RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DEDD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000160570

Ensembl transcript IDs: ENST00000336034.8, ENST00000593561.5, ENST00000593804.5, ENST00000595337.5, ENST00000596251.6, ENST00000598090.5, ENST00000598200.1, ENST00000598415.5, ENST00000598727.5, ENST00000600559.5, ENST00000601135.5, ENST00000602075.5, ENST00000602201.1

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCACAGAGGCAGGGCCAGGTGGCGGAGTCCAACAGACCTTGAGGTaGGTCCCAGCTCTGCCACTCTCTAAGCTGTGGGGCCTTGGGCAT +
Preference number: 1 (lower is better)
Translates to: ATEAGPGGGVQQTLR*VPALPLSKLWGLGH
Trigger: ATGCCCAAGGCCCCACAGCTTAGAGAGTGGCAGAGCTGGGACTCACCTCAAGGTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598727.5
3UTR CCA 90 bp GGAAACTCAGCTGGAAATGGTTTAGGCCTCAGAGCCCACATCCTGTaGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGT +
Preference number: 1 (lower is better)
Translates to: GNSAGNGLGLRAHIL*EGLSRGLLSRSCRS
Trigger: ACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACAGGATGTGGGCTCTGAGGCCTAAACCATTTCCAGCTGAGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR CCA 90 bp GGTGAGCAGGCCCCATGTGCACCCCAGCTCCAGTGCCCACTGATGTaGCTGAAGCCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGA +
Preference number: 1 (lower is better)
Translates to: GEQAPCAPQLQCPLM*LKPRLVVVKLEVLR
Trigger: TCTCAGGACCTCTAATTTGACCACAACCAACCTGGGCTTCAGCCACATCAGTGGGCACTGGAGCTGGGGTGCACATGGGGCCTGCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR GCA 90 bp ATGTGTGGGCAAGGTGAGCAGGCCCCATGTGCACCCCAGCTCCAGTaGCCACTGATGTGGCTGAAGCCCAGGTTGGTTGTGGTCAAATTA +
Preference number: 1 (lower is better)
Translates to: MCGQGEQAPCAPQLQ*PLMWLKPRLVVVKL
Trigger: TAATTTGACCACAACCAACCTGGGCTTCAGCCACATCAGTGGGCACTGGAGCTGGGGTGCACATGGGGCCTGCTCACCTTGCCCACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR CCA 90 bp AGGTGGCTGTTTACTGGTTTTGGCCCCATGTGCAACAGTAGGCCTTaGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGAC +
Preference number: 1 (lower is better)
Translates to: RWLFTGFGPMCNSRP*YDAAITLPCDTPGD
Trigger: GTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCACATGGGGCCAAAACCAGTAAACAGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR GCA 90 bp GCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTGACTaGATCCTTGACTCCAGTAAGCAACTGGCCATGACCTCAATCAAT +
Preference number: 1 (lower is better)
Translates to: AFRPSCLYPDDQILD*ILDSSKQLAMTSIN
Trigger: ATTGATTGAGGTCATGGCCAGTTGCTTACTGGAGTCAAGGATGCAGTCAAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
3UTR-3UTR CCA 90 bp CCCCAGGCCCTCCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGACTCAATCAATGTGGGTaGGAGAGCAGGGGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: PQALPWHSDPAVSTQTTRLNQCG*ESRGLG
Trigger: TCCCAGCCCCCTGCTCTCCCACCCACATTGATTGAG...TCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGGAGGGCCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598727.5
3UTR-3UTR GCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCGGCCAAAGAAGTGTGTaGTGGGAAGCAGGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: EGEESQVCKLKLGRALAGGQRSV*WEAGQG
Trigger: GCCCTGGCCTGCTTCCCAGCACACACTTCTTTGGCC...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CCA 90 bp GGCCCTCCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTAGAGGCAGGGCCAGGTaGCGGAGTCCAACAGACCTT +
Preference number: 2 (lower is better)
Translates to: GPPMAFRPSCLYPDDQILRGRAR*RSPTDL
Trigger: AAGGTCTGTTGGACTCCGCCACCTGGCCCTGCCTCT...AAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGGAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
3UTR-3UTR CCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCCCGGAGACTTGGAGGTaGGATCAATCCTGCCAGTCC +
Preference number: 2 (lower is better)
Translates to: EGEESQVCKLKLGRALAGPETWR*DQSCQS
Trigger: GGACTGGCAGGATTGATCCCACCTCCAAGTCTCCGG...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR GCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAGGCTGTCAAGGGGCCTaGTGTCCCGGTCCTGTCGCA +
Preference number: 2 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQGCQGA*CPGPVA
Trigger: TGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCC...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR CAA 90 bp TGTGCACCCCAGCTCCAGTGCCCACTGATGTGGCTGAAGCCCAGGTaGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGC +
Preference number: 2 (lower is better)
Translates to: CAPQLQCPLMWLKPR*VVVKLEVLREKPLG
Trigger: GCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGGCTTCAGCCACATCAGTGGGCACTGGAGCTGGGGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR GCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGGGCTGTCAAGGGGCCTaGTGTCCCGGTCCTGTCGCA +
Preference number: 2 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVGCQGA*CPGPVA
Trigger: TGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCC...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR GCA 90 bp CCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTGACTGCAGGTGAGTCCCAGCTCTaGCACTCTCTAAGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: PWHSDPAVSTQTTRSLTAGESQL*HSLSCG
Trigger: CCCACAGCTTAGAGAGTGGCAGAGCTGGGACTCACC...TGCAGTCAAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
3UTR-3UTR CCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAACCTCCCAGGAGAAGGTaGCCCGGAGACTTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQPPRRR*PGDLEV
Trigger: CACCTCCAAGTCTCCGGGCCACCTTCTCCTGGGAGG...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGGGTGGCCCGGAGACTTaGAGGTGGGATCAATCCTGC +
Preference number: 2 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVGGPET*RWDQSC
Trigger: GCAGGATTGATCCCACCTCCAAGTCTCCGGGCCACC...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCACCTCCCAGGAGAAGGTaGCCCGGAGACTTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPPPRRR*PGDLEV
Trigger: CACCTCCAAGTCTCCGGGCCACCTTCTCCTGGGAGG...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAAGAGCCCACATCCTGTaGGAGGGGCTGTCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPRAHIL*EGLSRG
Trigger: GCCCCTTGACAGCCCCTCCCACAGGATGTGGGCTCT...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR GCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGGGCCAAAGAAGTGTGTaGTGGGAAGCAGGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVGQRSV*WEAGQG
Trigger: GCCCTGGCCTGCTTCCCAGCACACACTTCTTTGGCC...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGCCGGAGACTTGGAGGTaGGATCAATCCTGCCAGTCC +
Preference number: 2 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVPETWR*DQSCQS
Trigger: GGACTGGCAGGATTGATCCCACCTCCAAGTCTCCGG...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR TCA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTGAGTGTGTGCACCTGTaGCAGTGCAGACAGCCCAAG +
Preference number: 2 (lower is better)
Translates to: GCGQIRGPEREALRPKKCECVHL*QCRQPK
Trigger: CTTGGGCTGTCTGCACTGTCACAGGTGCACACACTC...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGCAGTGCCCACTGATGTaGCTGAAGCCCAGGTTGGTT +
Preference number: 2 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVQCPLM*LKPRLV
Trigger: AACCAACCTGGGCTTCAGCCACATCAGTGGGCACTG...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGAAACTCAGCTGGAAATaGTTTAGGCCTCAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVKLSWK*FRPQSP
Trigger: TGGGCTCTGAGGCCTAAACCATTTCCAGCTGAGTTT...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CCA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCTCCCAGGAGAAGGTaGCCCGGAGACTTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFPPRRR*PGDLEV
Trigger: CACCTCCAAGTCTCCGGGCCACCTTCTCCTGGGAGG...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
3UTR-3UTR CCA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTAGAGCCCACATCCTGTaGGAGGGGCTGTCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFRAHIL*EGLSRG
Trigger: GCCCCTTGACAGCCCCTCCCACAGGATGTGGGCTCT...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
3UTR-3UTR CCA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTGGTGGCCCGGAGACTTaGAGGTGGGATCAATCCTGC +
Preference number: 2 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFGGPET*RWDQSC
Trigger: GCAGGATTGATCCCACCTCCAAGTCTCCGGGCCACC...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
3UTR-3UTR TCA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTGTCAGGTCTGTAAATTaGAGCTGGGCAGGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFVRSVN*SWAGPW
Trigger: CCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGAC...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
3UTR-3UTR CCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCACCGGAGACTTGGAGGTaGGATCAATCCTGCCAGTCC +
Preference number: 2 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSPETWR*DQSCQS
Trigger: GGACTGGCAGGATTGATCCCACCTCCAAGTCTCCGG...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
3UTR-3UTR CCA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCAGTGCCCACTGATGTaGCTGAAGCCCAGGTTGGTT +
Preference number: 2 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFQCPLM*LKPRLV
Trigger: AACCAACCTGGGCTTCAGCCACATCAGTGGGCACTG...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
3UTR-3UTR CCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAAAACTCAGCTGGAAATaGTTTAGGCCTCAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSKLSWK*FRPQSP
Trigger: TGGGCTCTGAGGCCTAAACCATTTCCAGCTGAGTTT...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
3UTR CCA 72 bp CACCCAGGAGTGGTTGGCCACAGAGGCAGGGCCAGGTaGCGGAGTCCAACAGACCTTGAGGTGAGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: HPGVVGHRGRAR*RSPTDLEVSPS
Trigger: GCTGGGACTCACCTCAAGGTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTGGCCAACCACTCCTGGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
3UTR TCA 72 bp GCAGGGCCAGGTGGCGGAGTCCAACAGACCTTGAGGTaGGTCCCAGCTCTGCCACTCTCTAAGCTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: AGPGGGVQQTLR*VPALPLSKLWG
Trigger: GCCCCACAGCTTAGAGAGTGGCAGAGCTGGGACTCACCTCAAGGTCTGTTGGACTCCGCCACCTGGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598727.5
3UTR CCA 72 bp GCTGGAAATGGTTTAGGCCTCAGAGCCCACATCCTGTaGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCC +
Preference number: 3 (lower is better)
