RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DELE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000081791

Ensembl transcript IDs: ENST00000194118.8, ENST00000432126.7, ENST00000502729.1, ENST00000506775.1, ENST00000507481.2, ENST00000508751.1, ENST00000509110.1

Found 458 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAAAGGTCTCATTGGTGAGGGCGCCGGGCTTTAACCCAGCATCCTaGCCCAGGCTGGCCCTGCTGATGGGAGCCACCTCCCTCTCGTCC +
Preference number: 1 (lower is better)
Translates to: TKVSLVRAPGFNPAS*PRLALLMGATSLSS
Trigger: GGACGAGAGGGAGGTGGCTCCCATCAGCAGGGCCAGCCTGGGTCAGGATGCTGGGTTAAAGCCCGGCGCCCTCACCAATGAGACCTTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 90 bp GTAGTGACTGAGTGGGAGGGAGAGCCACTCAGGGAGGGCTGCATCTaGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGCC +
Preference number: 1 (lower is better)
Translates to: VVTEWEGEPLREGCI*PSPQDAQWPDCEPA
Trigger: GGCTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCCTCCCTGAGTGGCTCTCCCTCCCACTCAGTCACTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR TCA 90 bp GAGTGCCATCTGTGGAAGGTGGCCATGTGCAGGGTCCAACAGTGGTaGGCCAGTGTGCAGGGCAGCCCTGAAAAGGAGGCAGGGAGCAGG +
Preference number: 1 (lower is better)
Translates to: ECHLWKVAMCRVQQW*ASVQGSPEKEAGSR
Trigger: CCTGCTCCCTGCCTCCTTTTCAGGGCTGCCCTGCACACTGGCTCACCACTGTTGGACCCTGCACATGGCCACCTTCCACAGATGGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR TCA 90 bp GGGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTaGACCAGCCCTCGGCCCCAGCTATGGCTAGAAGGAAGTAGTCAG +
Preference number: 1 (lower is better)
Translates to: GLHLAFTTGRPVARL*TSPRPQLWLEGSSQ
Trigger: CTGACTACTTCCTTCTAGCCATAGCTGGGGCCGAGGGCTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR GCA 90 bp TGTGGAAGGTGGCCATGTGCAGGGTCCAACAGTGGTGAGCCAGTGTaGAGGGCAGCCCTGAAAAGGAGGCAGGGAGCAGGCGAGGAGATG +
Preference number: 1 (lower is better)
Translates to: CGRWPCAGSNSGEPV*RAALKRRQGAGEEM
Trigger: CATCTCCTCGCCTGCTCCCTGCCTCCTTTTCAGGGCTGCCCTGCACACTGGCTCACCACTGTTGGACCCTGCACATGGCCACCTTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR GCA 90 bp AGCTCAGTAGTGACTGAGTGGGAGGGAGAGCCACTCAGGGAGGGCTaGATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAA +
Preference number: 1 (lower is better)
Translates to: SSVVTEWEGEPLREG*IWPSPQDAQWPDCE
Trigger: TTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCCTCCCTGAGTGGCTCTCCCTCCCACTCAGTCACTACTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR GCA 90 bp CTTGCACTCAGTGCTGGGGACACTGGAATACAAAGACAAGGACCCTaGTCCCAAGGAGTGCCATCTGTGGAAGGTGGCCATGTGCAGGGT +
Preference number: 1 (lower is better)
Translates to: LALSAGDTGIQRQGP*SQGVPSVEGGHVQG
Trigger: ACCCTGCACATGGCCACCTTCCACAGATGGCACTCCTTGGGAGCAGGGTCCTTGTCTTTGTATTCCAGTGTCCCCAGCACTGAGTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR TCA 90 bp CAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTaGCTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTG +
Preference number: 1 (lower is better)
Translates to: QVAEPDLGLHTLSSS*LYWRRCLRFGGRWV
Trigger: CACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR GCA 90 bp ACCCTGGCCCAGCGACTCATAAAGTCATGCAACCATGAGCATCACTaGCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAA +
Preference number: 1 (lower is better)
Translates to: TLAQRLIKSCNHEHH*LLGQSEHKGPLCGE
Trigger: TTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTTGCATGACTTTATGAGTCGCTGGGCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR GCA 90 bp AACCCTGAGCTTGAAACCTCAGGTTTCCTACCCTGCATGGGGCCTTaGACTCAGTGCTGGGGACACTGGAATACAAAGACAAGGACCCTG +
Preference number: 1 (lower is better)
Translates to: NPELETSGFLPCMGP*TQCWGHWNTKTRTL
Trigger: CAGGGTCCTTGTCTTTGTATTCCAGTGTCCCCAGCACTGAGTGCAAGGCCCCATGCAGGGTAGGAAACCTGAGGTTTCAAGCTCAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 90 bp TTGGCACCCCAAATTGAATCAGTACTTAGCTCAGTAGTGACTGAGTaGGAGGGAGAGCCACTCAGGGAGGGCTGCATCTGGCCTTCACCA +
Preference number: 1 (lower is better)
Translates to: LAPQIESVLSSVVTE*EGEPLREGCIWPSP
Trigger: TGGTGAAGGCCAGATGCAGCCCTCCCTGAGTGGCTCTCCCTCCCACTCAGTCACTACTGAGCTAAGTACTGATTCAATTTGGGGTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR TCA 90 bp GGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGACTCAAATTGTaGTATCTCTCTGAGAACCCACAGGCTCCCTCTTTAGGGCTGAGG +
Preference number: 1 (lower is better)
Translates to: GKVGGYLASSLGLKL*YLSENPQAPSLGLR
Trigger: CCTCAGCCCTAAAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR TCA 90 bp TGGGAACCTGAACTCCCGCTGGAATTTCTACCTGGAAAGGGTTGCTaGTGCTCTATTTTTGTTATCCAACCTCCTGCCCGCTCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: WEPELPLEFLPGKGC*CSIFVIQPPARSGP
Trigger: GGGGCCAGAGCGGGCAGGAGGTTGGATAACAAAAATAGAGCATCAGCAACCCTTTCCAGGTAGAAATTCCAGCGGGAGTTCAGGTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 90 bp TATAGGGAGTCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTaGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGAC +
Preference number: 1 (lower is better)
Translates to: YRESGHSFKVTWPGK*QSQTWVFTHFPLLD
Trigger: GTCAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGACTCCCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR CCA 90 bp CTGAGGAAACAATATAGGGAGTCAGGTCACAGCTTCAAGGTGACATaGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTT +
Preference number: 1 (lower is better)
Translates to: LRKQYRESGHSFKVT*PGKWQSQTWVFTHF
Trigger: AAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGACTCCCTATATTGTTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR GCA 90 bp GGTGGGCTCTCTATCCCTCCCAGACCCCACTCTCAACCACATCTATaGTATTCAACTTGGGCTAACATCCAGAAGCCAGGGAATAGCTAT +
Preference number: 1 (lower is better)
Translates to: GGLSIPPRPHSQPHL*YSTWANIQKPGNSY
Trigger: ATAGCTATTCCCTGGCTTCTGGATGTTAGCCCAAGTTGAATAGCATAGATGTGGTTGAGAGTGGGGTCTGGGAGGGATAGAGAGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 90 bp CACACTTTCCTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTaGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGACTCAAA +
Preference number: 1 (lower is better)
Translates to: HTFLFLTVLAQVLKI*GKVGGYLASSLGLK
Trigger: TTTGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR CCA 90 bp TACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTaGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACC +
Preference number: 1 (lower is better)
Translates to: YWRRCLRFGGRWVGI*PLLWDSNCDISLRT
Trigger: GGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR CCA 90 bp CTCGAGGATGGCCTAATTCAGAGTTTCCTAAGTGTCAGCCATTCATaGAACCACCCCTGTGATTTTTGCTACCTCTCTGGATCTGTGCCC +
Preference number: 1 (lower is better)
Translates to: LEDGLIQSFLSVSHS*NHPCDFCYLSGSVP
Trigger: GGGCACAGATCCAGAGAGGTAGCAAAAATCACAGGGGTGGTTCCATGAATGGCTGACACTTAGGAAACTCTGAATTAGGCCATCCTCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR TCA 90 bp CCCATGGGTAGGACAGTCATAATGCTTTCACATAAAATTGCAGTATaGACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCAG +
Preference number: 1 (lower is better)
Translates to: PMGRTVIMLSHKIAV*TDGQELWARSQEAQ
Trigger: CTGGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATACTGCAATTTTATGTGAAAGCATTATGACTGTCCTACCCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR TCA 90 bp GCACCAGGGTCTCTGGACCCTTCAGTAGGGTTTTTCATAGGTCACTaGATGCATCCTTTGGTGCACAGACCAGAAATGACTGTGAATGCA +
Preference number: 1 (lower is better)
Translates to: APGSLDPSVGFFIGH*MHPLVHRPEMTVNA
Trigger: TGCATTCACAGTCATTTCTGGTCTGTGCACCAAAGGATGCATTCAGTGACCTATGAAAAACCCTACTGAAGGGTCCAGAGACCCTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 90 bp ATGAAAACGATTATGAGCCCACGGGGGATGAACAGAGGTGAATGGTaGGCTAGTCTCGAGGATGGCCTAATTCAGAGTTTCCTAAGTGTC +
Preference number: 1 (lower is better)
Translates to: MKTIMSPRGMNRGEW*ASLEDGLIQSFLSV
Trigger: GACACTTAGGAAACTCTGAATTAGGCCATCCTCGAGACTAGCCCACCATTCACCTCTGTTCATCCCCCGTGGGCTCATAATCGTTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 90 bp GAAATGAAAACGATTATGAGCCCACGGGGGATGAACAGAGGTGAATaGTGGGCTAGTCTCGAGGATGGCCTAATTCAGAGTTTCCTAAGT +
Preference number: 1 (lower is better)
Translates to: EMKTIMSPRGMNRGE*WASLEDGLIQSFLS
Trigger: ACTTAGGAAACTCTGAATTAGGCCATCCTCGAGACTAGCCCACCATTCACCTCTGTTCATCCCCCGTGGGCTCATAATCGTTTTCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 90 bp AAAGTACCTACTATGTGCTGGGTAGGCTTGGTGCTGGGCATTGGGTaGGGGGAGTTGAGTATAATCACTCACTTATTTGTTGAATGTATA +
Preference number: 1 (lower is better)
Translates to: KVPTMCWVGLVLGIG*GELSIITHLFVECI
Trigger: TATACATTCAACAAATAAGTGAGTGATTATACTCAACTCCCCCCACCCAATGCCCAGCACCAAGCCTACCCAGCACATAGTAGGTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR TCA 90 bp AGGGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGCTTGGGCTCCCCGGGTaGAAGAGAGGTGCTAGGAAA +
Preference number: 2 (lower is better)
Translates to: RAASGLHHRTPSGQTVNQLGLPG*KRGARK
Trigger: TTTCCTAGCACCTCTCTTTCACCCGGGGAGCCCAAG...CTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR TCA 90 bp GGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGCCACACTTTCCTCTTCTTaGCTGTACTGGCGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: GCIWPSPQDAQWPDCEPATLSSS*LYWRRC
Trigger: GCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGT...GGCTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CCA 90 bp AGGGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGAGCTTCAAGGTGACATaGCCAGGCAAGTGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: RAASGLHHRTPSGQTVNQSFKVT*PGKWQS
Trigger: GCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT...CTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR GCA 90 bp GGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGCCGAGGGCAGACACCATTaGCTTTGGTCTACAACTGAG +
Preference number: 2 (lower is better)
Translates to: GCIWPSPQDAQWPDCEPAEGRHH*LWSTTE
Trigger: CTCAGTTGTAGACCAAAGGCAATGGTGTCTGCCCTC...GGCTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CCA 90 bp AGGGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGAGCATCACTGCCTCCTaGGCCAAAGTGAGCACAAAG +
Preference number: 2 (lower is better)
Translates to: RAASGLHHRTPSGQTVNQSITAS*AKVSTK
Trigger: CTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT...CTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CCA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAAACCTCCTGCCCGCTCTaGCCCCTAAGAGGCACCAGG +
Preference number: 2 (lower is better)
Translates to: SITASWAKVSTKVLSVVKTSCPL*PLRGTR
Trigger: CCTGGTGCCTCTTAGGGGCCAGAGCGGGCAGGAGGT...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGACATGGCCAGGCAAGTaGCAGAGCCAGACCTGGGTC +
Preference number: 2 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLTWPGK*QSQTWV
Trigger: GACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGT...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGAGCTTCAAGGTGACATaGCCAGGCAAGTGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWSFKVT*PGKWQS
Trigger: GCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR TCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGTCACAGCTTCAAGGTaGCATGGCCAGGCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLVTASR*HGQASG
Trigger: GCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGAC...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGATGGACAAGAACTCTaGGCCAGGAGTCAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLDGQEL*ARSQEA
Trigger: GGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATC...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGCAGGTGCTTAAGATTTaGGGGAAGGTGGGTGGGTAT +
Preference number: 2 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWQVLKI*GKVGGY
Trigger: ATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp AAATTGCAGTATGAACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCACATGGCCAGGCAAGTaGCAGAGCCAGACCTGGGTC +
Preference number: 2 (lower is better)
Translates to: KLQYELMDKNSGPGVRRPTWPGK*QSQTWV
Trigger: GACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGT...GGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATACTGCAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp GAGCTTCCCACAAAGGTCTCATTGGTGAGGGCGCCGGGCTTTAACCCAGCATCCTTCTTGCCTTTGAATTaGCCAGGCTGGTTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: ELPTKVSLVRAPGFNPASFLPLN*PGWLVS
Trigger: GGAGACCAACCAGCCTGGCCAATTCAAAGGCAAGAA...GGATGCTGGGTTAAAGCCCGGCGCCCTCACCAATGAGACCTTTGTGGGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR TCA 90 bp AAGTCATGCAACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCCTGGGCCAAAGTaGGCACAAAGGTCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: KSCNHEHHCLLGQSEHKGPPGPK*AQRSSL
Trigger: CAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGG...ACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTTGCATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp TATGAACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCAGGTCCTCAAGGTGGGTGGGTATCTaGCCTCTTCTTTGGGACTCA +
Preference number: 2 (lower is better)
Translates to: YELMDKNSGPGVRRPRSSRWVGI*PLLWDS
Trigger: TGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCT...TGAGGACCTGGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp TGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTTGGGGGAAGGTGGGTaGGTATCTGGCCTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: WRRCLRFGGRWVGIWPLLLGEGG*VSGLFF
Trigger: AAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAA...AAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGTTGGGGGAAGGTGGGTaGGTATCTGGCCTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLLGEGG*VSGLFF
Trigger: AAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAA...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACAGGTGCTTAAGATTTaGGGGAAGGTGGGTGGGTAT +
Preference number: 2 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTQVLKI*GKVGGY
Trigger: ATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp TATGAACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCAGGTCCTCAAGCATCACTGCCTCCTaGGCCAAAGTGAGCACAAAG +
Preference number: 2 (lower is better)
Translates to: YELMDKNSGPGVRRPRSSSITAS*AKVSTK
Trigger: CTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT...TGAGGACCTGGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR CAA 90 bp TCCCGCTGGAATTTCTACCTGGAAAGGGTTGCTGATGCTCTATTTTaGTTATCCAACCTCCTGCCCGCTCTGGCCCCTAAGAGGCACCAG +
Preference number: 2 (lower is better)
Translates to: SRWNFYLERVADALF*LSNLLPALAPKRHQ
Trigger: CTGGTGCCTCTTAGGGGCCAGAGCGGGCAGGAGGTTGGATAACAAAAATAGAGCATCAGCAACCCTTTCCAGGTAGAAATTCCAGCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR TCA 90 bp GGTGAAATGCCCTTGCATTTGTCTTCTAAGGTAGGAGGGCAGACACCATTGCCTGTCACAGCTTCAAGGTaGCATGGCCAGGCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: GEMPLHLSSKVGGQTPLPVTASR*HGQASG
Trigger: GCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGAC...AGGCAATGGTGTCTGCCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR TCA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGTTGGGACTCAAATTGTaGTATCTCTCTGAGAACCCA +
Preference number: 2 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWLGLKL*YLSENP
Trigger: TGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAA...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp GAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAAACCTGAACTCCCGCTaGAATTTCTACCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: EHHCLLGQSEHKGPLCGENLNSR*NFYLER
Trigger: CCTTTCCAGGTAGAAATTCCAGCGGGAGTTCAGGTT...TTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CCA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAAGTACGTGAAATTGCTTaGGAACCTGAACTCCCGCTG +
Preference number: 2 (lower is better)
Translates to: SITASWAKVSTKVLSVVKVREIA*EPELPL
Trigger: CAGCGGGAGTTCAGGTTCCCAAGCAATTTCACGTAC...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR TCA 90 bp AAATTGCAGTATGAACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCAGGTCCTCTCTGTGGTaGAATGCCCTTGCATTTGTC +
Preference number: 2 (lower is better)
Translates to: KLQYELMDKNSGPGVRRPRSSLW*NALAFV
Trigger: GACAAATGCAAGGGCATTTCACCACAGAGAGGACCT...GGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATACTGCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR GCA 90 bp TTTTGGTCCCTTGACAACACCTTTCTCACGACTCTGCCATCCTTCCCTTTCCACAACCATGAGCATCACTaGCTCCTGGGCCAAAGTGAG +
Preference number: 2 (lower is better)
Translates to: FWSLDNTFLTTLPSFPFHNHEHH*LLGQSE
Trigger: CTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTT...GTGGAAAGGGAAGGATGGCAGAGTCGTGAGAAAGGTGTTGTCAAGGGACCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CCA 90 bp TGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTACACATCCAGGCATTTaGGCAAGAAACTTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: WRRCLRFGGRWVGIWPLLTHPGI*ARNFFQ
Trigger: CTGGAAGAAGTTTCTTGCCCAAATGCCTGGATGTGT...AAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507481.2
3UTR CAA 90 bp TGGATCAAGACCGCAGTGACTGAACAGCCAAGGATTTTTGGTCCCTaGACAACACCTTTCTCACGACTCTGCCATCCTTCCCTTTCCACA +
Preference number: 2 (lower is better)
Translates to: WIKTAVTEQPRIFGP*TTPFSRLCHPSLST
Trigger: TGTGGAAAGGGAAGGATGGCAGAGTCGTGAGAAAGGTGTTGTCAAGGGACCAAAAATCCTTGGCTGTTCAGTCACTGCGGTCTTGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGTTTTTGCTACCTCTCTaGATCTGTGCCCACTTTTAC +
Preference number: 2 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLFLLPL*ICAHFY
Trigger: GTAAAAGTGGGCACAGATCCAGAGAGGTAGCAAAAA...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR TCA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAATTGGGACTCAAATTGTaGTATCTCTCTGAGAACCCA +
Preference number: 2 (lower is better)
Translates to: SITASWAKVSTKVLSVVKLGLKL*YLSENP
