RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DECR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104325

Ensembl transcript IDs: ENST00000220764.7, ENST00000517314.5, ENST00000517597.5, ENST00000517761.5, ENST00000518725.5, ENST00000519007.5, ENST00000519328.5, ENST00000519410.5, ENST00000520148.1, ENST00000520227.1, ENST00000520859.5, ENST00000521603.5, ENST00000521668.1, ENST00000522161.5, ENST00000522583.1, ENST00000524332.1

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGTTCCCCTGCACAAGCTCTCTTGGGTGCCACCACGTAAGACATaGCTTTGCTCCTCACTCACCTTCTGCCATGATTGTGAGGCCTCC +
Preference number: 1 (lower is better)
Translates to: GVPLHKLSWVPPRKT*LCSSLTFCHDCEAS
Trigger: GGAGGCCTCACAATCATGGCAGAAGGTGAGTGAGGAGCAAAGTCATGTCTTACGTGGTGGCACCCAAGAGAGCTTGTGCAGGGGAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR CCA 90 bp CCCATTCAGCTGCAAGAGACTTGCTCATGGCTTCCACACCTGCTTTaGCAGAAGCACTTGGTACTACAAAACCTGAACCAGTCTCAGCAT +
Preference number: 1 (lower is better)
Translates to: PIQLQETCSWLPHLL*QKHLVLQNLNQSQH
Trigger: ATGCTGAGACTGGTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCATGAGCAAGTCTCTTGCAGCTGAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000517597.5
3UTR CCA 90 bp GGGGTTTCCATGGGCTTGTGGCAGATTTATTCAGATGAGGTAAGATaGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGT +
Preference number: 1 (lower is better)
Translates to: GVSMGLWQIYSDEVR*KLVSSCVNLGNGDS
Trigger: ACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCCATCTTACCTCATCTGAATAAATCTGCCACAAGCCCATGGAAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR CCA 90 bp ACCACAGGGAATTCTGCCAATCATTTCTTTCTCAAATGTTCCAGTTaGGTCCAGACGGCTAAAGGCACCTTTGGTTTTTATAGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: TTGNSANHFFLKCSS*VQTAKGTFGFYRPW
Trigger: CCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCGTCTGGACCCAACTGGAACATTTGAGAAAGAAATGATTGGCAGAATTCCCTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR GCA 90 bp ATTAATCCAAGAAGCATAATCACTACAAAGGAAAGCAGCAAGATTTaGGAGTTCTTCTACAGTCCCCAGGCGACCACAGGGAATTCTGCC +
Preference number: 1 (lower is better)
Translates to: INPRSIITTKESSKI*EFFYSPQATTGNSA
Trigger: GGCAGAATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGATTATGCTTCTTGGATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR CCA 90 bp GTTATGTTCAGCAACAGGATTGACAAGGAAGTACTTACTTGCTCATaGCTTCCACACCTGCTTTGGCAGAAGCACTTGGTACTACAAAAC +
Preference number: 1 (lower is better)
Translates to: VMFSNRIDKEVLTCS*LPHLLWQKHLVLQN
Trigger: GTTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCATGAGCAAGTAAGTACTTCCTTGTCAATCCTGTTGCTGAACATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521603.5
3UTR TCA 90 bp AATGTTAATTGGGGTTTCCATGGGCTTGTGGCAGATTTATTCAGATaGGGTAAGATGGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAA +
Preference number: 1 (lower is better)
Translates to: NVNWGFHGLVADLFR*GKMEAGFLLCQLGQ
Trigger: TTGCCCAAGTTGACACAAGAGGAAACCAGCTTCCATCTTACCTCATCTGAATAAATCTGCCACAAGCCCATGGAAACCCCAATTAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR CCA 90 bp GCTGGGATGGCATGCTATCTCTTAGGCATCACATTCTCCAAACTCTaGAGACAGAATGAATTACTTCCTCCTCTACACTTAAATACTGCT +
Preference number: 1 (lower is better)
Translates to: AGMACYLLGITFSKL*RQNELLPPLHLNTA
Trigger: AGCAGTATTTAAGTGTAGAGGAGGAAGTAATTCATTCTGTCTCCAGAGTTTGGAGAATGTGATGCCTAAGAGATAGCATGCCATCCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR TCA 90 bp CAATATCAACACAATAGTGTGATAGTGAATAAGTCTCACGAGATCTaGTGGTTTTATAAATGGGAGTTCCCCTGCACAAGCTCTCTTGGG +
Preference number: 1 (lower is better)
Translates to: QYQHNSVIVNKSHEI*WFYKWEFPCTSSLG
Trigger: CCCAAGAGAGCTTGTGCAGGGGAACTCCCATTTATAAAACCATCAGATCTCGTGAGACTTATTCACTATCACACTATTGTGTTGATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR CCA 90 bp TTCTTTACCTCTTTTACCCAGAGAAATCTATTCTTCTTTTACAGCTaGGATGGCATGCTATCTCTTAGGCATCACATTCTCCAAACTCTG +
Preference number: 1 (lower is better)
Translates to: FFTSFTQRNLFFFYS*DGMLSLRHHILQTL
Trigger: CAGAGTTTGGAGAATGTGATGCCTAAGAGATAGCATGCCATCCCAGCTGTAAAAGAAGAATAGATTTCTCTGGGTAAAAGAGGTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR TCA 90 bp GTATATTATGTAACTCAAATGCTACCGCCACCATTGAGTTTCTCCTaGTTTTCCAAGTCACAAAGATCTGTTCTCTCTGCACTTCTAAGT +
Preference number: 1 (lower is better)
Translates to: VYYVTQMLPPPLSFS*FSKSQRSVLSALLS
Trigger: ACTTAGAAGTGCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGCGGTAGCATTTGAGTTACATAATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR TCA 90 bp ATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTaGCACAGTGTTTTGAACCATATCAGGATCCCTCACATCACACTG +
Preference number: 1 (lower is better)
Translates to: IVYHNIRMSCNFDQF*HSVLNHIRIPHITL
Trigger: CAGTGTGATGTGAGGGATCCTGATATGGTTCAAAACACTGTGTCAGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
3UTR TCA 90 bp ATGCTATCTCTTAGGCATCACATTCTCCAAACTCTGGAGACAGAATaGATTACTTCCTCCTCTACACTTAAATACTGCTGGAATAATACT +
Preference number: 1 (lower is better)
Translates to: MLSLRHHILQTLETE*ITSSSTLKYCWNNT
Trigger: AGTATTATTCCAGCAGTATTTAAGTGTAGAGGAGGAAGTAATTCATTCTGTCTCCAGAGTTTGGAGAATGTGATGCCTAAGAGATAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR GCA 90 bp CCAAGCATTAGGAGAAAGTCTTTCAGTAGGAGAAATAAAATTCCCTaGTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGAT +
Preference number: 1 (lower is better)
Translates to: PSIRRKSFSRRNKIP*CIVYHNIRMSCNFD
Trigger: ATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGGGAATTTTATTTCTCCTACTGAAAGACTTTCTCCTAATGCTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
3UTR-3UTR CCA 90 bp ATGGCTTCCACACCTGCTTTGGCAGAAGCACTTGGTACTACAAAACCTGAACCACATCCATCTTCCGGCTaGCTATCACGCACTGAGCAC +
Preference number: 2 (lower is better)
Translates to: MASTPALAEALGTTKPEPHPSSG*LSRTEH
Trigger: GTGCTCAGTGCGTGATAGCCAGCCGGAAGATGGATG...TGGTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517314.5
3UTR-3UTR GCA 90 bp GTTCCAGTTGGGTCCAGACGGCTAAAGGCACCTTTGGTTTTTATAGGCCCTGGTTTTACCCCATTCAGCTaGAAGAGACCTTTCTGTGCT +
Preference number: 2 (lower is better)
Translates to: VPVGSRRLKAPLVFIGPGFTPFS*KRPFCA
Trigger: AGCACAGAAAGGTCTCTTGCAGCTGAATGGGGTAAA...ACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCGTCTGGACCCAACTGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519328.5
3UTR-3UTR CCA 90 bp CACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCTTCCACACCTGCTTTaGCAGAAGCACTTGGTACTA +
Preference number: 2 (lower is better)
Translates to: HYKGKQQDLRVLLQSPGDLPHLL*QKHLVL
Trigger: TAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAG...GTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517597.5
3UTR-3UTR TCA 90 bp CACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACTCTGACACAGTGTTTTaGACCATATCAGGATCCCTC +
Preference number: 2 (lower is better)
Translates to: HYKGKQQDLRVLLQSPGDSDTVF*TISGSL
Trigger: GAGGGATCCTGATATGGTTCAAAACACTGTGTCAGA...GTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR-3UTR GCA 90 bp TCCATGGGCTTGTGGCAGATTTATTCAGATGAGGTAAGATGGAAGCTGGTTTCCACAGCTGGGATGGCATaGTATCTCTTAGGCATCACA +
Preference number: 2 (lower is better)
Translates to: SMGLWQIYSDEVRWKLVSTAGMA*YLLGIT
Trigger: TGTGATGCCTAAGAGATAGCATGCCATCCCAGCTGT...GGAAACCAGCTTCCATCTTACCTCATCTGAATAAATCTGCCACAAGCCCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR GCA 90 bp ATGGCTTCCACACCTGCTTTGGCAGAAGCACTTGGTACTACAAAACCTGAACCAGTGTCACGAAGGCTGTaGCATTTAGAACTATGTCAG +
Preference number: 2 (lower is better)
Translates to: MASTPALAEALGTTKPEPVSRRL*HLELCQ
Trigger: CTGACATAGTTCTAAATGGCACAGCCTTCGTGACAC...TGGTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
3UTR-3UTR GCA 90 bp TTCTTCTACAGTCCCCAGGCGACCACAGGGAATTCTGCCAATCATTTCTTTCTCGTGTCACGAAGGCTGTaGCATTTAGAACTATGTCAG +
Preference number: 2 (lower is better)
Translates to: FFYSPQATTGNSANHFFLVSRRL*HLELCQ
Trigger: CTGACATAGTTCTAAATGGCACAGCCTTCGTGACAC...GAGAAAGAAATGATTGGCAGAATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR-3UTR TCA 90 bp TTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCTGGCTATCACGCACTaGGCACCTAGGCTGGACAGA +
Preference number: 2 (lower is better)
Translates to: LVVFQFLVSRRLCHLELCLAITH*APRLDR
Trigger: TCTGTCCAGCCTAGGTGCTCAGTGCGTGATAGCCAG...ACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517314.5
3UTR-3UTR TCA 90 bp GAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACAGGGAATCTGGTTGAATCACATTaGATCGCATTCCATATTTAC +
Preference number: 2 (lower is better)
Translates to: ESSKICEFFYSPQATTGNLVESH*IAFHIY
Trigger: GTAAATATGGAATGCGATTCAATGTGATTCAACCAG...ATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR-3UTR TCA 90 bp ACGGCTAAAGGCACCTTTGGTTTTTATAGGCCCTGGTTGAATCACATTGAATCGGATGTCCTGCAACTTTaGTCAGTTCTGACACAGTGT +
Preference number: 2 (lower is better)
Translates to: TAKGTFGFYRPWLNHIESDVLQL*SVLTQC
Trigger: ACACTGTGTCAGAACTGATCAAAGTTGCAGGACATC...CGATTCAATGTGATTCAACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR CAA 90 bp TATTCAGATGAGGTAAGATGGAAGCTGGTTTCCTCTTGTGTCAACTaGGGCAATGGGGATAGTCAGTCTAGTGAACATGTTGTAACTGAC +
Preference number: 2 (lower is better)
Translates to: YSDEVRWKLVSSCVN*GNGDSQSSEHVVTD
Trigger: GTCAGTTACAACATGTTCACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCCATCTTACCTCATCTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR TCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATTGCTACCGCCACCATTaGGTTTCTCCTGATTTTCCA +
Preference number: 2 (lower is better)
Translates to: HRISTKGKMETRYLSAFYCYRHH*VSPDFP
Trigger: TGGAAAATCAGGAGAAACTCAATGGTGGCGGTAGCA...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR TCA 90 bp AAGCATAATCACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCTCTGACACAGTGTTTTaGACCATATCAGGATCCCTC +
Preference number: 2 (lower is better)
Translates to: KHNHYKGKQQDLRVLLQSSDTVF*TISGSL