Translates to: AGNGLGLRAHIL*EGLSRGLLSRS
Trigger: GGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACAGGATGTGGGCTCTGAGGCCTAAACCATTTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR GCA 72 bp CAAGGTGAGCAGGCCCCATGTGCACCCCAGCTCCAGTaGCCACTGATGTGGCTGAAGCCCAGGTTGGTTGTG +
Preference number: 3 (lower is better)
Translates to: QGEQAPCAPQLQ*PLMWLKPRLVV
Trigger: CACAACCAACCTGGGCTTCAGCCACATCAGTGGGCACTGGAGCTGGGGTGCACATGGGGCCTGCTCACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CAA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGAGGTGGCCCGGAGACTaGGAGGTGGGATCAATCCTG +
Preference number: 3 (lower is better)
Translates to: CQGACCPGPVAVLKDARVRWPGD*EVGSIL
Trigger: CAGGATTGATCCCACCTCCAAGTCTCCGGGCCACCT...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR TCA 72 bp GTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTaGCAGTCCTCTAGGGGTAGAGATGGTCGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: VPVLSQSSKMLE*QSSRGRDGRPP
Trigger: GGGAGGACGACCATCTCTACCCCTAGAGGACTGTCACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CAA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGAGGTGGCCCGGAGACTaGGAGGTGGGATCAATCCTG +
Preference number: 3 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVRWPGD*EVGSIL
Trigger: CAGGATTGATCCCACCTCCAAGTCTCCGGGCCACCT...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR-3UTR CAA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTAGGTGGCCCGGAGACTaGGAGGTGGGATCAATCCTG +
Preference number: 3 (lower is better)
Translates to: GCGQIRGPEREALRPKKCRWPGD*EVGSIL
Trigger: CAGGATTGATCCCACCTCCAAGTCTCCGGGCCACCT...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR GCA 72 bp CCAAGAAGGTGGCTGTTTACTGGTTTTGGCCCCATGTaGAACAGTAGGCCTTGGTATGATGCTGCCATAACA +
Preference number: 3 (lower is better)
Translates to: PRRWLFTGFGPM*NSRPWYDAAIT
Trigger: TGTTATGGCAGCATCATACCAAGGCCTACTGTTGCACATGGGGCCAAAACCAGTAAACAGCCACCTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CCAGGCCACCCAGGAGTGGTTGGCCACAGAGGCAGGGCCAGGTGGCGGAGTCCACTGGCGGGCTCTGACTaGTGCTGGGGTGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGHPGVVGHRGRARWRSPLAGSD*CWGAAG
Trigger: CCCAGCCGCACCCCAGCAGCAGTCAGAGCCCGCCAG...TGGACTCCGCCACCTGGCCCTGCCTCTGTGGCCAACCACTCCTGGGTGGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAACGCTTGCGCGCCAGGTaGGGCAGCAGGTCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKRLRAR*GSRSWR
Trigger: CCGCCACGACCTGCTGCCGCACCTGGCGCGCAAGCG...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAATGCGGCAGCAGGTCGTaGCGGGCCAGCACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKCGSRS*RASTRR
Trigger: CCTGCGCGTGCTGGCCCGCCACGACCTGCTGCCGCA...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GGCCACAGAGGCAGGGCCAGGTGGCGGAGTCCAACAGACCTTGAGGTGAGTCCCGGCTCTGACTGCTGCTaGGGTGCGGCTGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GHRGRARWRSPTDLEVSPGSDCC*GAAGAP
Trigger: AGGGGCCCCAGCCGCACCCCAGCAGCAGTCAGAGCC...GGGACTCACCTCAAGGTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGGAGCTCTAGGCCGCTaGGGGCCCGGGCTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKGALGR*GPGLSL
Trigger: GAGGCTTAGCCCGGGCCCGCAGCGGCCTAGAGCTCC...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CCCCAGGCCCTCCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGACGCTTGCGCGCCAGGTaGGGCAGCAGGTCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PQALPWHSDPAVSTQTTRRLRAR*GSRSWR
Trigger: CCGCCACGACCTGCTGCCGCACCTGGCGCGCAAGCG...TCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGGAGGGCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR TCA 90 bp CAGCCCCCAGGCCCTCCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACGATTCTGGCGTCCGATaGCTCCTGGGCGACGGCCGC +
Preference number: 4 (lower is better)
Translates to: QPPGPPMAFRPSCLYPDDDSGVR*LLGDGR
Trigger: GCGGCCGTCGCCCAGGAGTCATCGGACGCCAGAATC...GTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGGAGGGCCTGGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAATTGCTCTCGTCGCACTaGCCGCGGCGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKLLSSH*PRRSSS
Trigger: GGAGCTGGAGCGCCGCGGGCAGTGCGACGAGAGCAA...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GTGGTTGGCCACAGAGGCAGGGCCAGGTGGCGGAGTCCAACAGACCTTGAGGTGGCGTCCGATGACTCCTaGGCGACGGCCGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: VVGHRGRARWRSPTDLEVASDDS*ATAAAT
Trigger: AGTGGCTGCGGCCGTCGCCCAGGAGTCATCGGACGC...CACCTCAAGGTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTGGCCAACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp AGGCCACCCAGGAGTGGTTGGCCACAGAGGCAGGGCCAGGTGGCGGAGTCCAACCCCCAGGCCCTCCCATaGCATTCAGACCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RPPRSGWPQRQGQVAESNPQALP*HSDPAV
Trigger: GACAGCTGGGTCTGAATGCCATGGGAGGGCCTGGGG...GTTGGACTCCGCCACCTGGCCCTGCCTCTGTGGCCAACCACTCCTGGGTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAAGCACGCGCAGGAGTTaGCCCAGCAGCCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKSTRRS*PSSRRL
Trigger: CAACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCT...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCTGCGGCAGCAGGTCGTaGCGGGCCAGCACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGCGSRS*RASTRR
Trigger: CCTGCGCGTGCTGGCCCGCCACGACCTGCTGCCGCA...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GCAACTGGCCATGACCTCAATCAATGTGGGTGGGAGAGCAGGGGGCTGGGAGGAGCGTTCTGGAGACACTaGCCGGCGCCGCTTGCGCGC +
Preference number: 4 (lower is better)
Translates to: ATGHDLNQCGWESRGLGGAFWRH*PAPLAR
Trigger: GCGCGCAAGCGGCGCCGGCCAGTGTCTCCAGAACGC...TCCTCCCAGCCCCCTGCTCTCCCACCCACATTGATTGAGGTCATGGCCAGTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCCTCTCCGCCGCCGTCTaGCACCACCACTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGLSAAV*HHHWAG
Trigger: GCCGGCCCAGTGGTGGTGCCAGACGGCGGCGGAGAG...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAATCGCACTCGGTCAGTTaGCCGCCCACCACCTCGAAC +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKSHSVS*PPTTSN
Trigger: GTTCGAGGTGGTGGGCGGGCAACTGACCGAGTGCGA...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGCCAAACACGTCCAGCTaGCGCGCCAGCGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVPNTSS*RASAWG
Trigger: GCCCCAGGCGCTGGCGCGGCAGCTGGACGTGTTTGG...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAAGCACTGCGGTGGCCTaGCCAAACACGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKSTAVA*PNTSSC
Trigger: GCAGCTGGACGTGTTTGGGCAGGCCACCGCAGTGCT...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGGCGTTCTGGAGACACTaGCCGGCGCCGCTTGCGCGC +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVAFWRH*PAPLAR
Trigger: GCGCGCAAGCGGCGCCGGCCAGTGTCTCCAGAACGC...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp CCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTGACTGCGTCTGGCACCACCACTaGGCCGGCCCCGACTCCGCC +
Preference number: 4 (lower is better)
Translates to: PMAFRPSCLYPDDQILDCVWHHH*AGPDSA
Trigger: GGCGGAGTCGGGGCCGGCCCAGTGGTGGTGCCAGAC...GCAGTCAAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAAGCGCAGCACTGCGGTaGCCTGCCCAAACACGTCCA +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKSAALR*PAQTRP
Trigger: TGGACGTGTTTGGGCAGGCCACCGCAGTGCTGCGCT...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGAGAGCCCAGGTCCCTTaGGCGCAGCACTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVRAQVP*AQHCGG
Trigger: GCCACCGCAGTGCTGCGCTCAAGGGACCTGGGCTCT...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCAGAGCCCAGGTCCCTTaGGCGCAGCACTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGRAQVP*AQHCGG
Trigger: GCCACCGCAGTGCTGCGCTCAAGGGACCTGGGCTCT...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TCAGCCCCCAGGCCCTCCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGATCGCACTCGGTCAGTTaGCCGCCCACCACCTCGAAC +
Preference number: 4 (lower is better)
Translates to: SAPRPSHGIQTQLSLPRRSHSVS*PPTTSN
Trigger: GTTCGAGGTGGTGGGCGGGCAACTGACCGAGTGCGA...TCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGGAGGGCCTGGGGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCTTGCTCTCGTCGCACTaGCCGCGGCGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGLLSSH*PRRSSS
Trigger: GGAGCTGGAGCGCCGCGGGCAGTGCGACGAGAGCAA...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCCCAGCAGCCGCAGGTTaGTCTCGTCGCACTGCCCGC +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGPAAAG*SRRTAR
Trigger: GCGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGG...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGCCAGCAGCCGCAGGTTaGTCTCGTCGCACTGCCCGC +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVPAAAG*SRRTAR
Trigger: GCGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGG...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp GGCCCTCCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTCCAGCAGCCGCAGGTTaGTCTCGTCGCACTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GPPMAFRPSCLYPDDQILPAAAG*SRRTAR
Trigger: GCGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGG...AAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGGAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp CCAGGCCACCCAGGAGTGGTTGGCCACAGAGGCAGGGCCAGGTGGCGGAGTCCAGAGAATTTGCAGAACTaGTTGACTGCCGACGGCGAC +
Preference number: 4 (lower is better)
Translates to: PGHPGVVGHRGRARWRSPENLQN*LTADGD
Trigger: GTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATTCTC...TGGACTCCGCCACCTGGCCCTGCCTCTGTGGCCAACCACTCCTGGGTGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCCGGGATGCCACGCCCTaGTCCAAGGCTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGRDATP*SKAGPC
Trigger: GCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCG...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGGCCAAAGAAGTGTGTaGTGGGAAGCAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKGQRSV*WEAGQG
Trigger: GCCCTGGCCTGCTTCCCAGCACACACTTCTTTGGCC...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp CAGGAGTGGTTGGCCACAGAGGCAGGGCCAGGTGGCGGAGTCCAACAGACCTTGAACCCGGCCAGATTCTaGCGTCCGATGACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QEWLATEAGPGGGVQQTLNPARF*RPMTPG
Trigger: CCCAGGAGTCATCGGACGCCAGAATCTGGCCGGGTT...CAAGGTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTGGCCAACCACTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp CCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTGACTGCACTCTCCGCCGCCGTCTaGCACCACCACTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PWHSDPAVSTQTTRSLTALSAAV*HHHWAG
