Pregenerated sensors for DEFA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000164821Ensembl transcript IDs: ENST00000297435.3, ENST00000642522.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACATGCCTGGAGTGGGCCTaGCCGGACCTGGAGGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTCLEWA*PDLEGY Trigger: GTAGCCCTCCAGGTCCGGGCAGGCCCACTCCAGGCA...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR GCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGCCTGGAGTGGGCCTaGCCGGACCTGGAGGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSCLEWA*PDLEGY Trigger: GTAGCCCTCCAGGTCCGGGCAGGCCCACTCCAGGCA...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTACCTCTTGCCTGGAGTaGGCCTGCCCGGACCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSTSCLE*ACPDLE Trigger: CTCCAGGTCCGGGCAGGCCCACTCCAGGCAAGAGGT...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACAACCTCTTGCCTGGAGTaGGCCTGCCCGGACCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTTSCLE*ACPDLE Trigger: CTCCAGGTCCGGGCAGGCCCACTCCAGGCAAGAGGT...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTGGCCCACGCTGCTCCTaGCCTGGAGCCTCATCACCT | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSGPRCS*PGASSP Trigger: AGGTGATGAGGCTCCAGGCCAGGAGCAGCGTGGGCC...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACAGGCCCACGCTGCTCCTaGCCTGGAGCCTCATCACCT | + |
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Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTGPRCS*PGASSP Trigger: AGGTGATGAGGCTCCAGGCCAGGAGCAGCGTGGGCC...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR GCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTAGCCTCATCACCTCTTaGCTGGAGTGGGCCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSSLITS*LEWACP Trigger: CGGGCAGGCCCACTCCAGGCAAGAGGTGATGAGGCT...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR GCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACATCTTCTGGCCCACGCTaGTCCTGGCCTGGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTSSGPR*SWPGAS Trigger: TGAGGCTCCAGGCCAGGAGCAGCGTGGGCCAGAAGA...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR GCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTCTTCTGGCCCACGCTaGTCCTGGCCTGGAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSSSGPR*SWPGAS Trigger: TGAGGCTCCAGGCCAGGAGCAGCGTGGGCCAGAAGA...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACATCATCACCTCTTGCCTaGAGTGGGCCTGCCCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTSSPLA*SGPART Trigger: GGTCCGGGCAGGCCCACTCCAGGCAAGAGGTGATGA...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTGGGCCTGCCCGGACCTaGAGGGCTACCAAGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSGPART*RATKRI Trigger: TATTCTCTTGGTAGCCCTCCAGGTCCGGGCAGGCCC...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR TCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTCCTCATGGCTGGGGTaGCAGATCCTCAAGCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSSSWLG*QILKLG Trigger: GCCTAGCTTGAGGATCTGTCACCCCAGCCATGAGGA...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR TCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACATCCTCATGGCTGGGGTaGCAGATCCTCAAGCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTSSWLG*QILKLG Trigger: GCCTAGCTTGAGGATCTGTCACCCCAGCCATGAGGA...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR TCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTATGGCGTTCCCAGCATaGCATTCTCTTGGACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSMAFPA*HSLGQQ Trigger: CTGCTGTCCAAGAGAATGTCATGCTGGGAACGCCAT...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR TCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACAATGGCGTTCCCAGCATaGCATTCTCTTGGACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTMAFPA*HSLGQQ Trigger: CTGCTGTCCAAGAGAATGTCATGCTGGGAACGCCAT...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR TCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACAAACTCACACCACCAATaGGGCAGTTCCCAACACGAA | + |