Trigger: GAGGGATCCTGATATGGTTCAAAACACTGTGTCAGA...GGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGATTATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR-3UTR TCA 90 bp CCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTTCTGACACAGTGTTTTaGACCATATCAGGATCCCTC +
Preference number: 2 (lower is better)
Translates to: PISSVTKAVPFRTMSVMVSDTVF*TISGSL
Trigger: GAGGGATCCTGATATGGTTCAAAACACTGTGTCAGA...AACCATAACTGACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
3UTR-3UTR CCA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCTGGCTATCACTGGCCTaGCACATAATACATATTCAA +
Preference number: 2 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCWLSLA*HIIHIQ
Trigger: TTGAATATGTATTATGTGCCAGGCCAGTGATAGCCA...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR CCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATCCTCTTGTGTCAACTTaGGCAATGGGGATAGTCAGT +
Preference number: 2 (lower is better)
Translates to: HRISTKGKMETRYLSAFYPLVST*AMGIVS
Trigger: ACTGACTATCCCCATTGCCCAAGTTGACACAAGAGG...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR TCA 90 bp GTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATTTCTGACACAGTGTTTTaGACCATATCAGGATCCCTC +
Preference number: 2 (lower is better)
Translates to: VLNHIRIPHITLNCMNLISDTVF*TISGSL
Trigger: GAGGGATCCTGATATGGTTCAAAACACTGTGTCAGA...AATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
3UTR-3UTR TCA 90 bp GTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCAGTTAGATGTCCTGCAACTTTaGTCAGTTCTGACACAGTGT +
Preference number: 2 (lower is better)
Translates to: VFQFLVSRRLCHLELCQLDVLQL*SVLTQC
Trigger: ACACTGTGTCAGAACTGATCAAAGTTGCAGGACATC...TAACTGACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
3UTR-3UTR TCA 90 bp CCCTTTTCTGTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTTTTATAGGCCCTGGTTaGATCACATTGAATCGCATT +
Preference number: 2 (lower is better)
Translates to: PFSVTKMKAKVVLGTFCLFIGPG*ITLNRI
Trigger: AATGCGATTCAATGTGATTCAACCAGGGCCTATAAA...AAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTACAGAAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517597.5
3UTR-3UTR TCA 90 bp AAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATGAGTTCTTCTTTATAGGCCCTGGTTaGATCACATTGAATCGCATT +
Preference number: 2 (lower is better)
Translates to: KMKAKVVLGTFCLPDEFFFIGPG*ITLNRI
Trigger: AATGCGATTCAATGTGATTCAACCAGGGCCTATAAA...GAAGAACTCATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR-3UTR TCA 90 bp AAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATGAGTTCTTCAACTTTGATCAGTTCTaGCACAGTGTTTTGAACCAT +
Preference number: 2 (lower is better)
Translates to: KMKAKVVLGTFCLPDEFFNFDQF*HSVLNH
Trigger: ATGGTTCAAAACACTGTGTCAGAACTGATCAAAGTT...GAAGAACTCATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR-3UTR TCA 90 bp AAAGCAGGAATACAGTTCCCTGAGCCACCAACTGTATTAGTTATGTTCAGCAACAACTTTGATCAGTTCTaGCACAGTGTTTTGAACCAT +
Preference number: 2 (lower is better)
Translates to: KAGIQFPEPPTVLVMFSNNFDQF*HSVLNH
Trigger: ATGGTTCAAAACACTGTGTCAGAACTGATCAAAGTT...GTTGCTGAACATAACTAATACAGTTGGTGGCTCAGGGAACTGTATTCCTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521603.5
3UTR-3UTR TCA 90 bp GTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGCATTAGGAGAAAGTCTTGATGTCCTGCAACTTTaGTCAGTTCTGACACAGTGT +
Preference number: 2 (lower is better)
Translates to: VPFRTMSVMVFQALGESLDVLQL*SVLTQC
Trigger: ACACTGTGTCAGAACTGATCAAAGTTGCAGGACATC...AAGACTTTCTCCTAATGCTTGGAAAACCATAACTGACATAGTTCTAAATGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
3UTR-3UTR GCA 90 bp ACGGCTAAAGGCACCTTTGGTTTTTATAGGCCCTGGTTGAATCACATTGAATCGAGTAATAGAAAGAAATaGTGCTCCTTTCTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: TAKGTFGFYRPWLNHIESSNRKK*CSFLCF
Trigger: AAAGCACAGAAAGGAGCAGCATTTCTTTCTATTACT...CGATTCAATGTGATTCAACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517597.5
3UTR-3UTR CCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATGTTTCCATGGGCTTGTaGCAGATTTATTCAGATGAG +
Preference number: 2 (lower is better)
Translates to: HRISTKGKMETRYLSAFYVSMGL*QIYSDE
Trigger: CTCATCTGAATAAATCTGCCACAAGCCCATGGAAAC...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR CCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATACTGTCAATGTTAATTaGGGTTTCCATGGGCTTGTG +
Preference number: 2 (lower is better)
Translates to: HRISTKGKMETRYLSAFYTVNVN*GFHGLV
Trigger: CACAAGCCCATGGAAACCCCAATTAACATTGACAGT...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR CCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATTTCTTCTTTTACAGCTaGGATGGCATGCTATCTCTT +
Preference number: 2 (lower is better)
Translates to: HRISTKGKMETRYLSAFYFFFYS*DGMLSL
Trigger: AAGAGATAGCATGCCATCCCAGCTGTAAAAGAAGAA...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR TCA 90 bp GTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATTAACTTTGATCAGTTCTaGCACAGTGTTTTGAACCAT +
Preference number: 2 (lower is better)
Translates to: VLNHIRIPHITLNCMNLINFDQF*HSVLNH
Trigger: ATGGTTCAAAACACTGTGTCAGAACTGATCAAAGTT...AATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
3UTR-3UTR TCA 90 bp TGTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATAACTTTGATCAGTTCTaGCACAGTGTTTTGAACCAT +
Preference number: 2 (lower is better)
Translates to: CFEPYQDPSHHTELHEPYNFDQF*HSVLNH
Trigger: ATGGTTCAAAACACTGTGTCAGAACTGATCAAAGTT...ATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
3UTR-3UTR CCA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTGTTGTAACTGACTCCTaGGAAAGCAAAATGGACATT +
Preference number: 2 (lower is better)
Translates to: AMLNYESMKPLSFINYPVVVTDS*ESKMDI
Trigger: AATGTCCATTTTGCTTTCCCAGGAGTCAGTTACAAC...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR CCA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTGAAAGTCAGTATAATTaGAAATGTTGGGCCACTTAT +
Preference number: 2 (lower is better)
Translates to: AMLNYESMKPLSFINYPVESQYN*KCWATY
Trigger: ATAAGTGGCCCAACATTTCCAATTATACTGACTTTC...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR CAA 90 bp GAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACAGGGAATCGGCTAAAGGCACCTTaGGTTTTTATAGGCCCTGGT +
Preference number: 3 (lower is better)
Translates to: ESSKICEFFYSPQATTGNRLKAP*VFIGPG
Trigger: ACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCG...ATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR TCA 72 bp CTGCACAAGCTCTCTTGGGTGCCACCACGTAAGACATaGCTTTGCTCCTCACTCACCTTCTGCCATGATTGT +
Preference number: 3 (lower is better)
Translates to: LHKLSWVPPRKT*LCSSLTFCHDC
Trigger: ACAATCATGGCAGAAGGTGAGTGAGGAGCAAAGTCATGTCTTACGTGGTGGCACCCAAGAGAGCTTGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR CCA 72 bp CTGCAAGAGACTTGCTCATGGCTTCCACACCTGCTTTaGCAGAAGCACTTGGTACTACAAAACCTGAACCAG +
Preference number: 3 (lower is better)
Translates to: LQETCSWLPHLL*QKHLVLQNLNQ
Trigger: CTGGTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCATGAGCAAGTCTCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000517597.5
3UTR GCA 72 bp AGAAGCATAATCACTACAAAGGAAAGCAGCAAGATTTaGGAGTTCTTCTACAGTCCCCAGGCGACCACAGGG +
Preference number: 3 (lower is better)
Translates to: RSIITTKESSKI*EFFYSPQATTG
Trigger: CCCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGATTATGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR-3UTR CAA 90 bp AGGCCCTGGTTGAATCACATTGAATCGCATTCCATATTTACCCCATTCAGCTGCGGATGTCCTGCAACTTaGATCAGTTCTGACACAGTG +
Preference number: 3 (lower is better)
Translates to: RPWLNHIESHSIFTPFSCGCPAT*ISSDTV
Trigger: CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCC...GCAGCTGAATGGGGTAAATATGGAATGCGATTCAATGTGATTCAACCAGGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR-3UTR CAA 90 bp AGCATAATCACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCGCTTCCACACCTGCTTaGGCAGAAGCACTTGGTACT +
Preference number: 3 (lower is better)
Translates to: SIITTKESSKICEFFYSPASTPA*AEALGT
Trigger: AGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGC...GGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGATTATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517597.5
3UTR CCA 72 bp GAAGTACTTACTTGCTCATGGCTTCCACACCTGCTTTaGCAGAAGCACTTGGTACTACAAAACCTGAACCAG +
Preference number: 3 (lower is better)
Translates to: EVLTCSWLPHLL*QKHLVLQNLNQ
Trigger: CTGGTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCATGAGCAAGTAAGTACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521603.5
3UTR-3UTR CAA 90 bp ATTCCATATTTACCCCATTCAGCTGCAAGAGACTTGCTCATGGCTTCCACACCTCTTTGGCAGAAGCACTaGGTACTACAAAACCTGAAC +
Preference number: 3 (lower is better)
Translates to: IPYLPHSAARDLLMASTPLWQKH*VLQNLN
Trigger: GTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAG...AGGTGTGGAAGCCATGAGCAAGTCTCTTGCAGCTGAATGGGGTAAATATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517597.5
3UTR-3UTR CAA 90 bp AAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATGAGTTCTTCGGATGTCCTGCAACTTaGATCAGTTCTGACACAGTG +
Preference number: 3 (lower is better)
Translates to: KMKAKVVLGTFCLPDEFFGCPAT*ISSDTV
Trigger: CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCC...GAAGAACTCATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR CCA 72 bp ATGGGCTTGTGGCAGATTTATTCAGATGAGGTAAGATaGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAAT +
Preference number: 3 (lower is better)
Translates to: MGLWQIYSDEVR*KLVSSCVNLGN
Trigger: ATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCCATCTTACCTCATCTGAATAAATCTGCCACAAGCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR CAA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATTCCTCTTGTGTCAACTaGGGCAATGGGGATAGTCAG +
Preference number: 3 (lower is better)
Translates to: HRISTKGKMETRYLSAFYSSCVN*GNGDSQ
Trigger: CTGACTATCCCCATTGCCCAAGTTGACACAAGAGGA...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR CAA 90 bp ATACAGTTCCCTGAGCCACCAACTGTATTAGTTATGTTCAGCAACAGGATTGACCTTTGGCAGAAGCACTaGGTACTACAAAACCTGAAC +