Trigger: GCCGGCCCAGTGGTGGTGCCAGACGGCGGCGGAGAG...TGCAGTCAAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGGTGGCCCGGAGACTTaGAGGTGGGATCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKGGPET*RWDQSC
Trigger: GCAGGATTGATCCCACCTCCAAGTCTCCGGGCCACC...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GCAACTGGCCATGACCTCAATCAATGTGGGTGGGAGAGCAGGGGGCTGGGAGGACAGGCCACCCAGGAGTaGTTGGCCACAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ATGHDLNQCGWESRGLGGQATQE*LATEAG
Trigger: CCCTGCCTCTGTGGCCAACCACTCCTGGGTGGCCTG...TCCTCCCAGCCCCCTGCTCTCCCACCCACATTGATTGAGGTCATGGCCAGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp CACCCAGGAGTGGTTGGCCACAGAGGCAGGGCCAGGTGGCGGAGTCCAACAGACCTCAATCAATGTGGGTaGGAGAGCAGGGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HPGVVGHRGRARWRSPTDLNQCG*ESRGLG
Trigger: TCCCAGCCCCCTGCTCTCCCACCCACATTGATTGAG...GTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTGGCCAACCACTCCTGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR TCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAATTTGCAGAACTGCTTaGCTGCCGACGGCGACGGCA +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKICRTA*LPTATA
Trigger: TGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAAT...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp AGTAAGCAACTGGCCATGACCTCAATCAATGTGGGTGGGAGAGCAGGGGGCTGGTTGCTCTCGTCGCACTaGCCGCGGCGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SKQLAMTSINVGGRAGGWLLSSH*PRRSSS
Trigger: GGAGCTGGAGCGCCGCGGGCAGTGCGACGAGAGCAA...CCAGCCCCCTGCTCTCCCACCCACATTGATTGAGGTCATGGCCAGTTGCTTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAATGCTCGCAGTACTCTaGTCGAACCCGGAGCCGGAT +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKMLAVL*SNPEPD
Trigger: ATCCGGCTCCGGGTTCGAGCAGAGTACTGCGAGCAT...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAATCCAAGGCTGGCCCATaGTCGCAGTACTCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKSKAGP*SQYSAR
Trigger: TCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGA...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCGGCTGTCAAGGGGCCTaGTGTCCCGGTCCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGGCQGA*CPGPVA
Trigger: TGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCC...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CACAGAGGCAGGGCCAGGTGGCGGAGTCCAACAGACCTTGAGGTGAGTCCCAGCGGTGAGTCCCAGCTCTaGCACTCTCTAAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: HRGRARWRSPTDLEVSPSGESQL*HSLSCG
Trigger: CCCACAGCTTAGAGAGTGGCAGAGCTGGGACTCACC...GCTGGGACTCACCTCAAGGTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAACCGGAGACTTGGAGGTaGGATCAATCCTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKPETWR*DQSCQS
Trigger: GGACTGGCAGGATTGATCCCACCTCCAAGTCTCCGG...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGTCGCACTCGGTCAGTTaGCCGCCCACCACCTCGAAC +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVSHSVS*PPTTSN
Trigger: GTTCGAGGTGGTGGGCGGGCAACTGACCGAGTGCGA...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TCCAGTAAGCAACTGGCCATGACCTCAATCAATGTGGGTGGGAGAGCAGGGGGCAGCACGCGCAGGAGTTaGCCCAGCAGCCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SSKQLAMTSINVGGRAGGSTRRS*PSSRRL
Trigger: CAACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCT...GCCCCCTGCTCTCCCACCCACATTGATTGAGGTCATGGCCAGTTGCTTACTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGCGCTTGCGCGCCAGGTaGGGCAGCAGGTCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVRLRAR*GSRSWR
Trigger: CCGCCACGACCTGCTGCCGCACCTGGCGCGCAAGCG...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCAGCACTGCGGTGGCCTaGCCAAACACGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGSTAVA*PNTSSC
Trigger: GCAGCTGGACGTGTTTGGGCAGGCCACCGCAGTGCT...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGACGCCCCGCAGGGCCTaGAGCAGGGCGCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVTPRRA*SRAPLR
Trigger: CCTGAGTGGCGCCCTGCTGCAGGCCCTGCGGGGCGT...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAACGCCCCGCAGGGCCTaGAGCAGGGCGCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQTPRRA*SRAPLR
Trigger: CCTGAGTGGCGCCCTGCTGCAGGCCCTGCGGGGCGT...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAAGGTGGGATCAATCCTaGCAGTCCTGGATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKRWDQS*QSWIRR
Trigger: CCTCCTGATCCAGGACTGGCAGGATTGATCCCACCT...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAACTCTCCGCCGCCGTCTaGCACCACCACTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQLSAAV*HHHWAG
Trigger: GCCGGCCCAGTGGTGGTGCCAGACGGCGGCGGAGAG...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCGCCCTGCTCCAAGGCTaGCCCATGCTCGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGALLQG*PMLAVL
Trigger: GAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGC...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGGCCCTGCTCCAAGGCTaGCCCATGCTCGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVALLQG*PMLAVL
Trigger: GAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGC...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCCCTCCCAGGAGAAGGTaGCCCGGAGACTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGPPRRR*PGDLEV
Trigger: CACCTCCAAGTCTCCGGGCCACCTTCTCCTGGGAGG...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGGCAGAACTGCTTGACTaGCGACGGCGACGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVAELLD*RRRRQL
Trigger: TAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGC...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp GGCCCTCCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTGCAGAACTGCTTGACTaGCGACGGCGACGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: GPPMAFRPSCLYPDDQILAELLD*RRRRQL
Trigger: TAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGC...AAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGGAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAGCGTTCTGGAGACACTaGCCGGCGCCGCTTGCGCGC +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQAFWRH*PAPLAR
Trigger: GCGCGCAAGCGGCGCCGGCCAGTGTCTCCAGAACGC...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGGTCTGGCACCACCACTaGGCCGGCCCCGACTCCGCC +
Preference number: 4 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVVWHHH*AGPDSA
Trigger: GGCGGAGTCGGGGCCGGCCCAGTGGTGGTGCCAGAC...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGTCTGGCACCACCACTaGGCCGGCCCCGACTCCGCC +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPVWHHH*AGPDSA
Trigger: GGCGGAGTCGGGGCCGGCCCAGTGGTGGTGCCAGAC...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCACTCTCCGCCGCCGTCTaGCACCACCACTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPLSAAV*HHHWAG
Trigger: GCCGGCCCAGTGGTGGTGCCAGACGGCGGCGGAGAG...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGGGCTCTGACTGCTGCTaGGGTGCGGCTGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVGSDCC*GAAGAP
Trigger: AGGGGCCCCAGCCGCACCCCAGCAGCAGTCAGAGCC...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCGGTGGCCCGGAGACTTaGAGGTGGGATCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGGGPET*RWDQSC
Trigger: GCAGGATTGATCCCACCTCCAAGTCTCCGGGCCACC...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAGATTCTGGCGTCCGATaGCTCCTGGGCGACGGCCGC +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQDSGVR*LLGDGR
Trigger: GCGGCCGTCGCCCAGGAGTCATCGGACGCCAGAATC...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR TCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCGAGTGTGTGCACCTGTaGCAGTGCAGACAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGECVHL*QCRQPK
Trigger: CTTGGGCTGTCTGCACTGTCACAGGTGCACACACTC...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCGTCAGGTCTGTAAATTaGAGCTGGGCAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGVRSVN*SWAGPW
Trigger: CCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGAC...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTCGCTTGCGCGCCAGGTaGGGCAGCAGGTCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GCGQIRGPEREALRPKKCRLRAR*GSRSWR
Trigger: CCGCCACGACCTGCTGCCGCACCTGGCGCGCAAGCG...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGCTGGCGGGCTCTGACTaGTGCTGGGGTGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVLAGSD*CWGAAG
Trigger: CCCAGCCGCACCCCAGCAGCAGTCAGAGCCCGCCAG...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCACCAAACACGTCCAGCTaGCGCGCCAGCGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPPNTSS*RASAWG
Trigger: GCCCCAGGCGCTGGCGCGGCAGCTGGACGTGTTTGG...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGATAGCTATAGCGTTCTaGAGACACTGGCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVIAIAF*RHWPAP
Trigger: CGGCGCCGGCCAGTGTCTCCAGAACGCTATAGCTAT...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGCTTCAGAGGAAGGTCTaGCGGGCTCTGACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVLQRKV*RALTAA
Trigger: AGCAGCAGTCAGAGCCCGCCAGACCTTCCTCTGAAG...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCACCAGCAGCCGCAGGTTaGTCTCGTCGCACTGCCCGC +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPPAAAG*SRRTAR
Trigger: GCGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGG...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCACGGGATGCCACGCCCTaGTCCAAGGCTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPRDATP*SKAGPC
Trigger: GCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCG...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp CCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTGACTGCAAGAGGCAGGGCCAGGTaGCGGAGTCCAACAGACCTT +
Preference number: 4 (lower is better)
Translates to: PWHSDPAVSTQTTRSLTARGRAR*RSPTDL
Trigger: AAGGTCTGTTGGACTCCGCCACCTGGCCCTGCCTCT...TGCAGTCAAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGTCGCACTCGGTCAGTTaGCCGCCCACCACCTCGAAC +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVSHSVS*PPTTSN
Trigger: GTTCGAGGTGGTGGGCGGGCAACTGACCGAGTGCGA...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CCCCAGGCCCTCCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATTGAAGAGCTGGAGGTaGCATAGCTATAGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: PQALPWHSDPAVSTQTTRLKSWR*HSYSVL
