Pregenerated sensors for DEFB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164825

Ensembl transcript IDs: ENST00000297439.4, ENST00000642865.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCATTTCACTTCTGCGTCATTTCTTCTGGTCACTCCCAGCTCACTTaGAGCACTTGGCCTTCCCTCTGTAACAGGTGCCTTGAATTTTGG	+
Preference number: 5 (lower is better) Translates to: SFHFCVISSGHSQLT*STWPSLCNRCLEFW Trigger: CCAAAATTCAAGGCACCTGTTACAGAGGGAAGGCCAAGTGCTGCAAGTGAGCTGGGAGTGACCAGAAGAAATGACGCAGAAGTGAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297439.4 ENST00000642865.2
CDS GCA 72 bp	TTCTGCGTCATTTCTTCTGGTCACTCCCAGCTCACTTaGAGCACTTGGCCTTCCCTCTGTAACAGGTGCCTT	+
Preference number: 6 (lower is better) Translates to: FCVISSGHSQLT*STWPSLCNRCL Trigger: AAGGCACCTGTTACAGAGGGAAGGCCAAGTGCTGCAAGTGAGCTGGGAGTGACCAGAAGAAATGACGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297439.4 ENST00000642865.2
CDS CAA 72 bp	CTTGCAGCACTTGGCCTTCCCTCTGTAACAGGTGCCTaGAATTTTGGTAAAGATCGGGCAGGCAGAATAGAG	+
Preference number: 6 (lower is better) Translates to: LAALGLPSVTGA*NFGKDRAGRIE Trigger: CTCTATTCTGCCTGCCCGATCTTTACCAAAATTCAAGGCACCTGTTACAGAGGGAAGGCCAAGTGCTGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297439.4 ENST00000642865.2
CDS CAA 90 bp	GGTGCCTTGAATTTTGGTAAAGATCGGGCAGGCAGAATAGAGACATaGCCCTCCACTGCTGACGCAATTGTAATGATCAGATCTGTGGCC	+
Preference number: 6 (lower is better) Translates to: GALNFGKDRAGRIET*PSTADAIVMIRSVA Trigger: GGCCACAGATCTGATCATTACAATTGCGTCAGCAGTGGAGGGCAATGTCTCTATTCTGCCTGCCCGATCTTTACCAAAATTCAAGGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297439.4 ENST00000642865.2
CDS CAA 72 bp	AATTTTGGTAAAGATCGGGCAGGCAGAATAGAGACATaGCCCTCCACTGCTGACGCAATTGTAATGATCAGA	+
Preference number: 6 (lower is better) Translates to: NFGKDRAGRIET*PSTADAIVMIR Trigger: TCTGATCATTACAATTGCGTCAGCAGTGGAGGGCAATGTCTCTATTCTGCCTGCCCGATCTTTACCAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297439.4 ENST00000642865.2

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