Preference number: 3 (lower is better)
Translates to: IQFPEPPTVLVMFSNRIDLWQKH*VLQNLN
Trigger: GTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAG...GTCAATCCTGTTGCTGAACATAACTAATACAGTTGGTGGCTCAGGGAACTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521603.5
3UTR TCA 72 bp GCCACCAACTGTATTAGTTATGTTCAGCAACAGGATTaGCAAGGAAGTACTTACTTGCTCATGGCTTCCACA +
Preference number: 3 (lower is better)
Translates to: ATNCISYVQQQD*QGSTYLLMAST
Trigger: TGTGGAAGCCATGAGCAAGTAAGTACTTCCTTGTCAATCCTGTTGCTGAACATAACTAATACAGTTGGTGGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521603.5
3UTR TCA 72 bp CGGCTAAAGGCACCTTTGGTTTTTATAGGCCCTGGTTaGATCACATTGAATCGCATTCCATATTTACCCCAT +
Preference number: 3 (lower is better)
Translates to: RLKAPLVFIGPG*ITLNRIPYLPH
Trigger: ATGGGGTAAATATGGAATGCGATTCAATGTGATTCAACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR CCA 72 bp CAGACGGCTAAAGGCACCTTTGGTTTTTATAGGCCCTaGTTGAATCACATTGAATCGCATTCCATATTTACC +
Preference number: 3 (lower is better)
Translates to: QTAKGTFGFYRP*LNHIESHSIFT
Trigger: GGTAAATATGGAATGCGATTCAATGTGATTCAACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR-3UTR CAA 90 bp TGTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATGGATGTCCTGCAACTTaGATCAGTTCTGACACAGTG +
Preference number: 3 (lower is better)
Translates to: CFEPYQDPSHHTELHEPYGCPAT*ISSDTV
Trigger: CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCC...ATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
3UTR TCA 72 bp CACAATAGTGTGATAGTGAATAAGTCTCACGAGATCTaGTGGTTTTATAAATGGGAGTTCCCCTGCACAAGC +
Preference number: 3 (lower is better)
Translates to: HNSVIVNKSHEI*WFYKWEFPCTS
Trigger: GCTTGTGCAGGGGAACTCCCATTTATAAAACCATCAGATCTCGTGAGACTTATTCACTATCACACTATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR TCA 72 bp ACCTGCTTTGGCAGAAGCACTTGGTACTACAAAACCTaGACCAGTCTCAGCATAGATAGTAGTAATAGAAAG +
Preference number: 3 (lower is better)
Translates to: TCFGRSTWYYKT*TSLSIDSSNRK
Trigger: CTTTCTATTACTACTATCTATGCTGAGACTGGTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
3UTR GCA 72 bp AGAGAAATCTATTCTTCTTTTACAGCTGGGATGGCATaGTATCTCTTAGGCATCACATTCTCCAAACTCTGG +
Preference number: 3 (lower is better)
Translates to: REIYSSFTAGMA*YLLGITFSKLW
Trigger: CCAGAGTTTGGAGAATGTGATGCCTAAGAGATAGCATGCCATCCCAGCTGTAAAAGAAGAATAGATTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR-3UTR CAA 90 bp GCTTTAATTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAGGATGTCCTGCAACTTaGATCAGTTCTGACACAGTG +
Preference number: 3 (lower is better)
Translates to: ALISCFPISSVTKAVPFRGCPAT*ISSDTV
Trigger: CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCC...TCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAATTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
3UTR CCA 72 bp TCTTTTACCCAGAGAAATCTATTCTTCTTTTACAGCTaGGATGGCATGCTATCTCTTAGGCATCACATTCTC +
Preference number: 3 (lower is better)
Translates to: SFTQRNLFFFYS*DGMLSLRHHIL
Trigger: GAGAATGTGATGCCTAAGAGATAGCATGCCATCCCAGCTGTAAAAGAAGAATAGATTTCTCTGGGTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR CCA 72 bp AATTCTGCCAATCATTTCTTTCTCAAATGTTCCAGTTaGGTCCAGACGGCTAAAGGCACCTTTGGTTTTTAT +
Preference number: 3 (lower is better)
Translates to: NSANHFFLKCSS*VQTAKGTFGFY
Trigger: ATAAAAACCAAAGGTGCCTTTAGCCGTCTGGACCCAACTGGAACATTTGAGAAAGAAATGATTGGCAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR-3UTR CAA 90 bp GTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATTAGTTTGAGAAGAAATTaGTTCTGCGGTAGCTTTCAA +
Preference number: 3 (lower is better)
Translates to: VLNHIRIPHITLNCMNLISLRRN*FCGSFQ
Trigger: TTGAAAGCTACCGCAGAACAAATTTCTTCTCAAACT...AATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
3UTR GCA 72 bp TTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTaGCATTTAGAACTATGTCAGTTATGGTTTTCCAAG +
Preference number: 3 (lower is better)
Translates to: LVVFQFLVSRRL*HLELCQLWFSK
Trigger: CTTGGAAAACCATAACTGACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR TCA 90 bp ACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCCCGGTAGCTTCATGTTaGGTCTCCAGAACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: TTKESSKICEFFYSPQATPVASC*VSRTRA
Trigger: GGCCCGAGTTCTGGAGACTCAACATGAAGCTACCGG...GGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519328.5
CDS-3UTR CCA 90 bp GCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACAGGGAATTCTGCCACTCAAATGTTCCAGTTaGGTCCAGACGGCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: ARFASSSTVPRRPQGILPLKCSS*VQTAKG
Trigger: GCCTTTAGCCGTCTGGACCCAACTGGAACATTTGAG...TGGCAGAATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR GCA 90 bp GGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGTCAGTCTAGTGCATGGCTTCCACACCTaGTTTGGCAGAAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GSWFPLVSTWAMGIVSLVHGFHT*FGRSTW
Trigger: CCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCATG...CACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp ATGGCTTCCACACCTGCTTTGGCAGAAGCACTTGGTACTACAAAACCTGAACCACAGCTGCAAGAGACTTaGTCATGGCTTCCACACCTG +
Preference number: 4 (lower is better)
Translates to: MASTPALAEALGTTKPEPQLQET*SWLPHL
Trigger: CAGGTGTGGAAGCCATGAGCAAGTCTCTTGCAGCTG...TGGTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000517597.5
CDS-3UTR CCA 90 bp GGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGTCAGTCTAGTGCTCAAATGTTCCAGTTaGGTCCAGACGGCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: GSWFPLVSTWAMGIVSLVLKCSS*VQTAKG
Trigger: GCCTTTAGCCGTCTGGACCCAACTGGAACATTTGAG...CACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp GGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGTCAGTCTAGTGTTTACCCCATTCAGCTaGAAGAGACTTGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: GSWFPLVSTWAMGIVSLVFTPFS*KRLAHG
Trigger: GCCATGAGCAAGTCTCTTGCAGCTGAATGGGGTAAA...CACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp ATCACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGTCTATGGTGTCCCACTaGTCCTTGGTGACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ITTKESSKICEFFYSPQASMVSH*SLVTFL
Trigger: GAGAAAGGTCACCAAGGAGCAGTGGGACACCATAGA...CGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CCA 90 bp ACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACACTTCCACACCTGCTTTaGCAGAAGCACTTGGTACTA +
Preference number: 4 (lower is better)
Translates to: TKESSKICEFFYSPQATTLPHLL*QKHLVL
Trigger: TAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAG...TGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517597.5
CDS-3UTR TCA 90 bp GGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGTCAGTCTAGTGTTTTTGTCCCATAACTaGAAAACCTCCGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: GSWFPLVSTWAMGIVSLVFLSHN*KTSEER
Trigger: TCGCTCCTCGGAGGTTTTTCAGTTATGGGACAAAAA...CACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp ACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCTCTGACACAGTGTTTTaGACCATATCAGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: TTKESSKICEFFYSPQATSDTVF*TISGSL
Trigger: GAGGGATCCTGATATGGTTCAAAACACTGTGTCAGA...GGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR TCA 90 bp GGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGTCAGTCTAGTGGATGTCCTGCAACTTTaGTCAGTTCTGACACAGTGT +
Preference number: 4 (lower is better)
Translates to: GSWFPLVSTWAMGIVSLVDVLQL*SVLTQC
Trigger: ACACTGTGTCAGAACTGATCAAAGTTGCAGGACATC...CACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp CAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACAGGGAATTCTGCTTTATAGGCCCTGGTTaGATCACATTGAATCGCATT +
Preference number: 4 (lower is better)
Translates to: QQDLRVLLQSPGDHREFCFIGPG*ITLNRI
Trigger: AATGCGATTCAATGTGATTCAACCAGGGCCTATAAA...GCAGAATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR TCA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCCCACCACGTAAGACATaGCTTTGCTCCTCACTCACC +
Preference number: 4 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCPPRKT*LCSSLT
Trigger: GGTGAGTGAGGAGCAAAGTCATGTCTTACGTGGTGG...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp CCCTGCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCCCGGTAGCTTCATGTTaGGTCTCCAGAACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: PCCIVYHNIRMSCNFDQFPVASC*VSRTRA
Trigger: GGCCCGAGTTCTGGAGACTCAACATGAAGCTACCGG...GAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR GCA 90 bp AGGCCCTGGTTGAATCACATTGAATCGCATTCCATATTTACCCCATTCAGCTGCTCTATGGTGTCCCACTaGTCCTTGGTGACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RPWLNHIESHSIFTPFSCSMVSH*SLVTFL
Trigger: GAGAAAGGTCACCAAGGAGCAGTGGGACACCATAGA...GCAGCTGAATGGGGTAAATATGGAATGCGATTCAATGTGATTCAACCAGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CCA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCCTGCACAAGCTCTCTTaGGTGCCACCACGTAAGACA +
Preference number: 4 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCLHKLS*VPPRKT
Trigger: TGTCTTACGTGGTGGCACCCAAGAGAGCTTGTGCAG...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATCTGGCTATCACGCACTaGGCACCTAGGCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: HRISTKGKMETRYLSAFYLAITH*APRLDR
Trigger: TCTGTCCAGCCTAGGTGCTCAGTGCGTGATAGCCAG...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp ATGGCTTCCACACCTGCTTTGGCAGAAGCACTTGGTACTACAAAACCTGAACCATCTGACACAGTGTTTTaGACCATATCAGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: MASTPALAEALGTTKPEPSDTVF*TISGSL
Trigger: GAGGGATCCTGATATGGTTCAAAACACTGTGTCAGA...TGGTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR TCA 90 bp ATGGCTTCCACACCTGCTTTGGCAGAAGCACTTGGTACTACAAAACCTGAACCAGATGTCCTGCAACTTTaGTCAGTTCTGACACAGTGT +
Preference number: 4 (lower is better)
Translates to: MASTPALAEALGTTKPEPDVLQL*SVLTQC