Trigger: TGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAA...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR TCA 90 bp CTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGTCACAGCTTCAAGGTaGCATGGCCAGGCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: LSSFKTPSIQSTFTLPWVVTASR*HGQASG
Trigger: GCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGAC...TACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR TCA 90 bp ACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCAGACAAAGGCTAAGGTaGGCACCAGGGTCTCTGGAC +
Preference number: 2 (lower is better)
Translates to: TFLAHVSQMGTSKSILSSRQRLR*APGSLD
Trigger: GTCCAGAGACCCTGGTGCTCACCTTAGCCTTTGTCT...GCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CCA 90 bp ACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTATCTGGCCTCTTCTTTaGGACTCAAATTGTGATATC +
Preference number: 2 (lower is better)
Translates to: TWPGKWQSQTWVFTHFPLIWPLL*DSNCDI
Trigger: GATATCACAATTTGAGTCCCAAAGAAGAGGCCAGAT...AAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp TGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTATCTGGCCTCTTCTTTaGGACTCAAATTGTGATATC +
Preference number: 2 (lower is better)
Translates to: WRRCLRFGGRWVGIWPLLIWPLL*DSNCDI
Trigger: GATATCACAATTTGAGTCCCAAAGAAGAGGCCAGAT...AAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp TACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGGATGGACAAGAACTCTaGGCCAGGAGTCAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: YSPALRLLAFNLHLLSHGDGQEL*ARSQEA
Trigger: GGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATC...CCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp ATGAACAGAGGTGAATGGTGGGCTAGTCTCGAGGATGGCCTAATTCAGAGTTTCGTACGTGAAATTGCTTaGGAACCTGAACTCCCGCTG +
Preference number: 2 (lower is better)
Translates to: MNRGEWWASLEDGLIQSFVREIA*EPELPL
Trigger: CAGCGGGAGTTCAGGTTCCCAAGCAATTTCACGTAC...GAAACTCTGAATTAGGCCATCCTCGAGACTAGCCCACCATTCACCTCTGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR TCA 90 bp ACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCACACTTTCCTCTTCTTaGCTGTACTGGCGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: TFLAHVSQMGTSKSILSSTLSSS*LYWRRC
Trigger: GCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGT...GCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR GCA 90 bp CCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCCTGTACTGGCGCAGGTaGTTAAGATTTGGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: PKWGPQNLYSPALRLLAFLYWRR*LRFGGR
Trigger: CCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAG...GAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR GCA 90 bp CCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAACCATGAGCATCACTaGCTCCTGGGCCAAAGTGAG +
Preference number: 2 (lower is better)
Translates to: PKWGPQNLYSPALRLLAFNHEHH*LLGQSE
Trigger: CTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTT...GAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp ACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCAGGTGGGTGGGTATCTaGCCTCTTCTTTGGGACTCA +
Preference number: 2 (lower is better)
Translates to: TFLAHVSQMGTSKSILSSRWVGI*PLLWDS
Trigger: TGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCT...GCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR GCA 90 bp TCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCTGTACTGGCGCAGGTaGTTAAGATTTGGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: SQMGTSKSILSSFKTPSILYWRR*LRFGGR
Trigger: CCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAG...AATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR GCA 90 bp CAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATGTTATCCAACCTCCTaGCCGCTCTGGCCCCTAAGA +
Preference number: 2 (lower is better)
Translates to: QMGTSKSILSSFKTPSIQCYPTS*PLWPLR
Trigger: TCTTAGGGGCCAGAGCGGGCAGGAGGTTGGATAACA...TTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CCA 90 bp CACACTTTCCTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGATCTGGCCTCTTCTTTaGGACTCAAATTGTGATATC +
Preference number: 2 (lower is better)
Translates to: HTFLFLTVLAQVLKIWGKIWPLL*DSNCDI
Trigger: GATATCACAATTTGAGTCCCAAAGAAGAGGCCAGAT...CTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp GCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCAGGTGCTTAAGATTTaGGGGAAGGTGGGTGGGTAT +
Preference number: 2 (lower is better)
Translates to: AHVSQMGTSKSILSSFKTQVLKI*GKVGGY
Trigger: ATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG...AGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR TCA 90 bp ATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGAGGTCCTCTCTGTGGTaGAATGCCCTTGCATTTGTC +
Preference number: 2 (lower is better)
Translates to: ILSSFKTPSIQSTFTLPWRSSLW*NALAFV
Trigger: GACAAATGCAAGGGCATTTCACCACAGAGAGGACCT...CCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR TCA 90 bp TGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGAAATTGCTTGGGAACCTaGACTCCCGCTGGAATTTCT +
Preference number: 2 (lower is better)
Translates to: WHMFPKWGPQNLYSPALRNCLGT*TPAGIS
Trigger: AGAAATTCCAGCGGGAGTTCAGGTTCCCAAGCAATT...TCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR TCA 90 bp ATGAACAGAGGTGAATGGTGGGCTAGTCTCGAGGATGGCCTAATTCAGAGTTTCTCTAAAATCTTCTTGTaGACCAGGGATACACACATC +
Preference number: 2 (lower is better)
Translates to: MNRGEWWASLEDGLIQSFSKIFL*TRDTHI
Trigger: GATGTGTGTATCCCTGGTTCACAAGAAGATTTTAGA...GAAACTCTGAATTAGGCCATCCTCGAGACTAGCCCACCATTCACCTCTGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR TCA 90 bp CCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCTTGGGACTCAAATTGTaGTATCTCTCTGAGAACCCA +
Preference number: 2 (lower is better)
Translates to: PKWGPQNLYSPALRLLAFLGLKL*YLSENP
Trigger: TGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAA...GAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR TCA 90 bp CCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCCCTTTGGTCTACAACTaGGGAAACAATATAGGGAGT +
Preference number: 2 (lower is better)
Translates to: PKWGPQNLYSPALRLLAFPLVYN*GNNIGS
Trigger: ACTCCCTATATTGTTTCCTCAGTTGTAGACCAAAGG...GAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp ACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCAGACACCATTGCCTTTaGTCTACAACTGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: TFLAHVSQMGTSKSILSSRHHCL*STTEET
Trigger: TGTTTCCTCAGTTGTAGACCAAAGGCAATGGTGTCT...GCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR TCA 90 bp AGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGGACAGCCTTTGGTCTACAACTaGGGAAACAATATAGGGAGT +
Preference number: 2 (lower is better)
Translates to: SFKTPSIQSTFTLPWVGQPLVYN*GNNIGS
Trigger: ACTCCCTATATTGTTTCCTCAGTTGTAGACCAAAGG...CTGTCCTACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp CAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTTGGGGGAAGGTGGGTaGGTATCTGGCCTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: QNLYSPALRLLAFNLHLLLGEGG*VSGLFF
Trigger: AAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAA...GAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp GCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTAGACACCATTGCCTTTaGTCTACAACTGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: AHVSQMGTSKSILSSFKTRHHCL*STTEET
Trigger: TGTTTCCTCAGTTGTAGACCAAAGGCAATGGTGTCT...AGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp TGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGAAGACACCATTGCCTTTaGTCTACAACTGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: WHMFPKWGPQNLYSPALRRHHCL*STTEET
Trigger: TGTTTCCTCAGTTGTAGACCAAAGGCAATGGTGTCT...TCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CCA 90 bp GGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATGCTGGAATTTCTACCTaGAAAGGGTTGCTGATGCTC +
Preference number: 2 (lower is better)
Translates to: GPQNLYSPALRLLAFNLHAGIST*KGLLML
Trigger: GAGCATCAGCAACCCTTTCCAGGTAGAAATTCCAGC...ATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR TCA 90 bp TGGAGGACTTCTTGGAACCTCAAATATGCTGATGTGTATTGTGAATCTATAAAAAGGTCCTCTCTGTGGTaGAATGCCCTTGCATTTGTC +
Preference number: 2 (lower is better)
Translates to: WRTSWNLKYADVYCESIKRSSLW*NALAFV
Trigger: GACAAATGCAAGGGCATTTCACCACAGAGAGGACCT...TTTTATAGATTCACAATACACATCAGCATATTTGAGGTTCCAAGAAGTCCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CCA 90 bp GATGTGTATTGTGAATCTATAAAAAGGGGACGTCTGGTGCAGCATTTCCCAAACACACACATCAGACATTaGCAAACAGTAGTACAGATT +
Preference number: 2 (lower is better)
Translates to: DVYCESIKRGRLVQHFPNTHIRH*QTVVQI
Trigger: AATCTGTACTACTGTTTGCCAATGTCTGATGTGTGT...GTTTGGGAAATGCTGCACCAGACGTCCCCTTTTTATAGATTCACAATACACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR TCA 90 bp CAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCCCTTTGGTCTACAACTaGGGAAACAATATAGGGAGT +
Preference number: 2 (lower is better)
Translates to: QNLYSPALRLLAFNLHLLPLVYN*GNNIGS
Trigger: ACTCCCTATATTGTTTCCTCAGTTGTAGACCAAAGG...GAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR TCA 90 bp CAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCCCTGGAAAGGGTTGCTaGTGCTCTATTTTTGTTATC +
Preference number: 2 (lower is better)
Translates to: QNLYSPALRLLAFNLHLLPGKGC*CSIFVI
Trigger: GATAACAAAAATAGAGCATCAGCAACCCTTTCCAGG...GAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 72 bp GAGGGCTGCATCTGGCCTTCACCACAGGACGCCCAGTaGCCAGACTGTGAACCAGCCCTCGGCCCCAGCTAT +
Preference number: 3 (lower is better)
Translates to: EGCIWPSPQDAQ*PDCEPALGPSY
Trigger: ATAGCTGGGGCCGAGGGCTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR TCA 72 bp CTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTaGACCAGCCCTCGGCCCCAGCTATGGCTAGAAGGA +
Preference number: 3 (lower is better)
Translates to: LAFTTGRPVARL*TSPRPQLWLEG
Trigger: TCCTTCTAGCCATAGCTGGGGCCGAGGGCTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR GCA 72 bp TGGCCATGTGCAGGGTCCAACAGTGGTGAGCCAGTGTaGAGGGCAGCCCTGAAAAGGAGGCAGGGAGCAGGC +
Preference number: 3 (lower is better)
Translates to: WPCAGSNSGEPV*RAALKRRQGAG
Trigger: GCCTGCTCCCTGCCTCCTTTTCAGGGCTGCCCTGCACACTGGCTCACCACTGTTGGACCCTGCACATGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 72 bp GCCAGGCTGGTTGGTCTCCACTCAGTCATGGGATTGTaGGGGGTGGGCGGTGGGCTCTCTATCCCTCCCAGA +
Preference number: 3 (lower is better)
Translates to: ARLVGLHSVMGL*GVGGGLSIPPR
Trigger: TCTGGGAGGGATAGAGAGCCCACCGCCCACCCCCCACAATCCCATGACTGAGTGGAGACCAACCAGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR TCA 72 bp CTGTGGAAGGTGGCCATGTGCAGGGTCCAACAGTGGTaGGCCAGTGTGCAGGGCAGCCCTGAAAAGGAGGCA +
Preference number: 3 (lower is better)
Translates to: LWKVAMCRVQQW*ASVQGSPEKEA
Trigger: TGCCTCCTTTTCAGGGCTGCCCTGCACACTGGCTCACCACTGTTGGACCCTGCACATGGCCACCTTCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 72 bp CCCTGCATGGGGCCTTGCACTCAGTGCTGGGGACACTaGAATACAAAGACAAGGACCCTGCTCCCAAGGAGT +
Preference number: 3 (lower is better)
Translates to: PCMGPCTQCWGH*NTKTRTLLPRS
Trigger: ACTCCTTGGGAGCAGGGTCCTTGTCTTTGTATTCCAGTGTCCCCAGCACTGAGTGCAAGGCCCCATGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CAA 90 bp GTCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGCACACTTTCCTCTTCTaGACTGTACTGGCGCAGGTG +
Preference number: 3 (lower is better)
Translates to: VRSQLQGDMARQVAEPDLHTFLF*TVLAQV
Trigger: CACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG...CAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR TCA 72 bp GGAAACAATATAGGGAGTCAGGTCACAGCTTCAAGGTaGCATGGCCAGGCAAGTGGCAGAGCCAGACCTGGG +
Preference number: 3 (lower is better)
Translates to: GNNIGSQVTASR*HGQASGRARPG
Trigger: CCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGACTCCCTATATTGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR GCA 72 bp CTGGAATACAAAGACAAGGACCCTGCTCCCAAGGAGTaGCATCTGTGGAAGGTGGCCATGTGCAGGGTCCAA +
Preference number: 3 (lower is better)
Translates to: LEYKDKDPAPKE*HLWKVAMCRVQ
Trigger: TTGGACCCTGCACATGGCCACCTTCCACAGATGGCACTCCTTGGGAGCAGGGTCCTTGTCTTTGTATTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR GCA 72 bp ACAGGGAGGGCACACGGTGACATTTCACGCAGAGGGTaGCCCAGGAAGGCTCAAAAGCAATCTGTAGGGAAA +
Preference number: 3 (lower is better)
Translates to: TGRAHGDISRRG*PRKAQKQSVGK
Trigger: TTTCCCTACAGATTGCTTTTGAGCCTTCCTGGGGCACCCTCTGCGTGAAATGTCACCGTGTGCCCTCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 72 bp CAATATAGGGAGTCAGGTCACAGCTTCAAGGTGACATaGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTC +
Preference number: 3 (lower is better)
Translates to: QYRESGHSFKVT*PGKWQSQTWVF
Trigger: GAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGACTCCCTATATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR CCA 72 bp ACCCTGAGCTTGAAACCTCAGGTTTCCTACCCTGCATaGGGCCTTGCACTCAGTGCTGGGGACACTGGAATA +
Preference number: 3 (lower is better)
Translates to: TLSLKPQVSYPA*GLALSAGDTGI
Trigger: TATTCCAGTGTCCCCAGCACTGAGTGCAAGGCCCCATGCAGGGTAGGAAACCTGAGGTTTCAAGCTCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CAA 90 bp GAGCTTCCCACAAAGGTCTCATTGGTGAGGGCGCCGGGCTTTAACCCAGCATCCCAAATCTTCTTGCCTTaGAATTGGCCAGGCTGGTTG +
Preference number: 3 (lower is better)
Translates to: ELPTKVSLVRAPGFNPASQIFLP*NWPGWL
Trigger: CAACCAGCCTGGCCAATTCAAAGGCAAGAAGATTTG...GGATGCTGGGTTAAAGCCCGGCGCCCTCACCAATGAGACCTTTGTGGGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR TCA 72 bp GAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTaGCTGTACTGGCGCAGGTGCTTAAGATTTGGGGGA +
Preference number: 3 (lower is better)
Translates to: EPDLGLHTLSSS*LYWRRCLRFGG
Trigger: TCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR GCA 72 bp CAGCGACTCATAAAGTCATGCAACCATGAGCATCACTaGCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTC +
Preference number: 3 (lower is better)
Translates to: QRLIKSCNHEHH*LLGQSEHKGPL
Trigger: GAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTTGCATGACTTTATGAGTCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR GCA 72 bp CTTGAAACCTCAGGTTTCCTACCCTGCATGGGGCCTTaGACTCAGTGCTGGGGACACTGGAATACAAAGACA +
Preference number: 3 (lower is better)
Translates to: LETSGFLPCMGP*TQCWGHWNTKT
Trigger: TGTCTTTGTATTCCAGTGTCCCCAGCACTGAGTGCAAGGCCCCATGCAGGGTAGGAAACCTGAGGTTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 72 bp ACGATTATGAGCCCACGGGGGATGAACAGAGGTGAATaGTGGGCTAGTCTCGAGGATGGCCTAATTCAGAGT +
Preference number: 3 (lower is better)
Translates to: TIMSPRGMNRGE*WASLEDGLIQS
Trigger: ACTCTGAATTAGGCCATCCTCGAGACTAGCCCACCATTCACCTCTGTTCATCCCCCGTGGGCTCATAATCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CAA 90 bp GAGCTTCCCACAAAGGTCTCATTGGTGAGGGCGCCGGGCTTTAACCCAGCATCCTCTACCTGGAAAGGGTaGCTGATGCTCTATTTTTGT +
Preference number: 3 (lower is better)
Translates to: ELPTKVSLVRAPGFNPASSTWKG*LMLYFC
Trigger: ACAAAAATAGAGCATCAGCAACCCTTTCCAGGTAGA...GGATGCTGGGTTAAAGCCCGGCGCCCTCACCAATGAGACCTTTGTGGGAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CAA 90 bp CACACTTTCCTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGCACACTTTCCTCTTCTaGACTGTACTGGCGCAGGTG +
Preference number: 3 (lower is better)
Translates to: HTFLFLTVLAQVLKIWGKHTFLF*TVLAQV
Trigger: CACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG...CTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR GCA 72 bp GCATCCTTTGGTGCACAGACCAGAAATGACTGTGAATaGATCCAAGACTCATCTGTGAGGCTACCAAGCGGG +
Preference number: 3 (lower is better)
Translates to: ASFGAQTRNDCE*IQDSSVRLPSG
Trigger: CCCGCTTGGTAGCCTCACAGATGAGTCTTGGATGCATTCACAGTCATTTCTGGTCTGTGCACCAAAGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 72 bp ATTATGAGCCCACGGGGGATGAACAGAGGTGAATGGTaGGCTAGTCTCGAGGATGGCCTAATTCAGAGTTTC +
Preference number: 3 (lower is better)
Translates to: IMSPRGMNRGEW*ASLEDGLIQSF
Trigger: GAAACTCTGAATTAGGCCATCCTCGAGACTAGCCCACCATTCACCTCTGTTCATCCCCCGTGGGCTCATAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CAA 90 bp CTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTGTGGTGAAATGCCCTaGCATTTGTCTTCTAAGGTA +
Preference number: 3 (lower is better)
Translates to: LFLTVLAQVLKIWGKVGGCGEMP*HLSSKV
Trigger: TACCTTAGAAGACAAATGCAAGGGCATTTCACCACA...CCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR TCA 72 bp GGTGGGTATCTGGCCTCTTCTTTGGGACTCAAATTGTaGTATCTCTCTGAGAACCCACAGGCTCCCTCTTTA +
Preference number: 3 (lower is better)
Translates to: GGYLASSLGLKL*YLSENPQAPSL
Trigger: TAAAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCAGATACCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR CCA 72 bp GATCAGTCACTTACCAGCCATGTACGTGAAATTGCTTaGGAACCTGAACTCCCGCTGGAATTTCTACCTGGA +
Preference number: 3 (lower is better)
Translates to: DQSLTSHVREIA*EPELPLEFLPG
Trigger: TCCAGGTAGAAATTCCAGCGGGAGTTCAGGTTCCCAAGCAATTTCACGTACATGGCTGGTAAGTGACTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 72 bp AGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTaGCCTCTTCTTTGGGACTCAAATTGTGATATCTCT +
Preference number: 3 (lower is better)
Translates to: RCLRFGGRWVGI*PLLWDSNCDIS
Trigger: AGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR CCA 72 bp GGCCTAATTCAGAGTTTCCTAAGTGTCAGCCATTCATaGAACCACCCCTGTGATTTTTGCTACCTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: GLIQSFLSVSHS*NHPCDFCYLSG
Trigger: TCCAGAGAGGTAGCAAAAATCACAGGGGTGGTTCCATGAATGGCTGACACTTAGGAAACTCTGAATTAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CCA 72 bp GTGTGTGTGCGTGTGTGCGTGTGTATAGGCGGCGAGTaGGGGGCAATACAGAATTATTCATTCAAGTTATTT +
Preference number: 3 (lower is better)
Translates to: VCVRVCVCIGGE*GAIQNYSFKLF
