Pregenerated sensors for DENND10 (Homo sapiens)
Ensembl gene IDs: ENSG00000119979Ensembl transcript IDs: ENST00000462327.1, ENST00000472379.2, ENST00000489988.5, ENST00000493766.5, ENST00000497903.5, ENST00000648560.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCAGGAGCTCTCCACTGGTGGGGGTTGGGGGCTCTGGGATACACTaGGAGGGTCCCACTCCCGGCTCTGTACGGCCTATGGTGTGTCCG | + |
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Preference number: 1 (lower is better) Translates to: CRSSPLVGVGGSGIH*EGPTPGSVRPMVCP Trigger: CGGACACACCATAGGCCGTACAGAGCCGGGAGTGGGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCCACCAGTGGAGAGCTCCTGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR GCA 90 bp | TGCGAGGGTCCCACTCCCGGCTCTGTACGGCCTATGGTGTGTCCGTaGACAATGACGGCCTGGGCCTCCATTTGCTCCTCCGTGAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: CEGPTPGSVRPMVCP*TMTAWASICSSVKW Trigger: CCACTTCACGGAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCACGGACACACCATAGGCCGTACAGAGCCGGGAGTGGGACCCTCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR CCA 90 bp | GATCACATGATGCAGGAGCTCTCCACTGGTGGGGGTTGGGGGCTCTaGGATACACTGCGAGGGTCCCACTCCCGGCTCTGTACGGCCTAT | + |
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Preference number: 1 (lower is better) Translates to: DHMMQELSTGGGWGL*DTLRGSHSRLCTAY Trigger: ATAGGCCGTACAGAGCCGGGAGTGGGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCCACCAGTGGAGAGCTCCTGCATCATGTGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR CCA 90 bp | CACAAGCTCGATCACATGATGCAGGAGCTCTCCACTGGTGGGGGTTaGGGGCTCTGGGATACACTGCGAGGGTCCCACTCCCGGCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: HKLDHMMQELSTGGG*GLWDTLRGSHSRLC Trigger: ACAGAGCCGGGAGTGGGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCCACCAGTGGAGAGCTCCTGCATCATGTGATCGAGCTTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR CCA 90 bp | ATTTATGCACAAGCTCGATCACATGATGCAGGAGCTCTCCACTGGTaGGGGTTGGGGGCTCTGGGATACACTGCGAGGGTCCCACTCCCG | + |
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Preference number: 1 (lower is better) Translates to: IYAQARSHDAGALHW*GLGALGYTARVPLP Trigger: CGGGAGTGGGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCCACCAGTGGAGAGCTCCTGCATCATGTGATCGAGCTTGTGCATAAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR CCA 90 bp | TTTATTTATGCACAAGCTCGATCACATGATGCAGGAGCTCTCCACTaGTGGGGGTTGGGGGCTCTGGGATACACTGCGAGGGTCCCACTC | + |
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Preference number: 1 (lower is better) Translates to: FIYAQARSHDAGALH*WGLGALGYTARVPL Trigger: GAGTGGGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCCACCAGTGGAGAGCTCCTGCATCATGTGATCGAGCTTGTGCATAAATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGGTGGGGGTTGGGGGCTCTGGGATACACTGCGAGGGTCCCACTCCCGGCTTGTGTCCGTGCACAATaGCGGCCTGGGCCTCCATTT | + |
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Preference number: 2 (lower is better) Translates to: HWWGLGALGYTARVPLPACVRAQ*RPGPPF Trigger: AAATGGAGGCCCAGGCCGTCATTGTGCACGGACACA...AGCCGGGAGTGGGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCCACCAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAACGGGTTCCATCCCCTAAATACTGCACGAGGCTGCCCAAAGATCCCCGTGGGGGTTGGGGGCTCTaGGATACACTGCGAGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: NQRVPSPKYCTRLPKDPRGGWGL*DTLRGS Trigger: GGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCC...ACGGGGATCTTTGGGCAGCCTCGTGCAGTATTTAGGGGATGGAACCCGTTGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCAGAGCTAACCGAGATTCCACCACACAGGATTGTGTAGAAACTCCTGCTGCAGGAGCTCTCCACTaGTGGGGGTTGGGGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FLRANRDSTTQDCVETPAAGALH*WGLGAL Trigger: