Pregenerated sensors for DEFB119 (Homo sapiens)
Ensembl gene IDs: ENSG00000180483Ensembl transcript IDs: ENST00000339144.3, ENST00000376315.2, ENST00000376321.4, ENST00000492344.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTTATCCTCATGTAGGACTGGAGGCAGCAGGACTGACAATTTCTaGAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAGAGGCCCTAC | + |
|
Preference number: 1 (lower is better) Translates to: CLSSCRTGGSRTDNF*NRGRAVRSFCKRPY Trigger: GTAGGGCCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCTGCTGCCTCCAGTCCTACATGAGGATAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| 3UTR GCA 90 bp | ACTGCTTCTCATAAGACCAGTCGGTATTTTCCTCTTTGCCAGAAATaGTTATCCTCATGTAGGACTGGAGGCAGCAGGACTGACAATTTC | + |
|
Preference number: 1 (lower is better) Translates to: TASHKTSRYFPLCQK*LSSCRTGGSRTDNF Trigger: GAAATTGTCAGTCCTGCTGCCTCCAGTCCTACATGAGGATAAGCATTTCTGGCAAAGAGGAAAATACCGACTGGTCTTATGAGAAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCACTCAAGGCCTCTTTGCCAGAAATaGTTATCCTCATGTAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: QQVSVPRELENGNHQHSRPLCQK*LSSCRT Trigger: AGTCCTACATGAGGATAAGCATTTCTGGCAAAGAGG...CCTTGAGTGCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCACTCAAGGTAGTCTTGGCCACTGCTTCTCATAAGACCAGTCGGTATTTTGCTGTTCGTTCTTTTTaGAAGAGGCCCTACAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: PALKVVLATASHKTSRYFAVRSF*KRPYKF Trigger: GAATTTGTAGGGCCTCTTGCAAAAAGAACGAACAGC...AAAATACCGACTGGTCTTATGAGAAGCAGTGGCCAAGACTACCTTGAGTGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGGTAGTCTTGGCCACTGCTTCTCATAAGACCAGTCGGTATTTTCCTCTTTGCAGGACTGACAATTTCTaGAATAGAGGTAGGGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: KVVLATASHKTSRYFPLCRTDNF*NRGRAV Trigger: AACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCT...GCAAAGAGGAAAATACCGACTGGTCTTATGAGAAGCAGTGGCCAAGACTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCACTCAAGGGGCTGTTCGTTCTTTTaGCAAGAGGCCCTACAAATT | + |
|
Preference number: 3 (lower is better) Translates to: QQVSVPRELENGNHQHSRGCSFF*QEALQI Trigger: AATTTGTAGGGCCTCTTGCAAAAAGAACGAACAGCC...CCTTGAGTGCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| 3UTR GCA 72 bp | TCATGTAGGACTGGAGGCAGCAGGACTGACAATTTCTaGAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCRTGGSRTDNF*NRGRAVRSFCK Trigger: CTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCTGCTGCCTCCAGTCCTACATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| 3UTR GCA 72 bp | CATAAGACCAGTCGGTATTTTCCTCTTTGCCAGAAATaGTTATCCTCATGTAGGACTGGAGGCAGCAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: HKTSRYFPLCQK*LSSCRTGGSRT Trigger: AGTCCTGCTGCCTCCAGTCCTACATGAGGATAAGCATTTCTGGCAAAGAGGAAAATACCGACTGGTCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCGGAAATAGGGTTCCCTaGAGCACGGCAGAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVDSRSLCPESLRMVITSGNRVP*STAEMS Trigger: GCTCATCTCTGCCGTGCTGCAGGGAACCCTATTTCC...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000376321.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCGACAGCAGGTCTCTGTaGCCAGAGAGCTTGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: GVDSRSLCPESLRMVITSDSRSL*PESLRM Trigger: CATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTC...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000376321.4 |
||
| CDS-3UTR TCA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCGCAGCACGGCAGAGATaGGCTTTGCTTTTATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVDSRSLCPESLRMVITSAARQR*ALLLSA Trigger: TGCTGATAAAAGCAAAGCTCATCTCTGCCGTGCTGC...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000376321.4 |
||