Trigger: AAATAACTTGAATGAATAATTCTGTATTGCCCCCCACTCGCCGCCTATACACACGCACACACGCACACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CAA 90 bp GTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCGCTGATGCTCTATTTTaGTTATCCAACCTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: VSQMGTSKSILSSFKTPSADALF*LSNLLP
Trigger: GGGCAGGAGGTTGGATAACAAAAATAGAGCATCAGC...GCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CAA 90 bp CATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTGAAATGCCCTTGCATTaGTCTTCTAAGGTAGGAGGG +
Preference number: 3 (lower is better)
Translates to: HVSQMGTSKSILSSFKTPEMPLH*SSKVGG
Trigger: CCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTC...AGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CAA 90 bp TCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTGACACATCCAGGCATTaGGGCAAGAAACTTCTTCCA +
Preference number: 3 (lower is better)
Translates to: SQMGTSKSILSSFKTPSIDTSRH*GKKLLP
Trigger: TGGAAGAAGTTTCTTGCCCAAATGCCTGGATGTGTC...AATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507481.2
3UTR GCA 72 bp AATTATTCATTCAAATTACTTAAAGTACCTACTATGTaGTGGGTAGGCTTGGTGCTGGGCATTGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: NYSFKLLKVPTM*WVGLVLGIGWG
Trigger: CCCCCACCCAATGCCCAGCACCAAGCCTACCCAGCACATAGTAGGTACTTTAAGTAATTTGAATGAATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR-3UTR CAA 90 bp CTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTATGTGGTGAAATGCCCTaGCATTTGTCTTCTAAGGTA +
Preference number: 3 (lower is better)
Translates to: LSSFKTPSIQSTFTLPWVCGEMP*HLSSKV
Trigger: TACCTTAGAAGACAAATGCAAGGGCATTTCACCACA...TACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CAA 90 bp TACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTGCTTTCACATAAAATaGCAGTATGAACTGATGGAC +
Preference number: 3 (lower is better)
Translates to: YSPALRLLAFNLHLLSHGCFHIK*QYELMD
Trigger: GTCCATCAGTTCATACTGCAATTTTATGTGAAAGCA...CCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR-3UTR CAA 90 bp ATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGTGCTTTCACATAAAATaGCAGTATGAACTGATGGAC +
Preference number: 3 (lower is better)
Translates to: ILSSFKTPSIQSTFTLPWCFHIK*QYELMD
Trigger: GTCCATCAGTTCATACTGCAATTTTATGTGAAAGCA...CCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp AGAGCCACTCAGGGAGGGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCTGTGCAGGGCAGCCCTaGAAAGGAGGCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RATQGGLHLAFTTGRPVACAGQP*KGGREQ
Trigger: CTGCTCCCTGCCTCCTTTTCAGGGCTGCCCTGCACA...GGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCCTCCCTGAGTGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp GGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGCCCATTGTACTGCGCTTTaGTGTAGCCGCGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GCIWPSPQDAQWPDCEPAHCTAL*CSRGLQ
Trigger: CTGCAGCCCGCGGCTACAGCAAAGCGCAGTACAATG...GGCTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp GTCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGCCATCCATGGGACCTTaGACCCCCGCTCGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VRSQLQGDMARQVAEPDLPSMGP*TPARAW
Trigger: CCAGGCACGAGCGGGGGTCCAAGGTCCCATGGATGG...CAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp GTCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGCCTGGAAGTGGATCTaGCTTGCCAGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VRSQLQGDMARQVAEPDLAWKWI*LASCRA
Trigger: GGCCCTGCAGCTGGCAAGGCAGATCCACTTCCAGGC...CAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp GTCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGCCGCTGAGGTCCTGCTaGCAGGGATGCCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VRSQLQGDMARQVAEPDLPLRSC*QGCLEV
Trigger: CACTTCCAGGCATCCCTGCCAGCAGGACCTCAGCGG...CAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp GTCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGCTCGCAGCCTCTCCTaGGCGGCCTCATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VRSQLQGDMARQVAEPDLARSLS*AASFPR
Trigger: TCTGGGAAATGAGGCCGCCCAGGAGAGGCTGCGAGC...CAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GTCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGCCACAGGACGCCCAGTaGCCAGACTGTGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: VRSQLQGDMARQVAEPDLPQDAQ*PDCEPA
Trigger: GGCTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGG...CAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp GGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGGTGGAGGAGGTAGTCTaGGGCCCATCTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GQASGRARPGSSHTFLFLVEEVV*GPSGLV
Trigger: CACCAGCCCAGATGGGCCTCAGACTACCTCCTCCAC...CAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACAGTTCCGGGGCTGAGCTaGGGCTTCTTCCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTVPGLS*GFFLAK
Trigger: CTTGGCCAGGAAGAAGCCTCAGCTCAGCCCCGGAAC...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACAGCTTTCAGCTCCCCCTaGCCGTCTCCCTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTAFSSP*PSPWLF
Trigger: GAAGAGCCAGGGAGACGGGCAGGGGGAGCTGAAAGC...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp CTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGCTCGTGCCTGGGCCATaGGGACCTGACCTGTCGAGG +
Preference number: 4 (lower is better)
Translates to: LFLTVLAQVLKIWGKVGGLVPGP*GPDLSR
Trigger: CCTCGACAGGTCAGGTCCCCATGGCCCAGGCACGAG...CCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACTGGGCCATCGGGGCTaGGGAGGATGTGTTGTCGCA +
Preference number: 4 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTLGHRG*GGCVVA
Trigger: TGCGACAACACATCCTCCCCAGCCCCGATGGCCCAG...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGGCTGCAGCCCCCATaGAAAAGAGGGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLGLQPP*KRGLAA
Trigger: GGCTGCGAGCCCTCTTTTCCATGGGGGCTGCAGCCC...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGACATGGCCAGGCAAGTaGCAGAGCCAGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWTWPGK*QSQTWV
Trigger: GACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGT...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp TGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTACCTCCTGCCCGCTCTaGCCCCTAAGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: WRRCLRFGGRWVGIWPLLTSCPL*PLRGTR
Trigger: CCTGGTGCCTCTTAGGGGCCAGAGCGGGCAGGAGGT...AAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp AGAGCCACTCAGGGAGGGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCCAGTGCTGGGGACACTaGAATACAAAGACAAGGACC +
Preference number: 4 (lower is better)
Translates to: RATQGGLHLAFTTGRPVAQCWGH*NTKTRT
Trigger: GGTCCTTGTCTTTGTATTCCAGTGTCCCCAGCACTG...GGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCCTCCCTGAGTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACAAGGGAGGGCTGCATCTaGCCTTCACCACAGGACGCC +
Preference number: 4 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTREGCI*PSPQDA
Trigger: GGCGTCCTGTGGTGAAGGCCAGATGCAGCCCTCCCT...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGCTTGGGCTCCCCGGGTaGAAGAGAGGTGCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWLGLPG*KRGARK
Trigger: TTTCCTAGCACCTCTCTTTCACCCGGGGAGCCCAAG...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp GAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAAGGGTCCAACAGTGGTaGGCCAGTGTGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: EHHCLLGQSEHKGPLCGERVQQW*ASVQGS
Trigger: GCTGCCCTGCACACTGGCTCACCACTGTTGGACCCT...TTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACAGAAGTGGATCTGCCTTaGCAGCTGCAGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTEVDLP*QLQGQH
Trigger: GTGCTGGCCCTGCAGCTGGCAAGGCAGATCCACTTC...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGCGAGATGCCCACTTCTaGAGAGGAGGCCAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWRDAHF*RGGQGC
Trigger: GCAACCTTGGCCTCCTCTGCAGAAGTGGGCATCTCG...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp AACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTCTCGTGCCTGGGCCATaGGGACCTGACCTGTCGAGG +
Preference number: 4 (lower is better)
Translates to: NHEHHCLLGQSEHKGPLCLVPGP*GPDLSR
Trigger: CCTCGACAGGTCAGGTCCCCATGGCCCAGGCACGAG...ACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACAGGGCTGAGGCTGGGCTaGTTTTGCCTCGGACTCGAT +
Preference number: 4 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTGLRLG*FCLGLD
Trigger: ATCGAGTCCGAGGCAAAACCAGCCCAGCCTCAGCCC...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGATGGACAAGAACTCTaGGCCAGGAGTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWDGQEL*ARSQEA
Trigger: GGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATC...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCGATGGACAAGAACTCTaGGCCAGGAGTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GDMARQVAEPDLGLHTLSDGQEL*ARSQEA
Trigger: GGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATC...GGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACCATCCCCCTGGGGCTaGATCAAGACCGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTPSPWG*IKTAVT
Trigger: AGTCACTGCGGTCTTGATCCAGCCCCAGGGGGATGG...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp CAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGAGTGGAGGAGGTAGTCTaGGGCCCATCTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QVLKIWGKVGGYLASSLGVEEVV*GPSGLV
Trigger: CACCAGCCCAGATGGGCCTCAGACTACCTCCTCCAC...TCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp TATGAACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCAGGTCCTCAGAGAAGTTCCGGGGCTaGGCTGAGGCTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: YELMDKNSGPGVRRPRSSEKFRG*AEASSW
Trigger: CCAGGAAGAAGCCTCAGCTCAGCCCCGGAACTTCTC...TGAGGACCTGGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp CCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGACGAGAAGTTCCGGGGCTaGGCTGAGGCTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGKWQSQTWVFTHFPLLDEKFRG*AEASSW
Trigger: CCAGGAAGAAGCCTCAGCTCAGCCCCGGAACTTCTC...GTCAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp ACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCGGTCCAGGGGACTGTaGCAGGAGCAGTGTTCTACC +
Preference number: 4 (lower is better)
Translates to: TWPGKWQSQTWVFTHFPLRSRGL*QEQCST
Trigger: GGTAGAACACTGCTCCTGGCACAGTCCCCTGGACCG...AAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGCCCTGGGGGTGCCTCTaGCATGCTCATGACACAAGC +
Preference number: 4 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLPWGCL*HAHDTS
Trigger: GCTTGTGTCATGAGCATGGCAGAGGCACCCCCAGGG...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp CTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTCAGCAAGGACACTaGCCTCTGCCGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LQGDMARQVAEPDLGLHTLQQGH*PLPLRV
Trigger: AACCCTGAGCGGCAGAGGGCAGTGTCCTTGCTGAAG...TGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp CATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTAGGCTGGCTCCGAGATaGCCACTTCTGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HEHHCLLGQSEHKGPLCGRLAPR*PLLQRR
Trigger: CCTCCTCTGCAGAAGTGGGCATCTCGGAGCCAGCCT...ACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp ACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTGCATCCTTCCATCCATaGGACCTTGGACCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: TWPGKWQSQTWVFTHFPLASFHP*DLGPPL
Trigger: GAGCGGGGGTCCAAGGTCCCATGGATGGAAGGATGC...AAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp ACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTTGGAGGCTTCCAGGCTaGCTCCGAGATGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: TWPGKWQSQTWVFTHFPLWRLPG*LRDAHF
Trigger: GAAGTGGGCATCTCGGAGCCAGCCTGGAAGCCTCCA...AAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp TGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGAGGCTTCCAGGCTaGCTCCGAGATGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: WRRCLRFGGRWVGIWPLLWRLPG*LRDAHF
Trigger: GAAGTGGGCATCTCGGAGCCAGCCTGGAAGCCTCCA...AAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp CATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGGTAGGGCTCCTTGGTaGAAAGCACCCCGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: HEHHCLLGQSEHKGPLCGGRAPW*KAPRGK
Trigger: CTTTCCTCGGGGTGCTTTTCACCAAGGAGCCCTACC...ACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp GAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAGGTAGGGCTCCTTGGTaGAAAGCACCCCGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: EHHCLLGQSEHKGPLCGEGRAPW*KAPRGK
Trigger: CTTTCCTCGGGGTGCTTTTCACCAAGGAGCCCTACC...TTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp CTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGGTCACAGCTTCAAGGTaGCATGGCCAGGCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LFLTVLAQVLKIWGKVGGVTASR*HGQASG
Trigger: GCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGAC...CCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp TATGAACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCAGGTCCTCACGAGATGCCCACTTCTaGAGAGGAGGCCAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: YELMDKNSGPGVRRPRSSRDAHF*RGGQGC
Trigger: GCAACCTTGGCCTCCTCTGCAGAAGTGGGCATCTCG...TGAGGACCTGGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp AGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGACAGGCTGGCTCCGAGATaGCCACTTCTGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RCLRFGGRWVGIWPLLWDRLAPR*PLLQRR
Trigger: CCTCCTCTGCAGAAGTGGGCATCTCGGAGCCAGCCT...GTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTCGTAGTAGGCACCTaGCATAGCGGTACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LQGDMARQVAEPDLGLHTLVVGT*HSGTEP
Trigger: TGGCTCAGTACCGCTATGCCAGGTGCCTACTACGAG...TGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGACCCCGAGGAAAGCTTaGGCCTCTCTCAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LFLTVLAQVLKIWGKVGGTPRKA*ASLKPE
Trigger: CTCAGGCTTGAGAGAGGCCCAAGCTTTCCTCGGGGT...CCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GGTGAAATGCCCTTGCATTTGTCTTCTAAGGTAGGAGGGCAGACACCATTGCCTGGGCTGCAGCCCCCATaGAAAAGAGGGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GEMPLHLSSKVGGQTPLPGLQPP*KRGLAA
Trigger: GGCTGCGAGCCCTCTTTTCCATGGGGGCTGCAGCCC...AGGCAATGGTGTCTGCCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACATGCAGAGGGAGGGGCTaGAGAAAGACTTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LQGDMARQVAEPDLGLHTCRGRG*RKTSVL
Trigger: CAGGACTGAAGTCTTTCTCCAGCCCCTCCCTCTGCA...TGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCAACACTCCTTTCCAGTaGGTAGGGGTGTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GDMARQVAEPDLGLHTLSNTPFQ*VGVWGN
Trigger: ATTCCCCCACACCCCTACCCACTGGAAAGGAGTGTT...GGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGAACACTCCTTTCCAGTaGGTAGGGGTGTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWNTPFQ*VGVWGN
Trigger: ATTCCCCCACACCCCTACCCACTGGAAAGGAGTGTT...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GAGCTTCCCACAAAGGTCTCATTGGTGAGGGCGCCGGGCTTTAACCCAGCATCCAGGTGGGTGGGTATCTaGCCTCTTCTTTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: ELPTKVSLVRAPGFNPASRWVGI*PLLWDS
Trigger: TGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCT...GGATGCTGGGTTAAAGCCCGGCGCCCTCACCAATGAGACCTTTGTGGGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp CAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGAGTGGTACCTGCTCTGTaGGTCCCCATTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVLKIWGKVGGYLASSLGVVPAL*VPIVGC
Trigger: GCAGCCAACAATGGGGACTCACAGAGCAGGTACCAC...TCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACAACACTTTCCTCTTCTTaGCTGTACTGGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTTLSSS*LYWRRC
Trigger: GCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGT...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp GTCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGAGGTCCTCTCTGTGGTaGAATGCCCTTGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: VRSQLQGDMARQVAEPDLRSSLW*NALAFV
Trigger: GACAAATGCAAGGGCATTTCACCACAGAGAGGACCT...CAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp GGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGCCCCTGGAAAGGGTTGCTaGTGCTCTATTTTTGTTATC +
Preference number: 4 (lower is better)
Translates to: GCIWPSPQDAQWPDCEPAPGKGC*CSIFVI
Trigger: GATAACAAAAATAGAGCATCAGCAACCCTTTCCAGG...GGCTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp GGTATCTGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACCCAGTGGCCAGACTGTaGACCAGCCCTCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GIWPLLWDSNCDISLRTHPVARL*TSPRPQ
Trigger: CTGGGGCCGAGGGCTGGTTCACAGTCTGGCCACTGG...GTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCAGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp AACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTCTTCAGCAAGGACACTaGCCTCTGCCGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: NHEHHCLLGQSEHKGPLCLQQGH*PLPLRV
Trigger: AACCCTGAGCGGCAGAGGGCAGTGTCCTTGCTGAAG...ACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAACTTCAGCAAGGACACTaGCCTCTGCCGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SITASWAKVSTKVLSVVKLQQGH*PLPLRV
Trigger: AACCCTGAGCGGCAGAGGGCAGTGTCCTTGCTGAAG...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp AAGTCATGCAACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTAGGCTGGCTCCGAGATaGCCACTTCTGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KSCNHEHHCLLGQSEHKGRLAPR*PLLQRR
Trigger: CCTCCTCTGCAGAAGTGGGCATCTCGGAGCCAGCCT...ACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTTGCATGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp GGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGCTGTACTGGCGCAGGTaGTTAAGATTTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQASGRARPGSSHTFLFLLYWRR*LRFGGR
