCTCTGGGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCAATCATTTCCAAACTaGCACATAGTTCATTTCACA +
Preference number: 4 (lower is better)
Translates to: PLGPWGELRAADIPREVAQSFPN*HIVHFT
Trigger: TGTGAAATGAACTATGTGCCAGTTTGGAAATGATTG...AGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGAAGCCAGGGGCCAACTaGACATTTTCCCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKKPGAN*TFSQRL
Trigger: CAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTT...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 72 bp AGGGCTGGCCATTTGGCAGAATCCAAGCCTACTAGCTaGGGATCTACTAGGGAGATAAAAGCCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: RAGHLAESKPTS*GSTREIKAHAW
Trigger: CCAGGCATGGGCTTTTATCTCCCTAGTAGATCCCAAGCTAGTAGGCTTGGATTCTGCCAAATGGCCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTGGGCACACCAGTATTAGCCAGCTGGGTGTGTaGTCTTCATCTCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: LPPLETEREHGIPGHTSISQLGV*SSSQGT
Trigger: TGTACCCTGAGATGAAGATCACACACCCAGCTGGCT...AATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTGGCATGAGATCAGGCTaGCAGCTTCACAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSGMRSG*QLHRRT
Trigger: AGTTCTCCTGTGAAGCTGTCAGCCTGATCTCATGCC...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAATTGGCATCTCCAACTGGTaGCGAACCTGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: EGSEQKCLKQLLPADSLIGISNW*RTWFSK
Trigger: CTTGGAGAACCAGGTTCGGCACCAGTTGGAGATGCC...AATTAGGGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTGCAGGCTGCTGCCTCTaGCGGGACCAGCATGGAGCA +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSAAGCCL*RDQHGA
Trigger: TGCTCCATGCTGGTCCCGGCAGAGGCAGCAGCCTGC...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGTGGACTCAGGAATGGTaGCCCCGATGCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKWTQEW*PRCQAV
Trigger: CACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCA...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGAACAGCATCTGCCTCTaGTCGTTGAGCCGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVNSICL*SLSRRY
Trigger: GTACCGCCGGCTCAACGAGCAGAGGCAGATGCTGTT...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp CATATAGAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCGAGTACAACAGCATCTaGCTCTGCTCGTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: HIEGSEQKCLKQLLPADSEYNSI*LCSLSR
Trigger: CCGGCTCAACGAGCAGAGGCAGATGCTGTTGTACTC...GGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTCTATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTGGGCACACCAGTATTGGCTCAGAGCAGAAATaGCTCAAACAGCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: LPPLETEREHGIPGHTSIGSEQK*LKQLLP
Trigger: CGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCC...AATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACTCTCCACGGGCATGTTaGCAAAGCAGGCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHSPRAC*QSRPGR
Trigger: TCGGCCTGGCCTGCTTTGCCAACATGCCCGTGGAGA...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCTCCACGGGCATGTTaGCAAAGCAGGCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: ASQSIPWAIQFRREINGPSPRAC*QSRPGR
Trigger: TCGGCCTGGCCTGCTTTGCCAACATGCCCGTGGAGA...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AAGCCCTACCATTTCAAACTCCTTGTGGAGAGTCCTAAGCCAGGGGCCAACTGGATGAGAGTAATGTCCTaGCATCTCCAACTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: KPYHFKLLVESPKPGANWMRVMS*HLQLVP
Trigger: CGGCACCAGTTGGAGATGCCAGGACATTACTCTCAT...CCAGTTGGCCCCTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGTAGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACCTGCCGGGACCAGCATaGAGCACCCCCTTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHLPGPA*STPFLS
Trigger: GGACAAAAAGGGGGTGCTCCATGCTGGTCCCGGCAG...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCGTTTGGACTCAGGAATaGTGCCCCCGATGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTVWTQE*CPRCQA
Trigger: TGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAAC...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CCTCTTGAACAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCGTTTGGACTCAGGAATaGTGCCCCCGATGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PLEQAFVIFCMDTNEPQTVWTQE*CPRCQA
Trigger: TGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAAC...GGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTGTTCAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AAGCCCTACCATTTCAAACTCCTTGTGGAGAGTCCTAAGCCAGGGGCCAACTGGAGACATGCAGCCAGCTaGGTGTGTGATCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: KPYHFKLLVESPKPGANWRHAAS*VCDLHL
Trigger: GAGATGAAGATCACACACCCAGCTGGCTGCATGTCT...CCAGTTGGCCCCTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGTAGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GTTGACAAACACGTAAGCTGCCCTCCTGCAAAAGCCAACCAGAGAACAGGCAGGTTGGGGAGCAGAATCTaGCATAGAGCAAGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: VDKHVSCPPAKANQRTGRLGSRI*HRARLR
Trigger: TCGAAGCCTTGCTCTATGCCAGATTCTGCTCCCCAA...CCTGCCTGTTCTCTGGTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACGGATGCCCTGTCACTaGAGTGCGAACACCACTGTG +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKRMPCH*SANTTV
Trigger: CACAGTGGTGTTCGCACTTCAGTGACAGGGCATCCG...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS-3UTR TCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGCCCTGTCAGCACTGTTaGTCTTCAGCAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGPCQHC*SSAAAA
Trigger: TGCAGCCGCTGCTGAAGATCAACAGTGCTGACAGGG...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp GCTCAGCCTACTCCTAGTGATACAACTCCCATGACCAAGCCCAGAGGACCAGCAACCATCAAGTTACTTTaGGGAAGGTTTCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: AQPTPSDTTPMTKPRGPATIKLL*GRFPGF
Trigger: GAAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGT...TGCTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCACTAGGAGTAGGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGCGGGGGTCGAAGGTaGCCACGAACACGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLSGGRR*PRTRPP
Trigger: TGGTGGCCGTGTTCGTGGTCACCTTCGACCCCCGCT...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGCCCTGGCCCTCTGCATaGGCAGGAGGGTGGACACGT +
Preference number: 4 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLPWPSA*AGGWTR
Trigger: ACGTGTCCACCCTCCTGCTCATGCAGAGGGCCAGGG...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCTCCCAGGTGGGACACTaGCACTGGAATGGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTSQVGH*HWNGLY
Trigger: GTAGAGACCATTCCAGTGTCAGTGTCCCACCTGGGA...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGGCCCTGTCACTGAAGTaGGAACACCACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGALSLK*EHHCGA
Trigger: AGCCCCACAGTGGTGTTCGCACTTCAGTGACAGGGC...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS-3UTR GCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACGAATGGTGCCCCCGATaGCAGGCAGTGAAACGTTGG +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHEWCPR*QAVKRW
Trigger: CCAACGTTTCACTGCCTGGCATCGGGGGCACCATTC...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGATCTTCAGCAGCGGCTaGAGGTGGTCGTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKIFSSG*RWSWCV
Trigger: GACACACCACGACCACCTGCAGCCGCTGCTGAAGAT...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAACAGCATCTGCCTCTaGTCGTTGAGCCGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQNSICL*SLSRRY
Trigger: GTACCGCCGGCTCAACGAGCAGAGGCAGATGCTGTT...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGAACAGCATCTGCCTCTaGTCGTTGAGCCGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKNSICL*SLSRRY
Trigger: GTACCGCCGGCTCAACGAGCAGAGGCAGATGCTGTT...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTGACAAACACGTAAGCTaGCCTCCTGCAAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSDKHVS*PPAKAN
Trigger: GTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTC...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTCAGGCAGTGAAACGTTaGCCAAGCAGCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QSIPWAIQFRREINGPSGQAVKR*PSSSSS
Trigger: ACTGCTGCTGCTGCTTGGCCAACGTTTCACTGCCTG...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAGTTTGGACTCAGGAATaGTGCCCCCGATGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKVWTQE*CPRCQA
Trigger: TGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAAC...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCAAGCTCCGGTCTCCTTaGGGGTCTAGGCCCATGCCC +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLKLRSP*GSRPMP
Trigger: GGGCATGGGCCTAGACCCCCAAGGAGACCGGAGCTT...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAAAAATGAGGCCCTCTaGGGCCCTGGGGTGAACTCC +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHKNEAL*GPGVNS
Trigger: GGAGTTCACCCCAGGGCCCCAGAGGGCCTCATTTTT...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGCTGTGTACATTAGTCTaGCTGGGTGTTGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKLCTLV*LGVGHR
Trigger: TCTGTGACCAACACCCAGCCAGACTAATGTACACAG...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTGGAGAAAGCTTCTGCTGCCACTGTaGAATTCCCTAGTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LPLLLYLCKVDLYRVWRKLLLPL*NSLVEN
Trigger: GTTCTCTACTAGGGAATTCCACAGTGGCAGCAGAAG...CTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGCCCGGCAGGAGATGGTaGCAGAAGGTGTCACACCAC +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKPGRRW*QKVSHH
Trigger: GTGGTGTGACACCTTCTGCCACCATCTCCTGCCGGG...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GTTGACAAACACGTAAGCTGCCCTCCTGCAAAAGCCAACCAGAGAACAGGCAGGCTCCCCCTAACCAGGTaGAAGCACAGATGCTATAAT +
Preference number: 4 (lower is better)
Translates to: VDKHVSCPPAKANQRTGRLPLTR*KHRCYN
Trigger: ATTATAGCATCTGTGCTTCCACCTGGTTAGGGGGAG...CCTGCCTGTTCTCTGGTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGAGAGAGGGGATGGGACTaGGGTCAGCAGGATTCTCAC +
Preference number: 4 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRERGWD*GQQDSH
Trigger: GTGAGAATCCTGCTGACCCCAGTCCCATCCCCTCTC...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 72 bp TCATCCACCTGCCCCTCCTCCTTTACCTCTGCAAGGTaGACCTATACAGGGTCTGGAGAAAGCATCTCAATC +
Preference number: 4 (lower is better)
Translates to: SSTCPSSFTSAR*TYTGSGESISI
Trigger: GATTGAGATGCTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAGGTGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGCCCGATGCCAGGCAGTaGAACGTTGGCCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEPDARQ*NVGQAA
Trigger: TGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGG...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCCCCGATGCCAGGCAGTaGAACGTTGGCCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLPDARQ*NVGQAA
Trigger: TGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGG...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGCCCTGTCAGCACTGTTaGTCTTCAGCAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKPCQHC*SSAAAA
Trigger: TGCAGCCGCTGCTGAAGATCAACAGTGCTGACAGGG...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACTCTGCCTCTGCTCGTTaGGCCGGCGGTACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNSASAR*AGGTSP
Trigger: GGGAGAAGTACCGCCGGCTCAACGAGCAGAGGCAGA...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAGTCAGAGTTTTGTCTTaGCTGGCAGACACCTCCAAC +
Preference number: 4 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEEVRVLS*LADTSN
Trigger: GTTGGAGGTGTCTGCCAGTCAAGACAAAACTCTGAC...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACGTGATACAACTCCCATaGCCAAGCCCAGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHVIQLP*PSPEDQ
Trigger: CTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCAC...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp TTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTGGGCACACCAGTATTAGATTTCTGGTCCTATaGAGAAGCTGGCAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LPPLETEREHGIPGHTSIRFLVL*RSWQGR
Trigger: CCTACCTTGCCAGCTTCTTCATAGGACCAGAAATCT...AATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAAGGCAAGACATACTCTaGGGATGCTCAACAGTGGCA +
Preference number: 4 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEERQDIL*GCSTVA
Trigger: TGCCACTGTTGAGCATCCTCAGAGTATGTCTTGCCT...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GTTGACAAACACGTAAGCTGCCCTCCTGCAAAAGCCAACCAGAGAACAGGCAGGGCAATCATAATTTACTaGGGACTGTACAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VDKHVSCPPAKANQRTGRAIIIY*GLYRSQ
Trigger: CTGGGACCTGTACAGTCCTCAGTAAATTATGATTGC...CCTGCCTGTTCTCTGGTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAAGGTTTCCAGGCTGCCCTGTCACTGAAGTaGGAACACCACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: EHYIAWPPSSYFEEGFQAALSLK*EHHCGA
Trigger: AGCCCCACAGTGGTGTTCGCACTTCAGTGACAGGGC...AGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS-3UTR GCA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAGGCATCTCCAACTGGTaGCGAACCTGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQGISNW*RTWFSK