| CDS-3UTR CCA 90 bp | GTAGGACTGGAGGCAGCAGGACTGACAATTTCTGCAATAGAGGTAGGGCTGTTCGATGTGGCGTTTGCCTaGCAGTATCCAGGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VGLEAAGLTISAIEVGLFDVAFA*QYPGSI Trigger: GATGCTGCCTGGATACTGCCAGGCAAACGCCACATC...GAACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCTGCTGCCTCCAGTCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCTTCCACTGTTACCCATaGATCGAAGGATGTGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVDSRSLCPESLRMVITSFHCYP*IEGCGV Trigger: AACGCCACATCCTTCGATGCATGGGTAACAGTGGAA...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000376321.4 |
||
| CDS-3UTR GCA 90 bp | GTAGGACTGGAGGCAGCAGGACTGACAATTTCTGCAATAGAGGTAGGGCTGTTCGACAGCAGGTCTCTGTaGCCAGAGAGCTTGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VGLEAAGLTISAIEVGLFDSRSL*PESLRM Trigger: CATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTC...GAACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCTGCTGCCTCCAGTCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCGAAGGATGTGGCGTTTaGCTGATATCACTGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVDSRSLCPESLRMVITSEGCGV*LISLVL Trigger: AAGAACCAGTGATATCAGGCAAACGCCACATCCTTC...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376321.4 |
||
| CDS-3UTR CCA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCATGCATCGAAGGATGTaGCGTTTGCCTGATATCACT | + |
|
Preference number: 4 (lower is better) Translates to: GVDSRSLCPESLRMVITSMHRRM*RLPDIT Trigger: AGTGATATCAGGCAAACGCCACATCCTTCGATGCAT...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376321.4 |
||
| CDS-3UTR GCA 90 bp | ACTGACAATTTCTGCAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAGAGGCCCGGAAATAGGGTTCCCTaGAGCACGGCAGAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDNFCNRGRAVRSFCKRPGNRVP*STAEMS Trigger: GCTCATCTCTGCCGTGCTGCAGGGAACCCTATTTCC...GGGCCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATTGTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCAGGACTGACAATTTCTaGAATAGAGGTAGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVDSRSLCPESLRMVITSRTDNF*NRGRAV Trigger: AACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCT...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000376321.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCCCTCTTTGCCAGAAATaGTTATCCTCATGTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GVDSRSLCPESLRMVITSPLCQK*LSSCRT Trigger: AGTCCTACATGAGGATAAGCATTTCTGGCAAAGAGG...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000376321.4 |
||
| CDS-3UTR GCA 90 bp | GTAGGACTGGAGGCAGCAGGACTGACAATTTCTGCAATAGAGGTAGGGCTGTTCCCTCTTTGCCAGAAATaGTTATCCTCATGTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VGLEAAGLTISAIEVGLFPLCQK*LSSCRT Trigger: AGTCCTACATGAGGATAAGCATTTCTGGCAAAGAGG...GAACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCTGCTGCCTCCAGTCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGGACTGACAATTTCTGCAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAGGCAGCACGGCAGAGATaGGCTTTGCTTTTATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTDNFCNRGRAVRSFCKAARQR*ALLLSA Trigger: TGCTGATAAAAGCAAAGCTCATCTCTGCCGTGCTGC...CTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR CCA 90 bp | AATGCTTATCCTCATGTAGGACTGGAGGCAGCAGGACTGACAATTTCTGCAATAATGCATCGAAGGATGTaGCGTTTGCCTGGCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: NAYPHVGLEAAGLTISAIMHRRM*RLPGSI Trigger: GATACTGCCAGGCAAACGCCACATCCTTCGATGCAT...TATTGCAGAAATTGTCAGTCCTGCTGCCTCCAGTCCTACATGAGGATAAGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR TCA 90 bp | AGGACTGACAATTTCTGCAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAGAGGTGTCCTCACCAGAGCTaGTATCACTGGTTCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RTDNFCNRGRAVRSFCKRCPHQS*YHWFFY Trigger: