Pregenerated sensors for DEFB125 (Homo sapiens)
Ensembl gene IDs: ENSG00000178591Ensembl transcript IDs: ENST00000382410.3, ENST00000608838.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGTCCATCCCCATGGTCATCCAATCCCTGATGGAATTTTCCTGGTaGAATTGGATTGGTAGAATCAGCTCTTTGGATATTATTTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: MSIPMVIQSLMEFSW*NWIGRISSLDIISS Trigger: GCTGGAAATAATATCCAAAGAGCTGATTCTACCAATCCAATTTCACCAGGAAAATTCCATCAGGGATTGGATGACCATGGGGATGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| 3UTR TCA 90 bp | GCAAGTCCCACTTTTATCTCTATCCAGTTAGATCAGTGCTTGTGTTaGATGAAAGAATTAGCTTCTGACTCTGTTAGTTACCAGCTAGAA | + |
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Preference number: 1 (lower is better) Translates to: ASPTFISIQLDQCLC*MKELASDSVSYQLE Trigger: TTCTAGCTGGTAACTAACAGAGTCAGAAGCTAATTCTTTCATTCAACACAAGCACTGATCTAACTGGATAGAGATAAAAGTGGGACTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| 3UTR CAA 90 bp | TGTCTACACATTTCTAATTGTAAGGCAACTCTCTTGGCTGTTGTGTaGGTAGTAGCAATTATGTCCATCCCCATGGTCATCCAATCCCTG | + |
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Preference number: 2 (lower is better) Translates to: CLHISNCKATLLAVV*VVAIMSIPMVIQSL Trigger: CAGGGATTGGATGACCATGGGGATGGACATAATTGCTACTACCAACACAACAGCCAAGAGAGTTGCCTTACAATTAGAAATGTGTAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| 3UTR-3UTR TCA 90 bp | GTAAAAATTCTTGTCTTAGTCATAAGAGGCAGCTCCAAACAATGGTCTTCGTTTTGGTCATCCAATCCCTaGTGGAATTTTCCTGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VKILVLVIRGSSKQWSSFWSSNP*WNFPGE Trigger: TTCACCAGGAAAATTCCATCAGGGATTGGATGACCA...AAACGAAGACCATTGTTTGGAGCTGCCTCTTATGACTAAGACAAGAATTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| 3UTR-3UTR TCA 90 bp | CACATTTCTAATTGTAAGGCAACTCTCTTGGCTGTTGTGTTGGTAGTAGCAATTATGGAATTTTCCTGGTaGAATTGGATTGGTAGAATC | + |
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Preference number: 2 (lower is better) Translates to: HISNCKATLLAVVLVVAIMEFSW*NWIGRI Trigger: GATTCTACCAATCCAATTTCACCAGGAAAATTCCAT...AATTGCTACTACCAACACAACAGCCAAGAGAGTTGCCTTACAATTAGAAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| 3UTR-3UTR CAA 90 bp | GGCTGTTGTGTTGGTAGTAGCAATTATGTCCATCCCCATGGTCATCCAATCCCTCCTGGTGAAATTGGATaGGTAGAATCAGCTCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: GCCVGSSNYVHPHGHPIPPGEIG*VESALW Trigger: CCAAAGAGCTGATTCTACCAATCCAATTTCACCAGG...AGGGATTGGATGACCATGGGGATGGACATAATTGCTACTACCAACACAACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| 3UTR TCA 72 bp | CCCATGGTCATCCAATCCCTGATGGAATTTTCCTGGTaGAATTGGATTGGTAGAATCAGCTCTTTGGATATT | + |
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Preference number: 3 (lower is better) Translates to: PMVIQSLMEFSW*NWIGRISSLDI Trigger: AATATCCAAAGAGCTGATTCTACCAATCCAATTTCACCAGGAAAATTCCATCAGGGATTGGATGACCATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTCCTATATACGATAGTAGTGGGCCAGGCACTGTTAAAGTAAAAATTCTTCTCTTGGCTGTTGTGTaGGTAGTAGCAATTATGTCC | + |
