Pregenerated sensors for DEFB121 (Homo sapiens)
Ensembl gene IDs: ENSG00000204548Ensembl transcript IDs: ENST00000376312.3, ENST00000376314.3
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GCCAAGAATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTCCAACATTTCATGACTaGGGTGACCTGGGCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: AKNDLIELQDPMMLRLKVPTFHD*GDLGQE Trigger: CTCCTGGCCCAGGTCACCCCAGTCATGAAATGTTGG...AACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATTCTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS-3UTR CCA 90 bp | GCCAAGAATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTGTTGAGACTCAAGGTTaGAAGAGAGGTGTCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: AKNDLIELQDPMMLRLKVVETQG*KRGVRL Trigger: CAGTCTGACACCTCTCTTCCAACCTTGAGTCTCAAC...AACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATTCTTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS-3UTR GCA 90 bp | AATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTGGAAGAATGTTGTTCTGCACCTaGCTGACTTGCCCCAACATT | + |
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Preference number: 4 (lower is better) Translates to: NDLIELQDPMMLRLKVGRMLFCT*LTCPNI Trigger: AATGTTGGGGCAAGTCAGGCAGGTGCAGAACAACAT...TCTTCCAACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS-3UTR TCA 90 bp | AATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTGGAAGATTCATGAATGATGAATaGTCAGGGAGGGATAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: NDLIELQDPMMLRLKVGRFMNDE*SGRDRR Trigger: CCTCCTATCCCTCCCTGATCATTCATCATTCATGAA...TCTTCCAACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS-3UTR TCA 90 bp | GCCAAGAATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTTCAGACTGCAGAAGTTaGTTCCAGGCTTGTATTTGT | + |
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Preference number: 4 (lower is better) Translates to: AKNDLIELQDPMMLRLKVSDCRS*FQACIC Trigger: ACAAATACAAGCCTGGAATCAACTTCTGCAGTCTGA...AACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATTCTTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS-3UTR TCA 90 bp | AAGAATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTGGAGAAGAAGGAGCTTCATaGATGATGAATGATCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: KNDLIELQDPMMLRLKVGEEGAS*MMNDQG Trigger: TCCCTGATCATTCATCATTCATGAAGCTCCTTCTTC...TCCAACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS GCA 90 bp | AGCTCAGAGATCTCTCTGCTCACCGTGATCTTCAAGTTTGAAAATTaGATCTCAAATCTAAGACCCAGAGGGCTCACCCAGAGTCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SSEISLLTVIFKFEN*ISNLRPRGLTQSRG Trigger: GCCTCGACTCTGGGTGAGCCCTCTGGGTCTTAGATTTGAGATGCAATTTTCAAACTTGAAGATCACGGTGAGCAGAGAGATCTCTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376312.3 |
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| CDS TCA 90 bp | TATATAGTATACTTCACTTTCTTTACATGTTGTTCTGCACCTGCCTaGCTTGCCCCAACATTTCATGACTGGGGTGACCTGGGCCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: YIVYFTFFTCCSAPA*LAPTFHDWGDLGQE Trigger: CTCCTGGCCCAGGTCACCCCAGTCATGAAATGTTGGGGCAAGTCAGGCAGGTGCAGAACAACATGTAAAGAAAGTGAAGTATACTATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS-3UTR CAA 90 bp | AAGAATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTGGACTGCACCTGCCTGACTaGCCCCAACATTTCATGACT | + |
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Preference number: 5 (lower is better) Translates to: KNDLIELQDPMMLRLKVGLHLPD*PQHFMT Trigger: AGTCATGAAATGTTGGGGCAAGTCAGGCAGGTGCAG...TCCAACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS-3UTR CAA 90 bp | GCCAAGAATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTGTCAGACTGCAGAAGTaGATTCCAGGCTTGTATTTG | + |
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Preference number: 5 (lower is better) Translates to: AKNDLIELQDPMMLRLKVVRLQK*IPGLYL Trigger: CAAATACAAGCCTGGAATCAACTTCTGCAGTCTGAC...AACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATTCTTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS-3UTR CAA 90 bp | AATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTGGAAGACAGGATCCCATGATGTaGAGACTCAAGGTTGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: NDLIELQDPMMLRLKVGRQDPMM*RLKVGR Trigger: TCTTCCAACCTTGAGTCTCAACATCATGGGATCCTG...TCTTCCAACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS-3UTR CAA 90 bp | AATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTGGAAGACACTTTCTTTACATGTaGTTCTGCACCTGCCTGACT | + |