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Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTNSHHQ*GSSQHE Trigger: TTCGTGTTGGGAACTGCCTCATTGGTGGTGTGAGTT...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACAGATAATCCTCATGGCTaGGGTGACAGATCCTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTDNPHG*GDRSSS Trigger: GCTTGAGGATCTGTCACCCCAGCCATGAGGATTATC...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTGATAATCCTCATGGCTaGGGTGACAGATCCTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSDNPHG*GDRSSS Trigger: GCTTGAGGATCTGTCACCCCAGCCATGAGGATTATC...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTGAAATAGATATGTCCTaGTCTTCTGGCCCACGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSEIDMS*SSGPRC Trigger: GCAGCGTGGGCCAGAAGACCAGGACATATCTATTTC...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACAGAAATAGATATGTCCTaGTCTTCTGGCCCACGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTEIDMS*SSGPRC Trigger: GCAGCGTGGGCCAGAAGACCAGGACATATCTATTTC...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR TCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTGTTGAGCCTGAAACCTaGAGAGCAGAGCTTTTATCC | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSVEPET*RAELLS Trigger: GGATAAAAGCTCTGCTCTTCAGGTTTCAGGCTCAAC...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR TCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACAGTTGAGCCTGAAACCTaGAGAGCAGAGCTTTTATCC | + |
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Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTVEPET*RAELLS Trigger: GGATAAAAGCTCTGCTCTTCAGGTTTCAGGCTCAAC...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR GCA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACAAGAGCTTTTATCCCATaGAAAGGAAATAGATATGTC | + |
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Preference number: 4 (lower is better) Translates to: CEANTTDDGVPSMTFSWTRAFIP*KGNRYV Trigger: GACATATCTATTTCCTTTGCATGGGATAAAAGCTCT...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR GCA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTAGAGCTTTTATCCCATaGAAAGGAAATAGATATGTC | + |
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Preference number: 4 (lower is better) Translates to: EACEANTTDDGVPSMTFSRAFIP*KGNRYV Trigger: GACATATCTATTTCCTTTGCATGGGATAAAAGCTCT...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CAA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTGAGCCTCATCACCTCTaGCCTGGAGTGGGCCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: EACEANTTDDGVPSMTFSEPHHL*PGVGLP Trigger: GGGCAGGCCCACTCCAGGCAAGAGGTGATGAGGCTC...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CAA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTAGACCATGCCCCTTGTaGAGCCTGAAACCTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: EACEANTTDDGVPSMTFSRPCPL*SLKPEE Trigger: CTCTTCAGGTTTCAGGCTCAACAAGGGGCATGGTCT...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CAA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACAAGACCATGCCCCTTGTaGAGCCTGAAACCTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: CEANTTDDGVPSMTFSWTRPCPL*SLKPEE Trigger: CTCTTCAGGTTTCAGGCTCAACAAGGGGCATGGTCT...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CAA 90 bp | GAAGCATGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTAGCAGACCATGCCCCTaGTTGAGCCTGAAACCTGAA | + |
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Preference number: 5 (lower is better) Translates to: EACEANTTDDGVPSMTFSSRPCP*LSLKPE Trigger: TTCAGGTTTCAGGCTCAACAAGGGGCATGGTCTGCT...AGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACATGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CAA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACAAGCAGACCATGCCCCTaGTTGAGCCTGAAACCTGAA | + |
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Preference number: 5 (lower is better) Translates to: CEANTTDDGVPSMTFSWTSRPCP*LSLKPE Trigger: TTCAGGTTTCAGGCTCAACAAGGGGCATGGTCTGCT...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS-3UTR CAA 90 bp | TGTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATGACATTCTCTTGGACACAGCATGACATTCTCTaGGACAGCAGAACGTTAATC | + |
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Preference number: 5 (lower is better) Translates to: CEANTTDDGVPSMTFSWTQHDIL*DSRTLI Trigger: GATTAACGTTCTGCTGTCCAAGAGAATGTCATGCTG...TGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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| CDS TCA 72 bp | GTGAAGCTAACACCACCGATGATGGCGTTCCCAGCATaGCATTCTCTTGGACAGCAGAACGTTAATCGACAC | + |
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Preference number: 6 (lower is better) Translates to: VKLTPPMMAFPA*HSLGQQNVNRH Trigger: GTGTCGATTAACGTTCTGCTGTCCAAGAGAATGTCATGCTGGGAACGCCATCATCGGTGGTGTTAGCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000297435.3 ENST00000642522.2 |
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