CAGAGCCCCCAACCCCCACCAGTGGAGAGCTCCTGC...AGCAGGAGTTTCTACACAATCCTGTGTGGTGGAATCTCGGTTAGCTCTGAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTGCTTTATTTATGCACAAGCTCGATCACATGATGCAGGAGCTCTCCACTTGCACAATGACGGCCTaGGCCTCCATTTGCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: TPALFMHKLDHMMQELSTCTMTA*ASICSS Trigger: GGAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCA...AGTGGAGAGCTCCTGCATCATGTGATCGAGCTTGTGCATAAATAAAGCAGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATAAATACAGTAATCCACCTGGACAACATGTCGGTATCCCATCTCCACAAACCTATGGTGTGTCCGTaGACAATGACGGCCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EINTVIHLDNMSVSHLHKPMVCP*TMTAWA Trigger: GGCCCAGGCCGTCATTGTGCACGGACACACCATAGG...TTTGTGGAGATGGGATACCGACATGTTGTCCAGGTGGATTACTGTATTTATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR GCA 72 bp | CCCACTCCCGGCTCTGTACGGCCTATGGTGTGTCCGTaGACAATGACGGCCTGGGCCTCCATTTGCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: PTPGSVRPMVCP*TMTAWASICSS Trigger: GGAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCACGGACACACCATAGGCCGTACAGAGCCGGGAGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGCTAACCGAGATTCCACCACACAGGATTGTGTAGAAACTCCTGCTTTATTTGGCCTGGGCCTCCATTaGCTCCTCCGTGAAGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: RANRDSTTQDCVETPALFGLGLH*LLREVG Trigger: GCCCACTTCACGGAGGAGCAAATGGAGGCCCAGGCC...AAATAAAGCAGGAGTTTCTACACAATCCTGTGTGGTGGAATCTCGGTTAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| 3UTR GCA 72 bp | TTCGAAGGGAACCAACGGGTTCCATCCCCTAAATACTaGACGAGGCTGCCCAAAGATCCCCGTGTGATATTT | + |
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Preference number: 3 (lower is better) Translates to: FEGNQRVPSPKY*TRLPKDPRVIF Trigger: AAATATCACACGGGGATCTTTGGGCAGCCTCGTGCAGTATTTAGGGGATGGAACCCGTTGGTTCCCTTCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR CCA 90 bp | TGGGGGCTCTGGGATACACTGCGAGGGTCCCACTCCCGGCTCTGTACGGCCTATGGAGCTCTCCACTGGTaGGGGTTGGGGGCTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: WGLWDTLRGSHSRLCTAYGALHW*GLGALG Trigger: TCCCAGAGCCCCCAACCCCCACCAGTGGAGAGCTCC...ATAGGCCGTACAGAGCCGGGAGTGGGACCCTCGCAGTGTATCCCAGAGCCCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR CCA 90 bp | CACTGGTGGGGGTTGGGGGCTCTGGGATACACTGCGAGGGTCCCACTCCCGGCTTGCACAATGACGGCCTaGGCCTCCATTTGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HWWGLGALGYTARVPLPACTMTA*ASICSS Trigger: GGAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCA...AGCCGGGAGTGGGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCCACCAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR CCA 90 bp | GGCTCTGTACGGCCTATGGTGTGTCCGTGCACAATGACGGCCTGGGCCTCCATTGCCGAGGCGGGAGGATaGTTTGGGCCTGGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GSVRPMVCPCTMTAWASIAEAGG*FGPGRW Trigger: CCACCTCCCAGGCCCAAACCATCCTCCCGCCTCGGC...AATGGAGGCCCAGGCCGTCATTGTGCACGGACACACCATAGGCCGTACAGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR TCA 90 bp | GGAGCTCTCCACTGGTGGGGGTTGGGGGCTCTGGGATACACTGCGAGGGTCCCACCATTTGCTCCTCCGTaGAGTGGGCGTCAGACGTTT | + |
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Preference number: 4 (lower is better) Translates to: GALHWWGLGALGYTARVPPFAPP*SGRQTF Trigger: AAACGTCTGACGCCCACTTCACGGAGGAGCAAATGG...TGGGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCCACCAGTGGAGAGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR CCA 90 bp | GGGTCCCACTCCCGGCTCTGTACGGCCTATGGTGTGTCCGTGCACAATGACGGCTGCTCCTCCGTGAAGTaGGCGTCAGACGTTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GSHSRLCTAYGVSVHNDGCSSVK*ASDVSH Trigger: GTGGGAAACGTCTGACGCCCACTTCACGGAGGAGCA...GCCGTCATTGTGCACGGACACACCATAGGCCGTACAGAGCCGGGAGTGGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR CCA 90 bp | ACCAACGGGTTCCATCCCCTAAATACTGCACGAGGCTGCCCAAAGATCCCCGTGGGGGGTTGGGGGCTCTaGGATACACTGCGAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TNGFHPLNTARGCPKIPVGGWGL*DTLRGS