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Preference number: 3 (lower is better) Translates to: CSPIYDSSGPGTVKVKILLLAVV*VVAIMS Trigger: GGACATAATTGCTACTACCAACACAACAGCCAAGAG...AAGAATTTTTACTTTAACAGTGCCTGGCCCACTACTATCGTATATAGGAGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| 3UTR TCA 72 bp | ACTTTTATCTCTATCCAGTTAGATCAGTGCTTGTGTTaGATGAAAGAATTAGCTTCTGACTCTGTTAGTTAC | + |
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Preference number: 3 (lower is better) Translates to: TFISIQLDQCLC*MKELASDSVSY Trigger: GTAACTAACAGAGTCAGAAGCTAATTCTTTCATTCAACACAAGCACTGATCTAACTGGATAGAGATAAAAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CCA 90 bp | CTTGGCTGTTGTGTTGGTAGTAGCAATTATGTCCATCCCCATGGTCATCCAATCTGTCTGAGAAGGTGGTaGCATAGTCTCGGAAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LGCCVGSSNYVHPHGHPICLRRW*HSLGSS Trigger: GCTACTTCCGAGACTATGCCACCACCTTCTCAGACA...GATTGGATGACCATGGGGATGGACATAATTGCTACTACCAACACAACAGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR TCA 90 bp | TCTCTTGGCTGTTGTGTTGGTAGTAGCAATTATGTCCATCCCCATGGTCATCCATGGTCATCCAATCCCTaGTGGAATTTTCCTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: SLGCCVGSSNYVHPHGHPWSSNP*WNFPGE Trigger: TTCACCAGGAAAATTCCATCAGGGATTGGATGACCA...TGGATGACCATGGGGATGGACATAATTGCTACTACCAACACAACAGCCAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR TCA 90 bp | GGTAGTAGCAATTATGTCCATCCCCATGGTCATCCAATCCCTGATGGAATTTTCGTTATATCCTCTAGGTaGATCACAGGAAATGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GSSNYVHPHGHPIPDGIFVISSR*ITGNAG Trigger: ACCAGCATTTCCTGTGATTCACCTAGAGGATATAAC...GAAAATTCCATCAGGGATTGGATGACCATGGGGATGGACATAATTGCTACTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CCA 90 bp | CTTGGCTGTTGTGTTGGTAGTAGCAATTATGTCCATCCCCATGGTCATCCAATCAATCACAGGAAATGCTaGTCGTCGAGTATATTCATG | + |
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Preference number: 4 (lower is better) Translates to: LGCCVGSSNYVHPHGHPINHRKC*SSSIFM Trigger: CATGAATATACTCGACGACCAGCATTTCCTGTGATT...GATTGGATGACCATGGGGATGGACATAATTGCTACTACCAACACAACAGCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CCA 90 bp | GTAAAAATTCTTGTCTTAGTCATAAGAGGCAGCTCCAAACAATGGTCTTCGTTTGATATTCATGGCTCCTaGGAGAGAGGAAGCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VKILVLVIRGSSKQWSSFDIHGS*ERGSSV Trigger: CACAGAGCTTCCTCTCTCCCAGGAGCCATGAATATC...AAACGAAGACCATTGTTTGGAGCTGCCTCTTATGACTAAGACAAGAATTTTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CCA 90 bp | CCTATATACGATAGTAGTGGGCCAGGCACTGTTAAAGTAAAAATTCTTGTCTTAGCATCAGGATATTCATaGCTCCTGGGAGAGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PIYDSSGPGTVKVKILVLASGYS*LLGERK Trigger: CTTCCTCTCTCCCAGGAGCCATGAATATCCTGATGC...TAAGACAAGAATTTTTACTTTAACAGTGCCTGGCCCACTACTATCGTATATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTGGCTGTTGTGTTGGTAGTAGCAATTATGTCCATCCCCATGGTCATCCATTCTTCCAACATTTTTaGGGTTCAAAGCTACCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SLGCCVGSSNYVHPHGHPFFQHF*GSKLPL Trigger: CAAAGGTAGCTTTGAACCCCAAAAATGTTGGAAGAA...TGGATGACCATGGGGATGGACATAATTGCTACTACCAACACAACAGCCAAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CCA 90 bp | CCTATATACGATAGTAGTGGGCCAGGCACTGTTAAAGTAAAAATTCTTGTCTTAAGCTGTCTGAGAAGGTaGTGGCATAGTCTCGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PIYDSSGPGTVKVKILVLSCLRR*WHSLGS