Pregenerated sensors for DEFB110 (Homo sapiens)

Ensembl gene IDs: ENSG00000203970

Ensembl transcript IDs: ENST00000371148.3

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR TCA 90 bp	GACACACACGCCTTGAAGGATGTGCTGGGAAAACTTAATAACGCTGGTCTCTCTTGCTGCAAGCAGCAATaGGTTCCAGGTCTTATGCAG	+
Preference number: 4 (lower is better) Translates to: DTHALKDVLGKLNNAGLSCCKQQ*VPGLMQ Trigger: CTGCATAAGACCTGGAACTCATTGCTGCTTGCAGCA...AGAGAGACCAGCGTTATTAAGTTTTCCCAGCACATCCTTCAAGGCGTGTGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371148.3
CDS-3UTR TCA 90 bp	TATTTAGTTCTTGTGTATTATAGAGACACACACGCCTTGAAGGATGTGCTGGGAGAGACACACACGCCTTaGAGGATGTGCTGGGAAAAC	+
Preference number: 4 (lower is better) Translates to: YLVLVYYRDTHALKDVLGETHTP*RMCWEN Trigger: GTTTTCCCAGCACATCCTTCAAGGCGTGTGTGTCTC...TCCCAGCACATCCTTCAAGGCGTGTGTGTCTCTATAATACACAAGAACTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371148.3
3UTR CAA 72 bp	TATTTAGTTCTTGTGTATTATAGAGACACACACGCCTaGAAGGATGTGCTGGGAAAACTTAATAACGCTGGT	+
Preference number: 4 (lower is better) Translates to: YLVLVYYRDTHA*KDVLGKLNNAG Trigger: ACCAGCGTTATTAAGTTTTCCCAGCACATCCTTCAAGGCGTGTGTGTCTCTATAATACACAAGAACTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371148.3
CDS-3UTR CAA 90 bp	TATAGAGACACACACGCCTTGAAGGATGTGCTGGGAAAACTTAATAACGCTGGTCGCTGGTCTCTCTTCTaGGAGCTTGTGACTCTTTTC	+
Preference number: 5 (lower is better) Translates to: YRDTHALKDVLGKLNNAGRWSLF*ELVTLF Trigger: GAAAAGAGTCACAAGCTCCAAGAAGAGAGACCAGCG...ACCAGCGTTATTAAGTTTTCCCAGCACATCCTTCAAGGCGTGTGTGTCTCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371148.3
CDS TCA 90 bp	GTGCTGGGAAAACTTAATAACGCTGGTCTCTCTTCTTGGAGCTTGTaGCTCTTTTCTTCTGTCATCGTTACTGCTGCAAGCAGCAATGAG	+
Preference number: 5 (lower is better) Translates to: VLGKLNNAGLSSWSL*LFSSVIVTAASSNE Trigger: CTCATTGCTGCTTGCAGCAGTAACGATGACAGAAGAAAAGAGTCACAAGCTCCAAGAAGAGAGACCAGCGTTATTAAGTTTTCCCAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371148.3
CDS-3UTR CAA 90 bp	TATTTAGTTCTTGTGTATTATAGAGACACACACGCCTTGAAGGATGTGCTGGGAAGAGACACACACGCCTaGAAGGATGTGCTGGGAAAA	+
Preference number: 5 (lower is better) Translates to: YLVLVYYRDTHALKDVLGRDTHA*KDVLGK Trigger: TTTTCCCAGCACATCCTTCAAGGCGTGTGTGTCTCT...TCCCAGCACATCCTTCAAGGCGTGTGTGTCTCTATAATACACAAGAACTAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371148.3
CDS-3UTR CAA 90 bp	TATTATAGAGACACACACGCCTTGAAGGATGTGCTGGGAAAACTTAATAACGCTTCAGGATATTTCTTTTaGGCTGGTAAAATTGTGACC	+
Preference number: 5 (lower is better) Translates to: YYRDTHALKDVLGKLNNASGYFF*AGKIVT Trigger: GGTCACAATTTTACCAGCCAAAAAGAAATATCCTGA...AGCGTTATTAAGTTTTCCCAGCACATCCTTCAAGGCGTGTGTGTCTCTATAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371148.3
CDS GCA 72 bp	CATGACACTGATTTTTACATTGACCATTACCTATTCTaGACTCTCTCCTCAAGTCCAAGCTACCATACTCAG	+
Preference number: 6 (lower is better) Translates to: HDTDFYIDHYLF*TLSSSPSYHTQ Trigger: CTGAGTATGGTAGCTTGGACTTGAGGAGAGAGTGCAGAATAGGTAATGGTCAATGTAAAAATCAGTGTCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371148.3

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