Trigger: GGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCC...CACGGGGATCTTTGGGCAGCCTCGTGCAGTATTTAGGGGATGGAACCCGTTGGT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR CCA 90 bp | ACGGCCTATGGTGTGTCCGTGCACAATGACGGCCTGGGCCTCCATTTGCTCCTCAGGATGGTTTGGGCCTaGGAGGTGGAGGCTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TAYGVSVHNDGLGLHLLLRMVWA*EVEAAE Trigger: CTCTGCAGCCTCCACCTCCCAGGCCCAAACCATCCT...GAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCACGGACACACCATAGGCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR TCA 90 bp | GGCTCTGTACGGCCTATGGTGTGTCCGTGCACAATGACGGCCTGGGCCTCCATTTGTGTCCGTGCACAATaGCGGCCTGGGCCTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: GSVRPMVCPCTMTAWASICVRAQ*RPGPPF Trigger: AAATGGAGGCCCAGGCCGTCATTGTGCACGGACACA...AATGGAGGCCCAGGCCGTCATTGTGCACGGACACACCATAGGCCGTACAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR TCA 90 bp | TGGGGGCTCTGGGATACACTGCGAGGGTCCCACTCCCGGCTCTGTACGGCCTATACAAGCTCGATCACATaGTGCAGGAGCTCTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: WGLWDTLRGSHSRLCTAYTSSIT*CRSSPL Trigger: CAGTGGAGAGCTCCTGCATCATGTGATCGAGCTTGT...ATAGGCCGTACAGAGCCGGGAGTGGGACCCTCGCAGTGTATCCCAGAGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR GCA 90 bp | GTTCCATCCCCTAAATACTGCACGAGGCTGCCCAAAGATCCCCGTGTGATATTTGCGCGCAGCTCTGGCTaGCGCCTGCAGGACCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VPSPKYCTRLPKDPRVIFARSSG*RLQDRP Trigger: AGGCCGGTCCTGCAGGCGGCAGCCAGAGCTGCGCGC...AAATATCACACGGGGATCTTTGGGCAGCCTCGTGCAGTATTTAGGGGATGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR GCA 90 bp | ACCAACGGGTTCCATCCCCTAAATACTGCACGAGGCTGCCCAAAGATCCCCGTGCCTATGGTGTGTCCGTaGACAATGACGGCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TNGFHPLNTARGCPKIPVPMVCP*TMTAWA Trigger: GGCCCAGGCCGTCATTGTGCACGGACACACCATAGG...CACGGGGATCTTTGGGCAGCCTCGTGCAGTATTTAGGGGATGGAACCCGTTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR CCA 90 bp | GTTCCATCCCCTAAATACTGCACGAGGCTGCCCAAAGATCCCCGTGTGATATTTGCAGGAGCTCTCCACTaGTGGGGGTTGGGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VPSPKYCTRLPKDPRVIFAGALH*WGLGAL Trigger: CAGAGCCCCCAACCCCCACCAGTGGAGAGCTCCTGC...AAATATCACACGGGGATCTTTGGGCAGCCTCGTGCAGTATTTAGGGGATGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR GCA 90 bp | GTTCCATCCCCTAAATACTGCACGAGGCTGCCCAAAGATCCCCGTGTGATATTTTTAATCGGGTGGTGGTaGACGCCTGAGGTCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VPSPKYCTRLPKDPRVIFLIGWW*TPEVPA Trigger: AGCTGGGACCTCAGGCGTGCACCACCACCCGATTAA...AAATATCACACGGGGATCTTTGGGCAGCCTCGTGCAGTATTTAGGGGATGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR GCA 90 bp | TGTGTAGAAACTCCTGCTTTATTTATGCACAAGCTCGATCACATGATGCAGGAGGGCTCTGGGATACACTaGGAGGGTCCCACTCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: CVETPALFMHKLDHMMQEGSGIH*EGPTPG Trigger: GCCGGGAGTGGGACCCTCGCAGTGTATCCCAGAGCC...CTCCTGCATCATGTGATCGAGCTTGTGCATAAATAAAGCAGGAGTTTCTACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR GCA 90 bp | ACTCCTGCTTTATTTATGCACAAGCTCGATCACATGATGCAGGAGCTCTCCACTCCATCCCCTAAATACTaGACGAGGCTGCCCAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: TPALFMHKLDHMMQELSTPSPKY*TRLPKD Trigger: ATCTTTGGGCAGCCTCGTGCAGTATTTAGGGGATGG...AGTGGAGAGCTCCTGCATCATGTGATCGAGCTTGTGCATAAATAAAGCAGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS-3UTR GCA 90 bp | GTTCCATCCCCTAAATACTGCACGAGGCTGCCCAAAGATCCCCGTGTGATATTTTTGTGTAGAAACTCCTaGTTTATTTATGCACAAGCT | + |