Trigger: ACTTCCGAGACTATGCCACCACCTTCTCAGACAGCT...TAAGACAAGAATTTTTACTTTAACAGTGCCTGGCCCACTACTATCGTATATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| 3UTR CAA 72 bp | ATTTCTAATTGTAAGGCAACTCTCTTGGCTGTTGTGTaGGTAGTAGCAATTATGTCCATCCCCATGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: ISNCKATLLAVV*VVAIMSIPMVI Trigger: GATGACCATGGGGATGGACATAATTGCTACTACCAACACAACAGCCAAGAGAGTTGCCTTACAATTAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR TCA 90 bp | GGTAGTAGCAATTATGTCCATCCCCATGGTCATCCAATCCCTGATGGAATTTTCGATCAGTGCTTGTGTTaGATGAAAGAATTAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GSSNYVHPHGHPIPDGIFDQCLC*MKELAS Trigger: AGAAGCTAATTCTTTCATTCAACACAAGCACTGATC...GAAAATTCCATCAGGGATTGGATGACCATGGGGATGGACATAATTGCTACTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CCA 90 bp | CCTATATACGATAGTAGTGGGCCAGGCACTGTTAAAGTAAAAATTCTTGTCTTAGTTCAAAGCTACCTTTaGTCACCCGAGTTAGCAACC | + |
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Preference number: 4 (lower is better) Translates to: PIYDSSGPGTVKVKILVLVQSYL*SPELAT Trigger: GGTTGCTAACTCGGGTGACCAAAGGTAGCTTTGAAC...TAAGACAAGAATTTTTACTTTAACAGTGCCTGGCCCACTACTATCGTATATAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR GCA 90 bp | CCTGGTGAAATTGGATTGGTAGAATCAGCTCTTTGGATATTATTTCCAGCAGTAGTGAATCACAGGAAATaGTGGTCGTCGAGTATATTC | + |
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Preference number: 4 (lower is better) Translates to: PGEIGLVESALWILFPAVVNHRK*WSSSIF Trigger: GAATATACTCGACGACCAGCATTTCCTGTGATTCAC...TACTGCTGGAAATAATATCCAAAGAGCTGATTCTACCAATCCAATTTCACCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| 3UTR CAA 72 bp | TTCTGTCTACACATTTCTAATTGTAAGGCAACTCTCTaGGCTGTTGTGTTGGTAGTAGCAATTATGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: FCLHISNCKATL*AVVLVVAIMSI Trigger: GATGGACATAATTGCTACTACCAACACAACAGCCAAGAGAGTTGCCTTACAATTAGAAATGTGTAGACAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CCA 90 bp | TGTTCTCCTATATACGATAGTAGTGGGCCAGGCACTGTTAAAGTAAAAATTCTTATTCAACATAGATACTaGGGAACCAGTAAAAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: CSPIYDSSGPGTVKVKILIQHRY*GTSKRV Trigger: GACTCTTTTACTGGTTCCCCAGTATCTATGTTGAAT...AAGAATTTTTACTTTAACAGTGCCTGGCCCACTACTATCGTATATAGGAGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CAA 90 bp | TCTCTTGGCTGTTGTGTTGGTAGTAGCAATTATGTCCATCCCCATGGTCATCCACCTGGTGAAATTGGATaGGTAGAATCAGCTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: SLGCCVGSSNYVHPHGHPPGEIG*VESALW Trigger: CCAAAGAGCTGATTCTACCAATCCAATTTCACCAGG...TGGATGACCATGGGGATGGACATAATTGCTACTACCAACACAACAGCCAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CAA 90 bp | CACATTTCTAATTGTAAGGCAACTCTCTTGGCTGTTGTGTTGGTAGTAGCAATTGGTTCAAAGCTACCTTaGGTCACCCGAGTTAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: HISNCKATLLAVVLVVAIGSKLP*VTRVSN Trigger: GTTGCTAACTCGGGTGACCAAAGGTAGCTTTGAACC...AATTGCTACTACCAACACAACAGCCAAGAGAGTTGCCTTACAATTAGAAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CAA 90 bp | CTTGGCTGTTGTGTTGGTAGTAGCAATTATGTCCATCCCCATGGTCATCCAATCATTCTTCCAACATTTTaGGGGTTCAAAGCTACCTTT | + |