Trigger: CTTGGAGAACCAGGTTCGGCACCAGTTGGAGATGCC...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGGGCATCTCCAACTGGTaGCGAACCTGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKGISNW*RTWFSK
Trigger: CTTGGAGAACCAGGTTCGGCACCAGTTGGAGATGCC...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGAATGGTGCCCCCGATaGCAGGCAGTGAAACGTTGG +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKEWCPR*QAVKRW
Trigger: CCAACGTTTCACTGCCTGGCATCGGGGGCACCATTC...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp GAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAAGGTTTCCAGGCTATCTTCAGCAGCGGCTaGAGGTGGTCGTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: EHYIAWPPSSYFEEGFQAIFSSG*RWSWCV
Trigger: GACACACCACGACCACCTGCAGCCGCTGCTGAAGAT...AGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGGAGTACAACAGCATCTaGCTCTGCTCGTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKEYNSI*LCSLSR
Trigger: CCGGCTCAACGAGCAGAGGCAGATGCTGTTGTACTC...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACGCCCCGGGCATGCTCTaGTGTCAGAGTTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHAPGML*CQSFVL
Trigger: CAAGACAAAACTCTGACAGCAGAGCATGCCCGGGGC...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGCCCTACCATTTCAAACTCCTTGTGGAGAGTCCTAAGCCAGGGGCCAACTGGGCCTTTGTCATATTTTaGATGGATACCAACGAGCCC +
Preference number: 4 (lower is better)
Translates to: KPYHFKLLVESPKPGANWAFVIF*MDTNEP
Trigger: GGGCTCGTTGGTATCCATGCAAAATATGACAAAGGC...CCAGTTGGCCCCTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGTAGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAAGGTTTCCAGGCTCCTGGCATCTCCAACTaGTGCCGAACCTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: EHYIAWPPSSYFEEGFQAPGISN*CRTWFS
Trigger: GGAGAACCAGGTTCGGCACCAGTTGGAGATGCCAGG...AGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAACAGGCAGTGAAACGTTaGCCAAGCAGCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQQAVKR*PSSSSS
Trigger: ACTGCTGCTGCTGCTTGGCCAACGTTTCACTGCCTG...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACGGCTGCAGGTGGTCGTaGTGTGTCTTCACATTCTGG +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHGCRWS*CVFTFW
Trigger: CCAGAATGTGAAGACACACCACGACCACCTGCAGCC...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGAGGCTGCAGGTGGTCGTaGTGTGTCTTCACATTCTGG +
Preference number: 4 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRGCRWS*CVFTFW
Trigger: CCAGAATGTGAAGACACACCACGACCACCTGCAGCC...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACACATCCCACGTGAAGTaGCTCCCAGTCCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHTSHVK*LPVLLA
Trigger: AGCCAACAGGACTGGGAGCCACTTCACGTGGGATGT...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAGAGGACCAGCAGCTCTaGGAGAAAGTGGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKEDQQL*EKVADS
Trigger: GGAATCTGCCACTTTCTCCCAGAGCTGCTGGTCCTC...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAATTCTCCAAGGCCAGCATTaGCCCTTAGCAATTCACCAA +
Preference number: 4 (lower is better)
Translates to: EGSEQKCLKQLLPADSLILQGQH*PLAIHQ
Trigger: TTGGTGAATTGCTAAGGGCCAATGCTGGCCTTGGAG...AATTAGGGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAGGAGAAGTTCTGCATTaGGGTCAGCTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKGEVLH*GQLSPR
Trigger: CCTTGGGCTCAGCTGACCCCAATGCAGAACTTCTCC...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTGGAGAAAGTCTGCACAAGATTTCTaGTCCTATGAAGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LPLLLYLCKVDLYRVWRKSAQDF*SYEEAG
Trigger: GCCAGCTTCTTCATAGGACCAGAAATCTTGTGCAGA...CTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCAAGCCAGGGGCCAACTaGACATTTTCCCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTKPGAN*TFSQRL
Trigger: CAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTT...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTGGGCACACCAGTATTCTCCCCCTAACCAGGTaGAAGCACAGATGCTATAAT +
Preference number: 4 (lower is better)
Translates to: LPPLETEREHGIPGHTSILPLTR*KHRCYN
Trigger: ATTATAGCATCTGTGCTTCCACCTGGTTAGGGGGAG...AATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCCCCTGTCAGCACTGTTaGTCTTCAGCAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLPCQHC*SSAAAA
Trigger: TGCAGCCGCTGCTGAAGATCAACAGTGCTGACAGGG...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTACCCTGTCAGCACTGTTaGTCTTCAGCAGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLPCQHC*SSAAAA
Trigger: TGCAGCCGCTGCTGAAGATCAACAGTGCTGACAGGG...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTACCACACAGACTTTCTaGACAGTCCATCCCAATGTT +
Preference number: 4 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSTTQTF*TVHPNV
Trigger: AACATTGGGATGGACTGTTCAGAAAGTCTGTGTGGT...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTGGCTTTCTAACTGGTTaGCAAACACGTAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QSIPWAIQFRREINGPSGGFLTG*QTRKLP
Trigger: GGGCAGCTTACGTGTTTGTCAACCAGTTAGAAAGCC...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AAGCCCTACCATTTCAAACTCCTTGTGGAGAGTCCTAAGCCAGGGGCCAACTGGTACACATTACTGAAATaGCAGCAACCCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: KPYHFKLLVESPKPGANWYTLLK*QQPTLQ
Trigger: CTGCAATGTGGGTTGCTGTCATTTCAGTAATGTGTA...CCAGTTGGCCCCTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGTAGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGGGACACGTGGAGATGTaGGACAGAAAGCTACCGAGA +
Preference number: 4 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGGHVEM*DRKLPR
Trigger: TCTCGGTAGCTTTCTGTCTCACATCTCCACGTGTCC...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTAGCCCAAGGCCCCTATaGCCTGAAACATGGCACTGC +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSASPRPL*PETWHC
Trigger: GCAGTGCCATGTTTCAGGTCATAGGGGCCTTGGGCT...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGCAAGGCTTCGAAAGGTaGTTTCCGAAGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGQGFER*FPKPQA
Trigger: AGCCTGTGGCTTCGGAAATCACCTTTCGAAGCCTTG...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGACAAGGCTTCGAAAGGTaGTTTCCGAAGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRQGFER*FPKPQA
Trigger: AGCCTGTGGCTTCGGAAATCACCTTTCGAAGCCTTG...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGTCAGTGCATCAAGACTaGGAGCAAATTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKSVHQD*EQIHPH
Trigger: ATGAGGATGAATTTGCTCTCAGTCTTGATGCACTGA...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GCTCAGCCTACTCCTAGTGATACAACTCCCATGACCAAGCCCAGAGGACCAGCAAGTCCACTGCCAAGCTaGGCATTATCCTATTTTATT +
Preference number: 4 (lower is better)
Translates to: AQPTPSDTTPMTKPRGPASPLPS*ALSYFI
Trigger: AATAAAATAGGATAATGCTCAGCTTGGCAGTGGACT...TGCTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCACTAGGAGTAGGCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTCATCCCCACATTCGCTaGCTGGCCTTAGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: QSIPWAIQFRREINGPSGHPHIR*LALESK
Trigger: TTTGCTTTCTAAGGCCAGTCAGCGAATGTGGGGATG...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CTGGTAGCAAAGGATCCTAGGTTGTGCCTGTTAATCTGTCATGTTGGGGAGCAGCCACCATTCTTCACTTaGCAGTCTTTGTGGACACGT +
Preference number: 4 (lower is better)
Translates to: LVAKDPRLCLLICHVGEQPPFFT*QSLWTR
Trigger: ACGTGTCCACAAAGACTGTCAAGTGAAGAATGGTGG...CTGCTCCCCAACATGACAGATTAACAGGCACAACCTAGGATCCTTTGCTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGAGGAGGGAGAGAGGATaGCCACAGACTTCATCCGCG +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFERRERG*PQTSSA
Trigger: CGCGGATGAAGTCTGTGGGCATCCTCTCTCCCTCCT...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp AACCTCTTTCATTCTGACCATAAGATAAGCTCATATTTGGTGTCAGAAACATCCGCAGGCTGCTGCCTCTaGCGGGACCAGCATGGAGCA +
Preference number: 4 (lower is better)
Translates to: NLFHSDHKISSYLVSETSAGCCL*RDQHGA
Trigger: TGCTCCATGCTGGTCCCGGCAGAGGCAGCAGCCTGC...GGATGTTTCTGACACCAAATATGAGCTTATCTTATGGTCAGAATGAAAGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAATATCTTCTCTGTGGTaGAGGCCACATAGGACACCT +
Preference number: 4 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEEISSLW*RPHRTP
Trigger: AGGTGTCCTATGTGGCCTGCACCACAGAGAAGATAT...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCATCTTCAGCAGCGGCTaGAGGTGGTCGTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLIFSSG*RWSWCV
Trigger: GACACACCACGACCACCTGCAGCCGCTGCTGAAGAT...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGCCCATGCCCCGGGCATaGTCTGCTGTCAGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEPMPRA*SAVRVL
Trigger: CAAAACTCTGACAGCAGAGCATGCCCGGGGCATGGG...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGAGGCTCAGAGCAGAAATaGCTCAAACAGCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRGSEQK*LKQLLP
Trigger: CGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCC...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGGCCAAGCAGAGGCTCTaGACAAGATTTCTGGTCCTA +
Preference number: 4 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLAKQRL*TRFLVL
Trigger: TAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGC...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAATGGCTCCTAGCTTCTaGTGCCACTGTGGAATTCCC +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKMAPSF*CHCGIP
Trigger: GGGAATTCCACAGTGGCAGCAGAAGCTAGGAGCCAT...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCATGAGAGTAATGTCCTaGCATCTCCAACTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTMRVMS*HLQLVP
Trigger: CGGCACCAGTTGGAGATGCCAGGACATTACTCTCAT...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACCTGCCGGGACCAGCATaGAGCACCCCCTTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNLPGPA*STPFLS
Trigger: GGACAAAAAGGGGGTGCTCCATGCTGGTCCCGGCAG...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGACATGTATCGGTGGATaGAAGGCAGCCAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVTCIGG*KAASRQ
Trigger: CTGTCTACTGGCTGCCTTCCATCCACCGATACATGT...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGCAGGCAGTGAAACGTTaGCCAAGCAGCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKQAVKR*PSSSSS
Trigger: ACTGCTGCTGCTGCTTGGCCAACGTTTCACTGCCTG...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAACGAATATCTTCTCTGTaGTGCAGGCCACATAGGACA +
Preference number: 4 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEERISSL*CRPHRT
Trigger: TGTCCTATGTGGCCTGCACCACAGAGAAGATATTCG...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGGGCTCCCAGTCCTGTTaGCTCCTCCTACGGGCAACA +
Preference number: 4 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLGSQSC*LLLRAT
Trigger: TGTTGCCCGTAGGAGGAGCCAACAGGACTGGGAGCC...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCAAAAATGAGGCCCTCTaGGGCCCTGGGGTGAACTCC +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLKNEAL*GPGVNS
Trigger: GGAGTTCACCCCAGGGCCCCAGAGGGCCTCATTTTT...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CTGCCCCTCCTCCTTTACCTCTGCAAGGTTGACCTATACAGGGTCTGGAGAAAGTCCAATATCCTAACATaGCAGGACACAAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: LPLLLYLCKVDLYRVWRKSNILT*QDTKPR
Trigger: CCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGA...CTTTCTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAGGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAATCGACCCACAGGAACTaGCTTTCTAACTGGTTGACA +
Preference number: 4 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEESTHRN*LSNWLT
Trigger: TGTCAACCAGTTAGAAAGCCAGTTCCTGTGGGTCGA...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGAGGAGGGTGGACACGTaGAGATGTGAGACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGRRVDT*RCETES
Trigger: GCTTTCTGTCTCACATCTCCACGTGTCCACCCTCCT...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTGGCACGTTCTCCTCTaGGGCCACCCATACCCTGGC +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQWHVLL*GHPYPG
Trigger: GCCAGGGTATGGGTGGCCCCAGAGGAGAACGTGCCA...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGAGAAGTTCTGCATTaGGGTCAGCTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKGEVLH*GQLSPR
Trigger: CCTTGGGCTCAGCTGACCCCAATGCAGAACTTCTCC...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAATTCATTTTCCCAAAGGCTaGGCAGTATCATCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: EGSEQKCLKQLLPADSLIHFPKG*AVSSAE
Trigger: CTCAGCAGATGATACTGCCCAGCCTTTGGGAAAATG...AATTAGGGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CATATAGAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCGACACAAAACCAAGGTaGTCTCACCTTATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: HIEGSEQKCLKQLLPADSDTKPR*SHLISR
Trigger: CCTAGAGATAAGGTGAGATCACCTTGGTTTTGTGTC...GGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTCTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAATTACCATCAAGTTACTTTaGGGAAGGTTTCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: EGSEQKCLKQLLPADSLITIKLL*GRFPGF
Trigger: GAAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGT...AATTAGGGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAAAGAACTTTATAAACTaGGACATGCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEEKNFIN*DMQPAG
