Pregenerated sensors for DEFB118 (Homo sapiens)
Ensembl gene IDs: ENSG00000131068Ensembl transcript IDs: ENST00000253381.3
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATGATCCATCCTTTCACCCACAATTGGGGGTCCATGATTACCCTTaGATGTCCATGTGTGATCAAGGCTTGGTCAAAAAGATGGGTCTA | + |
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Preference number: 1 (lower is better) Translates to: NDPSFHPQLGVHDYP*MSMCDQGLVKKMGL Trigger: TAGACCCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATGGACCCCCAATTGTGGGTGAAAGGATGGATCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| 3UTR-3UTR CCA 90 bp | CAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCATGAAGACAGTGGGAGGGTCACTGTaGTGTTTTCAGTGCTTTATC | + |
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Preference number: 2 (lower is better) Translates to: QMQRFRILIMTTYAAMKTVGGSL*CFQCFI Trigger: GATAAAGCACTGAAAACACCACAGTGACCCTCCCAC...TGTCTTCATGGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| 3UTR-3UTR TCA 90 bp | CTACTCTCACAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCGTTGTGGAAATAATGTaGCATTTCAAGAAGAGCACT | + |
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Preference number: 2 (lower is better) Translates to: LLSQMQRFRILIMTTYAAVVEIM*HFKKST Trigger: AGTGCTCTTCTTGAAATGTCACATTATTTCCACAAC...GGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTGTGAGAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| 3UTR CCA 72 bp | TCCTTTCACCCACAATTGGGGGTCCATGATTACCCTTaGATGTCCATGTGTGATCAAGGCTTGGTCAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: SFHPQLGVHDYP*MSMCDQGLVKK Trigger: CTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATGGACCCCCAATTGTGGGTGAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| 3UTR CCA 72 bp | ATGATTACCCTTGGATGTCCATGTGTGATCAAGGCTTaGTCAAAAAGATGGGTCTACAGAGCCATAAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: MITLGCPCVIKA*SKRWVYRAIKA Trigger: AGCTTTTATGGCTCTGTAGACCCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | ATAGCTCACACCTGGGGCGGCCAATTTCCTACAGTGAGAGATAAAACCTGGCTCTTCATAGCTCACACCTaGGGCGGCCAATTTCCTACA | + |
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Preference number: 4 (lower is better) Translates to: IAHTWGGQFPTVRDKTWLFIAHT*GGQFPT Trigger: TGTAGGAAATTGGCCGCCCCAGGTGTGAGCTATGAA...GAGCCAGGTTTTATCTCTCACTGTAGGAAATTGGCCGCCCCAGGTGTGAGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | ATAGCTCACACCTGGGGCGGCCAATTTCCTACAGTGAGAGATAAAACCTGGCTCGCTATGGTGAACATTTaGAAGAGAGGTCTCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: IAHTWGGQFPTVRDKTWLAMVNI*KRGLSS Trigger: GGAACTGAGACCTCTCTTCCAAATGTTCACCATAGC...GAGCCAGGTTTTATCTCTCACTGTAGGAAATTGGCCGCCCCAGGTGTGAGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | ATAGCTCACACCTGGGGCGGCCAATTTCCTACAGTGAGAGATAAAACCTGGCTCCATGAAGACAGCTGTTaGGAAGACAGAACGATACAT | + |
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Preference number: 4 (lower is better) Translates to: IAHTWGGQFPTVRDKTWLHEDSC*EDRTIH Trigger: ATGTATCGTTCTGTCTTCTCAACAGCTGTCTTCATG...GAGCCAGGTTTTATCTCTCACTGTAGGAAATTGGCCGCCCCAGGTGTGAGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | TCCATGATTACCCTTGGATGTCCATGTGTGATCAAGGCTTGGTCAAAAAGATGGGCCTGTGGTCTTCATTaGATGGAATGCAGCAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SMITLGCPCVIKAWSKRWACGLH*MECSKL Trigger: GAGCTTGCTGCATTCCATCCAATGAAGACCACAGGC...CCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | TCCATGATTACCCTTGGATGTCCATGTGTGATCAAGGCTTGGTCAAAAAGATGGCCACTTATGCTGCCATaGAGACAGCTGTTGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SMITLGCPCVIKAWSKRWPLMLP*RQLLRR Trigger: TCTTCTCAACAGCTGTCTTCATGGCAGCATAAGTGG...CCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | TCCATGATTACCCTTGGATGTCCATGTGTGATCAAGGCTTGGTCAAAAAGATGGCCTTTCACCCACAATTaGGGGTCCATGATTACCCTT | + |