Trigger: CCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAG...CAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp GGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGAACCATGAGCATCACTaGCTCCTGGGCCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: GQASGRARPGSSHTFLFLNHEHH*LLGQSE
Trigger: CTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTT...CAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp TGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTAGTCTGAGGCCCATCTaGGCTGGTGGACTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: WRRCLRFGGRWVGIWPLLSLRPI*AGGLRS
Trigger: ACTCCTAAGTCCACCAGCCCAGATGGGCCTCAGACT...AAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp GGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGGAGTGCCCCAAGATATaGCATCCCATAGGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: GQASGRARPGSSHTFLFLECPKI*HPIGCS
Trigger: CGAACACCCTATGGGATGCCATATCTTGGGGCACTC...CAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp CTCCCTCTCGTCCTCTCACACTTCCTCTGGGGCACTGATGATGAGTCATTAATACCGCTGAGGTCCTGCTaGCAGGGATGCCTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LPLVLSHFLWGTDDESLIPLRSC*QGCLEV
Trigger: CACTTCCAGGCATCCCTGCCAGCAGGACCTCAGCGG...TATTAATGACTCATCATCAGTGCCCCAGAGGAAGTGTGAGAGGACGAGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp TGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTGTTCCTTTTCACCAGTaGGCTGAGGCTGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: WRRCLRFGGRWVGIWPLLVPFHQ*AEAGLV
Trigger: AACCAGCCCAGCCTCAGCCCACTGGTGAAAAGGAAC...AAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp CATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTCTCGTAGTAGGCACCTaGCATAGCGGTACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: HEHHCLLGQSEHKGPLCGLVVGT*HSGTEP
Trigger: TGGCTCAGTACCGCTATGCCAGGTGCCTACTACGAG...ACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGAGGTGGGTGGGTATCTaGCCTCTTCTTTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: GQASGRARPGSSHTFLFLRWVGI*PLLWDS
Trigger: TGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCT...CAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTAGCTTCAAGGTGACATaGCCAGGCAAGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HEHHCLLGQSEHKGPLCGSFKVT*PGKWQS
Trigger: GCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT...ACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GAGCTTCCCACAAAGGTCTCATTGGTGAGGGCGCCGGGCTTTAACCCAGCATCCCCTACCCCCAACCTTTaGCACCCCAAATTGAATCAG +
Preference number: 4 (lower is better)
Translates to: ELPTKVSLVRAPGFNPASPTPNL*HPKLNQ
Trigger: CTGATTCAATTTGGGGTGCCAAAGGTTGGGGGTAGG...GGATGCTGGGTTAAAGCCCGGCGCCCTCACCAATGAGACCTTTGTGGGAAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGTACCTACTATGTGCTaGGTAGGCTTGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLVPTMC*VGLVLG
Trigger: GCCCAGCACCAAGCCTACCCAGCACATAGTAGGTAC...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp AAGTCATGCAACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTGTGCCACAAGGGAGATaGGAAGAAACGGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KSCNHEHHCLLGQSEHKGVPQGR*EETVQG
Trigger: CCCCTGGACCGTTTCTTCTCATCTCCCTTGTGGCAC...ACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTTGCATGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp TATGAACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCAGGTCCTCATCTCAAAGAGTTGTGTaGGAAGTTCCGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: YELMDKNSGPGVRRPRSSSQRVV*EVPGLS
Trigger: GCTCAGCCCCGGAACTTCTCACACAACTCTTTGAGA...TGAGGACCTGGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp AAATTGCAGTATGAACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCTCCTCAGAGGGGTCCTaGGGACGAGCTCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: KLQYELMDKNSGPGVRRPSSEGS*GRAPLK
Trigger: TTTGAGAGGAGCTCGTCCTCAGGACCCCTCTGAGGA...GGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATACTGCAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAACCTCTGCCATGCTCATaGCACAAGCCCGCATTGTAC +
Preference number: 4 (lower is better)
Translates to: SITASWAKVSTKVLSVVKPLPCS*HKPALY
Trigger: GTACAATGCGGGCTTGTGTCATGAGCATGGCAGAGG...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp GTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCACCCAGCTCTGCCAGTaGAGCCCATCCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VSQMGTSKSILSSFKTPSTQLCQ*SPSPWG
Trigger: GCCCCAGGGGGATGGGCTTCACTGGCAGAGCTGGGT...GCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp TGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCGCCTGGAAGTGGATCTaGCTTGCCAGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WPLLWDSNCDISLRTHRLAWKWI*LASCRA
Trigger: GGCCCTGCAGCTGGCAAGGCAGATCCACTTCCAGGC...GAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp AACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGCTGTAGCCGCGGGCTaGAGCTTTCTGGAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: NHEHHCLLGQSEHKGPLCAVAAG*SFLEVR
Trigger: TCTTACTTCCAGAAAGCTGCAGCCCGCGGCTACAGC...ACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp AAGTCATGCAACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTAAGGACACTGCCCTCTaGCGCTCAGGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: KSCNHEHHCLLGQSEHKGKDTAL*RSGFHE
Trigger: TTCGTGGAACCCTGAGCGGCAGAGGGCAGTGTCCTT...ACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTTGCATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp GGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGTTCCAAGGTGGTACCTaGTCTGTGAGTCCCCATTGT +
Preference number: 4 (lower is better)
Translates to: GQASGRARPGSSHTFLFLFQGGT*SVSPHC
Trigger: ACAATGGGGACTCACAGAGCAGGTACCACCTTGGAA...CAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp CTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGACTCAAAGGCCAAGGTTGCCTGTaGTCGAGGCATGTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LKIWGKVGGYLASSLGLKGQGCL*SRHVVG
Trigger: GCCTACCACATGCCTCGAGCACAGGCAACCTTGGCC...TTTGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp AAGTCATGCAACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCGAGATGCCCACTTCTaGAGAGGAGGCCAAGGTTGC +
Preference number: 4 (lower is better)
Translates to: KSCNHEHHCLLGQSEHKGRDAHF*RGGQGC
Trigger: GCAACCTTGGCCTCCTCTGCAGAAGTGGGCATCTCG...ACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTTGCATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp TGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTCTGTACTGGCGCAGGTaGTTAAGATTTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WRRCLRFGGRWVGIWPLLLYWRR*LRFGGR
Trigger: CCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAG...AAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp CATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTAACCATGAGCATCACTaGCTCCTGGGCCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: HEHHCLLGQSEHKGPLCGNHEHH*LLGQSE
Trigger: CTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTT...ACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp CCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGACATTTCACGCAGAGGGTaGCCCAGGAAGGCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: PGKWQSQTWVFTHFPLLDISRRG*PRKAQK
Trigger: CTTTTGAGCCTTCCTGGGGCACCCTCTGCGTGAAAT...GTCAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp ACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCAGTGTGCCTGGGAGCTaGGCCATCGGGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TFLAHVSQMGTSKSILSSSVPGS*AIGAGE
Trigger: CTCCCCAGCCCCGATGGCCCAGCTCCCAGGCACACT...GCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGAAAAGGCTGCCGTGTaGTCGCCACTCTTCATGTTC +
Preference number: 4 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLEKAAV*SPLFMF
Trigger: GAACATGAAGAGTGGCGACCACACGGCAGCCTTTTC...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp CTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGGGCTGTGGCCCTGGCTaGCAGCCAACTGATAATAAA +
Preference number: 4 (lower is better)
Translates to: LFLTVLAQVLKIWGKVGGGCGPG*QPTDNK
Trigger: TTTATTATCAGTTGGCTGCCAGCCAGGGCCACAGCC...CCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAATGCAGAGGGAGGGGCTaGAGAAAGACTTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SITASWAKVSTKVLSVVKCRGRG*RKTSVL
Trigger: CAGGACTGAAGTCTTTCTCCAGCCCCTCCCTCTGCA...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp AGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGACAGCTTCAAGGTGACATaGCCAGGCAAGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RCLRFGGRWVGIWPLLWDSFKVT*PGKWQS
Trigger: GCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT...GTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGCTGGAATTTCTACCTaGAAAGGGTTGCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWAGIST*KGLLML
Trigger: GAGCATCAGCAACCCTTTCCAGGTAGAAATTCCAGC...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp GGTGAAATGCCCTTGCATTTGTCTTCTAAGGTAGGAGGGCAGACACCATTGCCTGAGCTAGAGGACGCTTaGGCTCCCCGGGTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GEMPLHLSSKVGGQTPLPELEDA*APRVKE
Trigger: CTCTTTCACCCGGGGAGCCCAAGCGTCCTCTAGCTC...AGGCAATGGTGTCTGCCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp CAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGACCTCGGCCCCAGCTATaGCTAGAAGGAAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: QVLKIWGKVGGYLASSLGPRPQL*LEGSSQ
Trigger: CTGACTACTTCCTTCTAGCCATAGCTGGGGCCGAGG...TCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp GCCTTTGGTCTACAACTGAGGAAACAATATAGGGAGTCAGGTCACAGCTTCAAGGTTCCGGGGCTGAGCTaGGGCTTCTTCCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: AFGLQLRKQYRESGHSFKVPGLS*GFFLAK
Trigger: CTTGGCCAGGAAGAAGCCTCAGCTCAGCCCCGGAAC...CTTGAAGCTGTGACCTGACTCCCTATATTGTTTCCTCAGTTGTAGACCAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp GGTGAAATGCCCTTGCATTTGTCTTCTAAGGTAGGAGGGCAGACACCATTGCCTGTGGTACCTGCTCTGTaGGTCCCCATTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GEMPLHLSSKVGGQTPLPVVPAL*VPIVGC
Trigger: GCAGCCAACAATGGGGACTCACAGAGCAGGTACCAC...AGGCAATGGTGTCTGCCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp GAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAAGGTCCTCTCTGTGGTaGAATGCCCTTGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: EHHCLLGQSEHKGPLCGERSSLW*NALAFV
Trigger: GACAAATGCAAGGGCATTTCACCACAGAGAGGACCT...TTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp CACACTTTCCTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGCCTCCTGGGCCAAAGTaGGCACAAAGGTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HTFLFLTVLAQVLKIWGKPPGPK*AQRSSL
Trigger: CAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGG...CTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp GGTATCTGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACGGCGCCACATGTCGCTaGCAGCACCACAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GIWPLLWDSNCDISLRTHGATCR*QHHREL
Trigger: GAGCTCTCTGTGGTGCTGGCAGCGACATGTGGCGCC...GTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCAGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp CATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTTTGGACCCCCGCTCGTaGCTGGGCCATGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: HVSQMGTSKSILSSFKTPLDPRS*LGHGDL
Trigger: CAGGTCCCCATGGCCCAGGCACGAGCGGGGGTCCAA...AGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp GGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGATGCTACTACTGGCATaGAGGAAGCCAAAATCACCG +
Preference number: 4 (lower is better)
Translates to: GQASGRARPGSSHTFLFLMLLLA*RKPKSP
Trigger: CGGTGATTTTGGCTTCCTGCATGCCAGTAGTAGCAT...CAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp TTTTGGTCCCTTGACAACACCTTTCTCACGACTCTGCCATCCTTCCCTTTCCACCCTGAGTCTGCAGCCTaGTTCAGCAAGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: FWSLDNTFLTTLPSFPFHPESAA*FSKDTA
Trigger: GGCAGTGTCCTTGCTGAAGCAGGCTGCAGACTCAGG...GTGGAAAGGGAAGGATGGCAGAGTCGTGAGAAAGGTGTTGTCAAGGGACCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp CTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGACTCAAACCTGAGTCTGCAGCCTaGTTCAGCAAGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: LKIWGKVGGYLASSLGLKPESAA*FSKDTA
Trigger: GGCAGTGTCCTTGCTGAAGCAGGCTGCAGACTCAGG...TTTGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp TGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTTCCAAGGTGGTACCTaGTCTGTGAGTCCCCATTGT +
Preference number: 4 (lower is better)
Translates to: WRRCLRFGGRWVGIWPLLFQGGT*SVSPHC
Trigger: ACAATGGGGACTCACAGAGCAGGTACCACCTTGGAA...AAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp CTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGGAGGGCAGACACCATTaGCTTTGGTCTACAACTGAG +
Preference number: 4 (lower is better)
Translates to: LFLTVLAQVLKIWGKVGGEGRHH*LWSTTE
Trigger: CTCAGTTGTAGACCAAAGGCAATGGTGTCTGCCCTC...CCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp TTTTGGTCCCTTGACAACACCTTTCTCACGACTCTGCCATCCTTCCCTTTCCACAGTGGTGAGCCAGTGTaGAGGGCAGCCCTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: FWSLDNTFLTTLPSFPFHSGEPV*RAALKR
Trigger: CCTTTTCAGGGCTGCCCTGCACACTGGCTCACCACT...GTGGAAAGGGAAGGATGGCAGAGTCGTGAGAAAGGTGTTGTCAAGGGACCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAAGAGTGCCCCAAGATATaGCATCCCATAGGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: SITASWAKVSTKVLSVVKECPKI*HPIGCS
Trigger: CGAACACCCTATGGGATGCCATATCTTGGGGCACTC...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp TGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCGGGCTGAGGCTGGGCTaGTTTTGCCTCGGACTCGAT +
Preference number: 4 (lower is better)
Translates to: WPLLWDSNCDISLRTHRLGLRLG*FCLGLD
Trigger: ATCGAGTCCGAGGCAAAACCAGCCCAGCCTCAGCCC...GAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp CTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCCTCTTGCTCGCAGCCTCTCCTaGGCGGCCTCATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLWDSNCDISLRTHRLPLARSLS*AASFPR
Trigger: TCTGGGAAATGAGGCCGCCCAGGAGAGGCTGCGAGC...AAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp AACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTTTGGGGGAAGGTGGGTaGGTATCTGGCCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: NHEHHCLLGQSEHKGPLCLGEGG*VSGLFF
Trigger: AAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAA...ACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGAAGCATCACTGCCTCCTaGGCCAAAGTGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: QVLKIWGKVGGYLASSLGSITAS*AKVSTK
Trigger: CTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT...TCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACAAACCTGAACTCCCGCTaGAATTTCTACCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTNLNSR*NFYLER
Trigger: CCTTTCCAGGTAGAAATTCCAGCGGGAGTTCAGGTT...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp CCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGACTTGAATTGGCCAGGCTaGTTGGTCTCCACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: PGKWQSQTWVFTHFPLLDLNWPG*LVSTQS
Trigger: TGACTGAGTGGAGACCAACCAGCCTGGCCAATTCAA...GTCAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp CTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTTCTTGCCTTTGAATTaGCCAGGCTGGTTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LFLTVLAQVLKIWGKVGGFLPLN*PGWLVS
Trigger: GGAGACCAACCAGCCTGGCCAATTCAAAGGCAAGAA...CCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp ATGAACAGAGGTGAATGGTGGGCTAGTCTCGAGGATGGCCTAATTCAGAGTTTCTCCTCAGAGGGGTCCTaGGGACGAGCTCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: MNRGEWWASLEDGLIQSFSSEGS*GRAPLK
Trigger: TTTGAGAGGAGCTCGTCCTCAGGACCCCTCTGAGGA...GAAACTCTGAATTAGGCCATCCTCGAGACTAGCCCACCATTCACCTCTGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp TCTTCCAGCCATGTACGTGAAATTGCTTGGGAACCTGAACTCCCGCTGGAATTTGTCACAGCTTCAAGGTaGCATGGCCAGGCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSHVREIAWEPELPLEFVTASR*HGQASG
Trigger: GCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGAC...AAATTCCAGCGGGAGTTCAGGTTCCCAAGCAATTTCACGTACATGGCTGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507481.2
CDS-3UTR TCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGAATTGCTTGGGAACCTaGACTCCCGCTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLNCLGT*TPAGIS
Trigger: AGAAATTCCAGCGGGAGTTCAGGTTCCCAAGCAATT...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAACAAGACCGCAGTGACTaGACAGCCAAGGATTTTTGG +
Preference number: 4 (lower is better)
Translates to: SITASWAKVSTKVLSVVKQDRSD*TAKDFW
Trigger: CCAAAAATCCTTGGCTGTTCAGTCACTGCGGTCTTG...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp CAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGAGAAGTAAGAAAAGGCTaGCGTGTGGTCGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: QVLKIWGKVGGYLASSLGEVRKG*RVVATL
Trigger: AAGAGTGGCGACCACACGGCAGCCTTTTCTTACTTC...TCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp TGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCAGAGGAGGCCAAGGTTaGCTGTGCTCGAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: WPLLWDSNCDISLRTHRLRGGQG*LCSRHV
Trigger: CACATGCCTCGAGCACAGGCAACCTTGGCCTCCTCT...GAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp ATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGAGTGTGCCTGGGAGCTaGGCCATCGGGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ILSSFKTPSIQSTFTLPWSVPGS*AIGAGE
Trigger: CTCCCCAGCCCCGATGGCCCAGCTCCCAGGCACACT...CCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp GGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGACTCGATGCTACTACTaGCATGCAGGAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: GQASGRARPGSSHTFLFLTRCYY*HAGSQN