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Preference number: 4 (lower is better) Translates to: VPSPKYCTRLPKDPRVIFLCRNS*FIYAQA Trigger: AGCTTGTGCATAAATAAAGCAGGAGTTTCTACACAA...AAATATCACACGGGGATCTTTGGGCAGCCTCGTGCAGTATTTAGGGGATGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS CCA 90 bp | CCGTGCACAATGACGGCCTGGGCCTCCATTTGCTCCTCCGTGAAGTaGGCGTCAGACGTTTCCCACGGCCCCTCGGTCCTTGGTGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PCTMTAWASICSSVK*ASDVSHGPSVLGES Trigger: GCTCTCACCAAGGACCGAGGGGCCGTGGGAAACGTCTGACGCCCACTTCACGGAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000472379.2 ENST00000493766.5 ENST00000497903.5 ENST00000648560.1 |
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| CDS CCA 90 bp | CCATCCCAGTTTGGCAAGGGCAGAGCAGGTGCCCACTGGGCCACATaGACGCTGGTCAGCATGCCAGGTAGACACCAGCAAGGAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: PSQFGKGRAGAHWAT*TLVSMPGRHQQGAG Trigger: GCCAGCTCCTTGCTGGTGTCTACCTGGCATGCTGACCAGCGTCCATGTGGCCCAGTGGGCACCTGCTCTGCCCTTGCCAAACTGGGATGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS-3UTR CAA 90 bp | GGCTCTGTACGGCCTATGGTGTGTCCGTGCACAATGACGGCCTGGGCCTCCATTGGCCTGGGCCTCCATTaGCTCCTCCGTGAAGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: GSVRPMVCPCTMTAWASIGLGLH*LLREVG Trigger: GCCCACTTCACGGAGGAGCAAATGGAGGCCCAGGCC...AATGGAGGCCCAGGCCGTCATTGTGCACGGACACACCATAGGCCGTACAGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS CCA 90 bp | CCCGGCTCTGTACGGCCTATGGTGTGTCCGTGCACAATGACGGCCTaGGCCTCCATTTGCTCCTCCGTGAAGTGGGCGTCAGACGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: PGSVRPMVCPCTMTA*ASICSSVKWASDVS Trigger: GGAAACGTCTGACGCCCACTTCACGGAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCACGGACACACCATAGGCCGTACAGAGCCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000472379.2 ENST00000493766.5 ENST00000497903.5 ENST00000648560.1 |
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| CDS-3UTR CAA 90 bp | ACGGCCTATGGTGTGTCCGTGCACAATGACGGCCTGGGCCTCCATTTGCTCCTCCTCCACTGGTGGGGGTaGGGGGCTCTGGGATACACT | + |
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Preference number: 5 (lower is better) Translates to: TAYGVSVHNDGLGLHLLLLHWWG*GALGYT Trigger: AGTGTATCCCAGAGCCCCCAACCCCCACCAGTGGAG...GAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCACGGACACACCATAGGCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS TCA 90 bp | CACATAGGGAATGAGGTTCCCTCCTGCGGGCTTCTGCTGCCACTGTaGGCAGCAAGCTGTGTGTGGAAGGCACGCCTGCCTGCTCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: HIGNEVPSCGLLLPL*AASCVWKARLPAPH Trigger: GTGAGGAGCAGGCAGGCGTGCCTTCCACACACAGCTTGCTGCTCACAGTGGCAGCAGAAGCCCGCAGGAGGGAACCTCATTCCCTATGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS CCA 90 bp | ACCCATTTGCCATCCCAGTTTGGCAAGGGCAGAGCAGGTGCCCACTaGGCCACATGGACGCTGGTCAGCATGCCAGGTAGACACCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: THLPSQFGKGRAGAH*ATWTLVSMPGRHQQ Trigger: TTGCTGGTGTCTACCTGGCATGCTGACCAGCGTCCATGTGGCCCAGTGGGCACCTGCTCTGCCCTTGCCAAACTGGGATGGCAAATGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS TCA 90 bp | AGGCTGAAGAGGACCACAGCAGTGAACCTGCAGCCACATAGGGAATaGGGTTCCCTCCTGCGGGCTTCTGCTGCCACTGTGAGCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: RLKRTTAVNLQPHRE*GSLLRASAATVSSK Trigger: CTTGCTGCTCACAGTGGCAGCAGAAGCCCGCAGGAGGGAACCTCATTCCCTATGTGGCTGCAGGTTCACTGCTGTGGTCCTCTTCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS-3UTR CAA 90 bp | CACTGGTGGGGGTTGGGGGCTCTGGGATACACTGCGAGGGTCCCACTCCCGGCTTTCCACCACACAGGATaGTGTAGAAACTCCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: HWWGLGALGYTARVPLPAFHHTG*CRNSCF Trigger: AAAGCAGGAGTTTCTACACAATCCTGTGTGGTGGAA...AGCCGGGAGTGGGACCCTCGCAGTGTATCCCAGAGCCCCCAACCCCCACCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS GCA 90 bp | GGGCTGCAGGCCACCACGTGGAAAGCACAAGAAATAAAACCCATTTaGCATCCCAGTTTGGCAAGGGCAGAGCAGGTGCCCACTGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: GLQATTWKAQEIKPI*HPSLARAEQVPTGP Trigger: TGGCCCAGTGGGCACCTGCTCTGCCCTTGCCAAACTGGGATGGCAAATGGGTTTTATTTCTTGTGCTTTCCACGTGGTGGCCTGCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS-3UTR CAA 90 bp | GTTCCATCCCCTAAATACTGCACGAGGCTGCCCAAAGATCCCCGTGTGATATTTACGGCCCCTCGGTCCTaGGTGAGAGCGATCAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: VPSPKYCTRLPKDPRVIFTAPRS*VRAISP Trigger: CGGGCTGATCGCTCTCACCAAGGACCGAGGGGCCGT...AAATATCACACGGGGATCTTTGGGCAGCCTCGTGCAGTATTTAGGGGATGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS GCA 90 bp | GCTGCCACTGTGAGCAGCAAGCTGTGTGTGGAAGGCACGCCTGCCTaGTCCTCACCAGAAATGGAGGGAGGCAACTCCATGTTAAACTGT | + |