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Preference number: 5 (lower is better) Translates to: NDLIELQDPMMLRLKVGRHFLYM*FCTCLT Trigger: AGTCAGGCAGGTGCAGAACAACATGTAAAGAAAGTG...TCTTCCAACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS-3UTR CAA 90 bp | GCCAAGAATGATTTAATAGAACTGCAGGATCCCATGATGTTGAGACTCAAGGTTTTTACAGGTACATACTaGGGATCCACACAGCACTTA | + |
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Preference number: 5 (lower is better) Translates to: AKNDLIELQDPMMLRLKVFTGTY*GSTQHL Trigger: TAAGTGCTGTGTGGATCCCAAGTATGTACCTGTAAA...AACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATTCTTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376314.3 |
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| CDS TCA 90 bp | TATATAGTATACTTCACTTTCTTTACATGTTGTTCTGCACCTGCCTaGCTTGCCCCAACATTTCATGACTTCCTTGACTTCTTGAAACAT | + |
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Preference number: 5 (lower is better) Translates to: YIVYFTFFTCCSAPA*LAPTFHDFLDFLKH Trigger: ATGTTTCAAGAAGTCAAGGAAGTCATGAAATGTTGGGGCAAGTCAGGCAGGTGCAGAACAACATGTAAAGAAAGTGAAGTATACTATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376312.3 |
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| CDS GCA 72 bp | ATCTCTCTGCTCACCGTGATCTTCAAGTTTGAAAATTaGATCTCAAATCTAAGACCCAGAGGGCTCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: ISLLTVIFKFEN*ISNLRPRGLTQ Trigger: CTGGGTGAGCCCTCTGGGTCTTAGATTTGAGATGCAATTTTCAAACTTGAAGATCACGGTGAGCAGAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376312.3 |
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| CDS TCA 72 bp | CTCAGAGATCTCTCTGCTCACCGTGATCTTCAAGTTTaGAAATTGCATCTCAAATCTAAGACCCAGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LRDLSAHRDLQV*KLHLKSKTQRA Trigger: AGCCCTCTGGGTCTTAGATTTGAGATGCAATTTTCAAACTTGAAGATCACGGTGAGCAGAGAGATCTCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376312.3 |
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| CDS CAA 72 bp | AAGAATGATTTAATAGAACTGCAGGATCCCATGATGTaGAGACTCAAGGTTGGAAGAGAGGTGTCAGACTGC | + |
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Preference number: 6 (lower is better) Translates to: KNDLIELQDPMM*RLKVGREVSDC Trigger: GCAGTCTGACACCTCTCTTCCAACCTTGAGTCTCAACATCATGGGATCCTGCAGTTCTATTAAATCATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376312.3 ENST00000376314.3 |
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| CDS CAA 90 bp | TGGAAGAGAGGTGTCAGACTGCAGAAGTTGATTCCAGGCTTGTATTaGTGTCTGTTAATTTTGGTTTTACAGGTACATACTTGGGATCCA | + |
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Preference number: 6 (lower is better) Translates to: WKRGVRLQKLIPGLY*CLLILVLQVHTWDP Trigger: TGGATCCCAAGTATGTACCTGTAAAACCAAAATTAACAGACACAAATACAAGCCTGGAATCAACTTCTGCAGTCTGACACCTCTCTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000376312.3 ENST00000376314.3 |
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| CDS CAA 72 bp | GGTGTCAGACTGCAGAAGTTGATTCCAGGCTTGTATTaGTGTCTGTTAATTTTGGTTTTACAGGTACATACT | + |
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Preference number: 6 (lower is better) Translates to: GVRLQKLIPGLY*CLLILVLQVHT Trigger: AGTATGTACCTGTAAAACCAAAATTAACAGACACAAATACAAGCCTGGAATCAACTTCTGCAGTCTGACACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000376312.3 ENST00000376314.3 |
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| CDS CAA 72 bp | TGCATAATATATAGTATACTTCACTTTCTTTACATGTaGTTCTGCACCTGCCTGACTTGCCCCAACATTTCA | + |
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Preference number: 6 (lower is better) Translates to: CIIYSILHFLYM*FCTCLTCPNIS Trigger: TGAAATGTTGGGGCAAGTCAGGCAGGTGCAGAACAACATGTAAAGAAAGTGAAGTATACTATATATTATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376312.3 ENST00000376314.3 |
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