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Preference number: 5 (lower is better) Translates to: LGCCVGSSNYVHPHGHPIILPTF*GFKATF Trigger: AAAGGTAGCTTTGAACCCCAAAAATGTTGGAAGAAT...GATTGGATGACCATGGGGATGGACATAATTGCTACTACCAACACAACAGCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CAA 90 bp | CTATATGCTTTTATATGTTCTCCTATATACGATAGTAGTGGGCCAGGCACTGTTGTAGTCTCAGGAGTATaGGTCTCAGGTGTCATGGTT | + |
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Preference number: 5 (lower is better) Translates to: LYAFICSPIYDSSGPGTVVVSGV*VSGVMV Trigger: AACCATGACACCTGAGACCAATACTCCTGAGACTAC...AACAGTGCCTGGCCCACTACTATCGTATATAGGAGAACATATAAAAGCATATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CAA 90 bp | CACATTTCTAATTGTAAGGCAACTCTCTTGGCTGTTGTGTTGGTAGTAGCAATTCTCTTGGCTGTTGTGTaGGTAGTAGCAATTATGTCC | + |
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Preference number: 5 (lower is better) Translates to: HISNCKATLLAVVLVVAILLAVV*VVAIMS Trigger: GGACATAATTGCTACTACCAACACAACAGCCAAGAG...AATTGCTACTACCAACACAACAGCCAAGAGAGTTGCCTTACAATTAGAAATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CAA 90 bp | CCTATATACGATAGTAGTGGGCCAGGCACTGTTAAAGTAAAAATTCTTGTCTTATGTAAGGCAACTCTCTaGGCTGTTGTGTTGGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: PIYDSSGPGTVKVKILVLCKATL*AVVLVV Trigger: TACTACCAACACAACAGCCAAGAGAGTTGCCTTACA...TAAGACAAGAATTTTTACTTTAACAGTGCCTGGCCCACTACTATCGTATATAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CAA 90 bp | GTAAAAATTCTTGTCTTAGTCATAAGAGGCAGCTCCAAACAATGGTCTTCGTTTATGCAGCATGATAGCTaGTTCCTACAAAGAAGTATG | + |
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Preference number: 5 (lower is better) Translates to: VKILVLVIRGSSKQWSSFMQHDS*FLQRSM Trigger: CATACTTCTTTGTAGGAACAAGCTATCATGCTGCAT...AAACGAAGACCATTGTTTGGAGCTGCCTCTTATGACTAAGACAAGAATTTTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS-3UTR CAA 90 bp | CACATTTCTAATTGTAAGGCAACTCTCTTGGCTGTTGTGTTGGTAGTAGCAATTAGATCAGTGCTTGTGTaGAATGAAAGAATTAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: HISNCKATLLAVVLVVAIRSVLV*NERISF Trigger: GAAGCTAATTCTTTCATTCAACACAAGCACTGATCT...AATTGCTACTACCAACACAACAGCCAAGAGAGTTGCCTTACAATTAGAAATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382410.3 |
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| CDS CAA 90 bp | TCGGGAGTAGTGGCCTCAGATGGTGGCATAGTAGTCTCAGGAGTATaGGTCTCAGGTGTCATGGTTTCTCCAAATTTAGTTGTGTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SGVVASDGGIVVSGV*VSGVMVSPNLVVSN Trigger: ATTTGACACAACTAAATTTGGAGAAACCATGACACCTGAGACCAATACTCCTGAGACTACTATGCCACCATCTGAGGCCACTACTCCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382410.3 ENST00000608838.1 |
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| CDS CCA 72 bp | TGTGTCAAATGTTATCAGATCATTCAACATAGATACTaGGGAACCAGTAAAAGAGTCCACATCACTATAATC | + |
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Preference number: 6 (lower is better) Translates to: CVKCYQIIQHRY*GTSKRVHITII Trigger: GATTATAGTGATGTGGACTCTTTTACTGGTTCCCCAGTATCTATGTTGAATGATCTGATAACATTTGACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000382410.3 ENST00000608838.1 |
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