Trigger: ACACTGTGTCAGAACTGATCAAAGTTGCAGGACATC...TGGTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR TCA 90 bp GGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGTCAGTCTAGTGTGGTACTACAAAACCTaGACCAGTCTCAGCATAGAT +
Preference number: 4 (lower is better)
Translates to: GSWFPLVSTWAMGIVSLVWYYKT*TSLSID
Trigger: ATCTATGCTGAGACTGGTTCAGGTTTTGTAGTACCA...CACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp GTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATTCCGGTAGCTTCATGTTaGGTCTCCAGAACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: VLNHIRIPHITLNCMNLIPVASC*VSRTRA
Trigger: GGCCCGAGTTCTGGAGACTCAACATGAAGCTACCGG...AATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517314.5
CDS-3UTR GCA 90 bp AAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATGAGTTCTTCCATGGCTTCCACACCTaGTTTGGCAGAAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: KMKAKVVLGTFCLPDEFFHGFHT*FGRSTW
Trigger: CCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCATG...GAAGAACTCATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517597.5
CDS-3UTR GCA 90 bp GTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATGAGTCTATGGTGTCCCACTaGTCCTTGGTGACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VTKMKAKVVLGTFCLPDESMVSH*SLVTFL
Trigger: GAGAAAGGTCACCAAGGAGCAGTGGGACACCATAGA...CTCATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000520148.1
CDS-3UTR GCA 90 bp TCTGTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATCACAACAGACCTCCCTaGCCCAAACACACTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SVTKMKAKVVLGTFCLPDHNRPP*PKHTLW
Trigger: CCAAAGAGTGTGTTTGGGGCAGGGAGGTCTGTTGTG...ATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520148.1
CDS-3UTR CCA 90 bp CAGACGGCTAAAGGCACCTTTGGTTTTTATAGGCCCTGGTTGAATCACATTGAACTCAAATGTTCCAGTTaGGTCCAGACGGCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: QTAKGTFGFYRPWLNHIELKCSS*VQTAKG
Trigger: GCCTTTAGCCGTCTGGACCCAACTGGAACATTTGAG...TTCAATGTGATTCAACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CCA 90 bp GGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGTCAGTCTAGTGACTGTCAATGTTAATTaGGGTTTCCATGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GSWFPLVSTWAMGIVSLVTVNVN*GFHGLV
Trigger: CACAAGCCCATGGAAACCCCAATTAACATTGACAGT...CACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
3UTR CAA 72 bp AAGAAGCATAATCACTACAAAGGAAAGCAGCAAGATTaGCGAGTTCTTCTACAGTCCCCAGGCGACCACAGG +
Preference number: 4 (lower is better)
Translates to: KKHNHYKGKQQD*RVLLQSPGDHR
Trigger: CCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGATTATGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR GCA 90 bp AATCACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGAAAGCAGCAAGATTTaGGAGTTCTTCTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: NHYKGKQQDLRVLLQSPGESSKI*EFFYSP
Trigger: GGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTC...GCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CCA 90 bp GTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATTCATCCATCTTCCGGCTaGCTATCACGCACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: VLNHIRIPHITLNCMNLIHPSSG*LSRTEH
Trigger: GTGCTCAGTGCGTGATAGCCAGCCGGAAGATGGATG...AATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517314.5
CDS-3UTR CCA 90 bp TCTGTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATCAGCATTGTCAGGATTaGTTCCACAACAGACCTCCC +
Preference number: 4 (lower is better)
Translates to: SVTKMKAKVVLGTFCLPDQHCQD*FHNRPP
Trigger: GGGAGGTCTGTTGTGGAACCAATCCTGACAATGCTG...ATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520148.1
3UTR CAA 72 bp GAGGTAAGATGGAAGCTGGTTTCCTCTTGTGTCAACTaGGGCAATGGGGATAGTCAGTCTAGTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: EVRWKLVSSCVN*GNGDSQSSEHV
Trigger: AACATGTTCACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCCATCTTACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCGTCGTTGAATTCCCCTaGAATAAGTACTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCVVEFP*NKYFLS
Trigger: GGAGAGGAAGTACTTATTTCAGGGGAATTCAACGAC...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp GGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGTCAGTCTAGTGGGTTTGGAAATGGAGTaGGTGATAAACCATCATTAT +
Preference number: 4 (lower is better)
Translates to: GSWFPLVSTWAMGIVSLVGLEME*VINHHY
Trigger: ATAATGATGGTTTATCACTCACTCCATTTCCAAACC...CACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp ATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACAGGGAATTCTGCCAATCATCACATCACACTGAATTaGATGAACCTTATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: ICEFFYSPQATTGNSANHHITLN*MNLISS
Trigger: ACTGGAAATAAGGTTCATGCAATTCAGTGTGATGTG...ATGATTGGCAGAATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR GCA 90 bp CTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACACATCACACTGAATTaGATGAACCTTATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LQRKAARFASSSTVPRRPHITLN*MNLISS
Trigger: ACTGGAAATAAGGTTCATGCAATTCAGTGTGATGTG...TGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR GCA 90 bp TGTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATCATGGCTTCCACACCTaGTTTGGCAGAAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: CFEPYQDPSHHTELHEPYHGFHT*FGRSTW
Trigger: CCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCATG...ATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517314.5
CDS-3UTR GCA 90 bp GCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTGACCATGGCTTCCACACCTaGTTTGGCAGAAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: AALFITILGCPATLISSDHGFHT*FGRSTW
Trigger: CCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGCCATG...GTCAGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR GCA 90 bp AAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGCATTAGGAGAACAGCTGCAAGAGACTTaGTCATGGCTTCCACACCTG +
Preference number: 4 (lower is better)
Translates to: KAVPFRTMSVMVFQALGEQLQET*SWLPHL
Trigger: CAGGTGTGGAAGCCATGAGCAAGTCTCTTGCAGCTG...TTCTCCTAATGCTTGGAAAACCATAACTGACATAGTTCTAAATGGCACAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000517597.5
CDS-3UTR GCA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCGAAAGCAGCAAGATTTaGGAGTTCTTCTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCESSKI*EFFYSP
Trigger: GGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTC...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp CAGACGGCTAAAGGCACCTTTGGTTTTTATAGGCCCTGGTTGAATCACATTGAAGAAAGCAGCAAGATTTaGGAGTTCTTCTACAGTCCC +
Preference number: 4 (lower is better)
Translates to: QTAKGTFGFYRPWLNHIEESSKI*EFFYSP
Trigger: GGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTC...TTCAATGTGATTCAACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR TCA 90 bp CTTCTACAGTCCCCAGGCGACCACAGGGAATTCTGCCAATCATTTCTTTCTCAACTGGTTGAATCACATTaGATCGCATTCCATATTTAC +
Preference number: 4 (lower is better)
Translates to: LLQSPGDHREFCQSFLSQLVESH*IAFHIY
Trigger: GTAAATATGGAATGCGATTCAATGTGATTCAACCAG...TTGAGAAAGAAATGATTGGCAGAATTCCCTGTGGTCGCCTGGGGACTGTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR TCA 90 bp CCCTTTTCTGTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTGTCGTTGAATTCCCCTaGAATAAGTACTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PFSVTKMKAKVVLGTFCLVVEFP*NKYFLS
Trigger: GGAGAGGAAGTACTTATTTCAGGGGAATTCAACGAC...AAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTACAGAAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000520148.1
CDS-3UTR GCA 90 bp CTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCAAGAAGAAATTTGTTCTaGGGTAGCTTTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: LQRKAARFASSSTVPRRPRRNLF*GSFQNI
Trigger: GATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCT...TGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR GCA 90 bp GGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGTCAGTCTAGTGAGTAATAGAAAGAAATaGTGCTCCTTTCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: GSWFPLVSTWAMGIVSLVSNRKK*CSFLCF
Trigger: AAAGCACAGAAAGGAGCAGCATTTCTTTCTATTACT...CACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp ACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACAAGTAATAGAAAGAAATaGTGCTCCTTTCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: TKESSKICEFFYSPQATTSNRKK*CSFLCF
Trigger: AAAGCACAGAAAGGAGCAGCATTTCTTTCTATTACT...TGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517597.5
CDS-3UTR GCA 90 bp CTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGTTTACCCCATTCAGCTaGAAGAGACCTTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LVSRRLCHLELCQLWFSKFTPFS*KRPFCA
Trigger: AGCACAGAAAGGTCTCTTGCAGCTGAATGGGGTAAA...CTTGGAAAACCATAACTGACATAGTTCTAAATGGCACAGCCTTCGTGACACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519328.5
CDS-3UTR GCA 90 bp TTCCCTGAGCCACCAACTGTATTAGTTATGTTCAGCAACAGGATTGACAAGGAAAAGGAAGTACTTACTTaGTCATGGCTTCCACACCTG +
Preference number: 4 (lower is better)
Translates to: FPEPPTVLVMFSNRIDKEKEVLT*SWLPHL
Trigger: CAGGTGTGGAAGCCATGAGCAAGTAAGTACTTCCTT...TTCCTTGTCAATCCTGTTGCTGAACATAACTAATACAGTTGGTGGCTCAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521603.5
CDS-3UTR CCA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTCATCCATCTTCCGGCTaGCTATCACGCACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: AMLNYESMKPLSFINYPVHPSSG*LSRTEH
Trigger: GTGCTCAGTGCGTGATAGCCAGCCGGAAGATGGATG...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CCA 90 bp TGTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATGAAAAGCATTTCGGCTaGCTATCACGCACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: CFEPYQDPSHHTELHEPYEKHFG*LSRTEH
Trigger: GTGCTCAGTGCGTGATAGCCAGCCGAAATGCTTTTC...ATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518725.5
3UTR CAA 72 bp ACGGCTAAAGGCACCTTTGGTTTTTATAGGCCCTGGTaGAATCACATTGAATCGCATTCCATATTTACCCCA +
Preference number: 4 (lower is better)