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Preference number: 5 (lower is better) Translates to: AATVSSKLCVEGTPA*SSPEMEGGNSMLNC Trigger: ACAGTTTAACATGGAGTTGCCTCCCTCCATTTCTGGTGAGGAGCAGGCAGGCGTGCCTTCCACACACAGCTTGCTGCTCACAGTGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS TCA 90 bp | CAGGCCACCAGCACTGCAGAGAAATGGCCCCTCTCATCTTTCCGCTaGCATGTCACCTCCTTAGAGATCTGGCCTACCCATCCCCCAATA | + |
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Preference number: 5 (lower is better) Translates to: QATSTAEKWPLSSFR*HVTSLEIWPTHPPI Trigger: TATTGGGGGATGGGTAGGCCAGATCTCTAAGGAGGTGACATGTCAGCGGAAAGATGAGAGGGGCCATTTCTCTGCAGTGCTGGTGGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS GCA 90 bp | GGCCCAGAAAAGCCTTCCAGACCACTTGGTAGTTACATTTCTCATTaGCAGCGGTCGGTGTCAGCACCAGCCCCTGTGTATACCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GPEKPSRPLGSYISH*QRSVSAPAPVYTCP Trigger: AGGGCAGGTATACACAGGGGCTGGTGCTGACACCGACCGCTGGCAATGAGAAATGTAACTACCAAGTGGTCTGGAAGGCTTTTCTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS GCA 90 bp | AAGCAGAGGAGGCGGCTGGCAGTAGCTCCGAGTCCTCACTTCTCTTaGACTGTGACGGGAGAAGAAATCCAGGATACTACAATGCCACGC | + |
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Preference number: 5 (lower is better) Translates to: KQRRRLAVAPSPHFS*TVTGEEIQDTTMPR Trigger: GCGTGGCATTGTAGTATCCTGGATTTCTTCTCCCGTCACAGTGCAAGAGAAGTGAGGACTCGGAGCTACTGCCAGCCGCCTCCTCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS GCA 90 bp | TTCTGCTGCCACTGTGAGCAGCAAGCTGTGTGTGGAAGGCACGCCTaGCTGCTCCTCACCAGAAATGGAGGGAGGCAACTCCATGTTAAA | + |
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Preference number: 5 (lower is better) Translates to: FCCHCEQQAVCGRHA*LLLTRNGGRQLHVK Trigger: TTTAACATGGAGTTGCCTCCCTCCATTTCTGGTGAGGAGCAGGCAGGCGTGCCTTCCACACACAGCTTGCTGCTCACAGTGGCAGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS GCA 90 bp | TGGATAAATGAAGAAGGCATCAGGTTGGGCCGAATGAGTAAAGCCTaGATATCAGAGGTGCCCCCGTACCCCCAGGTAGGACAGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: WINEEGIRLGRMSKA*ISEVPPYPQVGQVQ Trigger: CTGCACCTGTCCTACCTGGGGGTACGGGGGCACCTCTGATATGCAGGCTTTACTCATTCGGCCCAACCTGATGCCTTCTTCATTTATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS GCA 90 bp | GAGACCCCGTCGAGATTCCACCACACAGGATTGTGTAGAAACTCCTaGTTTATTTATGCACAAGCTCGATCACATGATGCAGGAGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: ETPSRFHHTGLCRNS*FIYAQARSHDAGAL Trigger: GAGAGCTCCTGCATCATGTGATCGAGCTTGTGCATAAATAAAGCAGGAGTTTCTACACAATCCTGTGTGGTGGAATCTCGACGGGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648560.1 |
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| CDS CCA 90 bp | GCTGATATTGTAAGAATATGTCTTTACTCTAATGTTGGGGGTAGGTaGGCAGTGAGGATTCCCATGGTAGGAAAGAAGCGGCCCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: ADIVRICLYSNVGGR*AVRIPMVGKKRPQS Trigger: ACTCTGGGGCCGCTTCTTTCCTACCATGGGAATCCTCACTGCCCACCTACCCCCAACATTAGAGTAAAGACATATTCTTACAATATCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS GCA 90 bp | ATGTTAAACTGTCATGAAGAAAAGAAGTCTTTGCCTATGAGTGTGTaGATGTACACACAGACCTGTGTGTGTGTGTGTGTGTGTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: MLNCHEEKKSLPMSV*MYTQTCVCVCVCVC Trigger: GCACACACACACACACACACACACACAGGTCTGTGTGTACATGCACACACTCATAGGCAAAGACTTCTTTTCTTCATGACAGTTTAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS-3UTR CAA 90 bp | AGAGCTAACCGAGATTCCACCACACAGGATTGTGTAGAAACTCCTGCTTTATTTAATGTTATTGCGCACTaGGGGAATAGAAAGAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: RANRDSTTQDCVETPALFNVIAH*GNRKSL Trigger: TAAACTCTTTCTATTCCCCAAGTGCGCAATAACATT...AAATAAAGCAGGAGTTTCTACACAATCCTGTGTGGTGGAATCTCGGTTAGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472379.2 |