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Preference number: 4 (lower is better) Translates to: SMITLGCPCVIKAWSKRWPFTHN*GSMITL Trigger: AAGGGTAATCATGGACCCCCAATTGTGGGTGAAAGG...CCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR GCA 90 bp | ATAGCTCACACCTGGGGCGGCCAATTTCCTACAGTGAGAGATAAAACCTGGCTCAAGCTCGAAGATTTTTaGATGTATCTTTCACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: IAHTWGGQFPTVRDKTWLKLEDF*MYLSLL Trigger: AAGCAGTGAAAGATACATGCAAAAATCTTCGAGCTT...GAGCCAGGTTTTATCTCTCACTGTAGGAAATTGGCCGCCCCAGGTGTGAGCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| 3UTR CAA 72 bp | CATGATTACCCTTGGATGTCCATGTGTGATCAAGGCTaGGTCAAAAAGATGGGTCTACAGAGCCATAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: HDYPWMSMCDQG*VKKMGLQSHKS Trigger: GCTTTTATGGCTCTGTAGACCCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | CTACTCTCACAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCGCAGGAACTCGCCTGTaGTCTTCATTGGATGGAATG | + |
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Preference number: 4 (lower is better) Translates to: LLSQMQRFRILIMTTYAAAGTRL*SSLDGM Trigger: CATTCCATCCAATGAAGACCACAGGCGAGTTCCTGC...GGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTGTGAGAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | CAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCATGAAGACAAGTCACTCAAGGGTGTaGGAGATGTCGCAGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: QMQRFRILIMTTYAAMKTSHSRV*EMSQEL Trigger: GAGTTCCTGCGACATCTCCCACACCCTTGAGTGACT...TGTCTTCATGGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | TCCATGATTACCCTTGGATGTCCATGTGTGATCAAGGCTTGGTCAAAAAGATGGGTCCATGATTACCCTTaGATGTCCATGTGTGATCAA | + |
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Preference number: 4 (lower is better) Translates to: SMITLGCPCVIKAWSKRWVHDYP*MSMCDQ Trigger: TTGATCACACATGGACATCCAAGGGTAATCATGGAC...CCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | AGAATTTTGATCATGACCACTTATGCTGCCATGAAGACAGCTGTTGAGAAGACAAGTCATGAGCTATGGTaGACATTTGGAAGAGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RILIMTTYAAMKTAVEKTSHELW*TFGREV Trigger: GACCTCTCTTCCAAATGTTCACCATAGCTCATGACT...TGTCTTCTCAACAGCTGTCTTCATGGCAGCATAAGTGGTCATGATCAAAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | CAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCATGAAGACAGCCGAGAGGAAGTCATaGGCTATGGTGAACATTTGG | + |
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Preference number: 4 (lower is better) Translates to: QMQRFRILIMTTYAAMKTAERKS*AMVNIW Trigger: CCAAATGTTCACCATAGCTCATGACTTCCTCTCGGC...TGTCTTCATGGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | CTACTCTCACAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCGCCAATTTCCTACAGTaGGAGATAAAACCTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLSQMQRFRILIMTTYAAANFLQ*EIKPGS Trigger: GGAGCCAGGTTTTATCTCTCACTGTAGGAAATTGGC...GGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTGTGAGAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | CTACTCTCACAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCACAATTGGGGGTCCATaGTTACCCTTGGATGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLSQMQRFRILIMTTYAATIGGP*LPLDVH Trigger: ATGGACATCCAAGGGTAATCATGGACCCCCAATTGT...GGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTGTGAGAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | TCCATGATTACCCTTGGATGTCCATGTGTGATCAAGGCTTGGTCAAAAAGATGGAATCAGGTAGATAAATaGTCCATCCTTTCACCCACA | + |
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Preference number: 4 (lower is better) Translates to: SMITLGCPCVIKAWSKRWNQVDK*SILSPT Trigger: TGTGGGTGAAAGGATGGATCATTTATCTACCTGATT...CCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | CTACTCTCACAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCGTGGGAGGGTCACTGTaGTGTTTTCAGTGCTTTATC | + |