Translates to: TAKGTFGFYRPW*NHIESHSIFTP
Trigger: TGGGGTAAATATGGAATGCGATTCAATGTGATTCAACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR TCA 90 bp AAGCATAATCACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCGATGTCCTGCAACTTTaGTCAGTTCTGACACAGTGT +
Preference number: 4 (lower is better)
Translates to: KHNHYKGKQQDLRVLLQSDVLQL*SVLTQC
Trigger: ACACTGTGTCAGAACTGATCAAAGTTGCAGGACATC...GGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGATTATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR TCA 90 bp GGTTTTTATAGGCCCTGGTTGAATCACATTGAATCGCATTCCATATTTACCCCAGTCGTTGAATTCCCCTaGAATAAGTACTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GFYRPWLNHIESHSIFTPVVEFP*NKYFLS
Trigger: GGAGAGGAAGTACTTATTTCAGGGGAATTCAACGAC...TGGGGTAAATATGGAATGCGATTCAATGTGATTCAACCAGGGCCTATAAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR GCA 90 bp AATTCTGCCAATCATTTCTTTCTCAAATGTTCCAGTTGGGTCCAGACGGCTAAAGTGTCACGAAGGCTGTaGCATTTAGAACTATGTCAG +
Preference number: 4 (lower is better)
Translates to: NSANHFFLKCSSWVQTAKVSRRL*HLELCQ
Trigger: CTGACATAGTTCTAAATGGCACAGCCTTCGTGACAC...TTTAGCCGTCTGGACCCAACTGGAACATTTGAGAAAGAAATGATTGGCAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR GCA 90 bp ATCACATTGAATCGCATTCCATATTTACCCCATTCAGCTGCAAGAGACCTTTCTGTGTCACGAAGGCTGTaGCATTTAGAACTATGTCAG +
Preference number: 4 (lower is better)
Translates to: ITLNRIPYLPHSAARDLSVSRRL*HLELCQ
Trigger: CTGACATAGTTCTAAATGGCACAGCCTTCGTGACAC...AGAAAGGTCTCTTGCAGCTGAATGGGGTAAATATGGAATGCGATTCAATGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519328.5
CDS-3UTR GCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTCAGCTGCAAGAGACTTaGTCATGGCTTCCACACCTG +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTIQLQET*SWLPHL
Trigger: CAGGTGTGGAAGCCATGAGCAAGTCTCTTGCAGCTG...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp GCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTGACTTTACCCCATTCAGCTaGAAGAGACTTGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: AALFITILGCPATLISSDFTPFS*KRLAHG
Trigger: GCCATGAGCAAGTCTCTTGCAGCTGAATGGGGTAAA...GTCAGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517597.5
CDS-3UTR CCA 90 bp GTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATGAGTGGCTATCACTGGCCTaGCACATAATACATATTCAA +
Preference number: 4 (lower is better)
Translates to: VTKMKAKVVLGTFCLPDEWLSLA*HIIHIQ
Trigger: TTGAATATGTATTATGTGCCAGGCCAGTGATAGCCA...CTCATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520148.1
CDS-3UTR TCA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCGGTAGCATCGCTTTTTaGAGAGGTGAAAAGAATTTA +
Preference number: 4 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCGSIAF*RGEKNL
Trigger: TAAATTCTTTTCACCTCTTCAAAAAGCGATGCTACC...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp GTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATGAGACCTTATTTCCAGTTTaGGAAGAAATTTGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: VTKMKAKVVLGTFCLPDETLFPV*EEICSA
Trigger: CGCAGAACAAATTTCTTCTCAAACTGGAAATAAGGT...CTCATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517597.5
CDS-3UTR TCA 90 bp GCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTGACTCTGACACAGTGTTTTaGACCATATCAGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: AALFITILGCPATLISSDSDTVF*TISGSL
Trigger: GAGGGATCCTGATATGGTTCAAAACACTGTGTCAGA...GTCAGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR TCA 90 bp TGTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATTCTGACACAGTGTTTTaGACCATATCAGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: CFEPYQDPSHHTELHEPYSDTVF*TISGSL
Trigger: GAGGGATCCTGATATGGTTCAAAACACTGTGTCAGA...ATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
CDS-3UTR TCA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCCTGGTTGAATCACATTaGATCGCATTCCATATTTAC +
Preference number: 4 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCLVESH*IAFHIY
Trigger: GTAAATATGGAATGCGATTCAATGTGATTCAACCAG...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp AGAAGCATAATCACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTGTCGTTGAATTCCCCTaGAATAAGTACTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RSIITTKESSKICEFFYSVVEFP*NKYFLS
Trigger: GGAGAGGAAGTACTTATTTCAGGGGAATTCAACGAC...ACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGATTATGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR GCA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCCACATCACACTGAATTaGATGAACCTTATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCHITLN*MNLISS
Trigger: ACTGGAAATAAGGTTCATGCAATTCAGTGTGATGTG...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp CCTGCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTGTGTCACGAAGGCTGTaGCATTTAGAACTATGTCAG +
Preference number: 4 (lower is better)
Translates to: PAALFITILGCPATLISSVSRRL*HLELCQ
Trigger: CTGACATAGTTCTAAATGGCACAGCCTTCGTGACAC...AGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR GCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTTCTATGGTGTCCCACTaGTCCTTGGTGACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTISMVSH*SLVTFL
Trigger: GAGAAAGGTCACCAAGGAGCAGTGGGACACCATAGA...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CCA 90 bp TTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTACTGAGCACCTAGGCTaGACAGAAGAGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: LVVFQFLVSRRLCHLELCTEHLG*TEELSF
Trigger: GAATGACAACTCTTCTGTCCAGCCTAGGTGCTCAGT...ACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517314.5
CDS-3UTR CCA 90 bp TTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCTTCCACACCTGCTTTaGCAGAAGCACTTGGTACTA +
Preference number: 4 (lower is better)
Translates to: LVVFQFLVSRRLCHLELCLPHLL*QKHLVL
Trigger: TAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAG...ACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR CCA 90 bp GCTTTAATTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGACTTCCACACCTGCTTTaGCAGAAGCACTTGGTACTA +
Preference number: 4 (lower is better)
Translates to: ALISCFPISSVTKAVPFRLPHLL*QKHLVL
Trigger: TAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAG...TCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAATTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR CCA 90 bp AAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATGAGTTCTTCGGTTTTTATAGGCCCTaGTTGAATCACATTGAATCG +
Preference number: 4 (lower is better)
Translates to: KMKAKVVLGTFCLPDEFFGFYRP*LNHIES
Trigger: CGATTCAATGTGATTCAACCAGGGCCTATAAAAACC...GAAGAACTCATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000517597.5
ENST00000519328.5
ENST00000520148.1
CDS-3UTR CCA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTTTGGTGAGAGGTGGGTaGGAAGGTGGGTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: AMLNYESMKPLSFINYPVLVRGG*EGGFGN
Trigger: ATTTCCAAACCCACCTTCCCACCCACCTCTCACCAA...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp TCTGTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATAACTTTGATCAGTTCTaGCACAGTGTTTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: SVTKMKAKVVLGTFCLPDNFDQF*HSVLNH
Trigger: ATGGTTCAAAACACTGTGTCAGAACTGATCAAAGTT...ATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517597.5
CDS-3UTR TCA 90 bp GCTTTAATTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAGATGTCCTGCAACTTTaGTCAGTTCTGACACAGTGT +
Preference number: 4 (lower is better)
Translates to: ALISCFPISSVTKAVPFRDVLQL*SVLTQC
Trigger: ACACTGTGTCAGAACTGATCAAAGTTGCAGGACATC...TCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAATTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR TCA 90 bp AGTTTGAGAAGAAATTTGTTCTGCGGTAGCTTTCAAAACATCCATCTTCCTAGAGATGTCCTGCAACTTTaGTCAGTTCTGACACAGTGT +
Preference number: 4 (lower is better)
Translates to: SLRRNLFCGSFQNIHLPRDVLQL*SVLTQC
Trigger: ACACTGTGTCAGAACTGATCAAAGTTGCAGGACATC...TCTAGGAAGATGGATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCTCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518725.5
CDS-3UTR TCA 90 bp CCTGCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTTGGTACTACAAAACCTaGACCAGTCTCAGCATAGAT +
Preference number: 4 (lower is better)
Translates to: PAALFITILGCPATLISSWYYKT*TSLSID
Trigger: ATCTATGCTGAGACTGGTTCAGGTTTTGTAGTACCA...AGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR TCA 90 bp AATGACTGCTCCATTAATCCAAGAAGCATAATCACTACAAAGGAAAGCAGCAAGTGGTACTACAAAACCTaGACCAGTCTCAGCATAGAT +
Preference number: 4 (lower is better)
Translates to: NDCSINPRSIITTKESSKWYYKT*TSLSID
Trigger: ATCTATGCTGAGACTGGTTCAGGTTTTGTAGTACCA...CTTGCTGCTTTCCTTTGTAGTGATTATGCTTCTTGGATTAATGGAGCAGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517597.5
CDS-3UTR TCA 90 bp AAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGCATTAGGAGAATGGTACTACAAAACCTaGACCAGTCTCAGCATAGAT +
Preference number: 4 (lower is better)
Translates to: KAVPFRTMSVMVFQALGEWYYKT*TSLSID
Trigger: ATCTATGCTGAGACTGGTTCAGGTTTTGTAGTACCA...TTCTCCTAATGCTTGGAAAACCATAACTGACATAGTTCTAAATGGCACAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR TCA 90 bp CCCTTTTCTGTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCTGGTTGAATCACATTaGATCGCATTCCATATTTAC +
Preference number: 4 (lower is better)
Translates to: PFSVTKMKAKVVLGTFCLLVESH*IAFHIY
Trigger: GTAAATATGGAATGCGATTCAATGTGATTCAACCAG...AAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTACAGAAAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000520148.1
CDS-3UTR TCA 90 bp GGTTTTTATAGGCCCTGGTTGAATCACATTGAATCGCATTCCATATTTACCCCATTTATAGGCCCTGGTTaGATCACATTGAATCGCATT +
Preference number: 4 (lower is better)
Translates to: GFYRPWLNHIESHSIFTPFIGPG*ITLNRI
Trigger: AATGCGATTCAATGTGATTCAACCAGGGCCTATAAA...TGGGGTAAATATGGAATGCGATTCAATGTGATTCAACCAGGGCCTATAAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR TCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTTGCTACCGCCACCATTaGGTTTCTCCTGATTTTCCA +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTICYRHH*VSPDFP