Trigger: CCCAGCTGGCTGCATGTCTCAGTTTATAAAGTTCTT...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGGACCACTGTCCCGGGTaGAGGCACTGCCACATTTTC +
Preference number: 4 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLDHCPG*RHCHIF
Trigger: GAAAATGTGGCAGTGCCTTCACCCGGGACAGTGGTC...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACGGCTTTCTAACTGGTTaGCAAACACGTAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHGFLTG*QTRKLP
Trigger: GGGCAGCTTACGTGTTTGTCAACCAGTTAGAAAGCC...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTAAAGGCCCCTATGACCTaGAACATGGCACTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLKAPMT*NMALPH
Trigger: GTGAGGCAGTGCCATGTTTCAGGTCATAGGGGCCTT...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGAGGCAAGACATACTCTaGGGATGCTCAACAGTGGCA +
Preference number: 4 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGRQDIL*GCSTVA
Trigger: TGCCACTGTTGAGCATCCTCAGAGTATGTCTTGCCT...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GCTCAGCCTACTCCTAGTGATACAACTCCCATGACCAAGCCCAGAGGACCAGCAAATATTAAAAATCCATaGCTTGGGAGTAAACGGAGC +
Preference number: 4 (lower is better)
Translates to: AQPTPSDTTPMTKPRGPANIKNP*LGSKRS
Trigger: GCTCCGTTTACTCCCAAGTCATGGATTTTTAATATT...TGCTGGTCCTCTGGGCTTGGTCATGGGAGTTGTATCACTAGGAGTAGGCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAGTACAACAGCATCTaGCTCTGCTCGTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEEYNSI*LCSLSR
Trigger: CCGGCTCAACGAGCAGAGGCAGATGCTGTTGTACTC...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCGCCCCGGGCATGCTCTaGTGTCAGAGTTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLAPGML*CQSFVL
Trigger: CAAGACAAAACTCTGACAGCAGAGCATGCCCGGGGC...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACCCCATGCCCCGGGCATaGTCTGCTGTCAGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNPMPRA*SAVRVL
Trigger: CAAAACTCTGACAGCAGAGCATGCCCGGGGCATGGG...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp TTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTGGGCACACCAGTATTACTTCATTCTCACCCTaGTATGTTTACACCAGCACT +
Preference number: 4 (lower is better)
Translates to: LPPLETEREHGIPGHTSITSFSP*YVYTST
Trigger: AGTGCTGGTGTAAACATAGCAGGGTGAGAATGAAGT...AATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCACATACCCTGGCCCTCTaGATGAGCAGGAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPHTLAL*MSRRVD
Trigger: GTCCACCCTCCTGCTCATGCAGAGGGCCAGGGTATG...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTACCTGAAACATGGCACTaGCTCACTGGCACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLPETWH*LTGTFS
Trigger: GGAGAACGTGCCAGTGAGGCAGTGCCATGTTTCAGG...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACGCCAAGCAGAGGCTCTaGACAAGATTTCTGGTCCTA +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHAKQRL*TRFLVL
Trigger: TAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGC...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCCTCCTCCTTTACCTCTaGAAGGTTGACCTATACAGG +
Preference number: 4 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTLLLYL*KVDLYR
Trigger: CCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAG...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGCTCCTCCTTTACCTCTaGAAGGTTGACCTATACAGG +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVLLLYL*KVDLYR
Trigger: CCTGTATAGGTCAACCTTGCAGAGGTAAAGGAGGAG...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTGGTAGCAAAGGATCCTAGGTTGTGCCTGTTAATCTGTCATGTTGGGGAGCAGTCAGATTGGATTTTATaGGACCCACTGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: LVAKDPRLCLLICHVGEQSDWIL*DPLAID
Trigger: GTCTATGGCCAGTGGGTCCCATAAAATCCAATCTGA...CTGCTCCCCAACATGACAGATTAACAGGCACAACCTAGGATCCTTTGCTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGAACTGGTGCCGAACCTaGTTCTCCAAGAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKNWCRT*FSKKCM
Trigger: CATGCACTTCTTGGAGAACCAGGTTCGGCACCAGTT...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGAACATGTATCGGTGGATaGAAGGCAGCCAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRTCIGG*KAASRQ
Trigger: CTGTCTACTGGCTGCCTTCCATCCACCGATACATGT...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAACATGTATCGGTGGATaGAAGGCAGCCAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQTCIGG*KAASRQ
Trigger: CTGTCTACTGGCTGCCTTCCATCCACCGATACATGT...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACGTTTGGACTCAGGAATaGTGCCCCCGATGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNVWTQE*CPRCQA
Trigger: TGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAAC...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGCGAATATCTTCTCTGTaGTGCAGGCCACATAGGACA +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVRISSL*CRPHRT
Trigger: TGTCCTATGTGGCCTGCACCACAGAGAAGATATTCG...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGGCTGCAGGTGGTCGTaGTGTGTCTTCACATTCTGG +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEGCRWS*CVFTFW
Trigger: CCAGAATGTGAAGACACACCACGACCACCTGCAGCC...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTAAGCTCCGGTCTCCTTaGGGGTCTAGGCCCATGCCC +
Preference number: 4 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFKLRSP*GSRPMP
Trigger: GGGCATGGGCCTAGACCCCCAAGGAGACCGGAGCTT...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGGGCTCCCAGTCCTGTTaGCTCCTCCTACGGGCAACA +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQGSQSC*LLLRAT
Trigger: TGTTGCCCGTAGGAGGAGCCAACAGGACTGGGAGCC...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTACATCCCACGTGAAGTaGCTCCCAGTCCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSATSHVK*LPVLLA
Trigger: AGCCAACAGGACTGGGAGCCACTTCACGTGGGATGT...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCACATCCCACGTGAAGTaGCTCCCAGTCCTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSTSHVK*LPVLLA
Trigger: AGCCAACAGGACTGGGAGCCACTTCACGTGGGATGT...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGAGACATGCAGCCAGCTaGGTGTGTGATCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKRHAAS*VCDLHL
Trigger: GAGATGAAGATCACACACCCAGCTGGCTGCATGTCT...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAACTCCAAGGCCAGCATTaGCCCTTAGCAATTCACCAA +
Preference number: 4 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQLQGQH*PLAIHQ
Trigger: TTGGTGAATTGCTAAGGGCCAATGCTGGCCTTGGAG...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTCTGTGTACATTAGTCTaGCTGGGTGTTGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: QSIPWAIQFRREINGPSGLCTLV*LGVGHR
Trigger: TCTGTGACCAACACCCAGCCAGACTAATGTACACAG...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCACCCGGCAGGAGATGGTaGCAGAAGGTGTCACACCAC +
Preference number: 4 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPPGRRW*QKVSHH
Trigger: GTGGTGTGACACCTTCTGCCACCATCTCCTGCCGGG...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCCATTTTCCCAAAGGCTaGGCAGTATCATCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTHFPKG*AVSSAE
Trigger: CTCAGCAGATGATACTGCCCAGCCTTTGGGAAAATG...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTAGAGCACGGCATACCTaGGCACACCAGTATTCAGGG +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSARARHT*AHQYSG
Trigger: CCCTGAATACTGGTGTGCCCAGGTATGCCGTGCTCT...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGTCAGAGTTTTGTCTTaGCTGGCAGACACCTCCAAC +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKVRVLS*LADTSN
Trigger: GTTGGAGGTGTCTGCCAGTCAAGACAAAACTCTGAC...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGGACACAAAACCAAGGTaGTCTCACCTTATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVDTKPR*SHLISR
Trigger: CCTAGAGATAAGGTGAGATCACCTTGGTTTTGTGTC...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGCCAGTAAATCTGTGTTaGCCCAGAGGTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEPVNLC*PRGAAA
Trigger: AGCAGCAGCACCTCTGGGTCAACACAGATTTACTGG...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCAGACCACTGTCCCGGGTaGAGGCACTGCCACATTTTC +
Preference number: 4 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPDHCPG*RHCHIF
Trigger: GAAAATGTGGCAGTGCCTTCACCCGGGACAGTGGTC...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGAGTGGCAAAGGTAACTaGAGAGATAAAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVSGKGN*RDKAHA
Trigger: AGCGTGTGCTTTATCTCTTCAGTTACCTTTGCCACT...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CCTCTTGAACAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCCTATTGATACATCAATaGTTTCAGCTTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PLEQAFVIFCMDTNEPQTLLIHQ*FQLPSP
Trigger: GGGGGAGGGAAGCTGAAATCATTGATGTATCAATAG...GGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTGTTCAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTCTTTTCTCGGAGGGTTaGTGTCCTAAAACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: QSIPWAIQFRREINGPSGLFSEG*CPKTES
Trigger: GCTTTCAGTTTTAGGACATCAACCCTCCGAGAAAAG...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTTGGACTCAGGAATGGTaGCCCCGATGCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFWTQEW*PRCQAV
Trigger: CACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCA...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACATATCTTCTCTGTGGTaGAGGCCACATAGGACACCT +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHISSLW*RPHRTP
Trigger: AGGTGTCCTATGTGGCCTGCACCACAGAGAAGATAT...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAATATCTTCTCTGTGGTaGAGGCCACATAGGACACCT +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKISSLW*RPHRTP
Trigger: AGGTGTCCTATGTGGCCTGCACCACAGAGAAGATAT...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTCATACCCTGGCCCTCTaGATGAGCAGGAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPHTLAL*MSRRVD
Trigger: GTCCACCCTCCTGCTCATGCAGAGGGCCAGGGTATG...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGTTTTATTCATCCACCTaGCCCTCCTCCTTTACCTCT +
Preference number: 4 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLFYSST*PSSFTS
Trigger: AGAGGTAAAGGAGGAGGGGCAGGTGGATGAATAAAA...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTGGGCACACCAGTATTAAAGGAAATTCATTTTaGTTTCCTCTGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LPPLETEREHGIPGHTSIKGNSF*FPLLCP
Trigger: GGGACAGAGCAGAGGAAAGCAAAATGAATTTCCTTT...AATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGATGAGAGTAATGTCCTaGCATCTCCAACTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKMRVMS*HLQLVP
Trigger: CGGCACCAGTTGGAGATGCCAGGACATTACTCTCAT...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACGAATATCTTCTCTGTaGTGCAGGCCACATAGGACA +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKRISSL*CRPHRT
Trigger: TGTCCTATGTGGCCTGCACCACAGAGAAGATATTCG...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGCGAATATCTTCTCTGTaGTGCAGGCCACATAGGACA +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKRISSL*CRPHRT
Trigger: TGTCCTATGTGGCCTGCACCACAGAGAAGATATTCG...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGGGCTGCAGGTGGTCGTaGTGTGTCTTCACATTCTGG +
Preference number: 4 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLGCRWS*CVFTFW
Trigger: CCAGAATGTGAAGACACACCACGACCACCTGCAGCC...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGGAACATTACATTGCATaGCCACCATCAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKEHYIA*PPSSYF
Trigger: AAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGCTTCTGCTGCCACTGTaGAATTCCCTAGTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGLLLPL*NSLVEN
Trigger: GTTCTCTACTAGGGAATTCCACAGTGGCAGCAGAAG...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CCTCTTGAACAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCTCTCAATCCATTCCCTaGGCTATACAGTTTCGAAGG +
Preference number: 4 (lower is better)
Translates to: PLEQAFVIFCMDTNEPQTSQSIP*AIQFRR
Trigger: CCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGA...GGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTGTTCAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 72 bp CCTGAACCTCAGGATACCACGAAAAATAACCATTACTaGACAGAAAGGACCCCTCAACCCTTGAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: PEPQDTTKNNHY*TERTPQPLRGK
Trigger: CTTGCCTCTCAAGGGTTGAGGGGTCCTTTCTGTCAAGTAATGGTTATTTTTCGTGGTATCCTGAGGTTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCTCAAGGTCAATATCTTaGGGTAAGCACCATTCTACC +
Preference number: 4 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTSRSIS*GKHHST
Trigger: GGTAGAATGGTGCTTACCTCAAGATATTGACCTTGA...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTGGAACCCAGAAGCCCTaGCTCACCATTCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSAGTQKP*LTIQRK
Trigger: TTTCCTTTGAATGGTGAGTCAGGGCTTCTGGGTTCC...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTAGGAACCCAGAAGCCCTaGCTCACCATTCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLGTQKP*LTIQRK
Trigger: TTTCCTTTGAATGGTGAGTCAGGGCTTCTGGGTTCC...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGAGACCTAGAAGTCTGTaGACGATGTTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGRPRSL*TMFSTF