Trigger: CAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAA...TCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGGAGGGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp CCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTGACTGCAATAGCTATAGCGTTCTaGAGACACTGGCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PWHSDPAVSTQTTRSLTAIAIAF*RHWPAP
Trigger: CGGCGCCGGCCAGTGTCTCCAGAACGCTATAGCTAT...TGCAGTCAAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGGCCCTGCTCCAAGGCTaGCCCATGCTCGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVALLQG*PMLAVL
Trigger: GAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGC...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGAGGGCCCTGGCTGGCTaGAGATGTGTGGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVRALAG*RCVGKV
Trigger: CACCTTGCCCACACATCTCCAGCCAGCCAGGGCCCT...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGGGCCCTGGCTGGCTaGAGATGTGTGGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQRALAG*RCVGKV
Trigger: CACCTTGCCCACACATCTCCAGCCAGCCAGGGCCCT...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGCAGCCTCATCCACACTaGCCAGCAGGCGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVQPHPH*PAGEQP
Trigger: AGGCTGTTCGCCTGCTGGTCAGTGTGGATGAGGCTG...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp TCCAGTAAGCAACTGGCCATGACCTCAATCAATGTGGGTGGGAGAGCAGGGGGCGTGACCTTACCTCTCTaGGCCTGTTTCCCCATCACA +
Preference number: 4 (lower is better)
Translates to: SSKQLAMTSINVGGRAGGVTLPL*ACFPIT
Trigger: TGTGATGGGGAAACAGGCTCAGAGAGGTAAGGTCAC...GCCCCCTGCTCTCCCACCCACATTGATTGAGGTCATGGCCAGTTGCTTACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAGCAGAACTGCTTGACTaGCGACGGCGACGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQAELLD*RRRRQL
Trigger: TAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGC...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAGGCCAAAGAAGTGTGTaGTGGGAAGCAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQGQRSV*WEAGQG
Trigger: GCCCTGGCCTGCTTCCCAGCACACACTTCTTTGGCC...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGCACCCCCAAAGCCTTTaGATTCCCTTTCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVHPQSL*IPFPRR
Trigger: CCTTCTTGGAAAGGGAATGCAAAGGCTTTGGGGGTG...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGAACCCGGCCAGATTCTaGCGTCCGATGACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVNPARF*RPMTPG
Trigger: CCCAGGAGTCATCGGACGCCAGAATCTGGCCGGGTT...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR CCA 90 bp TCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTGACTGCATCCTTGACTCTTCAGAGGAAGGTCTaGCGGGCTCTGACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SDPAVSTQTTRSLTASLTLQRKV*RALTAA
Trigger: AGCAGCAGTCAGAGCCCGCCAGACCTTCCTCTGAAG...AGTCAAGGATGCAGTCAAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGCCTCCCAGGAGAAGGTaGCCCGGAGACTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVPPRRR*PGDLEV
Trigger: CACCTCCAAGTCTCCGGGCCACCTTCTCCTGGGAGG...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGAGAGCCCACATCCTGTaGGAGGGGCTGTCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVRAHIL*EGLSRG
Trigger: GCCCCTTGACAGCCCCTCCCACAGGATGTGGGCTCT...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCACAGCCTCATCCACACTaGCCAGCAGGCGAACAGCCT +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPQPHPH*PAGEQP
Trigger: AGGCTGTTCGCCTGCTGGTCAGTGTGGATGAGGCTG...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAGTCAGGTCTGTAAATTaGAGCTGGGCAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQVRSVN*SWAGPW
Trigger: CCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGAC...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp CCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTGACTGCGTAAGCAACTGGCCATaGCCTCAATCAATGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PMAFRPSCLYPDDQILDCVSNWP*PQSMWV
Trigger: CACCCACATTGATTGAGGTCATGGCCAGTTGCTTAC...GCAGTCAAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR GCA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGTTGAAGAGCTGGAGGTaGCATAGCTATAGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: CQGACCPGPVAVLKDARVLKSWR*HSYSVL
Trigger: CAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAA...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGCAGAACTGCTTGACTaGCGACGGCGACGGCAGCTA +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPAELLD*RRRRQL
Trigger: TAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGC...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGATGCTCGCAGTACTCTaGTCGAACCCGGAGCCGGAT +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVMLAVL*SNPEPD
Trigger: ATCCGGCTCCGGGTTCGAGCAGAGTACTGCGAGCAT...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAATCCAAGGCTGGCCCATaGTCGCAGTACTCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQSKAGP*SQYSAR
Trigger: TCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGA...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTAGCACTGCGGTGGCCTaGCCAAACACGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GCGQIRGPEREALRPKKCSTAVA*PNTSSC
Trigger: GCAGCTGGACGTGTTTGGGCAGGCCACCGCAGTGCT...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAAACCCGGCCAGATTCTaGCGTCCGATGACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPNPARF*RPMTPG
Trigger: CCCAGGAGTCATCGGACGCCAGAATCTGGCCGGGTT...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR CCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGCTTCAGAGGAAGGTCTaGCGGGCTCTGACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVLQRKV*RALTAA
Trigger: AGCAGCAGTCAGAGCCCGCCAGACCTTCCTCTGAAG...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCAAACTCAGCTGGAAATaGTTTAGGCCTCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGKLSWK*FRPQSP
Trigger: TGGGCTCTGAGGCCTAAACCATTTCCAGCTGAGTTT...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTAGGGCCCTGGCTGGCTaGAGATGTGTGGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GCGQIRGPEREALRPKKCRALAG*RCVGKV
Trigger: CACCTTGCCCACACATCTCCAGCCAGCCAGGGCCCT...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
3UTR CAA 72 bp CAGCTCCAGTGCCCACTGATGTGGCTGAAGCCCAGGTaGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QLQCPLMWLKPR*VVVKLEVLREK
Trigger: CTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGGCTTCAGCCACATCAGTGGGCACTGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGGAGTGTGTGCACCTGTaGCAGTGCAGACAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVECVHL*QCRQPK
Trigger: CTTGGGCTGTCTGCACTGTCACAGGTGCACACACTC...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGTCCAAGGCTGGCCCATaGTCGCAGTACTCTGCTCGA +
Preference number: 4 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVSKAGP*SQYSAR
Trigger: TCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGA...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCCAGGTGACATCCAAGTaGAAGTCTATGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: EGEESQVCKLKLGRALAGQVTSK*KSMFSS
Trigger: AGAGCTGAACATAGACTTGCACTTGGATGTCACCTG...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAATAGCTATAGCGTTCTaGAGACACTGGCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPIAIAF*RHWPAP
Trigger: CGGCGCCGGCCAGTGTCTCCAGAACGCTATAGCTAT...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAGTCTGGCACCACCACTaGGCCGGCCCCGACTCCGCC +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSVWHHH*AGPDSA
Trigger: GGCGGAGTCGGGGCCGGCCCAGTGGTGGTGCCAGAC...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCACTTCAGAGGAAGGTCTaGCGGGCTCTGACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPLQRKV*RALTAA
Trigger: AGCAGCAGTCAGAGCCCGCCAGACCTTCCTCTGAAG...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAACAGTGCCCACTGATGTaGCTGAAGCCCAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQQCPLM*LKPRLV
Trigger: AACCAACCTGGGCTTCAGCCACATCAGTGGGCACTG...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTATTTGCAGAACTGCTTaGCTGCCGACGGCGACGGCA +
Preference number: 4 (lower is better)
Translates to: GCGQIRGPEREALRPKKCICRTA*LPTATA
Trigger: TGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAAT...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAGAGAATTTGCAGAACTaGTTGACTGCCGACGGCGAC +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQENLQN*LTADGD
Trigger: GTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATTCTC...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCACTGGCGGGCTCTGACTaGTGCTGGGGTGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSLAGSD*CWGAAG
Trigger: CCCAGCCGCACCCCAGCAGCAGTCAGAGCCCGCCAG...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR CCA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTATAGCTATAGCGTTCTaGAGACACTGGCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GCGQIRGPEREALRPKKCIAIAF*RHWPAP
Trigger: CGGCGCCGGCCAGTGTCTCCAGAACGCTATAGCTAT...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCACAGTGCCCACTGATGTaGCTGAAGCCCAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPQCPLM*LKPRLV
Trigger: AACCAACCTGGGCTTCAGCCACATCAGTGGGCACTG...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR TCA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTGATTCTGGCGTCCGATaGCTCCTGGGCGACGGCCGC +
Preference number: 4 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFDSGVR*LLGDGR
Trigger: GCGGCCGTCGCCCAGGAGTCATCGGACGCCAGAATC...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR TCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAAGAGCCCAGGTCCCTTaGGCGCAGCACTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSRAQVP*AQHCGG
Trigger: GCCACCGCAGTGCTGCGCTCAAGGGACCTGGGCTCT...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR GCA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTTTGCTCTCGTCGCACTaGCCGCGGCGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFLLSSH*PRRSSS
Trigger: GGAGCTGGAGCGCCGCGGGCAGTGCGACGAGAGCAA...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCACGGGATGCCACGCCCTaGTCCAAGGCTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSRDATP*SKAGPC
Trigger: GCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCG...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR GCA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGGGTTTTGGCCCCATGTaGAACAGTAGGCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVGFGPM*NSRPWY