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Preference number: 4 (lower is better) Translates to: LLSQMQRFRILIMTTYAAVGGSL*CFQCFI Trigger: GATAAAGCACTGAAAACACCACAGTGACCCTCCCAC...GGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTGTGAGAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | CAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCATGAAGACAAATAATTCCTGGTGTTaGGTCACTCAAGGGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QMQRFRILIMTTYAAMKTNNSWC*VTQGCG Trigger: CCCACACCCTTGAGTGACTCAACACCAGGAATTATT...TGTCTTCATGGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR GCA 90 bp | TCCATGATTACCCTTGGATGTCCATGTGTGATCAAGGCTTGGTCAAAAAGATGGCCATATCTTTCTTGCTaGTTACTTCAAAGTAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SMITLGCPCVIKAWSKRWPYLSC*LLQSSL Trigger: CAGACTACTTTGAAGTAAGCAGCAAGAAAGATATGG...CCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | CAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCATGAAGACAGTGGTCTTCATTGGATaGAATGCAGCAAGCTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: QMQRFRILIMTTYAAMKTVVFIG*NAASSK Trigger: CTTCGAGCTTGCTGCATTCCATCCAATGAAGACCAC...TGTCTTCATGGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | AGAATTTTGATCATGACCACTTATGCTGCCATGAAGACAGCTGTTGAGAAGACATGTGTGATCAAGGCTTaGTCAAAAAGATGGGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: RILIMTTYAAMKTAVEKTCVIKA*SKRWVY Trigger: GTAGACCCATCTTTTTGACCAAGCCTTGATCACACA...TGTCTTCTCAACAGCTGTCTTCATGGCAGCATAAGTGGTCATGATCAAAATTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | CTACTCTCACAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCATGAATGCTTTCACCTaGAGTGTCTCCTGTTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: LLSQMQRFRILIMTTYAAMNAFT*SVSCSR Trigger: TCTAGAACAGGAGACACTTCAGGTGAAAGCATTCAT...GGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTGTGAGAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | CTACTCTCACAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCTTGGATGTCCATGTGTaGTCAAGGCTTGGTCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: LLSQMQRFRILIMTTYAALDVHV*SRLGQK Trigger: TTTTTGACCAAGCCTTGATCACACATGGACATCCAA...GGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTGTGAGAGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR GCA 90 bp | AGAATTTTGATCATGACCACTTATGCTGCCATGAAGACAGCTGTTGAGAAGACACTTCATTGGATGGAATaGAGCAAGCTCGAAGATTTT | + |
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Preference number: 4 (lower is better) Translates to: RILIMTTYAAMKTAVEKTLHWME*SKLEDF Trigger: AAAATCTTCGAGCTTGCTGCATTCCATCCAATGAAG...TGTCTTCTCAACAGCTGTCTTCATGGCAGCATAAGTGGTCATGATCAAAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CCA 90 bp | CTACTCTCACAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCGCTTGGTCAAAAAGATaGGTCTACAGAGCCATAAAA | + |
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Preference number: 4 (lower is better) Translates to: LLSQMQRFRILIMTTYAAAWSKR*VYRAIK Trigger: TTTTATGGCTCTGTAGACCCATCTTTTTGACCAAGC...GGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTGTGAGAGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR TCA 90 bp | CAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCATGAAGACAGTTGTGGAAATAATGTaGCATTTCAAGAAGAGCACT | + |
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Preference number: 4 (lower is better) Translates to: QMQRFRILIMTTYAAMKTVVEIM*HFKKST Trigger: AGTGCTCTTCTTGAAATGTCACATTATTTCCACAAC...TGTCTTCATGGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CAA 90 bp | ATAGCTCACACCTGGGGCGGCCAATTTCCTACAGTGAGAGATAAAACCTGGCTCCGCCTGTGGTCTTCATaGGATGGAATGCAGCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: IAHTWGGQFPTVRDKTWLRLWSS*DGMQQA Trigger: AGCTTGCTGCATTCCATCCAATGAAGACCACAGGCG...GAGCCAGGTTTTATCTCTCACTGTAGGAAATTGGCCGCCCCAGGTGTGAGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS CCA 90 bp | GGGTGTGGGAGATGTCGCAGGAACTCGCCTGTGGTCTTCATTGGATaGAATGCAGCAAGCTCGAAGATTTTTGCATGTATCTTTCACTGC | + |
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Preference number: 5 (lower is better) Translates to: GCGRCRRNSPVVFIG*NAASSKIFACIFHC Trigger: GCAGTGAAAGATACATGCAAAAATCTTCGAGCTTGCTGCATTCCATCCAATGAAGACCACAGGCGAGTTCCTGCGACATCTCCCACACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS CCA 90 bp | GTTGAGTCACTCAAGGGTGTGGGAGATGTCGCAGGAACTCGCCTGTaGTCTTCATTGGATGGAATGCAGCAAGCTCGAAGATTTTTGCAT | + |