Trigger: GAAAGTGCTGAACATCGTTCACAGACTTCTAGGTCT...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCTTTCACAGTGTGGCATaGGATCAGGCTGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSFHSVA*DQADSF
Trigger: GAAGCTGTCAGCCTGATCTCATGCCACACTGTGAAA...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTTTACCTCTGCAAGGTTaGCCTATACAGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSALPLQG*PIQGLE
Trigger: CTCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAA...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CTGGTAGCAAAGGATCCTAGGTTGTGCCTGTTAATCTGTCATGTTGGGGAGCAGAGTCCACTGCCAAGCTaGGCATTATCCTATTTTATT +
Preference number: 4 (lower is better)
Translates to: LVAKDPRLCLLICHVGEQSPLPS*ALSYFI
Trigger: AATAAAATAGGATAATGCTCAGCTTGGCAGTGGACT...CTGCTCCCCAACATGACAGATTAACAGGCACAACCTAGGATCCTTTGCTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCAGCCCCGGGCATGCTCTaGTGTCAGAGTTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPAPGML*CQSFVL
Trigger: CAAGACAAAACTCTGACAGCAGAGCATGCCCGGGGC...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTCCCATGCCCCGGGCATaGTCTGCTGTCAGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPPMPRA*SAVRVL
Trigger: CAAAACTCTGACAGCAGAGCATGCCCGGGGCATGGG...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAAGGTTTCCAGGCTGTGGCTTCTCCATCCTaGTCGAACTTCAATTGCTCT +
Preference number: 4 (lower is better)
Translates to: EHYIAWPPSSYFEEGFQAVASPS*SNFNCS
Trigger: AGAGCAATTGAAGTTCGAGCAGGATGGAGAAGCCAC...AGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTGGTCACAGACATGGATaGACTGACGGCTATTCCCAT +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSAGHRHG*TDGYSH
Trigger: ATGGGAATAGCCGTCAGTGCATCCATGTCTGTGACC...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTTCATTTAAAACATCCTaGCTCATCCCCACATTCGCT +
Preference number: 4 (lower is better)
Translates to: QSIPWAIQFRREINGPSGSFKTS*LIPTFA
Trigger: AGCGAATGTGGGGATGAGGCAGGATGTTTTAAATGA...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGTCATTTAAAACATCCTaGCTCATCCCCACATTCGCT +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVSFKTS*LIPTFA
Trigger: AGCGAATGTGGGGATGAGGCAGGATGTTTTAAATGA...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGTCAGGGCAAAATCTATaGAGTGTCTTACTAATTTCA +
Preference number: 4 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKSGQNL*SVLLIS
Trigger: TGAAATTAGTAAGACACTGCATAGATTTTGCCCTGA...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGAACTGGTGCCGAACCTaGTTCTCCAAGAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFENWCRT*FSKKCM
Trigger: CATGCACTTCTTGGAGAACCAGGTTCGGCACCAGTT...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGCAGGCAGTGAAACGTTaGCCAAGCAGCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQQAVKR*PSSSSS
Trigger: ACTGCTGCTGCTGCTTGGCCAACGTTTCACTGCCTG...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAGAGTTTTGTCTTGACTaGCAGACACCTCCAACAAAG +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKEFCLD*QTPPTK
Trigger: CTTTGTTGGAGGTGTCTGCCAGTCAAGACAAAACTC...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGGAGGACCAGCAGCTCTaGGAGAAAGTGGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQEDQQL*EKVADS
Trigger: GGAATCTGCCACTTTCTCCCAGAGCTGCTGGTCCTC...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACGCCACAGGGGACAGGTaGTTGTCTTATTCTCAAATA +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHATGDR*LSYSQI
Trigger: TATTTGAGAATAAGACAACCACCTGTCCCCTGTGGC...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTATTGGGGAGCAGAATCTaGCATAGAGCAAGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLLGSRI*HRARLR
Trigger: TCGAAGCCTTGCTCTATGCCAGATTCTGCTCCCCAA...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAACCAGGCATAGGGAATaGTTCGTGTTTAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKTRHRE*FVFKGQ
Trigger: TTGGCCTTTAAACACGAACCATTCCCTATGCCTGGT...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTAACACTGACACTGGAATaGTCTCTACCAGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLTLTLE*SLPGIG
Trigger: CCCTATGCCTGGTAGAGACCATTCCAGTGTCAGTGT...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCACAAATGTTCACATGTaGCATCTGGAAGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTTNVHM*HLEACA
Trigger: TGCACATGCTTCCAGATGCCACATGTGAACATTTGT...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGATCTCAATCCATTCCCTaGGCTATACAGTTTCGAAGG +
Preference number: 4 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRSQSIP*AIQFRR
Trigger: CCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGA...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AACCTCTTTCATTCTGACCATAAGATAAGCTCATATTTGGTGTCAGAAACATCCGAGAGGGGATGGGACTaGGGTCAGCAGGATTCTCAC +
Preference number: 4 (lower is better)
Translates to: NLFHSDHKISSYLVSETSERGWD*GQQDSH
Trigger: GTGAGAATCCTGCTGACCCCAGTCCCATCCCCTCTC...GGATGTTTCTGACACCAAATATGAGCTTATCTTATGGTCAGAATGAAAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAAGGTTTCCAGGCTGTCACTCATCCAGGTTaGCTGCTCAAACACCAAGAA +
Preference number: 4 (lower is better)
Translates to: EHYIAWPPSSYFEEGFQAVTHPG*LLKHQE
Trigger: TTCTTGGTGTTTGAGCAGCCAACCTGGATGAGTGAC...AGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 72 bp TTCCCTAGTAGAGAACTGGTAGCAAAGGATCCTAGGTaGTGCCTGTTAATCTGTCATGTTGGGGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: FPSRELVAKDPR*CLLICHVGEQN
Trigger: ATTCTGCTCCCCAACATGACAGATTAACAGGCACAACCTAGGATCCTTTGCTACCAGTTCTCTACTAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACGTCAGAGTTTTGTCTTaGCTGGCAGACACCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNVRVLS*LADTSN
Trigger: GTTGGAGGTGTCTGCCAGTCAAGACAAAACTCTGAC...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGACCACACAGACTTTCTaGACAGTCCATCCCAATGTT +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKTTQTF*TVHPNV
Trigger: AACATTGGGATGGACTGTTCAGAAAGTCTGTGTGGT...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGACAAGAAAAGGGATTTaGTCCCAAGACTATAGACTC +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVTRKGI*SQDYRL
Trigger: GAGTCTATAGTCTTGGGATCAAATCCCTTTTCTTGT...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCCTCCAAGAGCATTATTaGACCCTTAAGAGACTAAAC +
Preference number: 4 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTLQEHY*TLKRLN
Trigger: GTTTAGTCTCTTAAGGGTTCAATAATGCTCTTGGAG...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCACCAGTAAATCTGTGTTaGCCCAGAGGTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPPVNLC*PRGAAA
Trigger: AGCAGCAGCACCTCTGGGTCAACACAGATTTACTGG...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTAGAGAAGTGTGTTTGTaGGGGGTCCAAAATGATAAA +
Preference number: 4 (lower is better)
Translates to: QSIPWAIQFRREINGPSGREVCL*GVQNDK
Trigger: TTTATCATTTTGGACCCCTCACAAACACACTTCTCT...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CATATAGAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAAGAATCTTATCTTaGGATGAGATGTGTGAACCA +
Preference number: 4 (lower is better)
Translates to: HIEGSEQKCLKQLLPADSLRILS*DEMCEP
Trigger: TGGTTCACACATCTCATCTCAAGATAAGATTCTTAG...GGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTCTATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTACACATTACTGAAATaGCAGCAACCCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: ASQSIPWAIQFRREINGPYTLLK*QQPTLQ
Trigger: CTGCAATGTGGGTTGCTGTCATTTCAGTAATGTGTA...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAAAACATACACATTACTaGAATGACAGCAACCCACAT +
Preference number: 4 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEEKHTHY*NDSNPH
Trigger: ATGTGGGTTGCTGTCATTTCAGTAATGTGTATGTTT...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGGGACACGTGGAGATGTaGGACAGAAAGCTACCGAGA +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQGHVEM*DRKLPR
Trigger: TCTCGGTAGCTTTCTGTCTCACATCTCCACGTGTCC...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGAGGCAGTATCATCTGCTaGGCCTACAGAATTGAAAAT +
Preference number: 4 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRGSIIC*AYRIEN
Trigger: ATTTTCAATTCTGTAGGCTCAGCAGATGATACTGCC...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGGGCAGTATCATCTGCTaGGCCTACAGAATTGAAAAT +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKGSIIC*AYRIEN
Trigger: ATTTTCAATTCTGTAGGCTCAGCAGATGATACTGCC...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CCTCTTGAACAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCTTACAAAAGCTTCCCTaGAGGCCTCAGTTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: PLEQAFVIFCMDTNEPQTLQKLP*RPQFKD
Trigger: ATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAA...GGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTGTTCAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCCCACCATTCTTCACTTaGCAGTCTTTGTGGACACGT +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLPPFFT*QSLWTR
Trigger: ACGTGTCCACAAAGACTGTCAAGTGAAGAATGGTGG...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGTACCATGTTTCCGGATaGCCTGTCACTGAAGTGCGA +
Preference number: 4 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLYHVSG*PVTEVR
Trigger: TCGCACTTCAGTGACAGGGCATCCGGAAACATGGTA...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS-3UTR GCA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGAGAGGAACATTACATTaGATGGCCACCATCAAGTTA +
Preference number: 4 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVRGTLH*MATIKL
Trigger: TAACTTGATGGTGGCCATGCAATGTAATGTTCCTCT...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCGTGGCTTCTCCATCCTaGTCGAACTTCAATTGCTCT +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSVASPS*SNFNCS
Trigger: AGAGCAATTGAAGTTCGAGCAGGATGGAGAAGCCAC...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCGACAGCAACCCACATTaGAGAGGAGAAAAGTCTATT +
Preference number: 4 (lower is better)
Translates to: ASQSIPWAIQFRREINGPDSNPH*RGEKSI
Trigger: AATAGACTTTTCTCCTCTGCAATGTGGGTTGCTGTC...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTAAGGATCCTAGGTTGTaGCTGTTAATCTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: QSIPWAIQFRREINGPSGKDPRL*LLICHV
Trigger: AACATGACAGATTAACAGGCACAACCTAGGATCCTT...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGATGGCTCCTAGCTTCTaGTGCCACTGTGGAATTCCC +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQMAPSF*CHCGIP
Trigger: GGGAATTCCACAGTGGCAGCAGAAGCTAGGAGCCAT...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCCTAAGGCAAGTCCACTaGCAAGCTGAGCATTATCCT +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSLRQVH*QAEHYP
Trigger: AGGATAATGCTCAGCTTGGCAGTGGACTTGCCTTAG...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACATGAGAGTAATGTCCTaGCATCTCCAACTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNMRVMS*HLQLVP
Trigger: CGGCACCAGTTGGAGATGCCAGGACATTACTCTCAT...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAAGGTTTCCAGGCTGAGTTTTGTCTTGACTaGCAGACACCTCCAACAAAG +
Preference number: 4 (lower is better)
Translates to: EHYIAWPPSSYFEEGFQAEFCLD*QTPPTK
Trigger: CTTTGTTGGAGGTGTCTGCCAGTCAAGACAAAACTC...AGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TTACCACCACTGGAAACAGAGAGAGAGCACGGCATACCTGGGCACACCAGTATTAATCTGTTATGTCCCTaGATCCAATTATTTAGCCTA +
Preference number: 4 (lower is better)
Translates to: LPPLETEREHGIPGHTSINLLCP*IQLFSL
Trigger: TAGGCTAAATAATTGGATCCAGGGACATAACAGATT...AATACTGGTGTGCCCAGGTATGCCGTGCTCTCTCTCTGTTTCCAGTGGTGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CATATAGAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCAAAATTCTCAACTATaGCCAAAAAGGCCTAAACTC +
Preference number: 4 (lower is better)
Translates to: HIEGSEQKCLKQLLPADSQNSQL*PKRPKL
Trigger: GAGTTTAGGCCTTTTTGGCCATAGTTGAGAATTTTG...GGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTCTATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCAAGGAGGGTGGACACGTaGAGATGTGAGACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPRRVDT*RCETES
Trigger: GCTTTCTGTCTCACATCTCCACGTGTCCACCCTCCT...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTATTTCAAACTCCTTGTaGAGAGTCCTAAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSAISNSL*RVLSQG
Trigger: CCCCTGGCTTAGGACTCTCCACAAGGAGTTTGAAAT...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCAGGAGGGCTGGCCATTTaGCAGAATCCAAGCCTACTA +
Preference number: 4 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPGGLAI*QNPSLL
Trigger: TAGTAGGCTTGGATTCTGCCAAATGGCCAGCCCTCC...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCCGACTGTTCACTTTGTaGATCATCTCTGGCTCATTT +
Preference number: 4 (lower is better)
Translates to: ASQSIPWAIQFRREINGPRLFTL*IISGSF
Trigger: AAATGAGCCAGAGATGATCCACAAAGTGAACAGTCG...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCGTCACTCATCCAGGTTaGCTGCTCAAACACCAAGAA +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLVTHPG*LLKHQE
Trigger: TTCTTGGTGTTTGAGCAGCCAACCTGGATGAGTGAC...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTAGAGCACGGCATACCTaGGCACACCAGTATTCAGGG +
Preference number: 4 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPRARHT*AHQYSG