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| CDS CCA 72 bp | ATGACGGCCTGGGCCTCCATTTGCTCCTCCGTGAAGTaGGCGTCAGACGTTTCCCACGGCCCCTCGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: MTAWASICSSVK*ASDVSHGPSVL Trigger: AAGGACCGAGGGGCCGTGGGAAACGTCTGACGCCCACTTCACGGAGGAGCAAATGGAGGCCCAGGCCGTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000472379.2 ENST00000493766.5 ENST00000497903.5 ENST00000648560.1 |
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| CDS CAA 90 bp | ACGGCCTATGGTGTGTCCGTGCACAATGACGGCCTGGGCCTCCATTaGCTCCTCCGTGAAGTGGGCGTCAGACGTTTCCCACGGCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: TAYGVSVHNDGLGLH*LLREVGVRRFPRPL Trigger: GAGGGGCCGTGGGAAACGTCTGACGCCCACTTCACGGAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCACGGACACACCATAGGCCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000472379.2 ENST00000493766.5 ENST00000497903.5 ENST00000648560.1 |
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| CDS CCA 72 bp | CCATCCCAGTTTGGCAAGGGCAGAGCAGGTGCCCACTaGGCCACATGGACGCTGGTCAGCATGCCAGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PSQFGKGRAGAH*ATWTLVSMPGR Trigger: TCTACCTGGCATGCTGACCAGCGTCCATGTGGCCCAGTGGGCACCTGCTCTGCCCTTGCCAAACTGGGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CCA 72 bp | GAGCAAGGAGCTGGGAACAGGCCAAATGCAAGGAGCTaGGCGGGCTGCAGGCCACCACGTGGAAAGCACAAG | + |
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Preference number: 6 (lower is better) Translates to: EQGAGNRPNARS*AGCRPPRGKHK Trigger: CTTGTGCTTTCCACGTGGTGGCCTGCAGCCCGCCCAGCTCCTTGCATTTGGCCTGTTCCCAGCTCCTTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS TCA 72 bp | AATGAGGTTCCCTCCTGCGGGCTTCTGCTGCCACTGTaGGCAGCAAGCTGTGTGTGGAAGGCACGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: NEVPSCGLLLPL*AASCVWKARLP Trigger: AGGCAGGCGTGCCTTCCACACACAGCTTGCTGCTCACAGTGGCAGCAGAAGCCCGCAGGAGGGAACCTCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS CCA 72 bp | GTACGGCCTATGGTGTGTCCGTGCACAATGACGGCCTaGGCCTCCATTTGCTCCTCCGTGAAGTGGGCGTCA | + |
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Preference number: 6 (lower is better) Translates to: VRPMVCPCTMTA*ASICSSVKWAS Trigger: TGACGCCCACTTCACGGAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCACGGACACACCATAGGCCGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000472379.2 ENST00000493766.5 ENST00000497903.5 ENST00000648560.1 |
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| CDS CAA 72 bp | GGTGTGTCCGTGCACAATGACGGCCTGGGCCTCCATTaGCTCCTCCGTGAAGTGGGCGTCAGACGTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GVSVHNDGLGLH*LLREVGVRRFP Trigger: TGGGAAACGTCTGACGCCCACTTCACGGAGGAGCAAATGGAGGCCCAGGCCGTCATTGTGCACGGACACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000472379.2 ENST00000493766.5 ENST00000497903.5 ENST00000648560.1 |
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| CDS TCA 72 bp | AGGACCACAGCAGTGAACCTGCAGCCACATAGGGAATaGGGTTCCCTCCTGCGGGCTTCTGCTGCCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: RTTAVNLQPHRE*GSLLRASAATV Trigger: CACAGTGGCAGCAGAAGCCCGCAGGAGGGAACCTCATTCCCTATGTGGCTGCAGGTTCACTGCTGTGGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS GCA 72 bp | CACTGTGAGCAGCAAGCTGTGTGTGGAAGGCACGCCTaGCTGCTCCTCACCAGAAATGGAGGGAGGCAACTC | + |