ATAGAAGAACCAGTGATATCAGCTCTGGTGAGGACA...CCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGCAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAGAGGCCCTACAAATTTCCACTGTTACCCATaGATCGAAGGATGTGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISAIEVGLFVLFARGPTNFHCYP*IEGCGV Trigger: AACGCCACATCCTTCGATGCATGGGTAACAGTGGAA...ATTTGTAGGGCCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR GCA 90 bp | GCAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAGAGGCCCTACAAATTCCACTGCTGTTCGTTCTTTTTaGAAGAGGCCCTACAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: AIEVGLFVLFARGPTNSTAVRSF*KRPYKF Trigger: GAATTTGTAGGGCCTCTTGCAAAAAGAACGAACAGC...AGTGGAATTTGTAGGGCCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR GCA 90 bp | CTGACAATTTCTGCAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAGAGGCCCTAGGACTGACAATTTCTaGAATAGAGGTAGGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTISAIEVGLFVLFARGPRTDNF*NRGRAV Trigger: AACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCT...AGGGCCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATTGTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS TCA 90 bp | GGTAAAGAAGTTTCATGGCTGGCAGACCTGAGAGGAGGAGGTGGCTaGGCTGCAGGGGAAGGAAATAGGGTTCCCTGCAGCACGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKEVSWLADLRGGGG*AAGEGNRVPCSTAE Trigger: CTCTGCCGTGCTGCAGGGAACCCTATTTCCTTCCCCTGCAGCTCAGCCACCTCCTCCTCTCAGGTCTGCCAGCCATGAAACTTCTTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339144.3 ENST00000376321.4 ENST00000492344.1 |
||
| CDS CCA 90 bp | CAAGAGGCCCTACAAATTCCACTGTTACCCATGCATCGAAGGATGTaGCGTTTGCCTGGCAGTATCCAGGCAGCATCCCACTGTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QEALQIPLLPMHRRM*RLPGSIQAASHCPH Trigger: GTGAGGACAGTGGGATGCTGCCTGGATACTGCCAGGCAAACGCCACATCCTTCGATGCATGGGTAACAGTGGAATTTGTAGGGCCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000492344.1 |
||
| CDS-3UTR CAA 90 bp | CATGTAGGACTGGAGGCAGCAGGACTGACAATTTCTGCAATAGAGGTAGGGCTGCGAAGGATGTGGCGTTaGCCTGGCAGTATCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HVGLEAAGLTISAIEVGLRRMWR*PGSIQA Trigger: TGCCTGGATACTGCCAGGCAAACGCCACATCCTTCG...CAGCCCTACCTCTATTGCAGAAATTGTCAGTCCTGCTGCCTCCAGTCCTACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR CAA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCCTGTGCCCAGAGAGCTaGAGAATGGTAATCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVDSRSLCPESLRMVITSLCPES*RMVITS Trigger: GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAG...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000376321.4 |
||
| CDS-3UTR CAA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCGCACTCAAGGTAGTCTaGGCCACTGCTTCTCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVDSRSLCPESLRMVITSALKVV*ATASHK Trigger: CTTATGAGAAGCAGTGGCCAAGACTACCTTGAGTGC...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000376321.4 |
||
| CDS-3UTR CAA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCCGAAGGATGTGGCGTTaGCCTGATATCACTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GVDSRSLCPESLRMVITSRRMWR*PDITGS Trigger: AGAACCAGTGATATCAGGCAAACGCCACATCCTTCG...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376321.4 |
||
| CDS-3UTR CAA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCGGCTGTTCGTTCTTTTaGCAAGAGGCCCTACAAATT | + |
|
Preference number: 5 (lower is better) Translates to: GVDSRSLCPESLRMVITSGCSFF*QEALQI Trigger: AATTTGTAGGGCCTCTTGCAAAAAGAACGAACAGCC...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000376321.4 |
||
| CDS GCA 90 bp | GTTCGTTCTTTTTGCAAGAGGCCCTACAAATTCCACTGTTACCCATaGATCGAAGGATGTGGCGTTTGCCTGGCAGTATCCAGGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VRSFCKRPYKFHCYP*IEGCGVCLAVSRQH Trigger: ATGCTGCCTGGATACTGCCAGGCAAACGCCACATCCTTCGATGCATGGGTAACAGTGGAATTTGTAGGGCCTCTTGCAAAAAGAACGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000492344.1 |