Trigger: CCCTGAATACTGGTGTGCCCAGGTATGCCGTGCTCT...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 72 bp GGAAAATTAATTTGCTTGCAAGCTCCAAGGCCAGCATaGGCCCTTAGCAATTCACCAATTCATCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GKLICLQAPRPA*ALSNSPIHPKK
Trigger: CTTCTTGGGATGAATTGGTGAATTGCTAAGGGCCAATGCTGGCCTTGGAGCTTGCAAGCAAATTAATTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 72 bp CATCCAACTCAAAGACCTCTGTGTCGACTGTTCACTTaGTGGATCATCTCTGGCTCATTTAAAACATCCTGC +
Preference number: 4 (lower is better)
Translates to: HPTQRPLCRLFT*WIISGSFKTSC
Trigger: GCAGGATGTTTTAAATGAGCCAGAGATGATCCACAAAGTGAACAGTCGACACAGAGGTCTTTGAGTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
3UTR CAA 72 bp GCTGCTCAAACACCAAGAATCTCCACCATTCTTCACTaGACAGTCTTTGTGGACACGTTAGACCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: AAQTPRISTILH*TVFVDTLDPNF
Trigger: AAAGTTTGGGTCTAACGTGTCCACAAAGACTGTCAAGTGAAGAATGGTGGAGATTCTTGGTGTTTGAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGTCAAGGTCAATATCTTaGGGTAAGCACCATTCTACC +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKSRSIS*GKHHST
Trigger: GGTAGAATGGTGCTTACCTCAAGATATTGACCTTGA...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAACCTCCAACAAAGTCTaGAATATCCGGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQTSNKV*NIRLFC
Trigger: ACAAAACAACCGGATATTTCAGACTTTGTTGGAGGT...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCGACACAAAACCAAGGTaGTCTCACCTTATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLDTKPR*SHLISR
Trigger: CCTAGAGATAAGGTGAGATCACCTTGGTTTTGTGTC...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCACCATCAAGTTACTTTaGGGAAGGTTTCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLTIKLL*GRFPGF
Trigger: GAAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGT...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCACCATCAAGTTACTTTaGGGAAGGTTTCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSTIKLL*GRFPGF
Trigger: GAAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGT...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCAAGAACTTTATAAACTaGGACATGCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSKNFIN*DMQPAG
Trigger: CCCAGCTGGCTGCATGTCTCAGTTTATAAAGTTCTT...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAATTCGTGTCCAGATaGAGAGACTTAGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEEFVSR*RDLEWL
Trigger: AAGCCACTCTAAGTCTCTTCATCTGGACACGAATTC...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGAGAGAAGTGTGTTTGTaGGGGGTCCAAAATGATAAA +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKREVCL*GVQNDK
Trigger: TTTATCATTTTGGACCCCTCACAAACACACTTCTCT...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCAGTGGCAAAGGTAACTaGAGAGATAAAGCACACGCT +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLSGKGN*RDKAHA
Trigger: AGCGTGTGCTTTATCTCTTCAGTTACCTTTGCCACT...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCCTATTGATACATCAATaGTTTCAGCTTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSLLIHQ*FQLPSP
Trigger: GGGGGAGGGAAGCTGAAATCATTGATGTATCAATAG...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCCTTTTCTCGGAGGGTTaGTGTCCTAAAACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSLFSEG*CPKTES
Trigger: GCTTTCAGTTTTAGGACATCAACCCTCCGAGAAAAG...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGATATCTTCTCTGTGGTaGAGGCCACATAGGACACCT +
Preference number: 4 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLISSLW*RPHRTP
Trigger: AGGTGTCCTATGTGGCCTGCACCACAGAGAAGATAT...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGAGGAACATTACATTaGATGGCCACCATCAAGTTA +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHRGTLH*MATIKL
Trigger: TAACTTGATGGTGGCCATGCAATGTAATGTTCCTCT...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGGGTCACAGACATGGATaGACTGACGGCTATTCCCAT +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQGHRHG*TDGYSH
Trigger: ATGGGAATAGCCGTCAGTGCATCCATGTCTGTGACC...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCAAGGATCCTAGGTTGTaGCTGTTAATCTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: ASQSIPWAIQFRREINGPKDPRL*LLICHV
Trigger: AACATGACAGATTAACAGGCACAACCTAGGATCCTT...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTTTATATCAACCTCTCTaGACACAACTTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: QSIPWAIQFRREINGPSGLYQPL*TQLGSD
Trigger: ATCTGAACCAAGTTGTGTGCAGAGAGGTTGATATAA...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGTCAGATTGGATTTTATaGGACCCACTGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFESDWIL*DPLAID
Trigger: GTCTATGGCCAGTGGGTCCCATAAAATCCAATCTGA...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCTCAGATTGGATTTTATaGGACCCACTGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSSDWIL*DPLAID
Trigger: GTCTATGGCCAGTGGGTCCCATAAAATCCAATCTGA...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGAACTGGTGCCGAACCTaGTTCTCCAAGAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQNWCRT*FSKKCM
Trigger: CATGCACTTCTTGGAGAACCAGGTTCGGCACCAGTT...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTAGAGTTTTGTCTTGACTaGCAGACACCTCCAACAAAG +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLEFCLD*QTPPTK
Trigger: CTTTGTTGGAGGTGTCTGCCAGTCAAGACAAAACTC...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCGCCACAGGGGACAGGTaGTTGTCTTATTCTCAAATA +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSATGDR*LSYSQI
Trigger: TATTTGAGAATAAGACAACCACCTGTCCCCTGTGGC...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTGACCTATACAGGGTCTaGAGAAAGCATCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSADLYRV*RKHLNP
Trigger: TGGATTGAGATGCTTTCTCCAGACCCTGTATAGGTC...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGACCTATACAGGGTCTaGAGAAAGCATCTCAATCCA +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEDLYRV*RKHLNP
Trigger: TGGATTGAGATGCTTTCTCCAGACCCTGTATAGGTC...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTGGAGGGCTGGCCATTTaGCAGAATCCAAGCCTACTA +
Preference number: 4 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFGGLAI*QNPSLL
Trigger: TAGTAGGCTTGGATTCTGCCAAATGGCCAGCCCTCC...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTGGTAGCAAAGGATCCTAGGTTGTGCCTGTTAATCTGTCATGTTGGGGAGCAGTCTCTGCACACAACTTaGTTCAGATATATACAGATA +
Preference number: 4 (lower is better)
Translates to: LVAKDPRLCLLICHVGEQSLHTT*FRYIQI
Trigger: TATCTGTATATATCTGAACCAAGTTGTGTGCAGAGA...CTGCTCCCCAACATGACAGATTAACAGGCACAACCTAGGATCCTTTGCTACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCTCAAGGTCAATATCTTaGGGTAAGCACCATTCTACC +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLSRSIS*GKHHST
Trigger: GGTAGAATGGTGCTTACCTCAAGATATTGACCTTGA...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp GAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAAGGTTTCCAGGCTACCTCCAACAAAGTCTaGAATATCCGGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: EHYIAWPPSSYFEEGFQATSNKV*NIRLFC
Trigger: ACAAAACAACCGGATATTTCAGACTTTGTTGGAGGT...AGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGAAACATACACATTACTaGAATGACAGCAACCCACAT +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKKHTHY*NDSNPH
Trigger: ATGTGGGTTGCTGTCATTTCAGTAATGTGTATGTTT...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTAAGGAGAATAAAAGGTaGGGCTTCAACCTCGAAACA +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSAKENKR*GFNLET
Trigger: TGTTTCGAGGTTGAAGCCTCACCTTTTATTCTCCTT...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCAAGGAGAATAAAAGGTaGGGCTTCAACCTCGAAACA +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLKENKR*GFNLET
Trigger: TGTTTCGAGGTTGAAGCCTCACCTTTTATTCTCCTT...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTCATCCCCACATTCGCTaGCTGGCCTTAGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFHPHIR*LALESK
Trigger: TTTGCTTTCTAAGGCCAGTCAGCGAATGTGGGGATG...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AACCTCTTTCATTCTGACCATAAGATAAGCTCATATTTGGTGTCAGAAACATCCGACAAACACGTAAGCTaGCCTCCTGCAAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: NLFHSDHKISSYLVSETSDKHVS*PPAKAN
Trigger: GTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTC...GGATGTTTCTGACACCAAATATGAGCTTATCTTATGGTCAGAATGAAAGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCGACAGCAACCCACATTaGAGAGGAGAAAAGTCTATT +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSDSNPH*RGEKSI
Trigger: AATAGACTTTTCTCCTCTGCAATGTGGGTTGCTGTC...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCGCATGTGCACCTGTGTaGTATCTTAACTTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLACAPV*YLNFLV
Trigger: GACAAGAAAGTTAAGATAGCACACAGGTGCACATGC...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCGCATGTGCACCTGTGTaGTATCTTAACTTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSACAPV*YLNFLV
Trigger: GACAAGAAAGTTAAGATAGCACACAGGTGCACATGC...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGTTGAAGGGCTTTCAGTaGATCAAGACTGAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFELKGFQ*IKTESK
Trigger: TTTGCTCTCAGTCTTGATGCACTGAAAGCCCTTCAA...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACTTATATCAACCTCTCTaGACACAACTTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHLYQPL*TQLGSD
Trigger: ATCTGAACCAAGTTGTGTGCAGAGAGGTTGATATAA...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACTCAGATTGGATTTTATaGGACCCACTGGCCATAGAC +
Preference number: 4 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNSDWIL*DPLAID
Trigger: GTCTATGGCCAGTGGGTCCCATAAAATCCAATCTGA...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AACCTCTTTCATTCTGACCATAAGATAAGCTCATATTTGGTGTCAGAAACATCCACATGTATCGGTGGATaGAAGGCAGCCAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: NLFHSDHKISSYLVSETSTCIGG*KAASRQ
Trigger: CTGTCTACTGGCTGCCTTCCATCCACCGATACATGT...GGATGTTTCTGACACCAAATATGAGCTTATCTTATGGTCAGAATGAAAGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTATCCAATATCCTAACATaGCAGGACACAAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLSNILT*QDTKPR
Trigger: CCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGA...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAGAACATTACATTGCATaGCCACCATCAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKEHYIA*PPSSYF
Trigger: AAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCGACCCACAGGAACTaGCTTTCTAACTGGTTGACA +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQSTHRN*LSNWLT
Trigger: TGTCAACCAGTTAGAAAGCCAGTTCCTGTGGGTCGA...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCATCCGTTAATCTGTCATGTTaGGGAGCAGAATCTGGCATA +
Preference number: 4 (lower is better)
Translates to: FSNTSRDKDHTDFLNSPSVNLSC*GAESGI
Trigger: TATGCCAGATTCTGCTCCCCAACATGACAGATTAAC...GGATGGACTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAAAAATATTTCAAGACTaGCAGAAAAGCAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: QLWEKVADSNILTWQDTKKIFQD*QKSRST
Trigger: TGTGGACCTGCTTTTCTGCCAGTCTTGAAATATTTT...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGGTTCATTTCACAGTGTaGCATGAGATCAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLVHFTV*HEIRLT
Trigger: TGTCAGCCTGATCTCATGCCACACTGTGAAATGAAC...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCGAAGGGAAATAAATaGTCCCTCGGGTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQSKGNK*SLGFLP
Trigger: AGGCAGAAACCCGAGGGACCATTTATTTCCCTTCGA...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTAACCTCCAACAAAGTCTaGAATATCCGGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLTSNKV*NIRLFC
Trigger: ACAAAACAACCGGATATTTCAGACTTTGTTGGAGGT...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCAGACACAAAACCAAGGTaGTCTCACCTTATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPDTKPR*SHLISR
Trigger: CCTAGAGATAAGGTGAGATCACCTTGGTTTTGTGTC...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGACCACACAGACTTTCTaGACAGTCCATCCCAATGTT +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQTTQTF*TVHPNV
Trigger: AACATTGGGATGGACTGTTCAGAAAGTCTGTGTGGT...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR TCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACTCAGTGCATCAAGACTaGGAGCAAATTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNSVHQD*EQIHPH
Trigger: ATGAGGATGAATTTGCTCTCAGTCTTGATGCACTGA...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTAGAGGAACATTACATTaGATGGCCACCATCAAGTTA +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSARGTLH*MATIKL
Trigger: TAACTTGATGGTGGCCATGCAATGTAATGTTCCTCT...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGGCCACAGGGGACAGGTaGTTGTCTTATTCTCAAATA +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQATGDR*LSYSQI
Trigger: TATTTGAGAATAAGACAACCACCTGTCCCCTGTGGC...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAATCCTTGCTAGATTTTaGAATCCAGTAAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQILARF*NPVNLC
Trigger: ACACAGATTTACTGGATTCCAAAATCTAGCAAGGAT...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGATCCTTGCTAGATTTTaGAATCCAGTAAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGILARF*NPVNLC