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Preference number: 6 (lower is better) Translates to: HCEQQAVCGRHA*LLLTRNGGRQL Trigger: GAGTTGCCTCCCTCCATTTCTGGTGAGGAGCAGGCAGGCGTGCCTTCCACACACAGCTTGCTGCTCACAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS TCA 72 bp | CACATCGAGGCCTGTACAGCTGACTGCAAGTGTGCATaGAACCCCGGTTCTCTAGCAGGGCCACTAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: HIEACTADCKCA*NPGSLAGPLAA Trigger: TGCTGCTAGTGGCCCTGCTAGAGAACCGGGGTTTCATGCACACTTGCAGTCAGCTGTACAGGCCTCGATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS GCA 72 bp | GAAGAAGGCATCAGGTTGGGCCGAATGAGTAAAGCCTaGATATCAGAGGTGCCCCCGTACCCCCAGGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: EEGIRLGRMSKA*ISEVPPYPQVG Trigger: TCCTACCTGGGGGTACGGGGGCACCTCTGATATGCAGGCTTTACTCATTCGGCCCAACCTGATGCCTTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CAA 90 bp | GAAGCAGAGGAGGCGGCTGGCAGTAGCTCCGAGTCCTCACTTCTCTaGCACTGTGACGGGAGAAGAAATCCAGGATACTACAATGCCACG | + |
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Preference number: 6 (lower is better) Translates to: EAEEAAGSSSESSLL*HCDGRRNPGYYNAT Trigger: CGTGGCATTGTAGTATCCTGGATTTCTTCTCCCGTCACAGTGCAAGAGAAGTGAGGACTCGGAGCTACTGCCAGCCGCCTCCTCTGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS CAA 72 bp | GAGGCGGCTGGCAGTAGCTCCGAGTCCTCACTTCTCTaGCACTGTGACGGGAGAAGAAATCCAGGATACTAC | + |
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Preference number: 6 (lower is better) Translates to: EAAGSSSESSLL*HCDGRRNPGYY Trigger: GTAGTATCCTGGATTTCTTCTCCCGTCACAGTGCAAGAGAAGTGAGGACTCGGAGCTACTGCCAGCCGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489988.5 |
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| CDS GCA 72 bp | AAGCCTTCCAGACCACTTGGTAGTTACATTTCTCATTaGCAGCGGTCGGTGTCAGCACCAGCCCCTGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: KPSRPLGSYISH*QRSVSAPAPVY Trigger: ATACACAGGGGCTGGTGCTGACACCGACCGCTGGCAATGAGAAATGTAACTACCAAGTGGTCTGGAAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CAA 72 bp | ACTCCACTAAATTACAGACTCCATGAGGGCAGGGATTaGCTCACCACTGCATCCCCACTGCCAGTGCAATGC | + |
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Preference number: 6 (lower is better) Translates to: TPLNYRLHEGRD*LTTASPLPVQC Trigger: GCATTGCACTGGCAGTGGGGATGCAGTGGTGAGCAAATCCCTGCCCTCATGGAGTCTGTAATTTAGTGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CAA 90 bp | GAAGAAAGAATGCACTGGCTGGCCCAGAAAAGCCTTCCAGACCACTaGGTAGTTACATTTCTCATTGCCAGCGGTCGGTGTCAGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: EERMHWLAQKSLPDH*VVTFLIASGRCQHQ Trigger: CTGGTGCTGACACCGACCGCTGGCAATGAGAAATGTAACTACCAAGTGGTCTGGAAGGCTTTTCTGGGCCAGCCAGTGCATTCTTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CAA 90 bp | TGTGCATCTACTCCACTAAATTACAGACTCCATGAGGGCAGGGATTaGCTCACCACTGCATCCCCACTGCCAGTGCAATGCCTAACAAAC | + |
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Preference number: 6 (lower is better) Translates to: CASTPLNYRLHEGRD*LTTASPLPVQCLTN Trigger: GTTTGTTAGGCATTGCACTGGCAGTGGGGATGCAGTGGTGAGCAAATCCCTGCCCTCATGGAGTCTGTAATTTAGTGGAGTAGATGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS TCA 72 bp | GGCATGTGGCAACAGTCACTAAGTGGGACAGGAGTCTaGCTGCATGATTTCTGTTGTCCTGGAGACAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: GMWQQSLSGTGV*LHDFCCPGDKQ Trigger: TTGCTTGTCTCCAGGACAACAGAAATCATGCAGTCAGACTCCTGTCCCACTTAGTGACTGTTGCCACATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS GCA 72 bp | TTGTTCCTCCAGGGAAATTCTCCTAGGAAGAAAGAATaGACTGGCTGGCCCAGAAAAGCCTTCCAGACCACT | + |
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Preference number: 6 (lower is better) Translates to: LFLQGNSPRKKE*TGWPRKAFQTT Trigger: AGTGGTCTGGAAGGCTTTTCTGGGCCAGCCAGTGCATTCTTTCTTCCTAGGAGAATTTCCCTGGAGGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CCA 72 bp | GTAACCCGGCACCTGCCACGCAGGCTTTATTCCTTTTaGGTGGCTGAGGACTCACTAAAGCACTCATTAAAA | + |
