Pregenerated sensors for DEFB136 (Homo sapiens)
Ensembl gene IDs: ENSG00000205884Ensembl transcript IDs: ENST00000382209.2, ENST00000646795.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACAGCAAGACAGAATATTGTGGCAGAACGCAATCCACCTGTATCCTaGCGGACACCCGAAGAAACATACGGCTTTCTGGCTAGTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: TARQNIVAERNPPVS*RTPEETYGFLASAG Trigger: ACCTGCACTAGCCAGAAAGCCGTATGTTTCTTCGGGTGTCCGCCAGGATACAGGTGGATTGCGTTCTGCCACAATATTCTGTCTTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382209.2 ENST00000646795.1 |
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| CDS CCA 90 bp | ATCCACCTGTATCCTGGCGGACACCCGAAGAAACATACGGCTTTCTaGCTAGTGCAGGTGCGAACTTTGACTCCATCATTCCCAAACATA | + |
|
Preference number: 5 (lower is better) Translates to: IHLYPGGHPKKHTAF*LVQVRTLTPSFPNI Trigger: TATGTTTGGGAATGATGGAGTCAAAGTTCGCACCTGCACTAGCCAGAAAGCCGTATGTTTCTTCGGGTGTCCGCCAGGATACAGGTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382209.2 ENST00000646795.1 |
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| CDS CCA 72 bp | TATCCTGGCGGACACCCGAAGAAACATACGGCTTTCTaGCTAGTGCAGGTGCGAACTTTGACTCCATCATTC | + |
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Preference number: 6 (lower is better) Translates to: YPGGHPKKHTAF*LVQVRTLTPSF Trigger: GAATGATGGAGTCAAAGTTCGCACCTGCACTAGCCAGAAAGCCGTATGTTTCTTCGGGTGTCCGCCAGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382209.2 ENST00000646795.1 |
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| CDS CCA 72 bp | CAGAATATTGTGGCAGAACGCAATCCACCTGTATCCTaGCGGACACCCGAAGAAACATACGGCTTTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: QNIVAERNPPVS*RTPEETYGFLA Trigger: AGCCAGAAAGCCGTATGTTTCTTCGGGTGTCCGCCAGGATACAGGTGGATTGCGTTCTGCCACAATATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382209.2 ENST00000646795.1 |
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| CDS CCA 72 bp | AAACGTGTCATATTTTTACAGCAAGACAGAATATTGTaGCAGAACGCAATCCACCTGTATCCTGGCGGACAC | + |
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Preference number: 6 (lower is better) Translates to: KRVIFLQQDRIL*QNAIHLYPGGH Trigger: GTGTCCGCCAGGATACAGGTGGATTGCGTTCTGCCACAATATTCTGTCTTGCTGTAAAAATATGACACGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000382209.2 ENST00000646795.1 |
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