Trigger: ACACAGATTTACTGGATTCCAAAATCTAGCAAGGAT...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGAAAATATTTCAAGACTaGCAGAAAAGCAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKKIFQD*QKSRST
Trigger: TGTGGACCTGCTTTTCTGCCAGTCTTGAAATATTTT...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGCAATCATTTCCAAACTaGCACATAGTTCATTTCACA +
Preference number: 4 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKQSFPN*HIVHFT
Trigger: TGTGAAATGAACTATGTGCCAGTTTGGAAATGATTG...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTATTGTCATATTTTGCATaGATACCAACGAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLLSYFA*IPTSPK
Trigger: TTTGGGGCTCGTTGGTATCCATGCAAAATATGACAA...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTTTGTCATATTTTGCATaGATACCAACGAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSALSYFA*IPTSPK
Trigger: TTTGGGGCTCGTTGGTATCCATGCAAAATATGACAA...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp AACCTCTTTCATTCTGACCATAAGATAAGCTCATATTTGGTGTCAGAAACATCCATTTCAAACTCCTTGTaGAGAGTCCTAAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NLFHSDHKISSYLVSETSISNSL*RVLSQG
Trigger: CCCCTGGCTTAGGACTCTCCACAAGGAGTTTGAAAT...GGATGTTTCTGACACCAAATATGAGCTTATCTTATGGTCAGAATGAAAGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGATCTAAACACATAATTTaGGCCATACTTTTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRSKHII*AILLVW
Trigger: CCAGACTAAAAGTATGGCCCAAATTATGTGTTTAGA...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACCGACTGTTCACTTTGTaGATCATCTCTGGCTCATTT +
Preference number: 4 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNRLFTL*IISGSF
Trigger: AAATGAGCCAGAGATGATCCACAAAGTGAACAGTCG...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTGAATTCGTGTCCAGATaGAGAGACTTAGAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPEFVSR*RDLEWL
Trigger: AAGCCACTCTAAGTCTCTTCATCTGGACACGAATTC...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTGCAATCATAATTTACTaGGGACTGTACAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPAIIIY*GLYRSQ
Trigger: CTGGGACCTGTACAGTCCTCAGTAAATTATGATTGC...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp AACCTCTTTCATTCTGACCATAAGATAAGCTCATATTTGGTGTCAGAAACATCCGCCTTTGTCATATTTTaGATGGATACCAACGAGCCC +
Preference number: 4 (lower is better)
Translates to: NLFHSDHKISSYLVSETSAFVIF*MDTNEP
Trigger: GGGCTCGTTGGTATCCATGCAAAATATGACAAAGGC...GGATGTTTCTGACACCAAATATGAGCTTATCTTATGGTCAGAATGAAAGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR GCA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACAAAGGAAATTCATTTTaGTTTCCTCTGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNKGNSF*FPLLCP
Trigger: GGGACAGAGCAGAGGAAAGCAAAATGAATTTCCTTT...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGTCCAATATCCTAACATaGCAGGACACAAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQSNILT*QDTKPR
Trigger: CCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGA...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTGCCACAGGGGACAGGTaGTTGTCTTATTCTCAAATA +
Preference number: 4 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFATGDR*LSYSQI
Trigger: TATTTGAGAATAAGACAACCACCTGTCCCCTGTGGC...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTGAACATTACATTGCATaGCCACCATCAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSAEHYIA*PPSSYF
Trigger: AAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGCAAAATTCTCAACTATaGCCAAAAAGGCCTAAACTC +
Preference number: 4 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEQNSQL*PKRPKL
Trigger: GAGTTTAGGCCTTTTTGGCCATAGTTGAGAATTTTG...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTGTTCATTTCACAGTGTaGCATGAGATCAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPVHFTV*HEIRLT
Trigger: TGTCAGCCTGATCTCATGCCACACTGTGAAATGAAC...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTACCAGGCATAGGGAATaGTTCGTGTTTAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFTRHRE*FVFKGQ
Trigger: TTGGCCTTTAAACACGAACCATTCCCTATGCCTGGT...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGACAAGAAAAGGGATTTaGTCCCAAGACTATAGACTC +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQTRKGI*SQDYRL
Trigger: GAGTCTATAGTCTTGGGATCAAATCCCTTTTCTTGT...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR GCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTTTGAAGGGCTTTCAGTaGATCAAGACTGAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFLKGFQ*IKTESK
Trigger: TTTGCTCTCAGTCTTGATGCACTGAAAGCCCTTCAA...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTAATCTGTTATGTCCCTaGATCCAATTATTTAGCCTA +
Preference number: 4 (lower is better)
Translates to: DQFIGISLKGRSSALGSANLLCP*IQLFSL
Trigger: TAGGCTAAATAATTGGATCCAGGGACATAACAGATT...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCTCTCTGCACACAACTTaGTTCAGATATATACAGATA +
Preference number: 4 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLSLHTT*FRYIQI
Trigger: TATCTGTATATATCTGAACCAAGTTGTGTGCAGAGA...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp AACCTCTTTCATTCTGACCATAAGATAAGCTCATATTTGGTGTCAGAAACATCCCTCCAAGAGCATTATTaGACCCTTAAGAGACTAAAC +
Preference number: 4 (lower is better)
Translates to: NLFHSDHKISSYLVSETSLQEHY*TLKRLN
Trigger: GTTTAGTCTCTTAAGGGTTCAATAATGCTCTTGGAG...GGATGTTTCTGACACCAAATATGAGCTTATCTTATGGTCAGAATGAAAGAGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGCTAAGAATCTTATCTTaGGATGAGATGTGTGAACCA +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQLRILS*DEMCEP
Trigger: TGGTTCACACATCTCATCTCAAGATAAGATTCTTAG...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCAAGATGCTATAATGGATaGTGGATATGGAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPRCYNG*WIWKAK
Trigger: TTTTGCCTTCCATATCCATCATCCATTATAGCATCT...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR TCA 90 bp TTCAAGAAACATTTACTTTTAGCTTCAGGATTAACCCCAGCTTTCTTTAGGCCTTTACAAAAGCTTCCCTaGAGGCCTCAGTTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: FKKHLLLASGLTPAFFRPLQKLP*RPQFKD
Trigger: ATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAA...AGGCCTAAAGAAAGCTGGGGTTAATCCTGAAGCTAAAAGTAAATGTTTCTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CCA 90 bp TGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACAGACTTTCTGAACAGGAACATTACATTGCATaGCCACCATCAAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: CLILKYIKGQRPHRLSEQEHYIA*PPSSYF
Trigger: AAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC...CTGTTCAGAAAGTCTGTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
3UTR CAA 72 bp AGGAACATTACATTGCATGGCCACCATCAAGTTACTTaGAGGAAGGTTTCCAGGCTTCATTCTATAATTTTA +
Preference number: 4 (lower is better)
Translates to: RNITLHGHHQVT*RKVSRLHSIIL
Trigger: TAAAATTATAGAATGAAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CCA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTTCTAAACACATAATTTaGGCCATACTTTTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFSKHII*AILLVW
Trigger: CCAGACTAAAAGTATGGCCCAAATTATGTGTTTAGA...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTAGGAGGGCTGGCCATTaGGCAGAATCCAAGCCTACT +
Preference number: 5 (lower is better)
Translates to: GPWGELRAADIPREVAPSRRAGH*AESKPT
Trigger: AGTAGGCTTGGATTCTGCCAAATGGCCAGCCCTCCT...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCAGGAGGGCTGGCCATTaGGCAGAATCCAAGCCTACT +
Preference number: 5 (lower is better)
Translates to: GPGVNSGLLTSHVKWLPVRRAGH*AESKPT
Trigger: AGTAGGCTTGGATTCTGCCAAATGGCCAGCCCTCCT...GACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS GCA 90 bp GCAGGTCCAGGAGAAAGCTCCGGTCTCCTTGGGGGTCTAGGCCCATaGCCCGGGCATGCTCTGCTGTCAGAGTTTTGTCTTGACTGGCAG +
Preference number: 5 (lower is better)
Translates to: AGPGESSGLLGGLGP*PGHALLSEFCLDWQ
Trigger: CTGCCAGTCAAGACAAAACTCTGACAGCAGAGCATGCCCGGGGCATGGGCCTAGACCCCCAAGGAGACCGGAGCTTTCTCCTGGACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS CCA 90 bp ACTTCATCCGCGCGCCACGTTCCAGCTCGCTCTCCACGGGCATGTTaGCAAAGCAGGCCAGGCCGAAGAAGGGCCCCTTTCGGAAATAGA +
Preference number: 5 (lower is better)
Translates to: TSSARHVPARSPRAC*QSRPGRRRAPFGNR
Trigger: TCTATTTCCGAAAGGGGCCCTTCTTCGGCCTGGCCTGCTTTGCCAACATGCCCGTGGAGAGCGAGCTGGAACGTGGCGCGCGGATGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp GGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTAGTCACTCATCCAGGTaGGCTGCTCAAACACCAAGA +
Preference number: 5 (lower is better)
Translates to: GPWGELRAADIPREVAPSSHSSR*AAQTPR
Trigger: TCTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACT...ACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS GCA 90 bp AGAAGTGCATGTAGCGGTAAAGCAGTGTGTAGGAGGGAGAGAGGATaGCCACAGACTTCATCCGCGCGCCACGTTCCAGCTCGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RSACSGKAVCRRERG*PQTSSARHVPARSP
Trigger: TGGAGAGCGAGCTGGAACGTGGCGCGCGGATGAAGTCTGTGGGCATCCTCTCTCCCTCCTACACACTGCTTTACCGCTACATGCACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS CCA 90 bp GTTTGGACTCAGGAATGGTGCCCCCGATGCCAGGCAGTGAAACGTTaGCCAAGCAGCAGCAGCAGTACACTCTATAGCACACCACGCCCA +
Preference number: 5 (lower is better)
Translates to: VWTQEWCPRCQAVKR*PSSSSSTLYSTPRP
Trigger: TGGGCGTGGTGTGCTATAGAGTGTACTGCTGCTGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp CCTCTGGGGCCCTGGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTGCAAAGGATCCTAGGTaGTGCCTGTTAATCTGTCAT +
Preference number: 5 (lower is better)
Translates to: PLGPWGELRAADIPREVAAKDPR*CLLICH
Trigger: ATGACAGATTAACAGGCACAACCTAGGATCCTTTGC...AGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCCAGGGCCCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS GCA 90 bp TGTCAGCCACGTTCACGTAGAAGAAAGGTTTGGACTCAGGAATGGTaGCCCCGATGCCAGGCAGTGAAACGTTGGCCAAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CQPRSRRRKVWTQEW*PRCQAVKRWPSSSS
Trigger: GCTGCTGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAACCTTTCTTCTACGTGAACGTGGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS CCA 90 bp TCTGTTCTCCAAAGAACTTCATCTCAGGGTACATGTATCGGTGGATaGAAGGCAGCCAGTAGACAGGGGGCAGGCTGCTGCCTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: SVLQRTSSQGTCIGG*KAASRQGAGCCLCR
Trigger: CCGGCAGAGGCAGCAGCCTGCCCCCTGTCTACTGGCTGCCTTCCATCCACCGATACATGTACCCTGAGATGAAGTTCTTTGGAGAACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS CCA 90 bp CGATGTCAGCCACGTTCACGTAGAAGAAAGGTTTGGACTCAGGAATaGTGCCCCCGATGCCAGGCAGTGAAACGTTGGCCAAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RCQPRSRRRKVWTQE*CPRCQAVKRWPSSS
Trigger: GCTGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAACCTTTCTTCTACGTGAACGTGGCTGACATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS CCA 90 bp CCTCCAGGCTCTCGATGTCAGCCACGTTCACGTAGAAGAAAGGTTTaGACTCAGGAATGGTGCCCCCGATGCCAGGCAGTGAAACGTTGG +
Preference number: 5 (lower is better)
Translates to: PPGSRCQPRSRRRKV*TQEWCPRCQAVKRW
Trigger: CCAACGTTTCACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAACCTTTCTTCTACGTGAACGTGGCTGACATCGAGAGCCTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTCCACTGGCCATAGACTaGAACTCAACACCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPPLAID*NSTPSR
Trigger: CCTTGAAGGTGTTGAGTTCAAGTCTATGGCCAGTGG...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS GCA 90 bp CGTTCACGTAGAAGAAAGGTTTGGACTCAGGAATGGTGCCCCCGATaGCAGGCAGTGAAACGTTGGCCAAGCAGCAGCAGCAGTACACTC +
Preference number: 5 (lower is better)
Translates to: RSRRRKVWTQEWCPR*QAVKRWPSSSSSTL
Trigger: GAGTGTACTGCTGCTGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAACCTTTCTTCTACGTGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp CATATAGAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCTGGCTCCCAGTCCTGTaGGCTCCTCCTACGGGCAAC +
Preference number: 5 (lower is better)
Translates to: HIEGSEQKCLKQLLPADSWLPVL*APPTGN
Trigger: GTTGCCCGTAGGAGGAGCCAACAGGACTGGGAGCCA...GGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTCTATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GTTGACAAACACGTAAGCTGCCCTCCTGCAAAAGCCAACCAGAGAACAGGCAGGAGGACCCCTCAACCCTaGAGAGGCAAGAAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: VDKHVSCPPAKANQRTGRRTPQP*RGKKRG
Trigger: CCCTCTCTTCTTGCCTCTCAAGGGTTGAGGGGTCCT...CCTGCCTGTTCTCTGGTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS TCA 90 bp GAAGAAAGGTTTGGACTCAGGAATGGTGCCCCCGATGCCAGGCAGTaGAACGTTGGCCAAGCAGCAGCAGCAGTACACTCTATAGCACAC +
Preference number: 5 (lower is better)
Translates to: EERFGLRNGAPDARQ*NVGQAAAAVHSIAH
Trigger: GTGTGCTATAGAGTGTACTGCTGCTGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAACCTTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCTGGCTCCCAGTCCTGTaGGCTCCTCCTACGGGCAAC +
Preference number: 5 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTWLPVL*APPTGN
Trigger: GTTGCCCGTAGGAGGAGCCAACAGGACTGGGAGCCA...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGTGGCTCCCAGTCCTGTaGGCTCCTCCTACGGGCAAC +
Preference number: 5 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVWLPVL*APPTGN