Trigger: ATACCAAGGCCTACTGTTGCACATGGGGCCAAAACC...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAGGTTTTGGCCCCATGTaGAACAGTAGGCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQGFGPM*NSRPWY
Trigger: ATACCAAGGCCTACTGTTGCACATGGGGCCAAAACC...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTCAGTGCCCACTGATGTaGCTGAAGCCCAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: GCGQIRGPEREALRPKKCQCPLM*LKPRLV
Trigger: AACCAACCTGGGCTTCAGCCACATCAGTGGGCACTG...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAGCGTCCGATGACTCCTaGGCGACGGCCGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSASDDS*ATAAAT
Trigger: AGTGGCTGCGGCCGTCGCCCAGGAGTCATCGGACGC...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAGGCTGTCAAGGGGCCTaGTGTCCCGGTCCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSGCQGA*CPGPVA
Trigger: TGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCC...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTTTTGGCCCCATGTaGAACAGTAGGCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPGFGPM*NSRPWY
Trigger: ATACCAAGGCCTACTGTTGCACATGGGGCCAAAACC...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGCACCCCCAAAGCCTTTaGATTCCCTTTCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVHPQSL*IPFPRR
Trigger: CCTTCTTGGAAAGGGAATGCAAAGGCTTTGGGGGTG...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAAACCCGGCCAAAGGTTaGCCGAGTTTCTCTACAGAA +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPNPAKG*PSFSTE
Trigger: TTCTGTAGAGAAACTCGGGCAACCTTTGGCCGGGTT...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595337.5
CDS-3UTR GCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCATTGAAGAGCTGGAGGTaGCATAGCTATAGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPLKSWR*HSYSVL
Trigger: CAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAA...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAAGCGCAGCACTGCGGTaGCCTGCCCAAACACGTCCA +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSSAALR*PAQTRP
Trigger: TGGACGTGTTTGGGCAGGCCACCGCAGTGCTGCGCT...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR CCA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGAAACTCAGCTGGAAATaGTTTAGGCCTCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVKLSWK*FRPQSP
Trigger: TGGGCTCTGAGGCCTAAACCATTTCCAGCTGAGTTT...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAAAGGTGGCTGTTTACTaGTTTTGGCCCCATGTGCAA +
Preference number: 4 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPKVAVY*FWPHVQ
Trigger: TTGCACATGGGGCCAAAACCAGTAAACAGCCACCTT...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR GCA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTTTGAAGAGCTGGAGGTaGCATAGCTATAGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: GCGQIRGPEREALRPKKCLKSWR*HSYSVL
Trigger: CAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAA...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAGGTGGCCCGGAGACTTaGAGGTGGGATCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSGGPET*RWDQSC
Trigger: GCAGGATTGATCCCACCTCCAAGTCTCCGGGCCACC...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAAGGTGGGATCAATCCTaGCAGTCCTGGATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSRWDQS*QSWIRR
Trigger: CCTCCTGATCCAGGACTGGCAGGATTGATCCCACCT...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR GCA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTAGGTGGGATCAATCCTaGCAGTCCTGGATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFRWDQS*QSWIRR
Trigger: CCTCCTGATCCAGGACTGGCAGGATTGATCCCACCT...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR GCA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTGAGAATTTGCAGAACTaGTTGACTGCCGACGGCGAC +
Preference number: 4 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFENLQN*LTADGD
Trigger: GTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATTCTC...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR GCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAGAGAATTTGCAGAACTaGTTGACTGCCGACGGCGAC +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSENLQN*LTADGD
Trigger: GTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATTCTC...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR CCA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAAAGGTGGCTGTTTACTaGTTTTGGCCCCATGTGCAA +
Preference number: 4 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSKVAVY*FWPHVQ
Trigger: TTGCACATGGGGCCAAAACCAGTAAACAGCCACCTT...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR GCA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCAGGTGACATCCAAGTaGAAGTCTATGTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFQVTSK*KSMFSS
Trigger: AGAGCTGAACATAGACTTGCACTTGGATGTCACCTG...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS GCA 90 bp GCCAGGTGCGGCAGCAGGTCGTGGCGGGCCAGCACGCGCAGGAGTTaGCCCAGCAGCCGCAGGTTGCTCTCGTCGCACTGCCCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: ARCGSRSWRASTRRS*PSSRRLLSSHCPRR
Trigger: GCGCCGCGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCTGGCCCGCCACGACCTGCTGCCGCACCTGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598200.1
ENST00000598727.5
CDS CCA 90 bp GACACTGGCCGGCGCCGCTTGCGCGCCAGGTGCGGCAGCAGGTCGTaGCGGGCCAGCACGCGCAGGAGTTGCCCCAGCAGCCGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: DTGRRRLRARCGSRS*RASTRRSCPSSRRL
Trigger: CAACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCTGGCCCGCCACGACCTGCTGCCGCACCTGGCGCGCAAGCGGCGCCGGCCAGTGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598200.1
ENST00000598727.5
CDS GCA 90 bp TCCCTTGAGCGCAGCACTGCGGTGGCCTGCCCAAACACGTCCAGCTaGCGCGCCAGCGCCTGGGGCCGCCGGGATGCCACGCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SLERSTAVACPNTSS*RASAWGRRDATPCS
Trigger: GGAGCAGGGCGTGGCATCCCGGCGGCCCCAGGCGCTGGCGCGGCAGCTGGACGTGTTTGGGCAGGCCACCGCAGTGCTGCGCTCAAGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS CCA 90 bp ACTGCGGTGGCCTGCCCAAACACGTCCAGCTGCCGCGCCAGCGCCTaGGGCCGCCGGGATGCCACGCCCTGCTCCAAGGCTGGCCCATGC +
Preference number: 5 (lower is better)
Translates to: TAVACPNTSSCRASA*GRRDATPCSKAGPC
Trigger: GCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCGGCGGCCCCAGGCGCTGGCGCGGCAGCTGGACGTGTTTGGGCAGGCCACCGCAGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS GCA 90 bp CGTGGCGGGCCAGCACGCGCAGGAGTTGCCCCAGCAGCCGCAGGTTaGTCTCGTCGCACTGCCCGCGGCGCTCCAGCTCCAGCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: RGGPARAGVAPAAAG*SRRTARGAPAPAGA
Trigger: AGCTCCTGCTGGAGCTGGAGCGCCGCGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCTGGCCCGCCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598200.1
ENST00000598727.5
CDS GCA 90 bp TCCAGCTGCCGCGCCAGCGCCTGGGGCCGCCGGGATGCCACGCCCTaGTCCAAGGCTGGCCCATGCTCGCAGTACTCTGCTCGAACCCGG +
Preference number: 5 (lower is better)
Translates to: SSCRASAWGRRDATP*SKAGPCSQYSARTR
Trigger: CCGGGTTCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCGGCGGCCCCAGGCGCTGGCGCGGCAGCTGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS GCA 90 bp ACGCGCAGGAGTTGCCCCAGCAGCCGCAGGTTGCTCTCGTCGCACTaGCCGCGGCGCTCCAGCTCCAGCAGGAGCTCTAGGCCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: TRRSCPSSRRLLSSH*PRRSSSSRSSRPLR
Trigger: CCGCAGCGGCCTAGAGCTCCTGCTGGAGCTGGAGCGCCGCGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGGGGCAACTCCTGCGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598200.1
ENST00000598727.5
CDS GCA 90 bp CAAACCACAGAGCCCAGGTCCCTTGAGCGCAGCACTGCGGTGGCCTaGCCAAACACGTCCAGCTGCCGCGCCAGCGCCTGGGGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: QTTEPRSLERSTAVA*PNTSSCRASAWGRR
Trigger: CCGGCGGCCCCAGGCGCTGGCGCGGCAGCTGGACGTGTTTGGGCAGGCCACCGCAGTGCTGCGCTCAAGGGACCTGGGCTCTGTGGTTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS CCA 90 bp CGCCAGCGCCTGGGGCCGCCGGGATGCCACGCCCTGCTCCAAGGCTaGCCCATGCTCGCAGTACTCTGCTCGAACCCGGAGCCGGATGTC +
Preference number: 5 (lower is better)
Translates to: RQRLGPPGCHALLQG*PMLAVLCSNPEPDV
Trigger: GACATCCGGCTCCGGGTTCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCGGCGGCCCCAGGCGCTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS GCA 90 bp GCCTGGGGCCGCCGGGATGCCACGCCCTGCTCCAAGGCTGGCCCATaGTCGCAGTACTCTGCTCGAACCCGGAGCCGGATGTCACAGGTC +
Preference number: 5 (lower is better)
Translates to: AWGRRDATPCSKAGP*SQYSARTRSRMSQV
Trigger: GACCTGTGACATCCGGCTCCGGGTTCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCGGCGGCCCCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000600559.5
CDS TCA 90 bp GCAACAGGCGGCGCCGGCCAGCCTCATAGTCAGCCTCATCCACACTaGCCAGCAGGCGAACAGCCTCCCGGCCCACAGCCTCTCGCAGGG +
Preference number: 5 (lower is better)
Translates to: ATGGAGQPHSQPHPH*PAGEQPPGPQPLAG
Trigger: CCCTGCGAGAGGCTGTGGGCCGGGAGGCTGTTCGCCTGCTGGTCAGTGTGGATGAGGCTGACTATGAGGCTGGCCGGCGCCGCCTGTTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000601135.5
CDS GCA 90 bp GCCTGGGGCCGCCGGGATGCCACGCCCTGCTCCAAGGCTGGCCCATaGTCGCAGTACTCTGCTCGAACCCGGAGCCGGATGTCATGTGAC +
Preference number: 5 (lower is better)
Translates to: AWGRRDATPCSKAGP*SQYSARTRSRMSCD
Trigger: GTCACATGACATCCGGCTCCGGGTTCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCGGCGGCCCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS CCA 90 bp TGTCACAAACCACAGAGCCCAGGTCCCTTGAGCGCAGCACTGCGGTaGCCTGCCCAAACACGTCCAGCTGCCGCGCCAGCGCCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: CHKPQSPGPLSAALR*PAQTRPAAAPAPGA
Trigger: GGCCCCAGGCGCTGGCGCGGCAGCTGGACGTGTTTGGGCAGGCCACCGCAGTGCTGCGCTCAAGGGACCTGGGCTCTGTGGTTTGTGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS-3UTR CAA 90 bp GGCAGGGCCAGGTGGCGGAGTCCAACAGACCTTGAGGTGAGTCCCAGCTCTGCCCAGCACGCGCAGGAGTaGCCCCAGCAGCCGCAGGTT +
Preference number: 5 (lower is better)
Translates to: GRARWRSPTDLEVSPSSAQHAQE*PQQPQV
Trigger: AACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCTG...GGCAGAGCTGGGACTCACCTCAAGGTCTGTTGGACTCCGCCACCTGGCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CAA 90 bp CACCCAGGAGTGGTTGGCCACAGAGGCAGGGCCAGGTGGCGGAGTCCAACAGACGCCACCCAGGAGTGGTaGGCCACAGAGGCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: HPGVVGHRGRARWRSPTDATQEW*ATEAGP
