Pregenerated sensors for DEFB123 (Homo sapiens)
Ensembl gene IDs: ENSG00000180424Ensembl transcript IDs: ENST00000376309.4
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCAGTCCAGCATCTTTGGGTaGCACCTGGAGTCAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GNPLGASSAFSWLQASKQSSIFG*HLESAG Trigger: CCCAGCTGACTCCAGGTGGCACCCAAAGATGCTGGA...CTGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR TCA 90 bp | TGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCAGTCCGATGCCACGGCTaGGCTAATGGGAGAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: WESTGSFICIFMASGFKAVRCHG*ANGRRR Trigger: TCTCCTTCTCCCATTAGCTCAGCCGTGGCATCGGAC...TGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CCA 90 bp | GTGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCCCACCTGGAGTCAGCTaGGATAAGAGCAGCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: VGIHWELHLHFHGFRLQSPPGVS*DKSSST Trigger: TGTGCTGCTGCTCTTATCCCAGCTGACTCCAGGTGG...GCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CCA 90 bp | TGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCAAGATTCCAGCATCTTTaGGTGCCACCTGGAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: WESTGSFICIFMASGFKARFQHL*VPPGVS Trigger: GCTGACTCCAGGTGGCACCCAAAGATGCTGGAATCT...TGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CCA 90 bp | GTGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCCCACCACCTTTCTTTTaGCTGGTACTTGGGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGIHWELHLHFHGFRLQSPPPFF*LVLGLH Trigger: GTGAAGCCCAAGTACCAGCCAAAAGAAAGGTGGTGG...GCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR GCA 90 bp | GTGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCACTGGGAGCTTCATCTaGATTTTCATGGCTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VGIHWELHLHFHGFRLQSTGSFI*IFMASG Trigger: GCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGT...GCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CCA 90 bp | GGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCAGGCAAAAGGAGCTTCATaGCTAAGGCAGCCCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: GNPLGASSAFSWLQASKQAKGAS*LRQPKM Trigger: CATTTTGGGCTGCCTTAGCCATGAAGCTCCTTTTGC...CTGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CCA 90 bp | TGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCACACCTTTCTTTTGGCTaGTACTTGGGCTTCACGCAG | + |
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Preference number: 4 (lower is better) Translates to: WESTGSFICIFMASGFKAHLSFG*YLGFTQ Trigger: CTGCGTGAAGCCCAAGTACCAGCCAAAAGAAAGGTG...TGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CCA 90 bp | TGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCACTTTTGGCTGGTACTTaGGCTTCACGCAGCACATTT | + |
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Preference number: 4 (lower is better) Translates to: WESTGSFICIFMASGFKALLAGT*ASRSTF Trigger: AAATGTGCTGCGTGAAGCCCAAGTACCAGCCAAAAG...TGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CCA 90 bp | TGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCAAGTGTGGGAATCCACTaGGAGCTTCATCTGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: WESTGSFICIFMASGFKASVGIH*ELHLHF Trigger: AAAATGCAGATGAAGCTCCCAGTGGATTCCCACACT...TGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CCA 90 bp | GTGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCTTTATTGATAGAGTGTaGGAATCCACTGGGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VGIHWELHLHFHGFRLQSFIDRV*ESTGSF Trigger: GAAGCTCCCAGTGGATTCCCACACTCTATCAATAAA...GCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CCA 90 bp | TGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCATCATCTGCATTTTCATaGCTTCAGGCTTCAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: WESTGSFICIFMASGFKASSAFS*LQASKQ Trigger: CTGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGA...TGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR GCA 90 bp | TGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCAATCTGTAACGGCATTTaGCATAAAGATTCCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: WESTGSFICIFMASGFKAICNGI*HKDSSI Trigger: GATGCTGGAATCTTTATGGCAAATGCCGTTACAGAT...TGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CAA 90 bp | GGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCAGAAGATTCCAGCATCTTaGGGTGCCACCTGGAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: GNPLGASSAFSWLQASKQKIPAS*GATWSQ Trigger: CTGACTCCAGGTGGCACCCAAAGATGCTGGAATCTT...CTGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CAA 90 bp | GTGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCTCTTTTGGCTGGTACTaGGGCTTCACGCAGCACATT | + |
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Preference number: 5 (lower is better) Translates to: VGIHWELHLHFHGFRLQSSFGWY*GFTQHI Trigger: AATGTGCTGCGTGAAGCCCAAGTACCAGCCAAAAGA...GCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CAA 90 bp | TGGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCAGCCACCACCTTTCTTTaGGCTGGTACTTGGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: WESTGSFICIFMASGFKAATTFL*AGTWAS Trigger: TGAAGCCCAAGTACCAGCCAAAAGAAAGGTGGTGGC...TGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS-3UTR CAA 90 bp | GGGAATCCACTGGGAGCTTCATCTGCATTTTCATGGCTTCAGGCTTCAAAGCAGAGCCAGAGGTGTTTATaGATAGAGTGTGGGAATCCA | + |
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Preference number: 5 (lower is better) Translates to: GNPLGASSAFSWLQASKQSQRCL*IECGNP Trigger: TGGATTCCCACACTCTATCAATAAACACCTCTGGCT...CTGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS CCA 90 bp | TTGATAGAGTGTGGGAATCCACTGGGAGCTTCATCTGCATTTTCATaGCTTCAGGCTTCAAAGCAGTTAAAATGGCCACCACCTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LIECGNPLGASSAFS*LQASKQLKWPPPFF Trigger: AAAGAAAGGTGGTGGCCATTTTAACTGCTTTGAAGCCTGAAGCCATGAAAATGCAGATGAAGCTCCCAGTGGATTCCCACACTCTATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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| CDS CCA 72 bp | GCAGCAGCACAGTCAAAGTCAGCAAAAGGAGCTTCATaGCTAAGGCAGCCCAAAATGAAGCTGCAAGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: AAAQSKSAKGAS*LRQPKMKLQVR Trigger: TCGGACTTGCAGCTTCATTTTGGGCTGCCTTAGCCATGAAGCTCCTTTTGCTGACTTTGACTGTGCTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376309.4 |
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