Trigger: GTTGCCCGTAGGAGGAGCCAACAGGACTGGGAGCCA...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTCACCATCAAGTTACTTaGAGGAAGGTTTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPHHQVT*RKVSRL
Trigger: AAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTG...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp GTTGACAAACACGTAAGCTGCCCTCCTGCAAAAGCCAACCAGAGAACAGGCAGGGCTCCAAGGCCAGCATaGGCCCTTAGCAATTCACCA +
Preference number: 5 (lower is better)
Translates to: VDKHVSCPPAKANQRTGRAPRPA*ALSNSP
Trigger: TGGTGAATTGCTAAGGGCCAATGCTGGCCTTGGAGC...CCTGCCTGTTCTCTGGTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTATCTGCCTCTGCTCGTaGAGCCGGCGGTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: QSIPWAIQFRREINGPSGICLCS*SRRYFS
Trigger: GGAGAAGTACCGCCGGCTCAACGAGCAGAGGCAGAT...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGAATCTGCCTCTGCTCGTaGAGCCGGCGGTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRICLCS*SRRYFS
Trigger: GGAGAAGTACCGCCGGCTCAACGAGCAGAGGCAGAT...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAATCTGCCTCTGCTCGTaGAGCCGGCGGTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQICLCS*SRRYFS
Trigger: GGAGAAGTACCGCCGGCTCAACGAGCAGAGGCAGAT...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGTGGCTCCCAGTCCTGTaGGCTCCTCCTACGGGCAAC +
Preference number: 5 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKWLPVL*APPTGN
Trigger: GTTGCCCGTAGGAGGAGCCAACAGGACTGGGAGCCA...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACTCCCTGTCAGCACTGTaGATCTTCAGCAGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHSLSAL*IFSSGC
Trigger: GCAGCCGCTGCTGAAGATCAACAGTGCTGACAGGGA...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp CATATAGAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCTACGGGCAACAGGGGTaGTCGATAACCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: HIEGSEQKCLKQLLPADSYGQQG*SITSMT
Trigger: TGTCATGCTGGTTATCGACAACCCCTGTTGCCCGTA...GGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTCTATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp AACTCCGGGCTGCTGACATCCCACGTGAAGTGGCTCCCAGTCCTGTTGGCTCCTAAAAATAACCATTACTaGACAGAAAGGACCCCTCAA +
Preference number: 5 (lower is better)
Translates to: NSGLLTSHVKWLPVLLAPKNNHY*TERTPQ
Trigger: TTGAGGGGTCCTTTCTGTCAAGTAATGGTTATTTTT...AGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGGGGAGAAGTTCTGCATaGGGGTCAGCTGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGGRSSA*GSAEPK
Trigger: CTTGGGCTCAGCTGACCCCAATGCAGAACTTCTCCC...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp AAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGGGGAGAAGTTCTGCATaGGGGTCAGCTGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: KATGDRWLSYSQIHQGTKGRSSA*GSAEPK
Trigger: CTTGGGCTCAGCTGACCCCAATGCAGAACTTCTCCC...CTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GTCCTAAGCCAGGGGCCAACTGGACATTTTCCCAAAGGCTGGGCAGTATCATCTTTTACCTCTGCAAGGTaGACCTATACAGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: VLSQGPTGHFPKGWAVSSFTSAR*TYTGSG
Trigger: TCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAA...AGATGATACTGCCCAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTTAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp TTTACTGAGGACTGTACAGGTCCCAGGTGGGACACTGACACTGGAATGGTCTCTCCCATGCCTGGCATATaGGTCCCCATTCTAATTGTC +
Preference number: 5 (lower is better)
Translates to: FTEDCTGPRWDTDTGMVSPMPGI*VPILIV
Trigger: GACAATTAGAATGGGGACCAATATGCCAGGCATGGG...AGAGACCATTCCAGTGTCAGTGTCCCACCTGGGACCTGTACAGTCCTCAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GTCCTAAGCCAGGGGCCAACTGGACATTTTCCCAAAGGCTGGGCAGTATCATCTTCCAAGCCTACTAGCTaGGGATCTACTAGGGAGATA +
Preference number: 5 (lower is better)
Translates to: VLSQGPTGHFPKGWAVSSSKPTS*GSTREI
Trigger: TATCTCCCTAGTAGATCCCAAGCTAGTAGGCTTGGA...AGATGATACTGCCCAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTTAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GAAGGCTCAGAGCAGAAATGCCTCAAACAGCTCCTTCCGGCAGATTCCCTAATTCCACTGGCCATAGACTaGAACTCAACACCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: EGSEQKCLKQLLPADSLIPLAID*NSTPSR
Trigger: CCTTGAAGGTGTTGAGTTCAAGTCTATGGCCAGTGG...AATTAGGGAATCTGCCGGAAGGAGCTGTTTGAGGCATTTCTGCTCTGAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGATCTGCCTCTGCTCGTaGAGCCGGCGGTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEICLCS*SRRYFS
Trigger: GGAGAAGTACCGCCGGCTCAACGAGCAGAGGCAGAT...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp GTCCTAAGCCAGGGGCCAACTGGACATTTTCCCAAAGGCTGGGCAGTATCATCTAACCAGCTCAGATCCTaGCTAGATTTTGGAATCCAG +
Preference number: 5 (lower is better)
Translates to: VLSQGPTGHFPKGWAVSSNQLRS*LDFGIQ
Trigger: CTGGATTCCAAAATCTAGCAAGGATCTGAGCTGGTT...AGATGATACTGCCCAGCCTTTGGGAAAATGTCCAGTTGGCCCCTGGCTTAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAATACGGGCAACAGGGGTaGTCGATAACCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: LRPQGTGGCLILKYIKGQYGQQG*SITSMT
Trigger: TGTCATGCTGGTTATCGACAACCCCTGTTGCCCGTA...TTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp CAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGACAAAGACCACACTACGGGCAACAGGGGTaGTCGATAACCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: QGTGGCLILKYIKGQRPHYGQQG*SITSMT
Trigger: TGTCATGCTGGTTATCGACAACCCCTGTTGCCCGTA...GTGTGGTCTTTGTCCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCCAGTAAATCTGTGTaGACCCAGAGGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ASQSIPWAIQFRREINGPSSKSV*TQRCCC
Trigger: GCAGCAGCACCTCTGGGTCAACACAGATTTACTGGA...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCAGGACCCCTCAACCCTaGAGAGGCAAGAAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLRTPQP*RGKKRG
Trigger: CCCTCTCTTCTTGCCTCTCAAGGGTTGAGGGGTCCT...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp TCCTCTGCTCTGTCCCTGAAGTCACTCATCCAGGTTGGCTGCTCAAACACCAAGTTAAAAATCCATGACTaGGGAGTAAACGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: SSALSLKSLIQVGCSNTKLKIHD*GVNGAL
Trigger: AAGGGCTCCGTTTACTCCCAAGTCATGGATTTTTAA...CTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACTTCAGGGACAGAGCAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTCGGGTAGTCACTCATCCAGGTaGGCTGCTCAAACACCAAGA +
Preference number: 5 (lower is better)
Translates to: QSIPWAIQFRREINGPSGSHSSR*AAQTPR
Trigger: TCTTGGTGTTTGAGCAGCCAACCTGGATGAGTGACT...ACCCGAGGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CCTCTTGAACAGGCCTTTGTCATATTTTGCATGGATACCAACGAGCCCCAAACCTGTCAGAGTTTTGTCTaGACTGGCAGACACCTCCAA +
Preference number: 5 (lower is better)
Translates to: PLEQAFVIFCMDTNEPQTCQSFV*TGRHLQ
Trigger: TTGGAGGTGTCTGCCAGTCAAGACAAAACTCTGACA...GGTTTGGGGCTCGTTGGTATCCATGCAAAATATGACAAAGGCCTGTTCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGTGTCAGAGTTTTGTCTaGACTGGCAGACACCTCCAA +
Preference number: 5 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVCQSFV*TGRHLQ
Trigger: TTGGAGGTGTCTGCCAGTCAAGACAAAACTCTGACA...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp GAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGGAAGGTTTCCAGGCTTCCAGTAAATCTGTGTaGACCCAGAGGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: EHYIAWPPSSYFEEGFQASSKSV*TQRCCC
Trigger: GCAGCAGCACCTCTGGGTCAACACAGATTTACTGGA...AGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAAAACCAGCTCAGATCCTaGCTAGATTTTGGAATCCAG +
Preference number: 5 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEENQLRS*LDFGIQ
Trigger: CTGGATTCCAAAATCTAGCAAGGATCTGAGCTGGTT...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp AGACTTTCTGAACAGTCCATCCCAATGTTTCCAGAGCTCAGCCTACTCCTAGTGCCAGCACTTCTGAGCTaGCAGTTAAAACTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: RLSEQSIPMFPELSLLLVPALLS*QLKLQC
Trigger: ACACTGCAGTTTTAACTGCAAGCTCAGAAGTGCTGG...CACTAGGAGTAGGCTGAGCTCTGGAAACATTGGGATGGACTGTTCAGAAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GTTGACAAACACGTAAGCTGCCCTCCTGCAAAAGCCAACCAGAGAACAGGCAGGCTCTTGAACAGGCCTTaGTCATATTTTGCATGGATA +
Preference number: 5 (lower is better)
Translates to: VDKHVSCPPAKANQRTGRLLNRP*SYFAWI
Trigger: TATCCATGCAAAATATGACAAAGGCCTGTTCAAGAG...CCTGCCTGTTCTCTGGTTGGCTTTTGCAGGAGGGCAGCTTACGTGTTTGTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp TCATATTTTGCATGGATACCAACGAGCCCCAAACCTGAATTCCACTCCCACCTGACCATTTCAAACTCCTaGTGGAGAGTCCTAAGCCAG +
Preference number: 5 (lower is better)
Translates to: SYFAWIPTSPKPEFHSHLTISNS*WRVLSQ
Trigger: CTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGT...CAGGTGGGAGTGGAATTCAGGTTTGGGGCTCGTTGGTATCCATGCAAAATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CACGCTGTTCAGCCAAGCAGAGGCTCTGCACAAGATTTCTGGTCCTATGAAGAACCCATTCTAATTGTCTaGCCCATGTTAGACCTGTCA +
Preference number: 5 (lower is better)
Translates to: HAVQPSRGSAQDFWSYEEPILIV*PMLDLS
Trigger: TGACAGGTCTAACATGGGCAAGACAATTAGAATGGG...TTCTTCATAGGACCAGAAATCTTGTGCAGAGCCTCTGCTTGGCTGAACAGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCTCCAAGCCTACTAGCTaGGGATCTACTAGGGAGATA +
Preference number: 5 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTSKPTS*GSTREI
Trigger: TATCTCCCTAGTAGATCCCAAGCTAGTAGGCTTGGA...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCTGTCGACTGTTCACTTaGTGGATCATCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTCRLFT*WIISGS
Trigger: TGAGCCAGAGATGATCCACAAAGTGAACAGTCGACA...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAATGTCAGAGTTTTGTCTaGACTGGCAGACACCTCCAA +
Preference number: 5 (lower is better)
Translates to: QLWEKVADSNILTWQDTKCQSFV*TGRHLQ
Trigger: TTGGAGGTGTCTGCCAGTCAAGACAAAACTCTGACA...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGTGTCAGAGTTTTGTCTaGACTGGCAGACACCTCCAA +
Preference number: 5 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGCQSFV*TGRHLQ
Trigger: TTGGAGGTGTCTGCCAGTCAAGACAAAACTCTGACA...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp GCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAACCCACCATCAAGTTACTTaGAGGAAGGTTTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: ALGESGRFQYPNMAGHKTHHQVT*RKVSRL
Trigger: AAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTG...GGTTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGACCAGCACTTCTGAGCTaGCAGTTAAAACTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRPALLS*QLKLQC
Trigger: ACACTGCAGTTTTAACTGCAAGCTCAGAAGTGCTGG...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCACCATTTCAAACTCCTaGTGGAGAGTCCTAAGCCAG +
Preference number: 5 (lower is better)
Translates to: ASQSIPWAIQFRREINGPTISNS*WRVLSQ
Trigger: CTGGCTTAGGACTCTCCACAAGGAGTTTGAAATGGT...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGATCCACCATTCTTCACTaGACAGTCTTTGTGGACACG +
Preference number: 5 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRSTILH*TVFVDT
Trigger: CGTGTCCACAAAGACTGTCAAGTGAAGAATGGTGGA...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACTACGGGCAACAGGGGTaGTCGATAACCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNYGQQG*SITSMT
Trigger: TGTCATGCTGGTTATCGACAACCCCTGTTGCCCGTA...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTACTGCTCGAACTTCAATaGCTCTATCCTCCGGTAGTC +
Preference number: 5 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLLLELQ*LYPPVV
Trigger: GACTACCGGAGGATAGAGCAATTGAAGTTCGAGCAG...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGAGCAAAGGATCCTAGGTaGTGCCTGTTAATCTGTCAT +
Preference number: 5 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRAKDPR*CLLICH
Trigger: ATGACAGATTAACAGGCACAACCTAGGATCCTTTGC...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GAACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGTGTCGACTGTTCACTTaGTGGATCATCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: EHLRPQGTGGCLILKYIKCRLFT*WIISGS
Trigger: TGAGCCAGAGATGATCCACAAAGTGAACAGTCGACA...CTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS TCA 90 bp AATTTCCAGAGGATGAGGATCTGTTCTCCAAAGAACTTTATAAACTaGGACATGCAGCCAGCTGGGTGTGTGATCTTCATCTCAGGGTAC +
Preference number: 5 (lower is better)
Translates to: NFQRMRICSPKNFIN*DMQPAGCVIFISGY
Trigger: GTACCCTGAGATGAAGATCACACACCCAGCTGGCTGCATGTCTCAGTTTATAAAGTTCTTTGGAGAACAGATCCTCATCCTCTGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp AACCTCTTTCATTCTGACCATAAGATAAGCTCATATTTGGTGTCAGAAACATCCGCTCCAAGGCCAGCATaGGCCCTTAGCAATTCACCA +
Preference number: 5 (lower is better)
Translates to: NLFHSDHKISSYLVSETSAPRPA*ALSNSP
Trigger: TGGTGAATTGCTAAGGGCCAATGCTGGCCTTGGAGC...GGATGTTTCTGACACCAAATATGAGCTTATCTTATGGTCAGAATGAAAGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CAGCTCTGGGAGAAAGTGGCAGATTCCAATATCCTAACATGGCAGGACACAAAAAACTGGAAAATTAATTaGCTTGCAAGCTCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: QLWEKVADSNILTWQDTKNWKIN*LASSKA
Trigger: GGCCTTGGAGCTTGCAAGCAAATTAATTTTCCAGTT...TTTTGTGTCCTGCCATGTTAGGATATTGGAATCTGCCACTTTCTCCCAGAGCTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GCATCTCAATCCATTCCCTGGGCTATACAGTTTCGAAGGGAAATAAATGGTCCCTGTGTGAACCACCATTaGAATGTTATTTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: ASQSIPWAIQFRREINGPCVNHH*NVISPC