Trigger: TGGCCCTGCCTCTGTGGCCAACCACTCCTGGGTGGC...GTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTGGCCAACCACTCCTGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CAA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAACAGAGCCCAGGTCCCTaGAGCGCAGCACTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKQSPGP*SAALRW
Trigger: CCACCGCAGTGCTGCGCTCAAGGGACCTGGGCTCTG...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAACTCGCACTCGGTCAGTaGCCCGCCCACCACCTCGAA +
Preference number: 5 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKLALGQ*PAHHLE
Trigger: TTCGAGGTGGTGGGCGGGCAACTGACCGAGTGCGAG...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS CCA 90 bp GAGATGGTCGTCCTCCCAGGAGAAGGTGGCCCGGAGACTTGGAGGTaGGATCAATCCTGCCAGTCCTGGATCAGGAGGCCTCTGTCGGGC +
Preference number: 5 (lower is better)
Translates to: EMVVLPGEGGPETWR*DQSCQSWIRRPLSG
Trigger: GCCCGACAGAGGCCTCCTGATCCAGGACTGGCAGGATTGATCCCACCTCCAAGTCTCCGGGCCACCTTCTCCTGGGAGGACGACCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCCAGCACGCGCAGGAGTaGCCCCAGCAGCCGCAGGTT +
Preference number: 5 (lower is better)
Translates to: EGEESQVCKLKLGRALAGQHAQE*PQQPQV
Trigger: AACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCTG...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp CACCCAGGAGTGGTTGGCCACAGAGGCAGGGCCAGGTGGCGGAGTCCAACAGACAATTTGCAGAACTGCTaGACTGCCGACGGCGACGGC +
Preference number: 5 (lower is better)
Translates to: HPGVVGHRGRARWRSPTDNLQNC*TADGDG
Trigger: GCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATT...GTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTGGCCAACCACTCCTGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS GCA 90 bp GACGGCGACGGCAGCTACCCTCTGTCCTCTTTGAAGAGCTGGAGGTaGCATAGCTATAGCGTTCTGGAGACACTGGCCGGCGCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: DGDGSYPLSSLKSWR*HSYSVLETLAGAAC
Trigger: GCAAGCGGCGCCGGCCAGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598727.5
CDS CCA 90 bp ACTGCCGACGGCGACGGCAGCTACCCTCTGTCCTCTTTGAAGAGCTaGAGGTGCCATAGCTATAGCGTTCTGGAGACACTGGCCGGCGCC +
Preference number: 5 (lower is better)
Translates to: TADGDGSYPLSSLKS*RCHSYSVLETLAGA
Trigger: GGCGCCGGCCAGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598727.5
CDS-3UTR CAA 90 bp CCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCAGATCCTTGACTGCCTCGCACTCGGTCAGTaGCCCGCCCACCACCTCGAA +
Preference number: 5 (lower is better)
Translates to: PMAFRPSCLYPDDQILDCLALGQ*PAHHLE
Trigger: TTCGAGGTGGTGGGCGGGCAACTGACCGAGTGCGAG...GCAGTCAAGGATCTGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CAA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGCCCAGCAGCCGCAGGTaGCTCTCGTCGCACTGCCCG +
Preference number: 5 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVPSSRR*LSSHCP
Trigger: CGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGGG...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp GGAGTGGTTGGCCACAGAGGCAGGGCCAGGTGGCGGAGTCCAACAGACCTTGAGTACCCTCTGTCCTCTTaGAAGAGCTGGAGGTGCCAT +
Preference number: 5 (lower is better)
Translates to: GVVGHRGRARWRSPTDLEYPLSS*KSWRCH
Trigger: ATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTA...CTCAAGGTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTGGCCAACCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CAA 90 bp GCCCCCAGGCCCTCCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGACCACCATCACAGGTCACTTaGCCTTCAGAGGAAGGTCTG +
Preference number: 5 (lower is better)
Translates to: APRPSHGIQTQLSLPRRPPSQVT*PSEEGL
Trigger: CAGACCTTCCTCTGAAGGCAAAGTGACCTGTGATGG...TGGTCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGGAGGGCCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CAA 90 bp CACAGAGGCAGGGCCAGGTGGCGGAGTCCAACAGACCTTGAGGTGAGTCCCAGCCAGACGACCAGATCCTaGACTGCATCCTTGACTCCA +
Preference number: 5 (lower is better)
Translates to: HRGRARWRSPTDLEVSPSQTTRS*TASLTP
Trigger: TGGAGTCAAGGATGCAGTCAAGGATCTGGTCGTCTG...GCTGGGACTCACCTCAAGGTCTGTTGGACTCCGCCACCTGGCCCTGCCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS GCA 90 bp CACTCCAGCCTGTCTCCCACTGACCCTGCTGAGAATTTGCAGAACTaGTTGACTGCCGACGGCGACGGCAGCTACCCTCTGTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: HSSLSPTDPAENLQN*LTADGDGSYPLSSL
Trigger: CAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATTCTCAGCAGGGTCAGTGGGAGACAGGCTGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602075.5
CDS-3UTR CAA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCACCCAGCAGCCGCAGGTaGCTCTCGTCGCACTGCCCG +
Preference number: 5 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPPSSRR*LSSHCP
Trigger: CGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGGG...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAACAGCACGCGCAGGAGTaGCCCCAGCAGCCGCAGGTT +
Preference number: 5 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQQHAQE*PQQPQV
Trigger: AACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCTG...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp TGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGATGCTAGAGTGAATTTGCAGAACTGCTaGACTGCCGACGGCGACGGC +
Preference number: 5 (lower is better)
Translates to: CQGACCPGPVAVLKDARVNLQNC*TADGDG
Trigger: GCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATT...CACTCTAGCATCTTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp TGTGGGAGGGGCTGTCAAGGGGCCTGCTGTCCCGGTCCTGTCGCAGTCCTCAAAGGCTGTTTACTGGTTTaGGCCCCATGTGCAACAGTA +
Preference number: 5 (lower is better)
Translates to: CGRGCQGACCPGPVAVLKGCLLV*APCATV
Trigger: TACTGTTGCACATGGGGCCAAAACCAGTAAACAGCC...TTTGAGGACTGCGACAGGACCGGGACAGCAGGCCCCTTGACAGCCCCTCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS CCA 90 bp GATGACTCCTGGGCGACGGCCGCAGCCACTTGTTTTGGATCTTTCTaGCACCTTCTCTATTATTACGCCTGCGTCACCTCGCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: DDSWATAAATCFGSF*HLLYYYACVTSPLL
Trigger: GAGGAGGGGCGAGGTGACGCAGGCGTAATAATAGAGAAGGTGCCAGAAAGATCCAAAACAAGTGGCTGCGGCCGTCGCCCAGGAGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593804.5
ENST00000602201.1
CDS CCA 90 bp ACTGCCGACGGCGACGGCAGCTACCCTCTGTCCTCTTTGAAGAGCTaGAGGTGCCATAGCTATAGCGTTCTGGAGACACAGATTCTGGCG +
Preference number: 5 (lower is better)
Translates to: TADGDGSYPLSSLKS*RCHSYSVLETQILA
Trigger: CGCCAGAATCTGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000593804.5
ENST00000598090.5
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
ENST00000602201.1
CDS CCA 90 bp ACTGCCGACGGCGACGGCAGCTACCCTCTGTCCTCTTTGAAGAGCTaGAGGTGCCATAGCTATAGCGTTCTGGAGACACAAAGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: TADGDGSYPLSSLKS*RCHSYSVLETQRLP
Trigger: GGGCAACCTTTGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593561.5
CDS-3UTR CAA 90 bp GCAACTGGCCATGACCTCAATCAATGTGGGTGGGAGAGCAGGGGGCTGGGAGGAGACCCTGCTGAGAATTaGCAGAACTGCTTGACTGCC +
Preference number: 5 (lower is better)
Translates to: ATGHDLNQCGWESRGLGGDPAEN*QNCLTA
Trigger: GGCAGTCAAGCAGTTCTGCAAATTCTCAGCAGGGTC...TCCTCCCAGCCCCCTGCTCTCCCACCCACATTGATTGAGGTCATGGCCAGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS-3UTR CAA 90 bp TCAGCCCCCAGGCCCTCCCATGGCATTCAGACCCAGCTGTCTCTACCCAGACGATCCTTGACTGCATCCTaGACTCCAGTAAGCAACTGG +
Preference number: 5 (lower is better)
Translates to: SAPRPSHGIQTQLSLPRRSLTAS*TPVSNW
Trigger: CCAGTTGCTTACTGGAGTCAAGGATGCAGTCAAGGA...TCGTCTGGGTAGAGACAGCTGGGTCTGAATGCCATGGGAGGGCCTGGGGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598727.5
CDS GCA 90 bp GACGGCGACGGCAGCTACCCTCTGTCCTCTTTGAAGAGCTGGAGGTaGCATAGCTATAGCGTTCTGGAGACACAGATTCTGGCGTCCGAT +
Preference number: 5 (lower is better)
Translates to: DGDGSYPLSSLKSWR*HSYSVLETQILASD
Trigger: ATCGGACGCCAGAATCTGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000593804.5
ENST00000598090.5
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
ENST00000602201.1
CDS-3UTR CAA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTCAGCACGCGCAGGAGTaGCCCCAGCAGCCGCAGGTT +
Preference number: 5 (lower is better)
Translates to: GCGQIRGPEREALRPKKCQHAQE*PQQPQV
Trigger: AACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCTG...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp GAAGGTGAGGAGAGTCAGGTCTGTAAATTGAAGCTGGGCAGGGCCCTGGCTGGCTACCCTCTGTCCTCTTaGAAGAGCTGGAGGTGCCAT +
Preference number: 5 (lower is better)
Translates to: EGEESQVCKLKLGRALAGYPLSS*KSWRCH
Trigger: ATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTA...GCCAGCCAGGGCCCTGCCCAGCTTCAATTTACAGACCTGACTCTCCTCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS GCA 90 bp GACGGCGACGGCAGCTACCCTCTGTCCTCTTTGAAGAGCTGGAGGTaGCATAGCTATAGCGTTCTGGAGACACAAAGGTTGCCCGAGTTT +
Preference number: 5 (lower is better)
Translates to: DGDGSYPLSSLKSWR*HSYSVLETQRLPEF
Trigger: AAACTCGGGCAACCTTTGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593561.5
CDS CCA 90 bp AGCTATAGCGTTCTGGAGACACAGATTCTGGCGTCCGATGACTCCTaGGCGACGGCCGCAGCCACTTGTTTTGGATCTTTCTGGCACCTT +
Preference number: 5 (lower is better)
Translates to: SYSVLETQILASDDS*ATAAATCFGSFWHL
Trigger: AAGGTGCCAGAAAGATCCAAAACAAGTGGCTGCGGCCGTCGCCCAGGAGTCATCGGACGCCAGAATCTGTGTCTCCAGAACGCTATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000593804.5
ENST00000598090.5
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
ENST00000602201.1
CDS-3UTR CAA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGGTGGCCCGGAGACTaGGAGGTGGGATCAATCCTG +
Preference number: 5 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQRWPGD*EVGSIL
Trigger: CAGGATTGATCCCACCTCCAAGTCTCCGGGCCACCT...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS GCA 90 bp ATGGAAGCTTCCGGAGGTCCTCAACAGAAGCAGATGCTGGCACCCTaGTTCTTGTACAGCCACAGGTCACTTTGCCTTCAGAGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: MEASGGPQQKQMLAP*FLYSHRSLCLQRKV
Trigger: GACCTTCCTCTGAAGGCAAAGTGACCTGTGGCTGTACAAGAAGCAGGGTGCCAGCATCTGCTTCTGTTGAGGACCTCCGGAAGCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS-3UTR CAA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGAATTTGCAGAACTGCTaGACTGCCGACGGCGACGGC +
Preference number: 5 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVNLQNC*TADGDG
Trigger: GCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATT...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp TGCAACAGTAGGCCTTGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAAGGTGGCCCGGAGACTaGGAGGTGGGATCAATCCTG +