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Preference number: 6 (lower is better) Translates to: VTRHLPRRLYSF*VAEDSLKHSLK Trigger: TTTTAATGAGTGCTTTAGTGAGTCCTCAGCCACCCAAAAGGAATAAAGCCTGCGTGGCAGGTGCCGGGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS TCA 72 bp | TTTCTGTGCATCTACTCCACTAAATTACAGACTCCATaGGGGCAGGGATTTGCTCACCACTGCATCCCCACT | + |
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Preference number: 6 (lower is better) Translates to: FLCIYSTKLQTP*GQGFAHHCIPT Trigger: AGTGGGGATGCAGTGGTGAGCAAATCCCTGCCCTCATGGAGTCTGTAATTTAGTGGAGTAGATGCACAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CAA 90 bp | AGCCTGGATAAGAGGGAGACCCCGTCGAGATTCCACCACACAGGATaGTGTAGAAACTCCTGCTTTATTTATGCACAAGCTCGATCACAT | + |
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Preference number: 6 (lower is better) Translates to: SLDKRETPSRFHHTG*CRNSCFIYAQARSH Trigger: ATGTGATCGAGCTTGTGCATAAATAAAGCAGGAGTTTCTACACAATCCTGTGTGGTGGAATCTCGACGGGGTCTCCCTCTTATCCAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648560.1 |
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| CDS GCA 72 bp | GATTTGCTCACCACTGCATCCCCACTGCCAGTGCAATaGCTAACAAACAGAGCTCAAGAAACACTGAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: DLLTTASPLPVQ*LTNRAQETLSK Trigger: TTTACTCAGTGTTTCTTGAGCTCTGTTTGTTAGGCATTGCACTGGCAGTGGGGATGCAGTGGTGAGCAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CCA 72 bp | GTAAGAATATGTCTTTACTCTAATGTTGGGGGTAGGTaGGCAGTGAGGATTCCCATGGTAGGAAAGAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: VRICLYSNVGGR*AVRIPMVGKKR Trigger: CCGCTTCTTTCCTACCATGGGAATCCTCACTGCCCACCTACCCCCAACATTAGAGTAAAGACATATTCTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CCA 72 bp | ACTTCTCCATTTGTGTCCTTTTCTACGGTGGAAAGATaGTCACTGGACAACATGTCGGTATCCCATCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TSPFVSFSTVER*SLDNMSVSHLH Trigger: GTGGAGATGGGATACCGACATGTTGTCCAGTGACCATCTTTCCACCGTAGAAAAGGACACAAATGGAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497903.5 |
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| CDS CAA 72 bp | CCACCGGGCCTGGCCGAGTCCCTGCTTTCAATTATTTaGGGTATATACCCAGAAACAGCATTGCTAAATCAT | + |
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Preference number: 6 (lower is better) Translates to: PPGLAESLLSII*GIYPETALLNH Trigger: ATGATTTAGCAATGCTGTTTCTGGGTATATACCCAAAATAATTGAAAGCAGGGACTCGGCCAGGCCCGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CAA 72 bp | AAGAGGGAGACCCCGTCGAGATTCCACCACACAGGATaGTGTAGAAACTCCTGCTTTATTTATGCACAAGCT | + |
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Preference number: 6 (lower is better) Translates to: KRETPSRFHHTG*CRNSCFIYAQA Trigger: AGCTTGTGCATAAATAAAGCAGGAGTTTCTACACAATCCTGTGTGGTGGAATCTCGACGGGGTCTCCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648560.1 |
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| CDS CAA 90 bp | ATGCATGAGCCACCGGGCCTGGCCGAGTCCCTGCTTTCAATTATTTaGGGTATATACCCAGAAACAGCATTGCTAAATCATATGGTAACT | + |
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Preference number: 6 (lower is better) Translates to: MHEPPGLAESLLSII*GIYPETALLNHMVT Trigger: AGTTACCATATGATTTAGCAATGCTGTTTCTGGGTATATACCCAAAATAATTGAAAGCAGGGACTCGGCCAGGCCCGGTGGCTCATGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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| CDS CAA 72 bp | GTTCCCCATGCTCAGCAACAACCTCCCCTTTATAATTaGTTCCTCCAGGGAAATTCTCCTAGGAAGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: VPHAQQQPPLYN*FLQGNSPRKKE Trigger: TTCTTTCTTCCTAGGAGAATTTCCCTGGAGGAACAAATTATAAAGGGGAGGTTGTTGCTGAGCATGGGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462327.1 |
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