||
| CDS-3UTR CAA 90 bp | GGGGTTGACAGCAGGTCTCTGTGCCCAGAGAGCTTGAGAATGGTAATCACCAGCTCGGTATTTTCCTCTTaGCCAGAAATGCTTATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVDSRSLCPESLRMVITSSVFSS*PEMLIL Trigger: GAGGATAAGCATTTCTGGCAAAGAGGAAAATACCGA...GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAGAGACCTGCTGTCAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000376321.4 |
||
| CDS-3UTR CAA 90 bp | CCAGCACTCAAGGTAGTCTTGGCCACTGCTTCTCATAAGACCAGTCGGTATTTTCTGTGCCCAGAGAGCTaGAGAATGGTAATCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PALKVVLATASHKTSRYFLCPES*RMVITS Trigger: GCTGGTGATTACCATTCTCAAGCTCTCTGGGCACAG...AAAATACCGACTGGTCTTATGAGAAGCAGTGGCCAAGACTACCTTGAGTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS-3UTR CAA 90 bp | CTGACAATTTCTGCAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAGAGGCCCTGCACTCAAGGTAGTCTaGGCCACTGCTTCTCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTISAIEVGLFVLFARGPALKVV*ATASHK Trigger: CTTATGAGAAGCAGTGGCCAAGACTACCTTGAGTGC...AGGGCCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATTGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS GCA 90 bp | AGGACTGACAATTTCTGCAATAGAGGTAGGGCTGTTCGTTCTTTTTaGAAGAGGCCCTACAAATTCCACTGTTACCCATGCATCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RTDNFCNRGRAVRSF*KRPYKFHCYPCIEG Trigger: TCCTTCGATGCATGGGTAACAGTGGAATTTGTAGGGCCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATTGTCAGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339144.3 ENST00000376321.4 ENST00000492344.1 |
||
| CDS GCA 90 bp | GTTCGTTCTTTTTGCAAGAGGCCCTACAAATTCCACTGTTACCCATaGATCGAAGGATGTGGCGTTTGCCTGATATCACTGGTTCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VRSFCKRPYKFHCYP*IEGCGVCLISLVLL Trigger: TAGAAGAACCAGTGATATCAGGCAAACGCCACATCCTTCGATGCATGGGTAACAGTGGAATTTGTAGGGCCTCTTGCAAAAAGAACGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376321.4 |
||
| CDS-3UTR CAA 90 bp | ACTGACAATTTCTGCAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAGAGGCCCGGCTGTTCGTTCTTTTaGCAAGAGGCCCTACAAATT | + |
|
Preference number: 5 (lower is better) Translates to: TDNFCNRGRAVRSFCKRPGCSFF*QEALQI Trigger: AATTTGTAGGGCCTCTTGCAAAAAGAACGAACAGCC...GGGCCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATTGTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS GCA 90 bp | CTGTCCTCACCAGAGCTTTGCATTATTATGTCATTTCATCCTTACTaGAATCCTGATATCACTGGTTCTTCTATGGCCAGAAGGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSPELCIIMSFHPY*NPDITGSSMARRMA Trigger: TGCCATCCTTCTGGCCATAGAAGAACCAGTGATATCAGGATTGCAGTAAGGATGAAATGACATAATAATGCAAAGCTCTGGTGAGGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492344.1 |
||
| CDS-3UTR CAA 90 bp | AATTTCTGCAATAGAGGTAGGGCTGTTCGTTCTTTTTGCAAGAGGCCCTACAAATCGGTATTTTCCTCTTaGCCAGAAATGCTTATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NFCNRGRAVRSFCKRPYKSVFSS*PEMLIL Trigger: GAGGATAAGCATTTCTGGCAAAGAGGAAAATACCGA...TTTGTAGGGCCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339144.3 |
||
| CDS TCA 90 bp | ACCAGAGCTTTGCATTATTATGTCATTTCATCCTTACTGCAATCCTaGTATCACTGGTTCTTCTATGGCCAGAAGGATGGCAAGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: TRALHYYVISSLLQS*YHWFFYGQKDGKKQ Trigger: CTGTTTCTTGCCATCCTTCTGGCCATAGAAGAACCAGTGATATCAGGATTGCAGTAAGGATGAAATGACATAATAATGCAAAGCTCTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492344.1 |
||
| CDS CCA 90 bp | TTATATTTGTCTTCATTTTTGGAGCTGTTGTGGACATCTGAGGAGTaGTCCAGCCAAGGATTCCATGAATTGTTACTGGTTGGATTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LYLSSFLELLWTSEE*SSQGFHELLLVGLL Trigger: TAACAATCCAACCAGTAACAATTCATGGAATCCTTGGCTGGACCACTCCTCAGATGTCCACAACAGCTCCAAAAATGAAGACAAATATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376315.2 |