Preference number: 5 (lower is better)
Translates to: CNSRPWYDAAITLPCDTPRWPGD*EVGSIL
Trigger: CAGGATTGATCCCACCTCCAAGTCTCCGGGCCACCT...TGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCAAGGCCTACTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS GCA 90 bp TTCCACCATGAATGGAAGCTTCCGGAGGTCCTCAACAGAAGCAGATaGTGGCACCCTGCTTCTTGTACAGCCACAGGTCACTTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: FHHEWKLPEVLNRSR*WHPASCTATGHFAF
Trigger: GAAGGCAAAGTGACCTGTGGCTGTACAAGAAGCAGGGTGCCAGCATCTGCTTCTGTTGAGGACCTCCGGAAGCTTCCATTCATGGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS CCA 90 bp CACCATGAATGGAAGCTTCCGGAGGTCCTCAACAGAAGCAGATGCTaGCACCCTGCTTCTTGTACAGCCACAGGTCACTTTGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: HHEWKLPEVLNRSRC*HPASCTATGHFAFR
Trigger: TCTGAAGGCAAAGTGACCTGTGGCTGTACAAGAAGCAGGGTGCCAGCATCTGCTTCTGTTGAGGACCTCCGGAAGCTTCCATTCATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS-3UTR CAA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAGTTTCTCTACAGAACTaGCCGACGCTTAGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQVSLQN*PTLSPG
Trigger: TCCCGGGCTAAGCGTCGGCAAGTTCTGTAGAGAAAC...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595337.5
CDS-3UTR CAA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGGAACCCGGCCAAAGGTaGCCCGAGTTTCTCTACAGA +
Preference number: 5 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVEPGQR*PEFLYR
Trigger: TCTGTAGAGAAACTCGGGCAACCTTTGGCCGGGTTC...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595337.5
CDS-3UTR CAA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTAATTTGCAGAACTGCTaGACTGCCGACGGCGACGGC +
Preference number: 5 (lower is better)
Translates to: GCGQIRGPEREALRPKKCNLQNC*TADGDG
Trigger: GCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATT...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp CCCAGGTTGGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAGACCCTGCTGAGAATTaGCAGAACTGCTTGACTGCC +
Preference number: 5 (lower is better)
Translates to: PRLVVVKLEVLREKPLGQDPAEN*QNCLTA
Trigger: GGCAGTCAAGCAGTTCTGCAAATTCTCAGCAGGGTC...TTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACCAACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGTACCCTCTGTCCTCTTaGAAGAGCTGGAGGTGCCAT +
Preference number: 5 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVYPLSS*KSWRCH
Trigger: ATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTA...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCAGAGCCCAGGTCCCTaGAGCGCAGCACTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFQSPGP*SAALRW
Trigger: CCACCGCAGTGCTGCGCTCAAGGGACCTGGGCTCTG...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR CAA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGGACCCTGCTGAGAATTaGCAGAACTGCTTGACTGCC +
Preference number: 5 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVDPAEN*QNCLTA
Trigger: GGCAGTCAAGCAGTTCTGCAAATTCTCAGCAGGGTC...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCTCGCACTCGGTCAGTaGCCCGCCCACCACCTCGAA +
Preference number: 5 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFLALGQ*PAHHLE
Trigger: TTCGAGGTGGTGGGCGGGCAACTGACCGAGTGCGAG...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR CAA 90 bp CGAGTGTGTGCACCTGTGACAGTGCAGACAGCCCAAGATCAGAGATACAATGTGGAGAGCTCTGAGAACTaGATGTCACAAACCACAGAG +
Preference number: 5 (lower is better)
Translates to: RVCAPVTVQTAQDQRYNVESSEN*MSQTTE
Trigger: CTCTGTGGTTTGTGACATCAAGTTCTCAGAGCTCTC...CACATTGTATCTCTGATCTTGGGCTGTCTGCACTGTCACAGGTGCACACACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp TGGTATGATGCTGCCATAACACTCCCATGTGACACTCCAGGTGACATCCAAGTGGAGAGCTCTGAGAACTaGATGTCACAAACCACAGAG +
Preference number: 5 (lower is better)
Translates to: WYDAAITLPCDTPGDIQVESSEN*MSQTTE
Trigger: CTCTGTGGTTTGTGACATCAAGTTCTCAGAGCTCTC...CACTTGGATGTCACCTGGAGTGTCACATGGGAGTGTTATGGCAGCATCATACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp GGTTGTGGTCAAATTAGAGGTCCTGAGAGAGAAGCCCTTAGGCCAAAGAAGTGTGAGAGCTCTGAGAACTaGATGTCACAAACCACAGAG +
Preference number: 5 (lower is better)
Translates to: GCGQIRGPEREALRPKKCESSEN*MSQTTE
Trigger: CTCTGTGGTTTGTGACATCAAGTTCTCAGAGCTCTC...ACACTTCTTTGGCCTAAGGGCTTCTCTCTCAGGACCTCTAATTTGACCACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
CDS-3UTR CAA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTAGGTGGCCCGGAGACTaGGAGGTGGGATCAATCCTG +
Preference number: 5 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFRWPGD*EVGSIL
Trigger: CAGGATTGATCCCACCTCCAAGTCTCCGGGCCACCT...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS-3UTR CAA 90 bp CACCTATGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTAGCCCTGCTGAGAATTaGCAGAACTGCTTGACTGCC +
Preference number: 5 (lower is better)
Translates to: HLCPFQGSLIGIICKRSFSPAEN*QNCLTA
Trigger: GGCAGTCAAGCAGTTCTGCAAATTCTCAGCAGGGCT...AAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCATAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336034.8
CDS-3UTR CAA 90 bp TGCCCTTTCCAGGGCAGTTTAATTGGTATCATTTGTAAAAGGTCTTTTCCATCAGGCTGTTTACTGGTTTaGGCCCCATGTGCAACAGTA +
Preference number: 5 (lower is better)
Translates to: CPFQGSLIGIICKRSFPSGCLLV*APCATV
Trigger: TACTGTTGCACATGGGGCCAAAACCAGTAAACAGCC...TGATGGAAAAGACCTTTTACAAATGATACCAATTAAACTGCCCTGGAAAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336034.8
ENST00000596251.6
CDS CCA 72 bp CGGCGCCGCTTGCGCGCCAGGTGCGGCAGCAGGTCGTaGCGGGCCAGCACGCGCAGGAGTTGCCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RRRLRARCGSRS*RASTRRSCPSS
Trigger: GCTGCTGGGGCAACTCCTGCGCGTGCTGGCCCGCCACGACCTGCTGCCGCACCTGGCGCGCAAGCGGCGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598200.1
ENST00000598727.5
CDS GCA 72 bp CGCAGCACTGCGGTGGCCTGCCCAAACACGTCCAGCTaGCGCGCCAGCGCCTGGGGCCGCCGGGATGCCACG +
Preference number: 6 (lower is better)
Translates to: RSTAVACPNTSS*RASAWGRRDAT
Trigger: CGTGGCATCCCGGCGGCCCCAGGCGCTGGCGCGGCAGCTGGACGTGTTTGGGCAGGCCACCGCAGTGCTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS CCA 72 bp GCCTGCCCAAACACGTCCAGCTGCCGCGCCAGCGCCTaGGGCCGCCGGGATGCCACGCCCTGCTCCAAGGCT +
Preference number: 6 (lower is better)
Translates to: ACPNTSSCRASA*GRRDATPCSKA
Trigger: AGCCTTGGAGCAGGGCGTGGCATCCCGGCGGCCCCAGGCGCTGGCGCGGCAGCTGGACGTGTTTGGGCAGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS GCA 72 bp CGCGCCAGCGCCTGGGGCCGCCGGGATGCCACGCCCTaGTCCAAGGCTGGCCCATGCTCGCAGTACTCTGCT +
Preference number: 6 (lower is better)
Translates to: RASAWGRRDATP*SKAGPCSQYSA
Trigger: AGCAGAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCGGCGGCCCCAGGCGCTGGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS CAA 90 bp TCGTGGCGGGCCAGCACGCGCAGGAGTTGCCCCAGCAGCCGCAGGTaGCTCTCGTCGCACTGCCCGCGGCGCTCCAGCTCCAGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: SWRASTRRSCPSSRR*LSSHCPRRSSSSRS
Trigger: GCTCCTGCTGGAGCTGGAGCGCCGCGGGCAGTGCGACGAGAGCAACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCTGGCCCGCCACGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598200.1
ENST00000598727.5
CDS GCA 72 bp GGCAGCAGGTCGTGGCGGGCCAGCACGCGCAGGAGTTaGCCCAGCAGCCGCAGGTTGCTCTCGTCGCACTGC +
Preference number: 6 (lower is better)
Translates to: GSRSWRASTRRS*PSSRRLLSSHC
Trigger: GCAGTGCGACGAGAGCAACCTGCGGCTGCTGGGGCAACTCCTGCGCGTGCTGGCCCGCCACGACCTGCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598200.1
ENST00000598727.5
CDS GCA 72 bp GAGCCCAGGTCCCTTGAGCGCAGCACTGCGGTGGCCTaGCCAAACACGTCCAGCTGCCGCGCCAGCGCCTGG +
Preference number: 6 (lower is better)
Translates to: EPRSLERSTAVA*PNTSSCRASAW
Trigger: CCAGGCGCTGGCGCGGCAGCTGGACGTGTTTGGGCAGGCCACCGCAGTGCTGCGCTCAAGGGACCTGGGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS CCA 72 bp CTGGGGCCGCCGGGATGCCACGCCCTGCTCCAAGGCTaGCCCATGCTCGCAGTACTCTGCTCGAACCCGGAG +
Preference number: 6 (lower is better)
Translates to: LGPPGCHALLQG*PMLAVLCSNPE
Trigger: CTCCGGGTTCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCGGCGGCCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS CCA 72 bp CCACAGAGCCCAGGTCCCTTGAGCGCAGCACTGCGGTaGCCTGCCCAAACACGTCCAGCTGCCGCGCCAGCG +
Preference number: 6 (lower is better)
Translates to: PQSPGPLSAALR*PAQTRPAAAPA
Trigger: CGCTGGCGCGGCAGCTGGACGTGTTTGGGCAGGCCACCGCAGTGCTGCGCTCAAGGGACCTGGGCTCTGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS GCA 72 bp CGCCGGGATGCCACGCCCTGCTCCAAGGCTGGCCCATaGTCGCAGTACTCTGCTCGAACCCGGAGCCGGATG +
Preference number: 6 (lower is better)
Translates to: RRDATPCSKAGP*SQYSARTRSRM
Trigger: CATCCGGCTCCGGGTTCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGCGTGGCATCCCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
CDS TCA 72 bp GGCGCCGGCCAGCCTCATAGTCAGCCTCATCCACACTaGCCAGCAGGCGAACAGCCTCCCGGCCCACAGCCT +
Preference number: 6 (lower is better)
Translates to: GAGQPHSQPHPH*PAGEQPPGPQP
Trigger: AGGCTGTGGGCCGGGAGGCTGTTCGCCTGCTGGTCAGTGTGGATGAGGCTGACTATGAGGCTGGCCGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000601135.5
CDS GCA 72 bp GCCCTGCTCCAAGGCTGGCCCATGCTCGCAGTACTCTaGTCGAACCCGGAGCCGGATGTCTCTCTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: ALLQGWPMLAVL*SNPEPDVSLSL
Trigger: CAGGCTCAGAGAGACATCCGGCTCCGGGTTCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601135.5
CDS CCA 72 bp CCGGCCATTAGGCCTCTCTGGATCCTCACCAGATTCTaGCGTCCGATGACTCCTGGGCGACGGCCGCAGCCA +
Preference number: 6 (lower is better)
Translates to: PAIRPLWILTRF*RPMTPGRRPQP
Trigger: TGGCTGCGGCCGTCGCCCAGGAGTCATCGGACGCCAGAATCTGGTGAGGATCCAGAGAGGCCTAATGGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598200.1
CDS CAA 90 bp CTCATCCAGCAGAAAGGCCAGGAGCTCCAGCTCGCACTCGGTCAGTaGCCCGCCCACCACCTCGAACATACGGTGAAGCGACAGCATCCC +
Preference number: 6 (lower is better)
Translates to: LIQQKGQELQLALGQ*PAHHLEHTVKRQHP
Trigger: GGGATGCTGTCGCTTCACCGTATGTTCGAGGTGGTGGGCGGGCAACTGACCGAGTGCGAGCTGGAGCTCCTGGCCTTTCTGCTGGATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598200.1
ENST00000598727.5
CDS GCA 72 bp GCCCTGCTCCAAGGCTGGCCCATGCTCGCAGTACTCTaGTCGAACCCGGAGCCGGATGTCACAGGTCACTTT +
Preference number: 6 (lower is better)
Translates to: ALLQGWPMLAVL*SNPEPDVTGHF