Trigger: TGGAAAATCAGGAGAAACTCAATGGTGGCGGTAGCA...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp GCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTGACGTTCAGCAACAGGATTaGCAAGGAAGTACTTACTTG +
Preference number: 4 (lower is better)
Translates to: AALFITILGCPATLISSDVQQQD*QGSTYL
Trigger: CAAGTAAGTACTTCCTTGTCAATCCTGTTGCTGAAC...GTCAGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521603.5
CDS-3UTR TCA 90 bp GTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGCATTAGGAGAAAGTCTTAGGAATACAGTTCCCTaGGCCACCAACTGTATTAGT +
Preference number: 4 (lower is better)
Translates to: VPFRTMSVMVFQALGESLRNTVP*ATNCIS
Trigger: ACTAATACAGTTGGTGGCTCAGGGAACTGTATTCCT...AAGACTTTCTCCTAATGCTTGGAAAACCATAACTGACATAGTTCTAAATGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521603.5
CDS-3UTR GCA 90 bp TTATGTTCAGCAACAGGATTGACAAGGAAGTACTTACTTGCTCATGGCTTCCACCACATCACACTGAATTaGATGAACCTTATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LCSATGLTRKYLLAHGFHHITLN*MNLISS
Trigger: ACTGGAAATAAGGTTCATGCAATTCAGTGTGATGTG...GTGGAAGCCATGAGCAAGTAAGTACTTCCTTGTCAATCCTGTTGCTGAACATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521603.5
CDS-3UTR GCA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCGTCAAATTTAATGACTaGTCCATTAATCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCVKFND*SINPRS
Trigger: GCTTCTTGGATTAATGGAGCAGTCATTAAATTTGAC...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTACAGCTGGGATGGCATaGTATCTCTTAGGCATCACA +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTITAGMA*YLLGIT
Trigger: TGTGATGCCTAAGAGATAGCATGCCATCCCAGCTGT...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CCA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTACTGAGCACCTAGGCTaGACAGAAGAGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: AMLNYESMKPLSFINYPVTEHLG*TEELSF
Trigger: GAATGACAACTCTTCTGTCCAGCCTAGGTGCTCAGT...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CCA 90 bp AACCTTATTTCCAGTTTGAGAAGAAATTTGTTCTGCGGTAGCTTTCAAAACATCACTGAGCACCTAGGCTaGACAGAAGAGTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: NLISSLRRNLFCGSFQNITEHLG*TEELSF
Trigger: GAATGACAACTCTTCTGTCCAGCCTAGGTGCTCAGT...GATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCTCAAACTGGAAATAAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
CDS-3UTR CCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTCTTCCACACCTGCTTTaGCAGAAGCACTTGGTACTA +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTILPHLL*QKHLVL
Trigger: TAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAG...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CCA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCGAAAGTCAGTATAATTaGAAATGTTGGGCCACTTAT +
Preference number: 4 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCESQYN*KCWATY
Trigger: ATAAGTGGCCCAACATTTCCAATTATACTGACTTTC...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATATATGGCTATACTGGTaGAATCAGTGGAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: HRISTKGKMETRYLSAFYIWLYW*NQWRER
Trigger: TCTTTCCCTCCACTGATTCCACCAGTATAGCCATAT...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp AACCTTATTTCCAGTTTGAGAAGAAATTTGTTCTGCGGTAGCTTTCAAAACATCTTTTTGTCCCATAACTaGAAAACCTCCGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: NLISSLRRNLFCGSFQNIFLSHN*KTSEER
Trigger: TCGCTCCTCGGAGGTTTTTCAGTTATGGGACAAAAA...GATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCTCAAACTGGAAATAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518725.5
CDS-3UTR TCA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTTCTGACACAGTGTTTTaGACCATATCAGGATCCCTC +
Preference number: 4 (lower is better)
Translates to: AMLNYESMKPLSFINYPVSDTVF*TISGSL
Trigger: GAGGGATCCTGATATGGTTCAAAACACTGTGTCAGA...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp CCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTAACTTTGATCAGTTCTaGCACAGTGTTTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: PISSVTKAVPFRTMSVMVNFDQF*HSVLNH
Trigger: ATGGTTCAAAACACTGTGTCAGAACTGATCAAAGTT...AACCATAACTGACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR TCA 90 bp AAAATTCCCTGCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATGATGTCCTGCAACTTTaGTCAGTTCTGACACAGTGT +
Preference number: 4 (lower is better)
Translates to: KIPCCIVYHNIRMSCNFDDVLQL*SVLTQC
Trigger: ACACTGTGTCAGAACTGATCAAAGTTGCAGGACATC...ATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGGGAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR TCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATTTTATAGGCCCTGGTTaGATCACATTGAATCGCATT +
Preference number: 4 (lower is better)
Translates to: HRISTKGKMETRYLSAFYFIGPG*ITLNRI
Trigger: AATGCGATTCAATGTGATTCAACCAGGGCCTATAAA...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp CTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGAGAAGAAATTTGTTCTaGGGTAGCTTTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: LVSRRLCHLELCQLWFSKRRNLF*GSFQNI
Trigger: GATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCT...CTTGGAAAACCATAACTGACATAGTTCTAAATGGCACAGCCTTCGTGACACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR GCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTGTGTCACGAAGGCTGTaGCATTTAGAACTATGTCAG +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTIVSRRL*HLELCQ
Trigger: CTGACATAGTTCTAAATGGCACAGCCTTCGTGACAC...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp TTATGTTCAGCAACAGGATTGACAAGGAAGTACTTACTTGCTCATGGCTTCCACAGTAATAGAAAGAAATaGTGCTCCTTTCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LCSATGLTRKYLLAHGFHSNRKK*CSFLCF
Trigger: AAAGCACAGAAAGGAGCAGCATTTCTTTCTATTACT...GTGGAAGCCATGAGCAAGTAAGTACTTCCTTGTCAATCCTGTTGCTGAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521603.5
CDS-3UTR CCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATGGTTTTTATAGGCCCTaGTTGAATCACATTGAATCG +
Preference number: 4 (lower is better)
Translates to: HRISTKGKMETRYLSAFYGFYRP*LNHIES
Trigger: CGATTCAATGTGATTCAACCAGGGCCTATAAAAACC...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CCA 90 bp CCTGCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTGGTTTTTATAGGCCCTaGTTGAATCACATTGAATCG +
Preference number: 4 (lower is better)
Translates to: PAALFITILGCPATLISSGFYRP*LNHIES
Trigger: CGATTCAATGTGATTCAACCAGGGCCTATAAAAACC...AGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATGTTGTAACTGACTCCTaGGAAAGCAAAATGGACATT +
Preference number: 4 (lower is better)
Translates to: HRISTKGKMETRYLSAFYVVTDS*ESKMDI
Trigger: AATGTCCATTTTGCTTTCCCAGGAGTCAGTTACAAC...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp TGTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATGGTAGCATCGCTTTTTaGAGAGGTGAAAAGAATTTA +
Preference number: 4 (lower is better)
Translates to: CFEPYQDPSHHTELHEPYGSIAF*RGEKNL
Trigger: TAAATTCTTTTCACCTCTTCAAAAAGCGATGCTACC...ATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000518725.5
CDS-3UTR TCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATACCTTATTTCCAGTTTaGGAAGAAATTTGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: HRISTKGKMETRYLSAFYTLFPV*EEICSA
Trigger: CGCAGAACAAATTTCTTCTCAAACTGGAAATAAGGT...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp CATTCCATATTTACCCCATTCAGCTGCAAGAGACCTTTCTGTGCTTTAATTAGTACCTTATTTCCAGTTTaGGAAGAAATTTGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: HSIFTPFSCKRPFCALISTLFPV*EEICSA
Trigger: CGCAGAACAAATTTCTTCTCAAACTGGAAATAAGGT...ACTAATTAAAGCACAGAAAGGTCTCTTGCAGCTGAATGGGGTAAATATGGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519328.5
CDS-3UTR TCA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATAACTTTGATCAGTTCTaGCACAGTGTTTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: HRISTKGKMETRYLSAFYNFDQF*HSVLNH
Trigger: ATGGTTCAAAACACTGTGTCAGAACTGATCAAAGTT...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp GTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATTCACATCACACTGAATTaGATGAACCTTATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VLNHIRIPHITLNCMNLIHITLN*MNLISS
Trigger: ACTGGAAATAAGGTTCATGCAATTCAGTGTGATGTG...AATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
CDS-3UTR GCA 90 bp TGTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATCACATCACACTGAATTaGATGAACCTTATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CFEPYQDPSHHTELHEPYHITLN*MNLISS
Trigger: ACTGGAAATAAGGTTCATGCAATTCAGTGTGATGTG...ATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
CDS-3UTR CCA 90 bp TTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTGACACAGTGGGTTTTTATAGGCCCTaGTTGAATCACATTGAATCG +
Preference number: 4 (lower is better)
Translates to: LFITILGCPATLISSDTVGFYRP*LNHIES
Trigger: CGATTCAATGTGATTCAACCAGGGCCTATAAAAACC...CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTTCAGATGAGGTAAGATaGAAGCTGGTTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTISDEVR*KLVSSC
Trigger: ACAAGAGGAAACCAGCTTCCATCTTACCTCATCTGA...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CCA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTGTTTCCATGGGCTTGTaGCAGATTTATTCAGATGAG +
Preference number: 4 (lower is better)
Translates to: AMLNYESMKPLSFINYPVVSMGL*QIYSDE
Trigger: CTCATCTGAATAAATCTGCCACAAGCCCATGGAAAC...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp GCTTTAATTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACCTTATTTCCAGTTTaGGAAGAAATTTGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: ALISCFPISSVTKAVPFRTLFPV*EEICSA
Trigger: CGCAGAACAAATTTCTTCTCAAACTGGAAATAAGGT...TCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAATTAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR TCA 90 bp AGTTTGAGAAGAAATTTGTTCTGCGGTAGCTTTCAAAACATCCATCTTCCTAGAACCTTATTTCCAGTTTaGGAAGAAATTTGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SLRRNLFCGSFQNIHLPRTLFPV*EEICSA