||
| CDS GCA 72 bp | TTCCACTGTTACCCATGCATCGAAGGATGTGGCGTTTaGCTGGCAGTATCCAGGCAGCATCCCACTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FHCYPCIEGCGV*LAVSRQHPTVL Trigger: GAGGACAGTGGGATGCTGCCTGGATACTGCCAGGCAAACGCCACATCCTTCGATGCATGGGTAACAGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000492344.1 |
||
| CDS CCA 72 bp | ACTGTTACCCATGCATCGAAGGATGTGGCGTTTGCCTaGCAGTATCCAGGCAGCATCCCACTGTCCTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: TVTHASKDVAFA*QYPGSIPLSSP Trigger: TGGTGAGGACAGTGGGATGCTGCCTGGATACTGCCAGGCAAACGCCACATCCTTCGATGCATGGGTAACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000492344.1 |
||
| CDS CAA 72 bp | ATTCCACTGTTACCCATGCATCGAAGGATGTGGCGTTaGCCTGGCAGTATCCAGGCAGCATCCCACTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: IPLLPMHRRMWR*PGSIQAASHCP Trigger: AGGACAGTGGGATGCTGCCTGGATACTGCCAGGCAAACGCCACATCCTTCGATGCATGGGTAACAGTGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000492344.1 |
||
| CDS CCA 72 bp | CTACAAATTCCACTGTTACCCATGCATCGAAGGATGTaGCGTTTGCCTGGCAGTATCCAGGCAGCATCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LQIPLLPMHRRM*RLPGSIQAASH Trigger: GTGGGATGCTGCCTGGATACTGCCAGGCAAACGCCACATCCTTCGATGCATGGGTAACAGTGGAATTTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339144.3 ENST00000492344.1 |
||
| CDS CAA 72 bp | CGATTTCGGCAGCGTATGATGCTGTCTTCACCATCTTaGCACAACAACCGGCAGTGTCCATCCATCCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: RFRQRMMLSSPS*HNNRQCPSIQH Trigger: GTGTTGGATGGATGGACACTGCCGGTTGTTGTGCAAAGATGGTGAAGACAGCATCATACGCTGCCGAAATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376315.2 |
||
| CDS CAA 90 bp | CACCGTTTACGATTTCGGCAGCGTATGATGCTGTCTTCACCATCTTaGCACAACAACCGGCAGTGTCCATCCATCCAACACTCTACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: HRLRFRQRMMLSSPS*HNNRQCPSIQHSTD Trigger: ATCAGTAGAGTGTTGGATGGATGGACACTGCCGGTTGTTGTGCAAAGATGGTGAAGACAGCATCATACGCTGCCGAAATCGTAAACGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376315.2 |
||
| CDS GCA 72 bp | AATTTCTGCAATAGAGGTAGGGCTGTTCGTTCTTTTTaGAAGAGGCCCTACAAATTCCACTGTTACCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: NFCNRGRAVRSF*KRPYKFHCYPC Trigger: GCATGGGTAACAGTGGAATTTGTAGGGCCTCTTGCAAAAAGAACGAACAGCCCTACCTCTATTGCAGAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339144.3 ENST00000376321.4 ENST00000492344.1 |
||
| CDS GCA 72 bp | TATCCAGGCAGCATCCCACTGTCCTCACCAGAGCTTTaGATTATTATGTCATTTCATCCTTACTGCAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: YPGSIPLSSPEL*IIMSFHPYCNP Trigger: AGGATTGCAGTAAGGATGAAATGACATAATAATGCAAAGCTCTGGTGAGGACAGTGGGATGCTGCCTGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492344.1 |
||
| CDS CCA 72 bp | TCTTCATTTTTGGAGCTGTTGTGGACATCTGAGGAGTaGTCCAGCCAAGGATTCCATGAATTGTTACTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSFLELLWTSEE*SSQGFHELLLV Trigger: AACCAGTAACAATTCATGGAATCCTTGGCTGGACCACTCCTCAGATGTCCACAACAGCTCCAAAAATGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376315.2 |
||
| CDS TCA 72 bp | TTGCATTATTATGTCATTTCATCCTTACTGCAATCCTaGTATCACTGGTTCTTCTATGGCCAGAAGGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LHYYVISSLLQS*YHWFFYGQKDG Trigger: GCCATCCTTCTGGCCATAGAAGAACCAGTGATATCAGGATTGCAGTAAGGATGAAATGACATAATAATGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492344.1 |
||
| CDS CCA 72 bp | TCATTTCTATCTATTAGTTATATTTGTCTTCATTTTTaGAGCTGTTGTGGACATCTGAGGAGTGGTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFLSISYICLHF*SCCGHLRSGPA Trigger: GGCTGGACCACTCCTCAGATGTCCACAACAGCTCCAAAAATGAAGACAAATATAACTAATAGATAGAAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376315.2 |
||