Trigger: AAAGTGACCTGTGACATCCGGCTCCGGGTTCGAGCAGAGTACTGCGAGCATGGGCCAGCCTTGGAGCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000600559.5
CDS CAA 72 bp CAGAAAGGCCAGGAGCTCCAGCTCGCACTCGGTCAGTaGCCCGCCCACCACCTCGAACATACGGTGAAGCGA +
Preference number: 6 (lower is better)
Translates to: QKGQELQLALGQ*PAHHLEHTVKR
Trigger: TCGCTTCACCGTATGTTCGAGGTGGTGGGCGGGCAACTGACCGAGTGCGAGCTGGAGCTCCTGGCCTTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598200.1
ENST00000598727.5
CDS CAA 72 bp CCCGGAGCCGGATGTCATGTGACAAGCCTGCTCCCCTaGGCCTTCCACCATGAATGGAAGCTTCCGGAGGTC +
Preference number: 6 (lower is better)
Translates to: PGAGCHVTSLLP*AFHHEWKLPEV
Trigger: GACCTCCGGAAGCTTCCATTCATGGTGGAAGGCCAAGGGGAGCAGGCTTGTCACATGACATCCGGCTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS TCA 72 bp CTCCCACTGACCCTGCTGAGAATTTGCAGAACTGCTTaGCTGCCGACGGCGACGGCAGCTACCCTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: LPLTLLRICRTA*LPTATAATLCP
Trigger: AGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATTCTCAGCAGGGTCAGTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000593561.5
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598090.5
ENST00000598415.5
ENST00000598727.5
ENST00000601135.5
ENST00000602075.5
ENST00000602201.1
CDS GCA 72 bp CTGTCTCCCACTGACCCTGCTGAGAATTTGCAGAACTaGTTGACTGCCGACGGCGACGGCAGCTACCCTCTG +
Preference number: 6 (lower is better)
Translates to: LSPTDPAENLQN*LTADGDGSYPL
Trigger: CAGAGGGTAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATTCTCAGCAGGGTCAGTGGGAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000593561.5
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598090.5
ENST00000598415.5
ENST00000598727.5
ENST00000601135.5
ENST00000602075.5
ENST00000602201.1
CDS CAA 72 bp TCTCCCACTGACCCTGCTGAGAATTTGCAGAACTGCTaGACTGCCGACGGCGACGGCAGCTACCCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: SPTDPAENLQNC*TADGDGSYPLS
Trigger: GGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATTCTCAGCAGGGTCAGTGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000593561.5
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598090.5
ENST00000598415.5
ENST00000598727.5
ENST00000601135.5
ENST00000602075.5
ENST00000602201.1
CDS CAA 72 bp GCTGGCACCCTGCTTCTTGTACAGCCACAGGTCACTTaGCCTTCAGAGGAAGGTCTGGCGGGCTCTGACTGC +
Preference number: 6 (lower is better)
Translates to: AGTLLLVQPQVT*PSEEGLAGSDC
Trigger: GCAGTCAGAGCCCGCCAGACCTTCCTCTGAAGGCAAAGTGACCTGTGGCTGTACAAGAAGCAGGGTGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS CAA 90 bp GGGAGCCTGTCTCCCACTGACCCTGCTGAGAATTTGCAGAACTGCTaGACTGCCGACGGCGACGGCAGCTACCCTCTGTCCTCTTTGAAG +
Preference number: 6 (lower is better)
Translates to: GSLSPTDPAENLQNC*TADGDGSYPLSSLK
Trigger: CTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATTCTCAGCAGGGTCAGTGGGAGACAGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000593561.5
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598090.5
ENST00000598415.5
ENST00000598727.5
ENST00000601135.5
ENST00000602201.1
CDS CAA 90 bp GAAGCAGATGCTGGCACCCTGCTTCTTGTACAGCCACAGGTCACTTaGCCTTCAGAGGAAGGTCTGGCGGGCTCTGACTGCTGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: EADAGTLLLVQPQVT*PSEEGLAGSDCCWG
Trigger: ACCCCAGCAGCAGTCAGAGCCCGCCAGACCTTCCTCTGAAGGCAAAGTGACCTGTGGCTGTACAAGAAGCAGGGTGCCAGCATCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS CAA 90 bp CTGCTCGAACCCGGAGCCGGATGTCATGTGACAAGCCTGCTCCCCTaGGCCTTCCACCATGAATGGAAGCTTCCGGAGGTCCTCAACAGA +
Preference number: 6 (lower is better)
Translates to: LLEPGAGCHVTSLLP*AFHHEWKLPEVLNR
Trigger: TCTGTTGAGGACCTCCGGAAGCTTCCATTCATGGTGGAAGGCCAAGGGGAGCAGGCTTGTCACATGACATCCGGCTCCGGGTTCGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS CAA 90 bp TCCAGCCTGTCTCCCACTGACCCTGCTGAGAATTTGCAGAACTGCTaGACTGCCGACGGCGACGGCAGCTACCCTCTGTCCTCTTTGAAG +
Preference number: 6 (lower is better)
Translates to: SSLSPTDPAENLQNC*TADGDGSYPLSSLK
Trigger: CTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTTCTGCAAATTCTCAGCAGGGTCAGTGGGAGACAGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602075.5
CDS GCA 72 bp GGCAGCTACCCTCTGTCCTCTTTGAAGAGCTGGAGGTaGCATAGCTATAGCGTTCTGGAGACACTGGCCGGC +
Preference number: 6 (lower is better)
Translates to: GSYPLSSLKSWR*HSYSVLETLAG
Trigger: GCCGGCCAGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598727.5
CDS CCA 72 bp GCGGAACAAGCTCAGAACCCGGCCATTAGGCCTCTCTaGATCCTCACCAGATTCTGGCGTCCGATGACTCCT +
Preference number: 6 (lower is better)
Translates to: AEQAQNPAIRPL*ILTRFWRPMTP
Trigger: AGGAGTCATCGGACGCCAGAATCTGGTGAGGATCCAGAGAGGCCTAATGGCCGGGTTCTGAGCTTGTTCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598200.1
CDS CAA 72 bp ACTGCCGACGGCGACGGCAGCTACCCTCTGTCCTCTTaGAAGAGCTGGAGGTGCCATAGCTATAGCGTTCTG +
Preference number: 6 (lower is better)
Translates to: TADGDGSYPLSS*KSWRCHSYSVL
Trigger: CAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000336034.8
ENST00000593561.5
ENST00000593804.5
ENST00000595337.5
ENST00000596251.6
ENST00000598090.5
ENST00000598415.5
ENST00000598727.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
ENST00000602201.1
CDS CAA 90 bp AACTGCTTGACTGCCGACGGCGACGGCAGCTACCCTCTGTCCTCTTaGAAGAGCTGGAGGTGCCATAGCTATAGCGTTCTGGAGACACTG +
Preference number: 6 (lower is better)
Translates to: NCLTADGDGSYPLSS*KSWRCHSYSVLETL
Trigger: CAGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336034.8
ENST00000595337.5
ENST00000596251.6
ENST00000598727.5
CDS CAA 90 bp AACTGCTTGACTGCCGACGGCGACGGCAGCTACCCTCTGTCCTCTTaGAAGAGCTGGAGGTGCCATAGCTATAGCGTTCTGGAGACACAG +
Preference number: 6 (lower is better)
Translates to: NCLTADGDGSYPLSS*KSWRCHSYSVLETQ
Trigger: CTGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000593804.5
ENST00000598090.5
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
ENST00000602201.1
CDS CCA 72 bp GTTCTGGAGACACAGATTCTGGCGTCCGATGACTCCTaGGCGACGGCCGCAGCCACTTGTTTTGGATCTTTC +
Preference number: 6 (lower is better)
Translates to: VLETQILASDDS*ATAAATCFGSF
Trigger: GAAAGATCCAAAACAAGTGGCTGCGGCCGTCGCCCAGGAGTCATCGGACGCCAGAATCTGTGTCTCCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000593804.5
ENST00000598090.5
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
ENST00000602201.1
CDS CCA 72 bp GTGACAAGCCTGCTCCCCTTGGCCTTCCACCATGAATaGAAGCTTCCGGAGGTCCTCAACAGAAGCAGATGC +
Preference number: 6 (lower is better)
Translates to: VTSLLPLAFHHE*KLPEVLNRSRC
Trigger: GCATCTGCTTCTGTTGAGGACCTCCGGAAGCTTCCATTCATGGTGGAAGGCCAAGGGGAGCAGGCTTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS CAA 90 bp TTCTGGCGTCCGATGACTCCTGGGCGACGGCCGCAGCCACTTGTTTaGGATCTTTCTGGCACCTTCTCTATTATTACGCCTGCGTCACCT +
Preference number: 6 (lower is better)
Translates to: FWRPMTPGRRPQPLV*DLSGTFSIITPASP
Trigger: AGGTGACGCAGGCGTAATAATAGAGAAGGTGCCAGAAAGATCCAAAACAAGTGGCTGCGGCCGTCGCCCAGGAGTCATCGGACGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593804.5
ENST00000602201.1
CDS CAA 90 bp AACTGCTTGACTGCCGACGGCGACGGCAGCTACCCTCTGTCCTCTTaGAAGAGCTGGAGGTGCCATAGCTATAGCGTTCTGGAGACACAA +
Preference number: 6 (lower is better)
Translates to: NCLTADGDGSYPLSS*KSWRCHSYSVLETQ
Trigger: TTGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCCGTCGCCGTCGGCAGTCAAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593561.5
CDS GCA 72 bp GAGACACAAAGGTTGCCCGAGTTTCTCTACAGAACTTaGCGACGCTTAGCCCGGGAGCGACCCAGAGAAATG +
Preference number: 6 (lower is better)
Translates to: ETQRLPEFLYRT*RRLARERPREM
Trigger: CATTTCTCTGGGTCGCTCCCGGGCTAAGCGTCGGCAAGTTCTGTAGAGAAACTCGGGCAACCTTTGTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593561.5
CDS GCA 72 bp TCCGGAGGTCCTCAACAGAAGCAGATGCTGGCACCCTaGTTCTTGTACAGCCACAGGTCACTTTGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: SGGPQQKQMLAP*FLYSHRSLCLQ
Trigger: CTGAAGGCAAAGTGACCTGTGGCTGTACAAGAAGCAGGGTGCCAGCATCTGCTTCTGTTGAGGACCTCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS GCA 72 bp GAATGGAAGCTTCCGGAGGTCCTCAACAGAAGCAGATaGTGGCACCCTGCTTCTTGTACAGCCACAGGTCAC +
Preference number: 6 (lower is better)
Translates to: EWKLPEVLNRSR*WHPASCTATGH
Trigger: GTGACCTGTGGCTGTACAAGAAGCAGGGTGCCAGCATCTGCTTCTGTTGAGGACCTCCGGAAGCTTCCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS CCA 72 bp TGGGCGACGGCCGCAGCCACTTGTTTTGGATCTTTCTaGCACCTTCTCTATTATTACGCCTGCGTCACCTCG +
Preference number: 6 (lower is better)
Translates to: WATAAATCFGSF*HLLYYYACVTS
Trigger: CGAGGTGACGCAGGCGTAATAATAGAGAAGGTGCCAGAAAGATCCAAAACAAGTGGCTGCGGCCGTCGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593804.5
ENST00000602201.1
CDS CAA 72 bp GGAGACACAAAGGTTGCCCGAGTTTCTCTACAGAACTaGCCGACGCTTAGCCCGGGAGCGACCCAGAGAAAT +
Preference number: 6 (lower is better)
Translates to: GDTKVARVSLQN*PTLSPGATQRN
Trigger: ATTTCTCTGGGTCGCTCCCGGGCTAAGCGTCGGCAAGTTCTGTAGAGAAACTCGGGCAACCTTTGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593561.5
CDS CCA 72 bp TGGAAGCTTCCGGAGGTCCTCAACAGAAGCAGATGCTaGCACCCTGCTTCTTGTACAGCCACAGGTCACTTT +
Preference number: 6 (lower is better)
Translates to: WKLPEVLNRSRC*HPASCTATGHF
Trigger: AAAGTGACCTGTGGCTGTACAAGAAGCAGGGTGCCAGCATCTGCTTCTGTTGAGGACCTCCGGAAGCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598415.5
ENST00000602075.5
CDS CAA 72 bp CCGATGACTCCTGGGCGACGGCCGCAGCCACTTGTTTaGGATCTTTCTGGCACCTTCTCTATTATTACGCCT +
Preference number: 6 (lower is better)
Translates to: PMTPGRRPQPLV*DLSGTFSIITP
Trigger: AGGCGTAATAATAGAGAAGGTGCCAGAAAGATCCAAAACAAGTGGCTGCGGCCGTCGCCCAGGAGTCATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593804.5
ENST00000598415.5
ENST00000602201.1
CDS GCA 72 bp GGCAGCTACCCTCTGTCCTCTTTGAAGAGCTGGAGGTaGCATAGCTATAGCGTTCTGGAGACACAGATTCTG +
Preference number: 6 (lower is better)
Translates to: GSYPLSSLKSWR*HSYSVLETQIL
Trigger: CAGAATCTGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000593804.5
ENST00000598090.5
ENST00000598415.5
ENST00000600559.5
ENST00000601135.5
ENST00000602075.5
ENST00000602201.1
CDS GCA 72 bp GGCAGCTACCCTCTGTCCTCTTTGAAGAGCTGGAGGTaGCATAGCTATAGCGTTCTGGAGACACAAAGGTTG +
Preference number: 6 (lower is better)
Translates to: GSYPLSSLKSWR*HSYSVLETQRL
Trigger: CAACCTTTGTGTCTCCAGAACGCTATAGCTATGGCACCTCCAGCTCTTCAAAGAGGACAGAGGGTAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593561.5