Trigger: ATTTTGGCTTCCTGCATGCCAGTAGTAGCATCGAGT...CAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp AGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACAACTCGATGCTACTACTaGCATGCAGGAAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SFKVTWPGKWQSQTWVFTTRCYY*HAGSQN
Trigger: ATTTTGGCTTCCTGCATGCCAGTAGTAGCATCGAGT...TGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp CCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCCTACCCCGAGGAAAGCTTaGGCCTCTCTCAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PLLWDSNCDISLRTHRLPTPRKA*ASLKPE
Trigger: CTCAGGCTTGAGAGAGGCCCAAGCTTTCCTCGGGGT...AGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCCTCTTTGGAGGCTTCCAGGCTaGCTCCGAGATGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: LLWDSNCDISLRTHRLPLWRLPG*LRDAHF
Trigger: GAAGTGGGCATCTCGGAGCCAGCCTGGAAGCCTCCA...AAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCCTCTTACATGGCCAGGCAAGTaGCAGAGCCAGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LLWDSNCDISLRTHRLPLTWPGK*QSQTWV
Trigger: GACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGT...AAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGAGACACCATTGCCTTTaGTCTACAACTGAGGAAACA +
Preference number: 4 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWRHHCL*STTEET
Trigger: TGTTTCCTCAGTTGTAGACCAAAGGCAATGGTGTCT...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GTCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGTTTTTGCTACCTCTCTaGATCTGTGCCCACTTTTAC +
Preference number: 4 (lower is better)
Translates to: VRSQLQGDMARQVAEPDLFLLPL*ICAHFY
Trigger: GTAAAAGTGGGCACAGATCCAGAGAGGTAGCAAAAA...CAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp GGTGAAATGCCCTTGCATTTGTCTTCTAAGGTAGGAGGGCAGACACCATTGCCTTCAGTAGTGACTGAGTaGGAGGGAGAGCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: GEMPLHLSSKVGGQTPLPSVVTE*EGEPLR
Trigger: CCTGAGTGGCTCTCCCTCCCACTCAGTCACTACTGA...AGGCAATGGTGTCTGCCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp AAGTCATGCAACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTAAGCGATGGAAACACTaGGCTGGAAGAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KSCNHEHHCLLGQSEHKGKRWKH*AGRAAE
Trigger: TTCAGCAGCTCTTCCAGCTCAGTGTTTCCATCGCTT...ACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTTGCATGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp GGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTAAAATCTTCTTGTaGACCAGGGATACACACATC +
Preference number: 4 (lower is better)
Translates to: GDMARQVAEPDLGLHTLSSKIFL*TRDTHI
Trigger: GATGTGTGTATCCCTGGTTCACAAGAAGATTTTAGA...GGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp GTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCTTTAACCCAGCATCCTaGCCCAGGCTGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VSQMGTSKSILSSFKTPSFNPAS*PRLALL
Trigger: CAGCAGGGCCAGCCTGGGTCAGGATGCTGGGTTAAA...GCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp TGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGAATCTGCCTTGCCAGCTaGAGGGCCAGCACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: WHMFPKWGPQNLYSPALRICLAS*RASTAR
Trigger: TCTGGCCGTGCTGGCCCTGCAGCTGGCAAGGCAGAT...TCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp CTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCCTCTTTCCTGCTGGCAGGGATaGCTGGAAGTGGATCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLWDSNCDISLRTHRLPLSCWQG*LEVDLP
Trigger: AGGCAGATCCACTTCCAGGCATCCCTGCCAGCAGGA...AAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp CTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGGCTGGCAGGGATGCCTaGAAGTGGATCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LAHVSQMGTSKSILSSFKAGRDA*KWICLA
Trigger: GGCAAGGCAGATCCACTTCCAGGCATCCCTGCCAGC...CTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp TACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGCTGGGCCATCGGGGCTaGGGAGGATGTGTTGTCGCA +
Preference number: 4 (lower is better)
Translates to: YSPALRLLAFNLHLLSHGLGHRG*GGCVVA
Trigger: TGCGACAACACATCCTCCCCAGCCCCGATGGCCCAG...CCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp ACTTTCCTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGAAAAGGCTGCCGTGTaGTCGCCACTCTTCATGTTC +
Preference number: 4 (lower is better)
Translates to: TFLFLTVLAQVLKIWGKVEKAAV*SPLFMF
Trigger: GAACATGAAGAGTGGCGACCACACGGCAGCCTTTTC...CACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp CTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGACTCAAAGGCTGTGGCCCTGGCTaGCAGCCAACTGATAATAAA +
Preference number: 4 (lower is better)
Translates to: LKIWGKVGGYLASSLGLKGCGPG*QPTDNK
Trigger: TTTATTATCAGTTGGCTGCCAGCCAGGGCCACAGCC...TTTGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGTGAGTCCCCATTGTTaGCTGCAAGCCAAAGATATT +
Preference number: 4 (lower is better)
Translates to: HEHHCLLGQSEHKGPLCGVSPHC*LQAKDI
Trigger: AATATCTTTGGCTTGCAGCCAACAATGGGGACTCAC...ACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp TACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGGCTCGCAGCCTCTCCTaGGCGGCCTCATTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: YSPALRLLAFNLHLLSHGARSLS*AASFPR
Trigger: TCTGGGAAATGAGGCCGCCCAGGAGAGGCTGCGAGC...CCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCATCTGGCCTCTTCTTTaGGACTCAAATTGTGATATC +
Preference number: 4 (lower is better)
Translates to: GDMARQVAEPDLGLHTLSIWPLL*DSNCDI
Trigger: GATATCACAATTTGAGTCCCAAAGAAGAGGCCAGAT...GGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp ACTTTCCTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGTTGGGGGAAGGTGGGTaGGTATCTGGCCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TFLFLTVLAQVLKIWGKVLGEGG*VSGLFF
Trigger: AAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAA...CACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
3UTR CAA 72 bp ACCGCAGTGACTGAACAGCCAAGGATTTTTGGTCCCTaGACAACACCTTTCTCACGACTCTGCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: TAVTEQPRIFGP*TTPFSRLCHPS
Trigger: GGAAGGATGGCAGAGTCGTGAGAAAGGTGTTGTCAAGGGACCAAAAATCCTTGGCTGTTCAGTCACTGCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp TTTCATAGGTCACTGAATGCATCCTTTGGTGCACAGACCAGAAATGACTGTGAACAGTGTTCTACCCGCTaGGGTCCTGCTGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: FHRSLNASFGAQTRNDCEQCSTR*GPAGRD
Trigger: ATCCCTGCCAGCAGGACCTCAGCGGGTAGAACACTG...TTCACAGTCATTTCTGGTCTGTGCACCAAAGGATGCATTCAGTGACCTATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp CCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCGTGGTACCTGCTCTGTaGGTCCCCATTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PKWGPQNLYSPALRLLAFVVPAL*VPIVGC
Trigger: GCAGCCAACAATGGGGACTCACAGAGCAGGTACCAC...GAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp GGTGAAATGCCCTTGCATTTGTCTTCTAAGGTAGGAGGGCAGACACCATTGCCTATTTCCCAGAGCGGCTaGCTGCTGGTAACATCTCAA +
Preference number: 4 (lower is better)
Translates to: GEMPLHLSSKVGGQTPLPISQSG*LLVTSQ
Trigger: TTGAGATGTTACCAGCAGTCAGCCGCTCTGGGAAAT...AGGCAATGGTGTCTGCCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp CATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTCCTTTGGTCTACAACTaGGGAAACAATATAGGGAGT +
Preference number: 4 (lower is better)
Translates to: HEHHCLLGQSEHKGPLCGPLVYN*GNNIGS
Trigger: ACTCCCTATATTGTTTCCTCAGTTGTAGACCAAAGG...ACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp CACACTTTCCTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGAGGTCCTCTCTGTGGTaGAATGCCCTTGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: HTFLFLTVLAQVLKIWGKRSSLW*NALAFV
Trigger: GACAAATGCAAGGGCATTTCACCACAGAGAGGACCT...CTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp ACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCCCTCCTGGGCCAAAGTaGGCACAAAGGTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TFLAHVSQMGTSKSILSSPPGPK*AQRSSL
Trigger: CAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGG...GCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp CTGAATGCATCCTTTGGTGCACAGACCAGAAATGACTGTGAATGCATCCAAGACAGACAAAGGCTAAGGTaGGCACCAGGGTCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LNASFGAQTRNDCECIQDRQRLR*APGSLD
Trigger: GTCCAGAGACCCTGGTGCTCACCTTAGCCTTTGTCT...GTCTTGGATGCATTCACAGTCATTTCTGGTCTGTGCACCAAAGGATGCATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp GCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTAGGGAGGGCACACGGTaGCATTTCACGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: AHVSQMGTSKSILSSFKTREGTR*HFTQRV
Trigger: CACCCTCTGCGTGAAATGTCACCGTGTGCCCTCCCT...AGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp ATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGGCGCCACATGTCGCTaGCAGCACCACAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: ILSSFKTPSIQSTFTLPWGATCR*QHHREL
Trigger: GAGCTCTCTGTGGTGCTGGCAGCGACATGTGGCGCC...CCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp TTTCATAGGTCACTGAATGCATCCTTTGGTGCACAGACCAGAAATGACTGTGAAGAAGTGGATCTGCCTTaGCAGCTGCAGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: FHRSLNASFGAQTRNDCEEVDLP*QLQGQH
Trigger: GTGCTGGCCCTGCAGCTGGCAAGGCAGATCCACTTC...TTCACAGTCATTTCTGGTCTGTGCACCAAAGGATGCATTCAGTGACCTATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp TACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGCGGTCCAGGGGACTGTaGCAGGAGCAGTGTTCTACC +
Preference number: 4 (lower is better)
Translates to: YSPALRLLAFNLHLLSHGRSRGL*QEQCST
Trigger: GGTAGAACACTGCTCCTGGCACAGTCCCCTGGACCG...CCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp GATGTGTATTGTGAATCTATAAAAAGGGGACGTCTGGTGCAGCATTTCCCAAACCCCTGGGGGTGCCTCTaGCATGCTCATGACACAAGC +
Preference number: 4 (lower is better)
Translates to: DVYCESIKRGRLVQHFPNPWGCL*HAHDTS
Trigger: GCTTGTGTCATGAGCATGGCAGAGGCACCCCCAGGG...GTTTGGGAAATGCTGCACCAGACGTCCCCTTTTTATAGATTCACAATACACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp ACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCAAGGACACTGCCCTCTaGCGCTCAGGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: TFLAHVSQMGTSKSILSSKDTAL*RSGFHE
Trigger: TTCGTGGAACCCTGAGCGGCAGAGGGCAGTGTCCTT...GCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp CTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGAAGGACACTGCCCTCTaGCGCTCAGGGTTCCACGAA +
Preference number: 4 (lower is better)
Translates to: LAHVSQMGTSKSILSSFKKDTAL*RSGFHE
Trigger: TTCGTGGAACCCTGAGCGGCAGAGGGCAGTGTCCTT...CTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp ATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTGGCCAAGGTTGCCTGTaGTCGAGGCATGTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: ISGTCFPNGDLKIYTLQLGQGCL*SRHVVG
Trigger: GCCTACCACATGCCTCGAGCACAGGCAACCTTGGCC...AAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp TGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCTGTACTGGCGCAGGTaGTTAAGATTTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WPLLWDSNCDISLRTHRLLYWRR*LRFGGR
Trigger: CCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAG...GAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp ACTTTCCTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGAGGGCAGACACCATTaGCTTTGGTCTACAACTGAG +
Preference number: 4 (lower is better)
Translates to: TFLFLTVLAQVLKIWGKVEGRHH*LWSTTE
Trigger: CTCAGTTGTAGACCAAAGGCAATGGTGTCTGCCCTC...CACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp CTGAATGCATCCTTTGGTGCACAGACCAGAAATGACTGTGAATGCATCCAAGACTGTTATCCAACCTCCTaGCCGCTCTGGCCCCTAAGA +
Preference number: 4 (lower is better)
Translates to: LNASFGAQTRNDCECIQDCYPTS*PLWPLR
Trigger: TCTTAGGGGCCAGAGCGGGCAGGAGGTTGGATAACA...GTCTTGGATGCATTCACAGTCATTTCTGGTCTGTGCACCAAAGGATGCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp CATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTCCTGCTCCCAAGGAGTaGCATCTGTGGAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HVSQMGTSKSILSSFKTPPAPKE*HLWKVA
Trigger: GGCCACCTTCCACAGATGGCACTCCTTGGGAGCAGG...AGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp ATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTCCACTCAGGGAGGGCTaGATCTGGCCTTCACCACAG +
Preference number: 4 (lower is better)
Translates to: ISGTCFPNGDLKIYTLQLPLREG*IWPSPQ
Trigger: CTGTGGTGAAGGCCAGATGCAGCCCTCCCTGAGTGG...AAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp TCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTGCATCCTTCCATCCATaGGACCTTGGACCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SQMGTSKSILSSFKTPSIASFHP*DLGPPL
Trigger: GAGCGGGGGTCCAAGGTCCCATGGATGGAAGGATGC...AATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp CTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGAGGGATGCCTGGAAGTaGATCTGCCTTGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LAHVSQMGTSKSILSSFKRDAWK*ICLASC
Trigger: GCAGCTGGCAAGGCAGATCCACTTCCAGGCATCCCT...CTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAAGTGAGTCCCCATTGTTaGCTGCAAGCCAAAGATATT +
Preference number: 4 (lower is better)
Translates to: SITASWAKVSTKVLSVVKVSPHC*LQAKDI
Trigger: AATATCTTTGGCTTGCAGCCAACAATGGGGACTCAC...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CTGAATGCATCCTTTGGTGCACAGACCAGAAATGACTGTGAATGCATCCAAGACTGCAGAGGGAGGGGCTaGAGAAAGACTTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LNASFGAQTRNDCECIQDCRGRG*RKTSVL
Trigger: CAGGACTGAAGTCTTTCTCCAGCCCCTCCCTCTGCA...GTCTTGGATGCATTCACAGTCATTTCTGGTCTGTGCACCAAAGGATGCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp CTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCCTCTTAGCTTCAAGGTGACATaGCCAGGCAAGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LLWDSNCDISLRTHRLPLSFKVT*PGKWQS
Trigger: GCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCT...AAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTAGACACCATTGCCTTTaGTCTACAACTGAGGAAACA +
Preference number: 4 (lower is better)
Translates to: HEHHCLLGQSEHKGPLCGRHHCL*STTEET
Trigger: TGTTTCCTCAGTTGTAGACCAAAGGCAATGGTGTCT...ACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCACACACATCAGACATTaGCAAACAGTAGTACAGATT +
Preference number: 4 (lower is better)
Translates to: GDMARQVAEPDLGLHTLSTHIRH*QTVVQI
Trigger: AATCTGTACTACTGTTTGCCAATGTCTGATGTGTGT...GGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp TATGAACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCAGGTCCTCAAACCAAGTTCTTTACTaGAGGACTTCTTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: YELMDKNSGPGVRRPRSSNQVLY*RTSWNL
Trigger: GAGGTTCCAAGAAGTCCTCCAGTAAAGAACTTGGTT...TGAGGACCTGGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp AACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTACACATCCAGGCATTTaGGCAAGAAACTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: NHEHHCLLGQSEHKGPLCTHPGI*ARNFFQ
Trigger: CTGGAAGAAGTTTCTTGCCCAAATGCCTGGATGTGT...ACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507481.2
CDS-3UTR TCA 90 bp CTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCCTCTTTCTCAAAGAGTTGTGTaGGAAGTTCCGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLWDSNCDISLRTHRLPLSQRVV*EVPGLS
Trigger: GCTCAGCCCCGGAACTTCTCACACAACTCTTTGAGA...AAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp TGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCATGGAACCACCCCTGTaGTTTTTGCTACCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WPLLWDSNCDISLRTHRLMEPPL*FLLPLW
Trigger: CCAGAGAGGTAGCAAAAATCACAGGGGTGGTTCCAT...GAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp TGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACAAAGGTCTCATTGGTaGGGGCGCCGGGCTTTAACC +
Preference number: 4 (lower is better)
Translates to: WHMFPKWGPQNLYSPALRQRSHW*GRRALT
Trigger: GGTTAAAGCCCGGCGCCCTCACCAATGAGACCTTTG...TCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp CAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTTGGACCCCCGCTCGTaGCTGGGCCATGGGGACCTG +
Preference number: 4 (lower is better)
Translates to: QNLYSPALRLLAFNLHLLLDPRS*LGHGDL
Trigger: CAGGTCCCCATGGCCCAGGCACGAGCGGGGGTCCAA...GAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp AGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGGACAGTCCTGCTGGCAGGGATaGCTGGAAGTGGATCTGCCT +
Preference number: 4 (lower is better)
Translates to: SFKTPSIQSTFTLPWVGQSCWQG*LEVDLP
Trigger: AGGCAGATCCACTTCCAGGCATCCCTGCCAGCAGGA...CTGTCCTACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp GCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTGAGTCTGCAGCCTaGTTCAGCAAGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: AHVSQMGTSKSILSSFKTPESAA*FSKDTA
Trigger: GGCAGTGTCCTTGCTGAAGCAGGCTGCAGACTCAGG...AGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp GCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTAGAGGAGGCCAAGGTTaGCTGTGCTCGAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: AHVSQMGTSKSILSSFKTRGGQG*LCSRHV
Trigger: CACATGCCTCGAGCACAGGCAACCTTGGCCTCCTCT...AGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp CTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTCTCAACCACATCTATaGTATTCAACTTGGGCTAAC +
Preference number: 4 (lower is better)
Translates to: LFLTVLAQVLKIWGKVGGSQPHL*YSTWAN
Trigger: GTTAGCCCAAGTTGAATAGCATAGATGTGGTTGAGA...CCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp CTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGAGTCTGAGGCCCATCTaGGCTGGTGGACTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: LAHVSQMGTSKSILSSFKSLRPI*AGGLRS
Trigger: ACTCCTAAGTCCACCAGCCCAGATGGGCCTCAGACT...CTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp ATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGCTGGCAGGGATGCCTaGAAGTGGATCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: ILSSFKTPSIQSTFTLPWAGRDA*KWICLA