Trigger: GCAGGGAGAAATAACATTCAAATGGTGGTTCACACA...GGGACCATTTATTTCCCTTCGAAACTGTATAGCCCAGGGAATGGATTGAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGATGTGTGAACCACCATTaGAATGTTATTTCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRCVNHH*NVISPC
Trigger: GCAGGGAGAAATAACATTCAAATGGTGGTTCACACA...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGACATCTTTTACTGTGTTaGAAGGGCTTTCAGTGCATC +
Preference number: 5 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRHLLLC*KGFQCI
Trigger: GATGCACTGAAAGCCCTTCAAACACAGTAAAAGATG...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGCCCATGCCTGGCATATaGGTCCCCATTCTAATTGTC +
Preference number: 5 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLPMPGI*VPILIV
Trigger: GACAATTAGAATGGGGACCAATATGCCAGGCATGGG...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCACCACTGGCCATAGACTaGAACTCAACACCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPPLAID*NSTPSR
Trigger: CCTTGAAGGTGTTGAGTTCAAGTCTATGGCCAGTGG...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCCACCATCAAGTTACTTaGAGGAAGGTTTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLHHQVT*RKVSRL
Trigger: AAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTG...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp ACATCTAAGGCCACAGGGGACAGGTGGTTGTCTTATTCTCAAATACATCAAGGGCTCTTGAACAGGCCTTaGTCATATTTTGCATGGATA +
Preference number: 5 (lower is better)
Translates to: TSKATGDRWLSYSQIHQGLLNRP*SYFAWI
Trigger: TATCCATGCAAAATATGACAAAGGCCTGTTCAAGAG...CCCTTGATGTATTTGAGAATAAGACAACCACCTGTCCCCTGTGGCCTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGCCCATTCTAATTGTCTaGCCCATGTTAGACCTGTCA +
Preference number: 5 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEPILIV*PMLDLS
Trigger: TGACAGGTCTAACATGGGCAAGACAATTAGAATGGG...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GAATGTTATTTCTCCCTGCTGTGTACATTAGTCTGGCTGGGTGTTGGTCACAGACTCTCTGCACACAACTaGGTTCAGATATATACAGAT +
Preference number: 5 (lower is better)
Translates to: ECYFSLLCTLVWLGVGHRLSAHN*VQIYTD
Trigger: ATCTGTATATATCTGAACCAAGTTGTGTGCAGAGAG...TCTGTGACCAACACCCAGCCAGACTAATGTACACAGCAGGGAGAAATAACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp AACCTCTTTCATTCTGACCATAAGATAAGCTCATATTTGGTGTCAGAAACATCCCCACTGGCCATAGACTaGAACTCAACACCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: NLFHSDHKISSYLVSETSPLAID*NSTPSR
Trigger: CCTTGAAGGTGTTGAGTTCAAGTCTATGGCCAGTGG...GGATGTTTCTGACACCAAATATGAGCTTATCTTATGGTCAGAATGAAAGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS-3UTR CAA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGAACTGGAAAATTAATTaGCTTGCAAGCTCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFENWKIN*LASSKA
Trigger: GGCCTTGGAGCTTGCAAGCAAATTAATTTTCCAGTT...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTCTGCTCGAACTTCAATaGCTCTATCCTCCGGTAGTC +
Preference number: 5 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFLLELQ*LYPPVV
Trigger: GACTACCGGAGGATAGAGCAATTGAAGTTCGAGCAG...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GACCAATTTATTGGAATCTCTCTTAAAGGGAGAAGTTCTGCATTGGGGTCAGCTAAAAAGGAGGTCTTCTaGTGTCCTCTAGGAGAATCA +
Preference number: 5 (lower is better)
Translates to: DQFIGISLKGRSSALGSAKKEVF*CPLGES
Trigger: TGATTCTCCTAGAGGACACAAGAAGACCTCCTTTTT...AGCTGACCCCAATGCAGAACTTCTCCCTTTAAGAGAGATTCCAATAAATTGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCATTTACCTCTGCAAGGTaGACCTATACAGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPFTSAR*TYTGSG
Trigger: TCCAGACCCTGTATAGGTCAACCTTGCAGAGGTAAA...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp ATTATTTGTCACCAACAACCCAGTATCCCAAGTCAAAATTCTCAACTATGGCCACACCATCAAGTTACTTaGAGGAAGGTTTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: IICHQQPSIPSQNSQLWPHHQVT*RKVSRL
Trigger: AAGCCTGGAAACCTTCCTCAAAGTAACTTGATGGTG...TGGCCATAGTTGAGAATTTTGACTTGGGATACTGGGTTGTTGGTGACAAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp GGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGAGATTGAAAATGCCCTCTaGAACAGGCCTTTGTCATAT +
Preference number: 5 (lower is better)
Translates to: GSDKEEHYIAWPPSSYFEIENAL*NRPLSY
Trigger: ATATGACAAAGGCCTGTTCAAGAGGGCATTTTCAAT...CTCAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp TTCCAATATCCTAACATGGCAGGACACAAAACCAAGGTGATCTCACCTTATCTCATTGAAAATGCCCTCTaGAACAGGCCTTTGTCATAT +
Preference number: 5 (lower is better)
Translates to: FQYPNMAGHKTKVISPYLIENAL*NRPLSY
Trigger: ATATGACAAAGGCCTGTTCAAGAGGGCATTTTCAAT...GAGATAAGGTGAGATCACCTTGGTTTTGTGTCCTGCCATGTTAGGATATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp AAGGTTCAGACAAAGAGGAACATTACATTGCATGGCCACCATCAAGTTACTTTGCATCTTTTACTGTGTTaGAAGGGCTTTCAGTGCATC +
Preference number: 5 (lower is better)
Translates to: KVQTKRNITLHGHHQVTLHLLLC*KGFQCI
Trigger: GATGCACTGAAAGCCCTTCAAACACAGTAAAAGATG...CAAAGTAACTTGATGGTGGCCATGCAATGTAATGTTCCTCTTTGTCTGAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTTCCACCATTCTTCACTaGACAGTCTTTGTGGACACG +
Preference number: 5 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFSTILH*TVFVDT
Trigger: CGTGTCCACAAAGACTGTCAAGTGAAGAATGGTGGA...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp AAAGGAGGTCTTCTTGTGTCCTCTAGGAGAATCAGACCTTTCCTTTCACTTCTACTCTCTGCACACAACTaGGTTCAGATATATACAGAT +
Preference number: 5 (lower is better)
Translates to: KGGLLVSSRRIRPFLSLLLSAHN*VQIYTD
Trigger: ATCTGTATATATCTGAACCAAGTTGTGTGCAGAGAG...TAGAAGTGAAAGGAAAGGTCTGATTCTCCTAGAGGACACAAGAAGACCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS TCA 90 bp AAAATATCAAAATGCGCTTTCGAAGTAAGGCAAATTTCCAGAGGATaGGGATCTGTTCTCCAAAGAACTTCATCTCAGGGTACATGTATC +
Preference number: 5 (lower is better)
Translates to: KISKCAFEVRQISRG*GSVLQRTSSQGTCI
Trigger: GATACATGTACCCTGAGATGAAGTTCTTTGGAGAACAGATCCTCATCCTCTGGAAATTTGCCTTACTTCGAAAGCGCATTTTGATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS-3UTR CAA 90 bp CTTTGTGGTCCCTACTCAAGTAAACAGAGAAGACATAAAGTTGCCCTAATGAACAAAAATAACCATTACTaGACAGAAAGGACCCCTCAA +
Preference number: 5 (lower is better)
Translates to: LCGPYSSKQRRHKVALMNKNNHY*TERTPQ
Trigger: TTGAGGGGTCCTTTCTGTCAAGTAATGGTTATTTTT...GTTCATTAGGGCAACTTTATGTCTTCTCTGTTTACTTGAGTAGGGACCACAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp CTTTACAAAAGCTTCCCTGAAGGCCTCAGTTTAAAGATGAGTGATTTCATCTTTAAAAAGGAGGTCTTCTaGTGTCCTCTAGGAGAATCA +
Preference number: 5 (lower is better)
Translates to: LYKSFPEGLSLKMSDFIFKKEVF*CPLGES
Trigger: TGATTCTCCTAGAGGACACAAGAAGACCTCCTTTTT...AAAGATGAAATCACTCATCTTTAAACTGAGGCCTTCAGGGAAGCTTTTGTAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS-3UTR CAA 90 bp AACCTCTTTCATTCTGACCATAAGATAAGCTCATATTTGGTGTCAGAAACATCCTTAAAAATCCATGACTaGGGAGTAAACGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: NLFHSDHKISSYLVSETSLKIHD*GVNGAL
Trigger: AAGGGCTCCGTTTACTCCCAAGTCATGGATTTTTAA...GGATGTTTCTGACACCAAATATGAGCTTATCTTATGGTCAGAATGAAAGAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS GCA 72 bp GGTGGATGGAAGGCAGCCAGTAGACAGGGGGCAGGCTaGTGCCTCTGCCGGGACCAGCATGGAGCACCCCCT +
Preference number: 6 (lower is better)
Translates to: GGWKAASRQGAG*CLCRDQHGAPP
Trigger: AGGGGGTGCTCCATGCTGGTCCCGGCAGAGGCAGCAGCCTGCCCCCTGTCTACTGGCTGCCTTCCATCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS CCA 72 bp GGGGTGAACTCCGGGCTGCTGACATCCCACGTGAAGTaGCTCCCAGTCCTGTTGGCTCCTCCTACGGGCAAC +
Preference number: 6 (lower is better)
Translates to: GVNSGLLTSHVK*LPVLLAPPTGN
Trigger: GTTGCCCGTAGGAGGAGCCAACAGGACTGGGAGCCACTTCACGTGGGATGTCAGCAGCCCGGAGTTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS TCA 72 bp ACCATTCTACCATGTTTCCCGAGCGGGGGTCGAAGGTaGCCACGAACACGGCCACCACCTGGTCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: TILPCFPSGGRR*PRTRPPPGPPP
Trigger: TGGAGGAGGACCAGGTGGTGGCCGTGTTCGTGGTCACCTTCGACCCCCGCTCGGGAAACATGGTAGAATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS GCA 72 bp GGAGAAAGCTCCGGTCTCCTTGGGGGTCTAGGCCCATaGCCCGGGCATGCTCTGCTGTCAGAGTTTTGTCTT +
Preference number: 6 (lower is better)
Translates to: GESSGLLGGLGP*PGHALLSEFCL
Trigger: AAGACAAAACTCTGACAGCAGAGCATGCCCGGGGCATGGGCCTAGACCCCCAAGGAGACCGGAGCTTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS CAA 72 bp TCGTTGAGCCGGCGGTACTTCTCCCTGTCAGCACTGTaGATCTTCAGCAGCGGCTGCAGGTGGTCGTGGTGT +
Preference number: 6 (lower is better)
Translates to: SLSRRYFSLSAL*IFSSGCRWSWC
Trigger: ACACCACGACCACCTGCAGCCGCTGCTGAAGATCAACAGTGCTGACAGGGAGAAGTACCGCCGGCTCAACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS CAA 90 bp TGCCTCTGCTCGTTGAGCCGGCGGTACTTCTCCCTGTCAGCACTGTaGATCTTCAGCAGCGGCTGCAGGTGGTCGTGGTGTGTCTTCACA +
Preference number: 6 (lower is better)
Translates to: CLCSLSRRYFSLSAL*IFSSGCRWSWCVFT
Trigger: TGTGAAGACACACCACGACCACCTGCAGCCGCTGCTGAAGATCAACAGTGCTGACAGGGAGAAGTACCGCCGGCTCAACGAGCAGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS GCA 72 bp TGTAGCGGTAAAGCAGTGTGTAGGAGGGAGAGAGGATaGCCACAGACTTCATCCGCGCGCCACGTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: CSGKAVCRRERG*PQTSSARHVPA
Trigger: AGCTGGAACGTGGCGCGCGGATGAAGTCTGTGGGCATCCTCTCTCCCTCCTACACACTGCTTTACCGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS TCA 72 bp TTTGGACTCAGGAATGGTGCCCCCGATGCCAGGCAGTaGAACGTTGGCCAAGCAGCAGCAGCAGTACACTCT +
Preference number: 6 (lower is better)
Translates to: FGLRNGAPDARQ*NVGQAAAAVHS
Trigger: AGAGTGTACTGCTGCTGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS GCA 72 bp AGAAGAAAGGTTTGGACTCAGGAATGGTGCCCCCGATaGCAGGCAGTGAAACGTTGGCCAAGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RRKVWTQEWCPR*QAVKRWPSSSS
Trigger: GCTGCTGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAACCTTTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS CCA 72 bp CAGGAATGGTGCCCCCGATGCCAGGCAGTGAAACGTTaGCCAAGCAGCAGCAGCAGTACACTCTATAGCACA +
Preference number: 6 (lower is better)
Translates to: QEWCPRCQAVKR*PSSSSSTLYST
Trigger: TGTGCTATAGAGTGTACTGCTGCTGCTGCTTGGCCAACGTTTCACTGCCTGGCATCGGGGGCACCATTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS TCA 72 bp AGCACCATTCTACCATGTTTCCGGATGCCCTGTCACTaGAGTGCGAACACCACTGTGGGGCTGGGACTCAGA +
Preference number: 6 (lower is better)
Translates to: STILPCFRMPCH*SANTTVGLGLR
Trigger: TCTGAGTCCCAGCCCCACAGTGGTGTTCGCACTTCAGTGACAGGGCATCCGGAAACATGGTAGAATGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS GCA 72 bp CATTCTACCATGTTTCCGGATGCCCTGTCACTGAAGTaGGAACACCACTGTGGGGCTGGGACTCAGAGGAGA +
Preference number: 6 (lower is better)
Translates to: HSTMFPDALSLK*EHHCGAGTQRR
Trigger: TCTCCTCTGAGTCCCAGCCCCACAGTGGTGTTCGCACTTCAGTGACAGGGCATCCGGAAACATGGTAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1
CDS GCA 72 bp CGTTCACGTAGAAGAAAGGTTTGGACTCAGGAATGGTaGCCCCGATGCCAGGCAGTGAAACGTTGGCCAAGC +
Preference number: 6 (lower is better)
Translates to: RSRRRKVWTQEW*PRCQAVKRWPS
Trigger: GCTTGGCCAACGTTTCACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAACCTTTCTTCTACGTGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS CCA 72 bp TCTCGATGTCAGCCACGTTCACGTAGAAGAAAGGTTTaGACTCAGGAATGGTGCCCCCGATGCCAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: SRCQPRSRRRKV*TQEWCPRCQAV
Trigger: CACTGCCTGGCATCGGGGGCACCATTCCTGAGTCCAAACCTTTCTTCTACGTGAACGTGGCTGACATCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS GCA 72 bp TTCTCCCTGTCAGCACTGTTGATCTTCAGCAGCGGCTaGAGGTGGTCGTGGTGTGTCTTCACATTCTGGTTA +
Preference number: 6 (lower is better)
Translates to: FSLSALLIFSSG*RWSWCVFTFWL
Trigger: TAACCAGAATGTGAAGACACACCACGACCACCTGCAGCCGCTGCTGAAGATCAACAGTGCTGACAGGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS CCA 72 bp GTCCTCATAGAAGGCAGCCAGATGAGAGTAATGTCCTaGCATCTCCAACTGGTGCCGAACCTGGTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: VLIEGSQMRVMS*HLQLVPNLVLQ
Trigger: TTGGAGAACCAGGTTCGGCACCAGTTGGAGATGCCAGGACATTACTCTCATCTGGCTGCCTTCTATGAGGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000482493.1
ENST00000536163.6
ENST00000574704.1
ENST00000575464.5
CDS TCA 72 bp AGGATGAGGATCTGTTCTCCAAAGAACTTTATAAACTaGGACATGCAGCCAGCTGGGTGTGTGATCTTCATC +
Preference number: 6 (lower is better)
Translates to: RMRICSPKNFIN*DMQPAGCVIFI
Trigger: GATGAAGATCACACACCCAGCTGGCTGCATGTCTCAGTTTATAAAGTTCTTTGGAGAACAGATCCTCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS CCA 72 bp TCCAAAGAACTTTATAAACTGAGACATGCAGCCAGCTaGGTGTGTGATCTTCATCTCAGGGTACATGTATCG +
Preference number: 6 (lower is better)
Translates to: SKELYKLRHAAS*VCDLHLRVHVS
Trigger: CGATACATGTACCCTGAGATGAAGATCACACACCCAGCTGGCTGCATGTCTCAGTTTATAAAGTTCTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536163.6
ENST00000575464.5
CDS TCA 72 bp AAATGCGCTTTCGAAGTAAGGCAAATTTCCAGAGGATaGGGATCTGTTCTCCAAAGAACTTCATCTCAGGGT +
Preference number: 6 (lower is better)
Translates to: KCAFEVRQISRG*GSVLQRTSSQG
Trigger: ACCCTGAGATGAAGTTCTTTGGAGAACAGATCCTCATCCTCTGGAAATTTGCCTTACTTCGAAAGCGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482493.1
ENST00000574704.1