Trigger: CGCAGAACAAATTTCTTCTCAAACTGGAAATAAGGT...TCTAGGAAGATGGATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCTCAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518725.5
CDS-3UTR TCA 90 bp TTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTGACACAGTGACCTTATTTCCAGTTTaGGAAGAAATTTGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: LFITILGCPATLISSDTVTLFPV*EEICSA
Trigger: CGCAGAACAAATTTCTTCTCAAACTGGAAATAAGGT...CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR TCA 90 bp GTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGCATTAGGAGAAAGTCTTAACTTTGATCAGTTCTaGCACAGTGTTTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: VPFRTMSVMVFQALGESLNFDQF*HSVLNH
Trigger: ATGGTTCAAAACACTGTGTCAGAACTGATCAAAGTT...AAGACTTTCTCCTAATGCTTGGAAAACCATAACTGACATAGTTCTAAATGGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR TCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTAAGTCTCACGAGATCTaGTGGTTTTATAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTIKSHEI*WFYKWE
Trigger: CTCCCATTTATAAAACCATCAGATCTCGTGAGACTT...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp CCTGCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTAGAAGAAATTTGTTCTaGGGTAGCTTTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: PAALFITILGCPATLISSRRNLF*GSFQNI
Trigger: GATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCT...AGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR GCA 90 bp GTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATTAGAAGAAATTTGTTCTaGGGTAGCTTTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: VLNHIRIPHITLNCMNLIRRNLF*GSFQNI
Trigger: GATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCT...AATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
CDS-3UTR GCA 90 bp GCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTGACGTCAAATTTAATGACTaGTCCATTAATCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: AALFITILGCPATLISSDVKFND*SINPRS
Trigger: GCTTCTTGGATTAATGGAGCAGTCATTAAATTTGAC...GTCAGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTTGGCTATCACTGGCCTaGCACATAATACATATTCAA +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTIWLSLA*HIIHIQ
Trigger: TTGAATATGTATTATGTGCCAGGCCAGTGATAGCCA...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTTTCTTCTTTTACAGCTaGGATGGCATGCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTIFFFYS*DGMLSL
Trigger: AAGAGATAGCATGCCATCCCAGCTGTAAAAGAAGAA...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CCA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTGTACTAAAGGTAAAATaGAGACTAGGTACCTGTCTG +
Preference number: 4 (lower is better)
Translates to: AMLNYESMKPLSFINYPVVLKVK*RLGTCL
Trigger: CAGACAGGTACCTAGTCTCCATTTTACCTTTAGTAC...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR TCA 90 bp AACCTTATTTCCAGTTTGAGAAGAAATTTGTTCTGCGGTAGCTTTCAAAACATCAACTTTGATCAGTTCTaGCACAGTGTTTTGAACCAT +
Preference number: 4 (lower is better)
Translates to: NLISSLRRNLFCGSFQNINFDQF*HSVLNH
Trigger: ATGGTTCAAAACACTGTGTCAGAACTGATCAAAGTT...GATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCTCAAACTGGAAATAAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
CDS-3UTR TCA 90 bp ATAAAATTCCCTGCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGCTGGTTGAATCACATTaGATCGCATTCCATATTTAC +
Preference number: 4 (lower is better)
Translates to: IKFPAALFITILGCPATLLVESH*IAFHIY
Trigger: GTAAATATGGAATGCGATTCAATGTGATTCAACCAG...CAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGGGAATTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR GCA 90 bp TTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTGTCAAATTTAATGACTaGTCCATTAATCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LVVFQFLVSRRLCHLELCVKFND*SINPRS
Trigger: GCTTCTTGGATTAATGGAGCAGTCATTAAATTTGAC...ACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
3UTR CAA 72 bp GTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTaGGGTTATGTCTTTATTAGCAGCATGAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: VNETSFFYKLPS*GYVFISSMRTD
Trigger: GTCTGTTCTCATGCTGCTAATAAAGACATAACCCAAACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp GAAATGTTGGGCCACTTATTCCAAACCTATAACATCCCCTATATATACACAATTAGAAGAAATTTGTTCTaGGGTAGCTTTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: EMLGHLFQTYNIPYIYTIRRNLF*GSFQNI
Trigger: GATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCT...AATTGTGTATATATAGGGGATGTTATAGGTTTGGAATAAGTGGCCCAACATTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR GCA 90 bp AAAATTCCCTGCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATAGTAATAGAAAGAAATaGTGCTCCTTTCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KIPCCIVYHNIRMSCNFDSNRKK*CSFLCF
Trigger: AAAGCACAGAAAGGAGCAGCATTTCTTTCTATTACT...ATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGGGAATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR GCA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTTTGAGAGTATTGTATTaGAAGCATGTGGAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: AMLNYESMKPLSFINYPVLRVLY*KHVEKK
Trigger: CTTTTTCTCCACATGCTTGCAATACAATACTCTCAA...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS GCA 90 bp CAGCAGGAATCAGCTCTTCTTCTCACCTTCATATCCCTAGTAAGGTaGCCTCCGAGGAGCGAGGCCACAGGGCAGCCGGGACCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: QQESALLLTFISLVR*PPRSEATGQPGPQS
Trigger: ACTCTGGGGTCCCGGCTGCCCTGTGGCCTCGCTCCTCGGAGGGCACCTTACTAGGGATATGAAGGTGAGAAGAAGAGCTGATTCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519410.5
CDS GCA 90 bp GTCTTCTTCCTTTTGGGAGCCAGCTGCCTTCAGAGGACAATGTTCTaGCCTCCTCCAGAGTTATGTAAGTCCGCCTACTTCGGGAGATCC +
Preference number: 5 (lower is better)
Translates to: VFFLLGASCLQRTMF*PPPELCKSAYFGRS
Trigger: GGATCTCCCGAAGTAGGCGGACTTACATAACTCTGGAGGAGGGCAGAACATTGTCCTCTGAAGGCAGCTGGCTCCCAAAAGGAAGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000520227.1
ENST00000520859.5
ENST00000521668.1
ENST00000522161.5
CDS CCA 90 bp AAACATCCATCTTCCGGCTGGCTATCACGCACTGAGCACCTAGGCTaGACAGAAGAGTTGTCATTCCTTTACCAAGGCCAGTACCTCCCC +
Preference number: 5 (lower is better)
Translates to: KHPSSGWLSRTEHLG*TEELSFLYQGQYLP
Trigger: GGGGAGGTACTGGCCTTGGTAAAGGAATGACAACTCTTCTGTCCAGCCTAGGTGCTCAGTGCGTGATAGCCAGCCGGAAGATGGATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220764.7
ENST00000517314.5
ENST00000517761.5
ENST00000519007.5
ENST00000519410.5
ENST00000520227.1
ENST00000522161.5
ENST00000522583.1
CDS TCA 90 bp TTACCAAGGCCAGTACCTCCCCCAGTAATGAATGCCACTTTTCCTTaGAAACTATTAGGTGGTAGCATCGCCTCCGAGGAGCGAGGCCAC +
Preference number: 5 (lower is better)
Translates to: LPRPVPPPVMNATFP*KLLGGSIASEERGH
Trigger: GTGGCCTCGCTCCTCGGAGGCGATGCTACCACCTAATAGTTTTCAAGGAAAAGTGGCATTCATTACTGGGGGAGGTACTGGCCTTGGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517314.5
CDS-3UTR CAA 90 bp GATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACAGGGAATTCTGCCAATCATCAGCTGCAAGAGACTaGCTCATGGCTTCCACACCT +
Preference number: 5 (lower is better)
Translates to: DLRVLLQSPGDHREFCQSSAARD*LMASTP
Trigger: AGGTGTGGAAGCCATGAGCAAGTCTCTTGCAGCTGA...TGATTGGCAGAATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517597.5
CDS-3UTR CAA 90 bp TTCTTCTACAGTCCCCAGGCGACCACAGGGAATTCTGCCAATCATTTCTTTCTCGCCGGTAGCTTCATGTaGAGTCTCCAGAACTCGGGC +
Preference number: 5 (lower is better)
Translates to: FFYSPQATTGNSANHFFLAGSFM*SLQNSG
Trigger: GCCCGAGTTCTGGAGACTCAACATGAAGCTACCGGC...GAGAAAGAAATGATTGGCAGAATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519328.5
CDS CCA 90 bp AAAGAAAAGCATTTCGGCTGGCTATCACGCACTGAGCACCTAGGCTaGACAGAAGAGTTGTCATTCCTTTACCAAGGCCAGTACCTCCCC +
Preference number: 5 (lower is better)
Translates to: KEKHFGWLSRTEHLG*TEELSFLYQGQYLP
Trigger: GGGGAGGTACTGGCCTTGGTAAAGGAATGACAACTCTTCTGTCCAGCCTAGGTGCTCAGTGCGTGATAGCCAGCCGAAATGCTTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518725.5
CDS-3UTR CAA 90 bp GGAAGCTGGTTTCCTCTTGTGTCAACTTGGGCAATGGGGATAGTCAGTCTAGTGTCAGCTGCAAGAGACTaGCTCATGGCTTCCACACCT +
Preference number: 5 (lower is better)
Translates to: GSWFPLVSTWAMGIVSLVSAARD*LMASTP
Trigger: AGGTGTGGAAGCCATGAGCAAGTCTCTTGCAGCTGA...CACTAGACTGACTATCCCCATTGCCCAAGTTGACACAAGAGGAAACCAGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS TCA 90 bp ATGAGCAGGAGATGCTTCTTCCCCAGTCCTGACATCTCCCTACTGTaGGAAGTTCAGGTAGTACAACTCCAGGCTTCTTTCTGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: MSRRCFFPSPDISLL*EVQVVQLQASFCPL
Trigger: AAGGGGACAGAAAGAAGCCTGGAGTTGTACTACCTGAACTTCTCACAGTAGGGAGATGTCAGGACTGGGGAAGAAGCATCTCCTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522161.5
CDS GCA 90 bp GGGTATGAACAGTTCTCCTTGGTCTTCTTCCTTTTGGGAGCCAGCTaGCTTCAGAGGACAATGTTCTGCCCTCCTCCAGAGTTATGTAAG +
Preference number: 5 (lower is better)
Translates to: GYEQFSLVFFLLGAS*LQRTMFCPPPELCK
Trigger: CTTACATAACTCTGGAGGAGGGCAGAACATTGTCCTCTGAAGGCAGCTGGCTCCCAAAAGGAAGAAGACCAAGGAGAACTGTTCATACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000520227.1
ENST00000520859.5
ENST00000521668.1
ENST00000522161.5
CDS-3UTR CAA 90 bp ATCACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGGCTTCCACACCTGCTTaGGCAGAAGCACTTGGTACT +
Preference number: 5 (lower is better)
Translates to: ITTKESSKICEFFYSPQAASTPA*AEALGT
Trigger: AGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGC...CGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517597.5
CDS-3UTR CAA 90 bp ACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCCGGCTAAAGGCACCTTaGGTTTTTATAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: TTKESSKICEFFYSPQATRLKAP*VFIGPG
Trigger: ACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCG...GGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CAA 90 bp GAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACAGGGAATGGAAAGCAGCAAGATTaGCGAGTTCTTCTACAGTCC +