Trigger: GGCAAGGCAGATCCACTTCCAGGCATCCCTGCCAGC...CCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp TGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGAACCCCGAGGAAAGCTTaGGCCTCTCTCAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: WHMFPKWGPQNLYSPALRTPRKA*ASLKPE
Trigger: CTCAGGCTTGAGAGAGGCCCAAGCTTTCCTCGGGGT...TCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GGTATCTGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAACACTCCTTTCCAGTaGGTAGGGGTGTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GIWPLLWDSNCDISLRTHNTPFQ*VGVWGN
Trigger: ATTCCCCCACACCCCTACCCACTGGAAAGGAGTGTT...GTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCAGATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGATCTGGCCTCTTCTTTaGGACTCAAATTGTGATATC +
Preference number: 4 (lower is better)
Translates to: AQVLKIWGKVGGYLASSLIWPLL*DSNCDI
Trigger: GATATCACAATTTGAGTCCCAAAGAAGAGGCCAGAT...CAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GGGCAAGAAACTTCTTCCAGCCATGTACGTGAAATTGCTTGGGAACCTGAACTCCAGGTGCTTAAGATTTaGGGGAAGGTGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: GQETSSSHVREIAWEPELQVLKI*GKVGGY
Trigger: ATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG...GAGTTCAGGTTCCCAAGCAATTTCACGTACATGGCTGGAAGAAGTTTCTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507481.2
CDS-3UTR CCA 90 bp AGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGGACAGGATGGACAAGAACTCTaGGCCAGGAGTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SFKTPSIQSTFTLPWVGQDGQEL*ARSQEA
Trigger: GGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATC...CTGTCCTACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTGGCCAGGCTGGTTaGTCTCCACTCAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: VSQMGTSKSILSSFKTPSIGQAG*SPLSHG
Trigger: CCCATGACTGAGTGGAGACCAACCAGCCTGGCCAAT...GCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp AAGTCATGCAACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTAACCTGAACTCCCGCTaGAATTTCTTAGCCAAAACC +
Preference number: 4 (lower is better)
Translates to: KSCNHEHHCLLGQSEHKGNLNSR*NFLAKT
Trigger: GGTTTTGGCTAAGAAATTCCAGCGGGAGTTCAGGTT...ACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTTGCATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507481.2
3UTR CAA 72 bp AATTTCTACCTGGAAAGGGTTGCTGATGCTCTATTTTaGTTATCCAACCTCCTGCCCGCTCTGGCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: NFYLERVADALF*LSNLLPALAPK
Trigger: CTTAGGGGCCAGAGCGGGCAGGAGGTTGGATAACAAAAATAGAGCATCAGCAACCCTTTCCAGGTAGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp AGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGGACAGCCTCTGCCATGCTCATaGCACAAGCCCGCATTGTAC +
Preference number: 4 (lower is better)
Translates to: SFKTPSIQSTFTLPWVGQPLPCS*HKPALY
Trigger: GTACAATGCGGGCTTGTGTCATGAGCATGGCAGAGG...CTGTCCTACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp CTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCCTCTTATTTCCCAGAGCGGCTaGCTGCTGGTAACATCTCAA +
Preference number: 4 (lower is better)
Translates to: LLWDSNCDISLRTHRLPLISQSG*LLVTSQ
Trigger: TTGAGATGTTACCAGCAGTCAGCCGCTCTGGGAAAT...AAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp CAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAACCTCCTGGGCCAAAGTaGGCACAAAGGTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QMGTSKSILSSFKTPSIQPPGPK*AQRSSL
Trigger: CAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGG...TTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp ACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTGCCTCGGACTCGATaGTACTACTGGCATGCAGGA +
Preference number: 4 (lower is better)
Translates to: TFLAHVSQMGTSKSILSSLPRTR*YYWHAG
Trigger: TCCTGCATGCCAGTAGTAGCATCGAGTCCGAGGCAA...GCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp TCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTGCTGTAGCCGCGGGCTaGAGCTTTCTGGAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: SQMGTSKSILSSFKTPSIAVAAG*SFLEVR
Trigger: TCTTACTTCCAGAAAGCTGCAGCCCGCGGCTACAGC...AATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp CAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAACATTGTACTGCGCTTTaGTGTAGCCGCGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QMGTSKSILSSFKTPSIQHCTAL*CSRGLQ
Trigger: CTGCAGCCCGCGGCTACAGCAAAGCGCAGTACAATG...TTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp ATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGAGAGGAGGCCAAGGTTaGCTGTGCTCGAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: ILSSFKTPSIQSTFTLPWRGGQG*LCSRHV
Trigger: CACATGCCTCGAGCACAGGCAACCTTGGCCTCCTCT...CCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp GCCTTTGGTCTACAACTGAGGAAACAATATAGGGAGTCAGGTCACAGCTTCAAGGAGGGCAGACACCATTaGCTTTGGTCTACAACTGAG +
Preference number: 4 (lower is better)
Translates to: AFGLQLRKQYRESGHSFKEGRHH*LWSTTE
Trigger: CTCAGTTGTAGACCAAAGGCAATGGTGTCTGCCCTC...CTTGAAGCTGTGACCTGACTCCCTATATTGTTTCCTCAGTTGTAGACCAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp TGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGAGTTCCTTTTCACCAGTaGGCTGAGGCTGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: WHMFPKWGPQNLYSPALRVPFHQ*AEAGLV
Trigger: AACCAGCCCAGCCTCAGCCCACTGGTGAAAAGGAAC...TCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp ACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCGGCTGTGGCCCTGGCTaGCAGCCAACTGATAATAAA +
Preference number: 4 (lower is better)
Translates to: TFLAHVSQMGTSKSILSSGCGPG*QPTDNK
Trigger: TTTATTATCAGTTGGCTGCCAGCCAGGGCCACAGCC...GCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GATGTGTATTGTGAATCTATAAAAAGGGGACGTCTGGTGCAGCATTTCCCAAACCTCGTAGTAGGCACCTaGCATAGCGGTACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: DVYCESIKRGRLVQHFPNLVVGT*HSGTEP
Trigger: TGGCTCAGTACCGCTATGCCAGGTGCCTACTACGAG...GTTTGGGAAATGCTGCACCAGACGTCCCCTTTTTATAGATTCACAATACACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp AAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCGGGCTGCAGCCCCCATaGAAAAGAGGGCTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: KSILSSFKTPSIQSTFTLGLQPP*KRGLAA
Trigger: GGCTGCGAGCCCTCTTTTCCATGGGGGCTGCAGCCC...GAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCCTCTTGTACGTGAAATTGCTTaGGAACCTGAACTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: LLWDSNCDISLRTHRLPLVREIA*EPELPL
Trigger: CAGCGGGAGTTCAGGTTCCCAAGCAATTTCACGTAC...AAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp ACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCAACAGAGGTGAATGGTaGGCTAGTCTCGAGGATGGC +
Preference number: 4 (lower is better)
Translates to: TFLAHVSQMGTSKSILSSNRGEW*ASLEDG
Trigger: GCCATCCTCGAGACTAGCCCACCATTCACCTCTGTT...GCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp GATGTGTATTGTGAATCTATAAAAAGGGGACGTCTGGTGCAGCATTTCCCAAACACACTTTCCTCTTCTTaGCTGTACTGGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DVYCESIKRGRLVQHFPNTLSSS*LYWRRC
Trigger: GCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGT...GTTTGGGAAATGCTGCACCAGACGTCCCCTTTTTATAGATTCACAATACACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp AGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGGACAGACACTTTCCTCTTCTTaGCTGTACTGGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SFKTPSIQSTFTLPWVGQTLSSS*LYWRRC
Trigger: GCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGT...CTGTCCTACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp TGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGATTGCCTCGGACTCGATaGTACTACTGGCATGCAGGA +
Preference number: 4 (lower is better)
Translates to: WHMFPKWGPQNLYSPALRLPRTR*YYWHAG
Trigger: TCCTGCATGCCAGTAGTAGCATCGAGTCCGAGGCAA...TCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp CCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCTTCCAAGGTGGTACCTaGTCTGTGAGTCCCCATTGT +
Preference number: 4 (lower is better)
Translates to: PKWGPQNLYSPALRLLAFFQGGT*SVSPHC
Trigger: ACAATGGGGACTCACAGAGCAGGTACCACCTTGGAA...GAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR GCA 90 bp AAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCCTGCATGGGGCCTTaGACTCAGTGCTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: KSILSSFKTPSIQSTFTLPCMGP*TQCWGH
Trigger: GTGTCCCCAGCACTGAGTGCAAGGCCCCATGCAGGG...GAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp TCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCAAGGGATGCCTGGAAGTaGATCTGCCTTGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SILSSFKTPSIQSTFTLPRDAWK*ICLASC
Trigger: GCAGCTGGCAAGGCAGATCCACTTCCAGGCATCCCT...TGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp GGGCAAGAAACTTCTTCCAGCCATGTACGTGAAATTGCTTGGGAACCTGAACTCGTGAGTCCCCATTGTTaGCTGCAAGCCAAAGATATT +
Preference number: 4 (lower is better)
Translates to: GQETSSSHVREIAWEPELVSPHC*LQAKDI
Trigger: AATATCTTTGGCTTGCAGCCAACAATGGGGACTCAC...GAGTTCAGGTTCCCAAGCAATTTCACGTACATGGCTGGAAGAAGTTTCTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507481.2
CDS-3UTR CCA 90 bp CACCTAGACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTAGGTGGGTGGGTATCTaGCCTCTTCTTTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: HLDISGTCFPNGDLKIYTRWVGI*PLLWDS
Trigger: TGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCT...AGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGTCTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp ATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTTGGGGGAAGGTGGGTaGGTATCTGGCCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ISGTCFPNGDLKIYTLQLLGEGG*VSGLFF
Trigger: AAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAA...AAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CACCTAGACATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTAGCATCACTGCCTCCTaGGCCAAAGTGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: HLDISGTCFPNGDLKIYTSITAS*AKVSTK
Trigger: CTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT...AGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAATGTCTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCGTACGTGAAATTGCTTaGGAACCTGAACTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: VSQMGTSKSILSSFKTPSVREIA*EPELPL
Trigger: CAGCGGGAGTTCAGGTTCCCAAGCAATTTCACGTAC...GCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp AAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCTCAGTCATGGGATTGTaGGGGGTGGGCGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KSILSSFKTPSIQSTFTLSVMGL*GVGGGL
Trigger: GAGCCCACCGCCCACCCCCCACAATCCCATGACTGA...GAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp CTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGACTCAAAACAGCCAAGGATTTTTaGTCCCTTGACAACACCTTT +
Preference number: 4 (lower is better)
Translates to: LKIWGKVGGYLASSLGLKTAKDF*SLDNTF
Trigger: AAAGGTGTTGTCAAGGGACCAAAAATCCTTGGCTGT...TTTGAGTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp AGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGGACAGGTGCTGGGCATTGGGTaGGGGGAGTTGAGTATAATC +
Preference number: 4 (lower is better)
Translates to: SFKTPSIQSTFTLPWVGQVLGIG*GELSII
Trigger: GATTATACTCAACTCCCCCCACCCAATGCCCAGCAC...CTGTCCTACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
3UTR CAA 72 bp GGAAAGATCAGTCACTTACCAGCCATGTACGTGAAATaGCTTGGGAACCTGAACTCCCGCTGGAATTTCTAC +
Preference number: 4 (lower is better)
Translates to: GKISHLPAMYVK*LGNLNSRWNFY
Trigger: GTAGAAATTCCAGCGGGAGTTCAGGTTCCCAAGCAATTTCACGTACATGGCTGGTAAGTGACTGATCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp CAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCCAGTGTTCTACCCGCTaGGGTCCTGCTGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: QNLYSPALRLLAFNLHLLQCSTR*GPAGRD
Trigger: ATCCCTGCCAGCAGGACCTCAGCGGGTAGAACACTG...GAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR GCA 90 bp AGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGGACAGGAAGTAAGAAAAGGCTaGCGTGTGGTCGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: SFKTPSIQSTFTLPWVGQEVRKG*RVVATL
Trigger: AAGAGTGGCGACCACACGGCAGCCTTTTCTTACTTC...CTGTCCTACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp TGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACAGGTGCTTAAGATTTaGGGGAAGGTGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: WHMFPKWGPQNLYSPALRQVLKI*GKVGGY
Trigger: ATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG...TCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp ATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTCCTTGCACTCAGTGCTaGGGACACTGGAATACAAAG +
Preference number: 4 (lower is better)
Translates to: ISGTCFPNGDLKIYTLQLPCTQC*GHWNTK
Trigger: CTTTGTATTCCAGTGTCCCCAGCACTGAGTGCAAGG...AAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp CCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCTGTATAGGCGGCGAGTaGGGGGCAATACAGAATTAT +
Preference number: 4 (lower is better)
Translates to: PKWGPQNLYSPALRLLAFCIGGE*GAIQNY
Trigger: ATAATTCTGTATTGCCCCCCACTCGCCGCCTATACA...GAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp CAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCGGTAGGGCTCCTTGGTaGAAAGCACCCCGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QNLYSPALRLLAFNLHLLGRAPW*KAPRGK
Trigger: CTTTCCTCGGGGTGCTTTTCACCAAGGAGCCCTACC...GAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp GCCTTTGGTCTACAACTGAGGAAACAATATAGGGAGTCAGGTCACAGCTTCAAGTTGGGACTCAAATTGTaGTATCTCTCTGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: AFGLQLRKQYRESGHSFKLGLKL*YLSENP
Trigger: TGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAA...CTTGAAGCTGTGACCTGACTCCCTATATTGTTTCCTCAGTTGTAGACCAAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp CAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCGTCACAGCTTCAAGGTaGCATGGCCAGGCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: QNLYSPALRLLAFNLHLLVTASR*HGQASG
Trigger: GCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGAC...GAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp AAGTCAAGCAGACACATCCAGGCATTTGGGCAAGAAACTTCTTCCAGCCATGTACCTTTGGTCTACAACTaGGGAAACAATATAGGGAGT +
Preference number: 4 (lower is better)
Translates to: KSSRHIQAFGQETSSSHVPLVYN*GNNIGS
Trigger: ACTCCCTATATTGTTTCCTCAGTTGTAGACCAAAGG...TACATGGCTGGAAGAAGTTTCTTGCCCAAATGCCTGGATGTGTCTGCTTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507481.2
CDS-3UTR CCA 90 bp GGTATCTGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACACACCTAGACATTTCTaGCACATGTTTCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: GIWPLLWDSNCDISLRTHTPRHF*HMFPKW
Trigger: CCATTTGGGAAACATGTGCCAGAAATGTCTAGGTGT...GTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCAGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp GGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATAAGCGATGGAAACACTaGGCTGGAAGAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: GPQNLYSPALRLLAFNLHKRWKH*AGRAAE
Trigger: TTCAGCAGCTCTTCCAGCTCAGTGTTTCCATCGCTT...ATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR TCA 90 bp GGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATATTTCCCAGAGCGGCTaGCTGCTGGTAACATCTCAA +
Preference number: 4 (lower is better)
Translates to: GPQNLYSPALRLLAFNLHISQSG*LLVTSQ
Trigger: TTGAGATGTTACCAGCAGTCAGCCGCTCTGGGAAAT...ATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp TCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTTCTTTAGGGCTGAGGTaGGAAGTTCTTAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: SQMGTSKSILSSFKTPSISLGLR*EVLSQN
Trigger: GTTTTGGCTAAGAACTTCTCACCTCAGCCCTAAAGA...AATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000194118.8
CDS-3UTR TCA 90 bp CTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGCCTTTGGTCTACAACTaGGGAAACAATATAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LAHVSQMGTSKSILSSFKPLVYN*GNNIGS
Trigger: ACTCCCTATATTGTTTCCTCAGTTGTAGACCAAAGG...CTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp TCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCAGGATCAAGACCGCAGTaGCTGAACAGCCAAGGATTT +
Preference number: 4 (lower is better)
Translates to: SILSSFKTPSIQSTFTLPGSRPQ*LNSQGF
Trigger: AAATCCTTGGCTGTTCAGTCACTGCGGTCTTGATCC...TGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp ATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGATGCTACTACTGGCATaGAGGAAGCCAAAATCACCG +
Preference number: 4 (lower is better)
Translates to: ILSSFKTPSIQSTFTLPWMLLLA*RKPKSP
Trigger: CGGTGATTTTGGCTTCCTGCATGCCAGTAGTAGCAT...CCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp GGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATCGGGAAGACATCCATTaGAAGGCATCCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: GPQNLYSPALRLLAFNLHREDIH*KASFHP
Trigger: TGGATGGAAGGATGCCTTCCAATGGATGTCTTCCCG...ATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp TCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCACGGGAAGACATCCATTaGAAGGCATCCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: SILSSFKTPSIQSTFTLPREDIH*KASFHP
Trigger: TGGATGGAAGGATGCCTTCCAATGGATGTCTTCCCG...TGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CCA 90 bp CAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAAATGAACAGAGGTGAATaGTGGGCTAGTCTCGAGGAT +
Preference number: 4 (lower is better)
Translates to: QMGTSKSILSSFKTPSIQMNRGE*WASLED
Trigger: ATCCTCGAGACTAGCCCACCATTCACCTCTGTTCAT...TTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp CTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTATTGGGACTCAAATTGTaGTATCTCTCTGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: LSSFKTPSIQSTFTLPWVLGLKL*YLSENP
Trigger: TGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAA...TACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp TGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGATTTTTCATAGGTCACTaGATGCATCCTTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: WHMFPKWGPQNLYSPALRFFIGH*MHPLVH