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Preference number: 5 (lower is better) Translates to: VESLKGVGDVAGTRL*SSLDGMQQARRFLH Trigger: ATGCAAAAATCTTCGAGCTTGCTGCATTCCATCCAATGAAGACCACAGGCGAGTTCCTGCGACATCTCCCACACCCTTGAGTGACTCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CAA 90 bp | ATAGCTCACACCTGGGGCGGCCAATTTCCTACAGTGAGAGATAAAACCTGGCTCACTGCTTCTCCATCTTaGCATTGTTTCCTGCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: IAHTWGGQFPTVRDKTWLTASPS*HCFLQC Trigger: GCACTGCAGGAAACAATGCAAAGATGGAGAAGCAGT...GAGCCAGGTTTTATCTCTCACTGTAGGAAATTGGCCGCCCCAGGTGTGAGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS GCA 90 bp | TGGGAGATGTCGCAGGAACTCGCCTGTGGTCTTCATTGGATGGAATaGAGCAAGCTCGAAGATTTTTGCATGTATCTTTCACTGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: WEMSQELACGLHWME*SKLEDFCMYLSLLL Trigger: GAGAAGCAGTGAAAGATACATGCAAAAATCTTCGAGCTTGCTGCATTCCATCCAATGAAGACCACAGGCGAGTTCCTGCGACATCTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS CCA 90 bp | TCAAGGGTGTGGGAGATGTCGCAGGAACTCGCCTGTGGTCTTCATTaGATGGAATGCAGCAAGCTCGAAGATTTTTGCATGTATCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: SRVWEMSQELACGLH*MECSKLEDFCMYLS Trigger: TGAAAGATACATGCAAAAATCTTCGAGCTTGCTGCATTCCATCCAATGAAGACCACAGGCGAGTTCCTGCGACATCTCCCACACCCTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CAA 90 bp | TCCATGATTACCCTTGGATGTCCATGTGTGATCAAGGCTTGGTCAAAAAGATGGTCCTTTCACCCACAATaGGGGGTCCATGATTACCCT | + |
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Preference number: 5 (lower is better) Translates to: SMITLGCPCVIKAWSKRWSFHPQ*GVHDYP Trigger: AGGGTAATCATGGACCCCCAATTGTGGGTGAAAGGA...CCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CAA 90 bp | TCCATGATTACCCTTGGATGTCCATGTGTGATCAAGGCTTGGTCAAAAAGATGGAGCTATGGTGAACATTaGGAAGAGAGGTCTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SMITLGCPCVIKAWSKRWSYGEH*EERSQF Trigger: GAACTGAGACCTCTCTTCCAAATGTTCACCATAGCT...CCATCTTTTTGACCAAGCCTTGATCACACATGGACATCCAAGGGTAATCATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS-3UTR CAA 90 bp | CAGATGCAAAGATTTAGAATTTTGATCATGACCACTTATGCTGCCATGAAGACAATGTGTGATCAAGGCTaGGTCAAAAAGATGGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: QMQRFRILIMTTYAAMKTMCDQG*VKKMGL Trigger: TAGACCCATCTTTTTGACCAAGCCTTGATCACACAT...TGTCTTCATGGCAGCATAAGTGGTCATGATCAAAATTCTAAATCTTTGCATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS CCA 72 bp | CTCAAGGGTGTGGGAGATGTCGCAGGAACTCGCCTGTaGTCTTCATTGGATGGAATGCAGCAAGCTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LKGVGDVAGTRL*SSLDGMQQARR Trigger: TCTTCGAGCTTGCTGCATTCCATCCAATGAAGACCACAGGCGAGTTCCTGCGACATCTCCCACACCCTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS CAA 72 bp | GTGGGAGATGTCGCAGGAACTCGCCTGTGGTCTTCATaGGATGGAATGCAGCAAGCTCGAAGATTTTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: VGDVAGTRLWSS*DGMQQARRFLH Trigger: ATGCAAAAATCTTCGAGCTTGCTGCATTCCATCCAATGAAGACCACAGGCGAGTTCCTGCGACATCTCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS CAA 90 bp | CTCAAGGGTGTGGGAGATGTCGCAGGAACTCGCCTGTGGTCTTCATaGGATGGAATGCAGCAAGCTCGAAGATTTTTGCATGTATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LKGVGDVAGTRLWSS*DGMQQARRFLHVSF Trigger: GAAAGATACATGCAAAAATCTTCGAGCTTGCTGCATTCCATCCAATGAAGACCACAGGCGAGTTCCTGCGACATCTCCCACACCCTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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| CDS GCA 72 bp | TCGCAGGAACTCGCCTGTGGTCTTCATTGGATGGAATaGAGCAAGCTCGAAGATTTTTGCATGTATCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SQELACGLHWME*SKLEDFCMYLS Trigger: TGAAAGATACATGCAAAAATCTTCGAGCTTGCTGCATTCCATCCAATGAAGACCACAGGCGAGTTCCTGCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000253381.3 |
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