Trigger: GTGCACCAAAGGATGCATTCAGTGACCTATGAAAAA...TCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp GCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTACCTCTCTGGATCTGTaGCCACTTTTACGTTATGTT +
Preference number: 4 (lower is better)
Translates to: AHVSQMGTSKSILSSFKTTSLDL*PLLRYV
Trigger: AACATAACGTAAAAGTGGGCACAGATCCAGAGAGGT...AGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp CTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAAGACACCATTGCCTTTaGTCTACAACTGAGGAAACA +
Preference number: 4 (lower is better)
Translates to: LSSFKTPSIQSTFTLPWVRHHCL*STTEET
Trigger: TGTTTCCTCAGTTGTAGACCAAAGGCAATGGTGTCT...TACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp CTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAACACCTAGACATTTCTaGCACATGTTTCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: LSSFKTPSIQSTFTLPWVTPRHF*HMFPKW
Trigger: CCATTTGGGAAACATGTGCCAGAAATGTCTAGGTGT...TACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432126.7
ENST00000507481.2
CDS-3UTR TCA 90 bp AAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCAGTGTCAGGACTCCCTaGAAACAGCATCTCCGGATA +
Preference number: 4 (lower is better)
Translates to: KSILSSFKTPSIQSTFTLSVRTP*KQHLRI
Trigger: TATCCGGAGATGCTGTTTTCAGGGAGTCCTGACACT...GAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp CAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCCAGGTGCTTAAGATTTaGGGGAAGGTGGGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: QNLYSPALRLLAFNLHLLQVLKI*GKVGGY
Trigger: ATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG...GAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CCA 90 bp GCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTTACTGGAGGACTTCTTaGAACCTCAAATATGCTGAT +
Preference number: 4 (lower is better)
Translates to: AHVSQMGTSKSILSSFKTYWRTS*NLKYAD
Trigger: ATCAGCATATTTGAGGTTCCAAGAAGTCCTCCAGTA...AGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CCA 90 bp AAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCTCTCACACTTCCTCTaGGGCACTGATGATGAGTCA +
Preference number: 4 (lower is better)
Translates to: KSILSSFKTPSIQSTFTLLSHFL*GTDDES
Trigger: TGACTCATCATCAGTGCCCCAGAGGAAGTGTGAGAG...GAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp TGGAGGACTTCTTGGAACCTCAAATATGCTGATGTGTATTGTGAATCTATAAAAAATTGCTTGGGAACCTaGACTCCCGCTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: WRTSWNLKYADVYCESIKNCLGT*TPAGIS
Trigger: AGAAATTCCAGCGGGAGTTCAGGTTCCCAAGCAATT...TTTTATAGATTCACAATACACATCAGCATATTTGAGGTTCCAAGAAGTCCTCCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR TCA 90 bp CAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCGGATTTTTGGTCCCTTaGCAACACCTTTCTCACGAC +
Preference number: 4 (lower is better)
Translates to: QNLYSPALRLLAFNLHLLGFLVP*QHLSHD
Trigger: GTCGTGAGAAAGGTGTTGTCAAGGGACCAAAAATCC...GAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR GCA 90 bp CAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAAAGAAATGACTGTGAATaGATCCAAGACTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: QMGTSKSILSSFKTPSIQRNDCE*IQDSSV
Trigger: CACAGATGAGTCTTGGATGCATTCACAGTCATTTCT...TTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS GCA 90 bp GGGGAAGAGCTCGGCCCAGGAGTCCCGGGAGGCGCCACATGTCGCTaGCAGCACCACAGAGAGCTCGCAGCCGAAAGCGCGAGACCAACC +
Preference number: 5 (lower is better)
Translates to: GEELGPGVPGGATCR*QHHRELAAESARPT
Trigger: GGTTGGTCTCGCGCTTTCGGCTGCGAGCTCTCTGTGGTGCTGGCAGCGACATGTGGCGCCTCCCGGGACTCCTGGGCCGAGCTCTTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS GCA 90 bp GTGCCAGGAGCAGTGTTCTACCCGCTGAGGTCCTGCTGGCAGGGATaGCTGGAAGTGGATCTGCCTTGCCAGCTGCAGGGCCAGCACGGC +
Preference number: 5 (lower is better)
Translates to: VPGAVFYPLRSCWQG*LEVDLPCQLQGQHG
Trigger: GCCGTGCTGGCCCTGCAGCTGGCAAGGCAGATCCACTTCCAGGCATCCCTGCCAGCAGGACCTCAGCGGGTAGAACACTGCTCCTGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS GCA 90 bp TGTGGGGGAATAGCCCTGCTGGAGGCTTCCAGGCTGGCTCCGAGATaGCCACTTCTGCAGAGGAGGCCAAGGTTGCCTGTGCTCGAGGCA +
Preference number: 5 (lower is better)
Translates to: CGGIALLEASRLAPR*PLLQRRPRLPVLEA
Trigger: TGCCTCGAGCACAGGCAACCTTGGCCTCCTCTGCAGAAGTGGGCATCTCGGAGCCAGCCTGGAAGCCTCCAGCAGGGCTATTCCCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
ENST00000509110.1
CDS-3UTR CAA 90 bp AGGGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGCCCACAAAGGTCTCATaGGTGAGGGCGCCGGGCTTT +
Preference number: 5 (lower is better)
Translates to: RAASGLHHRTPSGQTVNQPTKVS*VRAPGF
Trigger: AAAGCCCGGCGCCCTCACCAATGAGACCTTTGTGGG...CTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS GCA 90 bp CTCAAGCCTGAGTCTGCAGCCTGCTTCAGCAAGGACACTGCCCTCTaGCGCTCAGGGTTCCACGAAGAGGCTGGGTCTCGTAGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: LKPESAACFSKDTAL*RSGFHEEAGSRSRH
Trigger: GTGCCTACTACGAGACCCAGCCTCTTCGTGGAACCCTGAGCGGCAGAGGGCAGTGTCCTTGCTGAAGCAGGCTGCAGACTCAGGCTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000502729.1
ENST00000507481.2
CDS GCA 90 bp TGGCTCCGAGATGCCCACTTCTGCAGAGGAGGCCAAGGTTGCCTGTaGTCGAGGCATGTGGTAGGCGTGAGGTTCCTGCTAGCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: WLRDAHFCRGGQGCL*SRHVVGVRFLLAGC
Trigger: ACACCCTGCTAGCAGGAACCTCACGCCTACCACATGCCTCGAGCACAGGCAACCTTGGCCTCCTCTGCAGAAGTGGGCATCTCGGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
ENST00000509110.1
CDS CCA 90 bp AGGCACAGGAACCAGCAAAGTGGAGGAGGTAGTCTGAGGCCCATCTaGGCTGGTGGACTTAGGAGTCACCCTCCAGAGGCTAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RHRNQQSGGGSLRPI*AGGLRSHPPEARSQ
Trigger: CTGGGACCTAGCCTCTGGAGGGTGACTCCTAAGTCCACCAGCCCAGATGGGCCTCAGACTACCTCCTCCACTTTGCTGGTTCCTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS TCA 90 bp CTGTCGAGGTTAGGCACAGGAACCAGCAAAGTGGAGGAGGTAGTCTaGGGCCCATCTGGGCTGGTGGACTTAGGAGTCACCCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LSRLGTGTSKVEEVV*GPSGLVDLGVTLQR
Trigger: CCTCTGGAGGGTGACTCCTAAGTCCACCAGCCCAGATGGGCCTCAGACTACCTCCTCCACTTTGCTGGTTCCTGTGCCTAACCTCGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS CCA 90 bp ATGGCATCCCATAGGGTGTTCGGGGAGACACGGGAAGACATCCATTaGAAGGCATCCTTCCATCCATGGGACCTTGGACCCCCGCTCGTG +
Preference number: 5 (lower is better)
Translates to: MASHRVFGETREDIH*KASFHPWDLGPPLV
Trigger: CACGAGCGGGGGTCCAAGGTCCCATGGATGGAAGGATGCCTTCCAATGGATGTCTTCCCGTGTCTCCCCGAACACCCTATGGGATGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS-3UTR CAA 90 bp CCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGACGCGCGAGACCAACCCTaGGGACAGCGGCTAGAAAGG +
Preference number: 5 (lower is better)
Translates to: PGKWQSQTWVFTHFPLLDARDQP*GQRLER
Trigger: CCTTTCTAGCCGCTGTCCCAAGGGTTGGTCTCGCGC...GTCAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194118.8
CDS-3UTR CAA 90 bp AGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGACTCCATCCATGGGACCTaGGACCCCCGCTCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: RCLRFGGRWVGIWPLLWDSIHGT*DPRSCL
Trigger: CAGGCACGAGCGGGGGTCCAAGGTCCCATGGATGGA...GTCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CAA 90 bp AACCATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGAGCTAGAGGACGCTaGGGCTCCCCGGGTGAAAGA +
Preference number: 5 (lower is better)
Translates to: NHEHHCLLGQSEHKGPLCGARGR*GSPGER
Trigger: TCTTTCACCCGGGGAGCCCAAGCGTCCTCTAGCTCC...ACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS GCA 90 bp TTTCACCAGTGGGCTGAGGCTGGGCTGGTTTTGCCTCGGACTCGATaGTACTACTGGCATGCAGGAAGCCAAAATCACCGGGACCTTCCT +
Preference number: 5 (lower is better)
Translates to: FHQWAEAGLVLPRTR*YYWHAGSQNHRDLP
Trigger: AGGAAGGTCCCGGTGATTTTGGCTTCCTGCATGCCAGTAGTAGCATCGAGTCCGAGGCAAAACCAGCCCAGCCTCAGCCCACTGGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS GCA 90 bp ATGACACAAGCCCGCATTGTACTGCGCTTTGCTGTAGCCGCGGGCTaGAGCTTTCTGGAAGTAAGAAAAGGCTGCCGTGTGGTCGCCACT +
Preference number: 5 (lower is better)
Translates to: MTQARIVLRFAVAAG*SFLEVRKGCRVVAT
Trigger: AGTGGCGACCACACGGCAGCCTTTTCTTACTTCCAGAAAGCTGCAGCCCGCGGCTACAGCAAAGCGCAGTACAATGCGGGCTTGTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000502729.1
ENST00000506775.1
ENST00000508751.1
CDS-3UTR CAA 90 bp GGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCCACACTTTCCTCTTCTaGACTGTACTGGCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GDMARQVAEPDLGLHTLSHTFLF*TVLAQV
Trigger: CACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG...GGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp GAGCTTCCCACAAAGGTCTCATTGGTGAGGGCGCCGGGCTTTAACCCAGCATCCCACACTTTCCTCTTCTaGACTGTACTGGCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: ELPTKVSLVRAPGFNPASHTFLF*TVLAQV
Trigger: CACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG...GGATGCTGGGTTAAAGCCCGGCGCCCTCACCAATGAGACCTTTGTGGGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS GCA 90 bp TGCCTCTGCCATGCTCATGACACAAGCCCGCATTGTACTGCGCTTTaGTGTAGCCGCGGGCTGCAGCTTTCTGGAAGTAAGAAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: CLCHAHDTSPHCTAL*CSRGLQLSGSKKRL
Trigger: CAGCCTTTTCTTACTTCCAGAAAGCTGCAGCCCGCGGCTACAGCAAAGCGCAGTACAATGCGGGCTTGTGTCATGAGCATGGCAGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000502729.1
ENST00000506775.1
ENST00000508751.1
CDS GCA 90 bp CCCACCATAGCAGATTTTAAGCTGCCAACAGCTCTCACAGCCTGGTaGAAGCCAGCTCTGGCGTACTACTGCAACTGCCCAACGGTCACA +
Preference number: 5 (lower is better)
Translates to: PTIADFKLPTALTAW*KPALAYYCNCPTVT
Trigger: TGTGACCGTTGGGCAGTTGCAGTAGTACGCCAGAGCTGGCTTGCACCAGGCTGTGAGAGCTGTTGGCAGCTTAAAATCTGCTATGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502729.1
CDS-3UTR CAA 90 bp CTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGGCTCCTCTCAAAGAGTaGTGTGAGAAGTTCCGGGGC +
Preference number: 5 (lower is better)
Translates to: LFLTVLAQVLKIWGKVGGAPLKE*CEKFRG
Trigger: GCCCCGGAACTTCTCACACAACTCTTTGAGAGGAGC...CCCACCCACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CAA 90 bp TCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGCCATGTACGTGAAATaGCTTGGGAACCTGAACTCC +
Preference number: 5 (lower is better)
Translates to: SGHSFKVTWPGKWQSQTWAMYVK*LGNLNS
Trigger: GGAGTTCAGGTTCCCAAGCAATTTCACGTACATGGC...CCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp AGGGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGAGGATTTTTGGTCCCTaGACAACACCTTTCTCACGA +
Preference number: 5 (lower is better)
Translates to: RAASGLHHRTPSGQTVNQRIFGP*TTPFSR
Trigger: TCGTGAGAAAGGTGTTGTCAAGGGACCAAAAATCCT...CTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS CCA 90 bp ATTCCCACCATAGCAGATTTTAAGCTGCCAACAGCTCTCACAGCCTaGTGCAAGCCAGCTCTGGCGTACTACTGCAACTGCCCAACGGTC +
Preference number: 5 (lower is better)
Translates to: IPTIADFKLPTALTA*CKPALAYYCNCPTV
Trigger: GACCGTTGGGCAGTTGCAGTAGTACGCCAGAGCTGGCTTGCACCAGGCTGTGAGAGCTGTTGGCAGCTTAAAATCTGCTATGGTGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502729.1
CDS-3UTR CAA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAAGCTCCTCTCAAAGAGTaGTGTGAGAAGTTCCGGGGC +
Preference number: 5 (lower is better)
Translates to: SITASWAKVSTKVLSVVKAPLKE*CEKFRG
Trigger: GCCCCGGAACTTCTCACACAACTCTTTGAGAGGAGC...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CAA 90 bp GTCAGGTCACAGCTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGTGTGAGTCCCCATTGTaGGCTGCAAGCCAAAGATAT +
Preference number: 5 (lower is better)
Translates to: VRSQLQGDMARQVAEPDLCESPL*AASQRY
Trigger: ATATCTTTGGCTTGCAGCCAACAATGGGGACTCACA...CAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAGCTGTGACCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp CCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACACTTTCCTCTTCTTGACCACACTTTCCTCTTCTaGACTGTACTGGCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: PGKWQSQTWVFTHFPLLDHTFLF*TVLAQV
Trigger: CACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG...GTCAAGAAGAGGAAAGTGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp GGCTGCATCTGGCCTTCACCACAGGACGCCCAGTGGCCAGACTGTGAACCAGCCTACACACATCAGACATaGGCAAACAGTAGTACAGAT +
Preference number: 5 (lower is better)
Translates to: GCIWPSPQDAQWPDCEPAYTHQT*ANSSTD
Trigger: ATCTGTACTACTGTTTGCCAATGTCTGATGTGTGTA...GGCTGGTTCACAGTCTGGCCACTGGGCGTCCTGTGGTGAAGGCCAGATGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS GCA 90 bp TTTGCTGTAGCCGCGGGCTGCAGCTTTCTGGAAGTAAGAAAAGGCTaGCGTGTGGTCGCCACTCTTCATGTTCTCTGTTCCCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: FAVAAGCSFLEVRKG*RVVATLHVLCSQEV
Trigger: AACTTCCTGGGAACAGAGAACATGAAGAGTGGCGACCACACGGCAGCCTTTTCTTACTTCCAGAAAGCTGCAGCCCGCGGCTACAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000502729.1
ENST00000508751.1
CDS-3UTR CAA 90 bp AGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAAACGGGAAGACATCCATaGGAAGGCATCCTTCCATCC +
Preference number: 5 (lower is better)
Translates to: SITASWAKVSTKVLSVVKTGRHP*EGILPS
Trigger: GGATGGAAGGATGCCTTCCAATGGATGTCTTCCCGT...TTTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CAA 90 bp CTTCAAGGTGACATGGCCAGGCAAGTGGCAGAGCCAGACCTGGGTCTTCACACATGTGAGTCCCCATTGTaGGCTGCAAGCCAAAGATAT +
Preference number: 5 (lower is better)
Translates to: LQGDMARQVAEPDLGLHTCESPL*AASQRY
Trigger: ATATCTTTGGCTTGCAGCCAACAATGGGGACTCACA...TGTGTGAAGACCCAGGTCTGGCTCTGCCACTTGCCTGGCCATGTCACCTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp GAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAAGCCATGTACGTGAAATaGCTTGGGAACCTGAACTCC +
Preference number: 5 (lower is better)
Translates to: EHHCLLGQSEHKGPLCGEAMYVK*LGNLNS
Trigger: GGAGTTCAGGTTCCCAAGCAATTTCACGTACATGGC...TTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp CTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCCTCTTACCCTGCATGGGGCCTaGCACTCAGTGCTGGGGACA +
Preference number: 5 (lower is better)
Translates to: LLWDSNCDISLRTHRLPLTLHGA*HSVLGT
Trigger: TGTCCCCAGCACTGAGTGCAAGGCCCCATGCAGGGT...AAGAGGGAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS TCA 90 bp AAAGATATTTCACAGCTCTCTGCTCATCCAGGTAGGGCTCCTTGGTaGAAAGCACCCCGAGGAAAGCTTGGGCCTCTCTCAAGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: KDISQLSAHPGRAPW*KAPRGKLGPLSSLS
Trigger: ACTCAGGCTTGAGAGAGGCCCAAGCTTTCCTCGGGGTGCTTTTCACCAAGGAGCCCTACCTGGATGAGCAGAGAGCTGTGAAATATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000502729.1
ENST00000507481.2
CDS-3UTR CAA 90 bp TACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTCCATCCATGGGACCTaGGACCCCCGCTCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: YSPALRLLAFNLHLLSHGSIHGT*DPRSCL
Trigger: CAGGCACGAGCGGGGGTCCAAGGTCCCATGGATGGA...CCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CAA 90 bp GAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTGAATCTGTTCCCAGGAAGTaGAAAGCGATGGAAACACTG +
Preference number: 5 (lower is better)
Translates to: EHHCLLGQSEHKGPLCGESVPRK*KAMETL
Trigger: CAGTGTTTCCATCGCTTTCAACTTCCTGGGAACAGA...TTCACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CAA 90 bp GAGCTTCCCACAAAGGTCTCATTGGTGAGGGCGCCGGGCTTTAACCCAGCATCCTGTGGTGAAATGCCCTaGCATTTGTCTTCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: ELPTKVSLVRAPGFNPASCGEMP*HLSSKV
Trigger: TACCTTAGAAGACAAATGCAAGGGCATTTCACCACA...GGATGCTGGGTTAAAGCCCGGCGCCCTCACCAATGAGACCTTTGTGGGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS GCA 90 bp TTTGCTGTAGCCGCGGGCTGCAGCTTTCTGGAAGTAAGAAAAGGCTaGCGTGTGGTCGCCACTCTTCATGTTCTCTGTTCCTTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: FAVAAGCSFLEVRKG*RVVATLHVLCSFLL
Trigger: CAAAAGAAAGGAACAGAGAACATGAAGAGTGGCGACCACACGGCAGCCTTTTCTTACTTCCAGAAAGCTGCAGCCCGCGGCTACAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506775.1
CDS-3UTR CAA 90 bp CAGGTGCTTAAGATTTGGGGGAAGGTGGGTGGGTATCTGGCCTCTTCTTTGGGATCTGTTCCCAGGAAGTaGAAAGCGATGGAAACACTG +
Preference number: 5 (lower is better)
Translates to: QVLKIWGKVGGYLASSLGSVPRK*KAMETL
Trigger: CAGTGTTTCCATCGCTTTCAACTTCCTGGGAACAGA...TCCCAAAGAAGAGGCCAGATACCCACCCACCTTCCCCCAAATCTTAAGCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CAA 90 bp ACTTTCCTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGTGCTCTGTGAGTCCCCATaGTTGGCTGCAAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: TFLFLTVLAQVLKIWGKVLCESP*LAASQR
Trigger: TCTTTGGCTTGCAGCCAACAATGGGGACTCACAGAG...CACCTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp AGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGGACAGGAGGCTGGGCTGGTTTaGCCTCGGACTCGATGCTAC +
Preference number: 5 (lower is better)
Translates to: SFKTPSIQSTFTLPWVGQEAGLV*PRTRCY
Trigger: GTAGCATCGAGTCCGAGGCAAAACCAGCCCAGCCTC...CTGTCCTACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CAA 90 bp AAATTGCAGTATGAACTGATGGACAAGAACTCTGGGCCAGGAGTCAGGAGGCCCTGTGAGTCCCCATTGTaGGCTGCAAGCCAAAGATAT +
Preference number: 5 (lower is better)
Translates to: KLQYELMDKNSGPGVRRPCESPL*AASQRY
Trigger: ATATCTTTGGCTTGCAGCCAACAATGGGGACTCACA...GGGCCTCCTGACTCCTGGCCCAGAGTTCTTGTCCATCAGTTCATACTGCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp CATGAGCATCACTGCCTCCTGGGCCAAAGTGAGCACAAAGGTCCTCTCTGTGGTTCTACCTGGAAAGGGTaGCTGATGCTCTATTTTTGT +
Preference number: 5 (lower is better)
Translates to: HEHHCLLGQSEHKGPLCGSTWKG*LMLYFC
Trigger: ACAAAAATAGAGCATCAGCAACCCTTTCCAGGTAGA...ACCACAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp TGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACAGGCTCCTTCTTGCCTTTGAATaGGCCAGGCTGGTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: WPLLWDSNCDISLRTHRLLLAFE*ARLVGL
Trigger: GAGACCAACCAGCCTGGCCAATTCAAAGGCAAGAAG...GAGCCTGTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp TTTTGGTCCCTTGACAACACCTTTCTCACGACTCTGCCATCCTTCCCTTTCCACAGGACCACTAAGAAGTaGAGAGAGATGGGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: FWSLDNTFLTTLPSFPFHRTTKK*REMGWE
Trigger: TTCCCACCCCATCTCTCTCAACTTCTTAGTGGTCCT...GTGGAAAGGGAAGGATGGCAGAGTCGTGAGAAAGGTGTTGTCAAGGGACCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp TACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGATGTGCTGGGTAGGCTaGGTGCTGGGCATTGGGTGG +
Preference number: 5 (lower is better)
Translates to: YSPALRLLAFNLHLLSHGMCWVG*VLGIGW
Trigger: CCACCCAATGCCCAGCACCAAGCCTACCCAGCACAT...CCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp CACACTTTCCTCTTCTTGACTGTACTGGCGCAGGTGCTTAAGATTTGGGGGAAGGAAATGCCCTTGCATTaGTCTTCTAAGGTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: HTFLFLTVLAQVLKIWGKEMPLH*SSKVGG
Trigger: CCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTC...CTTCCCCCAAATCTTAAGCACCTGCGCCAGTACAGTCAAGAAGAGGAAAGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp GGTGAAATGCCCTTGCATTTGTCTTCTAAGGTAGGAGGGCAGACACCATTGCCTGCTGATGCTCTATTTTaGTTATCCAACCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: GEMPLHLSSKVGGQTPLPADALF*LSNLLP
Trigger: GGGCAGGAGGTTGGATAACAAAAATAGAGCATCAGC...AGGCAATGGTGTCTGCCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp GGTGAAATGCCCTTGCATTTGTCTTCTAAGGTAGGAGGGCAGACACCATTGCCTGACACATCCAGGCATTaGGGCAAGAAACTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GEMPLHLSSKVGGQTPLPDTSRH*GKKLLP
Trigger: AGGAAGAAGTTTCTTGCCCAAATGCCTGGATGTGTC...AGGCAATGGTGTCTGCCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp GGTGAAATGCCCTTGCATTTGTCTTCTAAGGTAGGAGGGCAGACACCATTGCCTCAAATCTTCTTGCCTTaGAATTGGCCAGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GEMPLHLSSKVGGQTPLPQIFLP*NWPGWL
Trigger: CAACCAGCCTGGCCAATTCAAAGGCAAGAAGATTTG...AGGCAATGGTGTCTGCCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp GGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATGAGGCTGGGCTGGTTTaGCCTCGGACTCGATGCTAC +
Preference number: 5 (lower is better)
Translates to: GPQNLYSPALRLLAFNLHEAGLV*PRTRCY
Trigger: GTAGCATCGAGTCCGAGGCAAAACCAGCCCAGCCTC...ATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CAA 90 bp TTTCATAGGTCACTGAATGCATCCTTTGGTGCACAGACCAGAAATGACTGTGAAAATTGGCCAGGCTGGTaGGTCTCCACTCAGTCATGG +
Preference number: 5 (lower is better)
Translates to: FHRSLNASFGAQTRNDCENWPGW*VSTQSW
Trigger: CCATGACTGAGTGGAGACCAACCAGCCTGGCCAATT...TTCACAGTCATTTCTGGTCTGTGCACCAAAGGATGCATTCAGTGACCTATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp CCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCCCCCCTCAAATCTTCTaGCCTTTGAATTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PKWGPQNLYSPALRLLAFPPQIF*PLNWPG
Trigger: GCCTGGCCAATTCAAAGGCAAGAAGATTTGAGGGGG...GAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS CCA 90 bp GCATTTGGGCAAGAAACTTCTTCCAGCCATGTACGTGAAATTGCTTaGGAACCTGAACTCCCGCTGGAATTTCTTAGCCAAAACCTAGTC +
Preference number: 5 (lower is better)
Translates to: AFGQETSSSHVREIA*EPELPLEFLSQNLV
Trigger: GACTAGGTTTTGGCTAAGAAATTCCAGCGGGAGTTCAGGTTCCCAAGCAATTTCACGTACATGGCTGGAAGAAGTTTCTTGCCCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507481.2
CDS-3UTR CAA 90 bp AGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGGACAGACGGGAAGACATCCATaGGAAGGCATCCTTCCATCC +
Preference number: 5 (lower is better)
Translates to: SFKTPSIQSTFTLPWVGQTGRHP*EGILPS
Trigger: GGATGGAAGGATGCCTTCCAATGGATGTCTTCCCGT...CTGTCCTACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS-3UTR CAA 90 bp GGTATCTGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACGAAATGCCCTTGCATTaGTCTTCTAAGGTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GIWPLLWDSNCDISLRTHEMPLH*SSKVGG
Trigger: CCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTC...GTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCAGATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp AAGTCAAGCAGACACATCCAGGCATTTGGGCAAGAAACTTCTTCCAGCCATGTAGACACATCCAGGCATTaGGGCAAGAAACTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: KSSRHIQAFGQETSSSHVDTSRH*GKKLLP
Trigger: TGGAAGAAGTTTCTTGCCCAAATGCCTGGATGTGTC...TACATGGCTGGAAGAAGTTTCTTGCCCAAATGCCTGGATGTGTCTGCTTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507481.2
CDS GCA 90 bp TCTGCACACCAAGGCCTTTCTCATAGCAAATTCCAAGGTGGTACCTaGTCTGTGAGTCCTAAGGAGAAAATGGACAGACAAACAGATACA +
Preference number: 5 (lower is better)
Translates to: SAHQGLSHSKFQGGT*SVSPKEKMDRQTDT
Trigger: TGTATCTGTTTGTCTGTCCATTTTCTCCTTAGGACTCACAGAGCAGGTACCACCTTGGAATTTGCTATGAGAAAGGCCTTGGTGTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509110.1
CDS-3UTR CAA 90 bp GGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATCTCTGTGAGTCCCCATaGTTGGCTGCAAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: GPQNLYSPALRLLAFNLHLCESP*LAASQR
Trigger: TCTTTGGCTTGCAGCCAACAATGGGGACTCACAGAG...ATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp CTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTAGAAATGCCCTTGCATTaGTCTTCTAAGGTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LSSFKTPSIQSTFTLPWVEMPLH*SSKVGG
Trigger: CCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTC...TACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp GGTATCTGGCCTCTTCTTTGGGACTCAAATTGTGATATCTCTCTGAGAACCCACTGTGGTGAAATGCCCTaGCATTTGTCTTCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: GIWPLLWDSNCDISLRTHCGEMP*HLSSKV
Trigger: TACCTTAGAAGACAAATGCAAGGGCATTTCACCACA...GTGGGTTCTCAGAGAGATATCACAATTTGAGTCCCAAAGAAGAGGCCAGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp GGTGAAATGCCCTTGCATTTGTCTTCTAAGGTAGGAGGGCAGACACCATTGCCTTGCTTTCACATAAAATaGCAGTATGAACTGATGGAC +
Preference number: 5 (lower is better)
Translates to: GEMPLHLSSKVGGQTPLPCFHIK*QYELMD
Trigger: GTCCATCAGTTCATACTGCAATTTTATGTGAAAGCA...AGGCAATGGTGTCTGCCCTCCTACCTTAGAAGACAAATGCAAGGGCATTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp GCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCTTAAAACCCTGAGCTaGAAACCTCAGGTTTCCTAC +
Preference number: 5 (lower is better)
Translates to: AHVSQMGTSKSILSSFKTLKTLS*KPQVSY
Trigger: GTAGGAAACCTGAGGTTTCAAGCTCAGGGTTTTAAG...AGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp CTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATGGGTACTTTGGCACCCCAAATaGAATCAGTACTTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: LSSFKTPSIQSTFTLPWVLWHPK*NQYLAQ
Trigger: CTGAGCTAAGTACTGATTCAATTTGGGGTGCCAAAG...TACCCATGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp TCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCCCATCCTACCCCCAACCTTaGGCACCCCAAATTGAATCA +
Preference number: 5 (lower is better)
Translates to: SILSSFKTPSIQSTFTLPSYPQP*APQIES
Trigger: TGATTCAATTTGGGGTGCCAAAGGTTGGGGGTAGGA...TGGGAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432126.7
CDS-3UTR CAA 90 bp TCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTTGTGGTGAAATGCCCTaGCATTTGTCTTCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: SQMGTSKSILSSFKTPSICGEMP*HLSSKV
Trigger: TACCTTAGAAGACAAATGCAAGGGCATTTCACCACA...AATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp ATTTCTGGCACATGTTTCCCAAATGGGGACCTCAAAATCTATACTCTCCAGCTTTGCTTTCACATAAAATaGCAGTATGAACTGATGGAC +
Preference number: 5 (lower is better)
Translates to: ISGTCFPNGDLKIYTLQLCFHIK*QYELMD
Trigger: GTCCATCAGTTCATACTGCAATTTTATGTGAAAGCA...AAGCTGGAGAGTATAGATTTTGAGGTCCCCATTTGGGAAACATGTGCCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS-3UTR CAA 90 bp AAATCTATACTCTCCAGCTTTAAGACTCCTAGCATTCAATCTACATTTACTCTCTGCTTTCACATAAAATaGCAGTATGAACTGATGGAC +
Preference number: 5 (lower is better)
Translates to: KSILSSFKTPSIQSTFTLCFHIK*QYELMD
Trigger: GTCCATCAGTTCATACTGCAATTTTATGTGAAAGCA...GAGAGTAAATGTAGATTGAATGCTAGGAGTCTTAAAGCTGGAGAGTATAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
CDS GCA 72 bp CTCGGCCCAGGAGTCCCGGGAGGCGCCACATGTCGCTaGCAGCACCACAGAGAGCTCGCAGCCGAAAGCGCG +
Preference number: 6 (lower is better)
Translates to: LGPGVPGGATCR*QHHRELAAESA
Trigger: CGCGCTTTCGGCTGCGAGCTCTCTGTGGTGCTGGCAGCGACATGTGGCGCCTCCCGGGACTCCTGGGCCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000194118.8
ENST00000432126.7
CDS CAA 72 bp ACAGAGAGCTCGCAGCCGAAAGCGCGAGACCAACCCTaGGGACAGCGGCTAGAAAGGCCGCCGCGATGCCCC +
Preference number: 6 (lower is better)
Translates to: TESSQPKARDQP*GQRLERPPRCP
Trigger: GGGGCATCGCGGCGGCCTTTCTAGCCGCTGTCCCAAGGGTTGGTCTCGCGCTTTCGGCTGCGAGCTCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000194118.8
CDS GCA 72 bp GCAGTGTTCTACCCGCTGAGGTCCTGCTGGCAGGGATaGCTGGAAGTGGATCTGCCTTGCCAGCTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: AVFYPLRSCWQG*LEVDLPCQLQG
Trigger: GCCCTGCAGCTGGCAAGGCAGATCCACTTCCAGGCATCCCTGCCAGCAGGACCTCAGCGGGTAGAACACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS CCA 72 bp GGTTCCACGAAGAGGCTGGGTCTCGTAGTAGGCACCTaGCATAGCGGTACTGAGCCAGGCTGTGGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: GSTKRLGLVVGT*HSGTEPGCGPG
Trigger: GCCAGGGCCACAGCCTGGCTCAGTACCGCTATGCCAGGTGCCTACTACGAGACCCAGCCTCTTCGTGGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000502729.1
ENST00000507481.2
CDS CAA 90 bp CACGGGAAGACATCCATTGGAAGGCATCCTTCCATCCATGGGACCTaGGACCCCCGCTCGTGCCTGGGCCATGGGGACCTGACCTGTCGA +
Preference number: 6 (lower is better)
Translates to: HGKTSIGRHPSIHGT*DPRSCLGHGDLTCR
Trigger: TCGACAGGTCAGGTCCCCATGGCCCAGGCACGAGCGGGGGTCCAAGGTCCCATGGATGGAAGGATGCCTTCCAATGGATGTCTTCCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS GCA 72 bp TGGAGGCTTCCAGGCTGGCTCCGAGATGCCCACTTCTaGAGAGGAGGCCAAGGTTGCCTGTGCTCGAGGCAT +
Preference number: 6 (lower is better)
Translates to: WRLPGWLRDAHF*RGGQGCLCSRH
Trigger: ATGCCTCGAGCACAGGCAACCTTGGCCTCCTCTGCAGAAGTGGGCATCTCGGAGCCAGCCTGGAAGCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
ENST00000509110.1
CDS GCA 72 bp ATAGCCCTGCTGGAGGCTTCCAGGCTGGCTCCGAGATaGCCACTTCTGCAGAGGAGGCCAAGGTTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: IALLEASRLAPR*PLLQRRPRLPV
Trigger: CACAGGCAACCTTGGCCTCCTCTGCAGAAGTGGGCATCTCGGAGCCAGCCTGGAAGCCTCCAGCAGGGCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
ENST00000509110.1
CDS CCA 72 bp CGGGAAGACATCCATTGGAAGGCATCCTTCCATCCATaGGACCTTGGACCCCCGCTCGTGCCTGGGCCATGG +
Preference number: 6 (lower is better)
Translates to: REDIHWKASFHP*DLGPPLVPGPW
Trigger: CCATGGCCCAGGCACGAGCGGGGGTCCAAGGTCCCATGGATGGAAGGATGCCTTCCAATGGATGTCTTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS CAA 72 bp ACATCCATTGGAAGGCATCCTTCCATCCATGGGACCTaGGACCCCCGCTCGTGCCTGGGCCATGGGGACCTG +
Preference number: 6 (lower is better)
Translates to: TSIGRHPSIHGT*DPRSCLGHGDL
Trigger: CAGGTCCCCATGGCCCAGGCACGAGCGGGGGTCCAAGGTCCCATGGATGGAAGGATGCCTTCCAATGGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS TCA 72 bp CAGCCTCTCCTGGGCGGCCTCATTTCCCAGAGCGGCTaGCTGCTGGTAACATCTCAAGGCCTCTCCCAGATT +
Preference number: 6 (lower is better)
Translates to: QPLLGGLISQSG*LLVTSQGLSQI
Trigger: AATCTGGGAGAGGCCTTGAGATGTTACCAGCAGTCAGCCGCTCTGGGAAATGAGGCCGCCCAGGAGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
ENST00000509110.1
CDS GCA 72 bp GATGCCCACTTCTGCAGAGGAGGCCAAGGTTGCCTGTaGTCGAGGCATGTGGTAGGCGTGAGGTTCCTGCTA +
Preference number: 6 (lower is better)
Translates to: DAHFCRGGQGCL*SRHVVGVRFLL
Trigger: TAGCAGGAACCTCACGCCTACCACATGCCTCGAGCACAGGCAACCTTGGCCTCCTCTGCAGAAGTGGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000507481.2
ENST00000509110.1
CDS GCA 72 bp TGGGCTGAGGCTGGGCTGGTTTTGCCTCGGACTCGATaGTACTACTGGCATGCAGGAAGCCAAAATCACCGG +
Preference number: 6 (lower is better)
Translates to: WAEAGLVLPRTR*YYWHAGSQNHR
Trigger: CCGGTGATTTTGGCTTCCTGCATGCCAGTAGTAGCATCGAGTCCGAGGCAAAACCAGCCCAGCCTCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS GCA 72 bp GCCCGCATTGTACTGCGCTTTGCTGTAGCCGCGGGCTaGAGCTTTCTGGAAGTAAGAAAAGGCTGCCGTGTG +
Preference number: 6 (lower is better)
Translates to: ARIVLRFAVAAG*SFLEVRKGCRV
Trigger: CACACGGCAGCCTTTTCTTACTTCCAGAAAGCTGCAGCCCGCGGCTACAGCAAAGCGCAGTACAATGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000502729.1
ENST00000506775.1
ENST00000508751.1
CDS TCA 72 bp TTAGGCACAGGAACCAGCAAAGTGGAGGAGGTAGTCTaGGGCCCATCTGGGCTGGTGGACTTAGGAGTCACC +
Preference number: 6 (lower is better)
Translates to: LGTGTSKVEEVV*GPSGLVDLGVT
Trigger: GGTGACTCCTAAGTCCACCAGCCCAGATGGGCCTCAGACTACCTCCTCCACTTTGCTGGTTCCTGTGCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS TCA 72 bp TCACAGCTCTCTGCTCATCCAGGTAGGGCTCCTTGGTaGAAAGCACCCCGAGGAAAGCTTGGGCCTCTCTCA +
Preference number: 6 (lower is better)
Translates to: SQLSAHPGRAPW*KAPRGKLGPLS
Trigger: TGAGAGAGGCCCAAGCTTTCCTCGGGGTGCTTTTCACCAAGGAGCCCTACCTGGATGAGCAGAGAGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000502729.1
ENST00000507481.2
CDS GCA 72 bp GCCGCGGGCTGCAGCTTTCTGGAAGTAAGAAAAGGCTaGCGTGTGGTCGCCACTCTTCATGTTCTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: AAGCSFLEVRKG*RVVATLHVLCS
Trigger: GGAACAGAGAACATGAAGAGTGGCGACCACACGGCAGCCTTTTCTTACTTCCAGAAAGCTGCAGCCCGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000502729.1
ENST00000506775.1
ENST00000508751.1
CDS CCA 72 bp CATAGGGTGTTCGGGGAGACACGGGAAGACATCCATTaGAAGGCATCCTTCCATCCATGGGACCTTGGACCC +
Preference number: 6 (lower is better)
Translates to: HRVFGETREDIH*KASFHPWDLGP
Trigger: GGGTCCAAGGTCCCATGGATGGAAGGATGCCTTCCAATGGATGTCTTCCCGTGTCTCCCCGAACACCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS CCA 72 bp GCTGGGCTGGTTTTGCCTCGGACTCGATGCTACTACTaGCATGCAGGAAGCCAAAATCACCGGGACCTTCCT +
Preference number: 6 (lower is better)
Translates to: AGLVLPRTRCYY*HAGSQNHRDLP
Trigger: AGGAAGGTCCCGGTGATTTTGGCTTCCTGCATGCCAGTAGTAGCATCGAGTCCGAGGCAAAACCAGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS TCA 72 bp CTACTGCAACTGCCCAACGGTCACACAGTAAGTCAGTaGGCGCTAAGGCTTGAAGCCAGGCCAAGGCTCCTA +
Preference number: 6 (lower is better)
Translates to: LLQLPNGHTVSQ*ALRLEARPRLL
Trigger: TAGGAGCCTTGGCCTGGCTTCAAGCCTTAGCGCTCACTGACTTACTGTGTGACCGTTGGGCAGTTGCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502729.1
CDS GCA 72 bp GCTGGTTTTGCCTCGGACTCGATGCTACTACTGGCATaGAGGAAGCCAAAATCACCGGGACCTTCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: AGFASDSMLLLA*RKPKSPGPSSE
Trigger: CTCTGAGGAAGGTCCCGGTGATTTTGGCTTCCTGCATGCCAGTAGTAGCATCGAGTCCGAGGCAAAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS GCA 72 bp CATGCTCATGACACAAGCCCGCATTGTACTGCGCTTTaGTGTAGCCGCGGGCTGCAGCTTTCTGGAAGTAAG +
Preference number: 6 (lower is better)
Translates to: HAHDTSPHCTAL*CSRGLQLSGSK
Trigger: CTTACTTCCAGAAAGCTGCAGCCCGCGGCTACAGCAAAGCGCAGTACAATGCGGGCTTGTGTCATGAGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000502729.1
ENST00000506775.1
ENST00000508751.1
CDS GCA 72 bp GCAGATTTTAAGCTGCCAACAGCTCTCACAGCCTGGTaGAAGCCAGCTCTGGCGTACTACTGCAACTGCCCA +
Preference number: 6 (lower is better)
Translates to: ADFKLPTALTAW*KPALAYYCNCP
Trigger: TGGGCAGTTGCAGTAGTACGCCAGAGCTGGCTTGCACCAGGCTGTGAGAGCTGTTGGCAGCTTAAAATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502729.1
CDS TCA 72 bp AAGCCAAAATCACCGGGACCTTCCTCAGAGGGGTCCTaGGGACGAGCTCCTCTCAAAGAGTTGTGTGAGAAG +
Preference number: 6 (lower is better)
Translates to: KPKSPGPSSEGS*GRAPLKELCEK
Trigger: CTTCTCACACAACTCTTTGAGAGGAGCTCGTCCTCAGGACCCCTCTGAGGAAGGTCCCGGTGATTTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS CAA 90 bp ATTTATCTTGTTCCTTTTCACCAGTGGGCTGAGGCTGGGCTGGTTTaGCCTCGGACTCGATGCTACTACTGGCATGCAGGAAGCCAAAAT +
Preference number: 6 (lower is better)
Translates to: IYLVPFHQWAEAGLV*PRTRCYYWHAGSQN
Trigger: ATTTTGGCTTCCTGCATGCCAGTAGTAGCATCGAGTCCGAGGCAAAACCAGCCCAGCCTCAGCCCACTGGTGAAAAGGAACAAGATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000194118.8
ENST00000432126.7
ENST00000508751.1
CDS CAA 90 bp AGGCTTCATCCCCAACATGCTTGTCCACTGAGATCGCATACCCCATaGTTGGCTGCAAGCCAAAGATATTTCACAGCTCTCTGCTCATCC +
Preference number: 6 (lower is better)
Translates to: RLHPQHACPLRSHTP*LAASQRYFTALCSS
Trigger: GGATGAGCAGAGAGCTGTGAAATATCTTTGGCTTGCAGCCAACAATGGGGTATGCGATCTCAGTGGACAAGCATGTTGGGGATGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502729.1
CDS CAA 72 bp AATCCCTTCTCTTATCAGGCTTCATCCCCAACATGCTaGTCCACTGAGATCGCATACCCCATTGTTGGCTGC +
Preference number: 6 (lower is better)
Translates to: NPFSYQASSPTC*STEIAYPIVGC
Trigger: GCAGCCAACAATGGGGTATGCGATCTCAGTGGACAAGCATGTTGGGGATGAAGCCTGATAAGAGAAGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502729.1
CDS CAA 72 bp CAACATGCTTGTCCACTGAGATCGCATACCCCATTGTaGGCTGCAAGCCAAAGATATTTCACAGCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: QHACPLRSHTPL*AASQRYFTALC
Trigger: GCAGAGAGCTGTGAAATATCTTTGGCTTGCAGCCAACAATGGGGTATGCGATCTCAGTGGACAAGCATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502729.1
CDS CCA 72 bp CAAGAAACTTCTTCCAGCCATGTACGTGAAATTGCTTaGGAACCTGAACTCCCGCTGGAATTTCTTAGCCAA +
Preference number: 6 (lower is better)
Translates to: QETSSSHVREIA*EPELPLEFLSQ
Trigger: TTGGCTAAGAAATTCCAGCGGGAGTTCAGGTTCCCAAGCAATTTCACGTACATGGCTGGAAGAAGTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507481.2
CDS TCA 72 bp AGTTGCAAAGAAGAAAGGCAAAATCCCTGCCCTCCCTaGATTTTGAGTCTAAATTCCTGGAAGTTAGGAGCT +
Preference number: 6 (lower is better)
Translates to: SCKEERQNPCPP*ILSLNSWKLGA
Trigger: AGCTCCTAACTTCCAGGAATTTAGACTCAAAATTCAGGGAGGGCAGGGATTTTGCCTTTCTTCTTTGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506775.1
CDS CAA 72 bp CATTATTATTCTGATTTTAAAGACGAGGAAACAGGTTaGAATCAAGAAGTGACCAGGCCCAGTAGTGTGCTG +
Preference number: 6 (lower is better)
Translates to: HYYSDFKDEETG*NQEVTRPSSVL
Trigger: CAGCACACTACTGGGCCTGGTCACTTCTTGATTCAAACCTGTTTCCTCGTCTTTAAAATCAGAATAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502729.1