Preference number: 5 (lower is better)
Translates to: ESSKICEFFYSPQATTGNGKQQD*RVLLQS
Trigger: GGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCC...ATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CAA 90 bp CTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCAGGAAAGCAGCAAGATTaGCGAGTTCTTCTACAGTCC +
Preference number: 5 (lower is better)
Translates to: LQRKAARFASSSTVPRRPGKQQD*RVLLQS
Trigger: GGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCC...TGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CAA 90 bp CAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACCACAGGGAATTCTGCTTTTATAGGCCCTGGTaGAATCACATTGAATCGCAT +
Preference number: 5 (lower is better)
Translates to: QQDLRVLLQSPGDHREFCFYRPW*NHIESH
Trigger: ATGCGATTCAATGTGATTCAACCAGGGCCTATAAAA...GCAGAATTCCCTGTGGTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CAA 90 bp CCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTGCCGGTAGCTTCATGTaGAGTCTCCAGAACTCGGGC +
Preference number: 5 (lower is better)
Translates to: PISSVTKAVPFRTMSVMVAGSFM*SLQNSG
Trigger: GCCCGAGTTCTGGAGACTCAACATGAAGCTACCGGC...AACCATAACTGACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR CAA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCGGCTGGACAGAAGAGTaGTCATTCCTTTACCAAGGC +
Preference number: 5 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCGWTEE*SFLYQG
Trigger: GCCTTGGTAAAGGAATGACAACTCTTCTGTCCAGCC...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CAA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCCGGCTAAAGGCACCTTaGGTTTTTATAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCRLKAP*VFIGPG
Trigger: ACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCG...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CAA 90 bp ACGGCTAAAGGCACCTTTGGTTTTTATAGGCCCTGGTTGAATCACATTGAATCGCGGCTAAAGGCACCTTaGGTTTTTATAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: TAKGTFGFYRPWLNHIESRLKAP*VFIGPG
Trigger: ACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCG...CGATTCAATGTGATTCAACCAGGGCCTATAAAAACCAAAGGTGCCTTTAGCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CAA 90 bp CACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCCAGGCGACTCACATCACACTGAATaGCATGAACCTTATTTCCAG +
Preference number: 5 (lower is better)
Translates to: HYKGKQQDLRVLLQSPGDSHHTE*HEPYFQ
Trigger: CTGGAAATAAGGTTCATGCAATTCAGTGTGATGTGA...GTCGCCTGGGGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CAA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCGGATGTCCTGCAACTTaGATCAGTTCTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCGCPAT*ISSDTV
Trigger: CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCC...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CAA 90 bp TCCATGGGCTTGTGGCAGATTTATTCAGATGAGGTAAGATGGAAGCTGGTTTCCCTTTGGCAGAAGCACTaGGTACTACAAAACCTGAAC +
Preference number: 5 (lower is better)
Translates to: SMGLWQIYSDEVRWKLVSLWQKH*VLQNLN
Trigger: GTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAG...GGAAACCAGCTTCCATCTTACCTCATCTGAATAAATCTGCCACAAGCCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CAA 90 bp GCCACCATTGAGTTTCTCCTGATTTTCCAAGTCACAAAGATCTGTTCTCTCTGCGGGGTTTCCATGGGCTaGTGGCAGATTTATTCAGAT +
Preference number: 5 (lower is better)
Translates to: ATIEFLLIFQVTKICSLCGVSMG*WQIYSD
Trigger: ATCTGAATAAATCTGCCACAAGCCCATGGAAACCCC...GCAGAGAGAACAGATCTTTGTGACTTGGAAAATCAGGAGAAACTCAATGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CAA 90 bp ATACAGTTCCCTGAGCCACCAACTGTATTAGTTATGTTCAGCAACAGGATTGACGGATGTCCTGCAACTTaGATCAGTTCTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: IQFPEPPTVLVMFSNRIDGCPAT*ISSDTV
Trigger: CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCC...GTCAATCCTGTTGCTGAACATAACTAATACAGTTGGTGGCTCAGGGAACTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521603.5
CDS-3UTR CAA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATGCTTCCACACCTGCTTaGGCAGAAGCACTTGGTACT +
Preference number: 5 (lower is better)
Translates to: HRISTKGKMETRYLSAFYASTPA*AEALGT
Trigger: AGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGC...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CAA 90 bp AAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGCATTAGGAGAAGCTTCCACACCTGCTTaGGCAGAAGCACTTGGTACT +
Preference number: 5 (lower is better)
Translates to: KAVPFRTMSVMVFQALGEASTPA*AEALGT
Trigger: AGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGC...TTCTCCTAATGCTTGGAAAACCATAACTGACATAGTTCTAAATGGCACAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR CAA 90 bp GTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCAGTTATCAGCTGCAAGAGACTaGCTCATGGCTTCCACACCT +
Preference number: 5 (lower is better)
Translates to: VFQFLVSRRLCHLELCQLSAARD*LMASTP
Trigger: AGGTGTGGAAGCCATGAGCAAGTCTCTTGCAGCTGA...TAACTGACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000517597.5
CDS-3UTR CAA 90 bp CTTATTTCCAGTTTGAGAAGAAATTTGTTCTGCGGTAGCTTTCAAAACATCCATGCCGGTAGCTTCATGTaGAGTCTCCAGAACTCGGGC +
Preference number: 5 (lower is better)
Translates to: LISSLRRNLFCGSFQNIHAGSFM*SLQNSG
Trigger: GCCCGAGTTCTGGAGACTCAACATGAAGCTACCGGC...ATGGATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCTCAAACTGGAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517314.5
CDS-3UTR CAA 90 bp TCTGTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTTTTGTCTTCCTGATCCCCAAACACACTCTTaGGTTTTTATAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: SVTKMKAKVVLGTFCLPDPQTHS*VFIGPG
Trigger: ACCAGGGCCTATAAAAACCAAAGAGTGTGTTTGGGG...ATCAGGAAGACAAAAGGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520148.1
CDS-3UTR CAA 90 bp ATTTCTATTCCCTTTTCTGTAACCAAGATGAAGGCCAAAGTGGTCTTAGGAACCTCAGCATTGTCAGGATaGGTTCCACAACAGACCTCC +
Preference number: 5 (lower is better)
Translates to: ISIPFSVTKMKAKVVLGTSALSG*VPQQTS
Trigger: GGAGGTCTGTTGTGGAACCAATCCTGACAATGCTGA...GGTTCCTAAGACCACTTTGGCCTTCATCTTGGTTACAGAAAAGGGAATAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520148.1
CDS TCA 90 bp CAACACAGACTGAGGTACAATCTGTCTGTGCAGAGACAGTTGATATaGCTGGTAAATTTTGACAGGATCGTTGGGTATGAACAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: QHRLRYNLSVQRQLI*LVNFDRIVGYEQFS
Trigger: GGAGAACTGTTCATACCCAACGATCCTGTCAAAATTTACCAGTCATATCAACTGTCTCTGCACAGACAGATTGTACCTCAGTCTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000520227.1
ENST00000520859.5
ENST00000521668.1
ENST00000522161.5
CDS-3UTR CAA 90 bp AAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGCATTAGGAGAAGGCTGGACAGAAGAGTaGTCATTCCTTTACCAAGGC +
Preference number: 5 (lower is better)
Translates to: KAVPFRTMSVMVFQALGEGWTEE*SFLYQG
Trigger: GCCTTGGTAAAGGAATGACAACTCTTCTGTCCAGCC...TTCTCCTAATGCTTGGAAAACCATAACTGACATAGTTCTAAATGGCACAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517314.5
CDS-3UTR CAA 90 bp TGTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATGGCTGGACAGAAGAGTaGTCATTCCTTTACCAAGGC +
Preference number: 5 (lower is better)
Translates to: CFEPYQDPSHHTELHEPYGWTEE*SFLYQG
Trigger: GCCTTGGTAAAGGAATGACAACTCTTCTGTCCAGCC...ATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
CDS-3UTR CAA 90 bp CTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGCTTTGGCAGAAGCACTaGGTACTACAAAACCTGAAC +
Preference number: 5 (lower is better)
Translates to: LVSRRLCHLELCQLWFSKLWQKH*VLQNLN
Trigger: GTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAG...CTTGGAAAACCATAACTGACATAGTTCTAAATGGCACAGCCTTCGTGACACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR CAA 90 bp GTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGCATTAGGAGAAAGTCTTGCTTCCACACCTGCTTaGGCAGAAGCACTTGGTACT +
Preference number: 5 (lower is better)
Translates to: VPFRTMSVMVFQALGESLASTPA*AEALGT
Trigger: AGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAGC...AAGACTTTCTCCTAATGCTTGGAAAACCATAACTGACATAGTTCTAAATGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR CAA 90 bp TCCATGGGCTTGTGGCAGATTTATTCAGATGAGGTAAGATGGAAGCTGGTTTCCTTTTATAGGCCCTGGTaGAATCACATTGAATCGCAT +
Preference number: 5 (lower is better)
Translates to: SMGLWQIYSDEVRWKLVSFYRPW*NHIESH
Trigger: ATGCGATTCAATGTGATTCAACCAGGGCCTATAAAA...GGAAACCAGCTTCCATCTTACCTCATCTGAATAAATCTGCCACAAGCCCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CAA 90 bp GTCTTAGGAACCTTTTGTCTTCCTGATGAGTTCTTCTATGGTGTCCCACTGCTCTTTTATAGGCCCTGGTaGAATCACATTGAATCGCAT +
Preference number: 5 (lower is better)
Translates to: VLGTFCLPDEFFYGVPLLFYRPW*NHIESH
Trigger: ATGCGATTCAATGTGATTCAACCAGGGCCTATAAAA...GAGCAGTGGGACACCATAGAAGAACTCATCAGGAAGACAAAAGGTTCCTAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517597.5
ENST00000519328.5
ENST00000520148.1
CDS-3UTR CAA 90 bp CCTGCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGATCAGTTCTGGATGTCCTGCAACTTaGATCAGTTCTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: PAALFITILGCPATLISSGCPAT*ISSDTV
Trigger: CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCC...AGAACTGATCAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR CAA 90 bp GTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATTGGATGTCCTGCAACTTaGATCAGTTCTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: VLNHIRIPHITLNCMNLIGCPAT*ISSDTV
Trigger: CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCC...AATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
CDS-3UTR CAA 90 bp AATGACTGCTCCATTAATCCAAGAAGCATAATCACTACAAAGGAAAGCAGCAAGGGATGTCCTGCAACTTaGATCAGTTCTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: NDCSINPRSIITTKESSKGCPAT*ISSDTV
Trigger: CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCC...CTTGCTGCTTTCCTTTGTAGTGATTATGCTTCTTGGATTAATGGAGCAGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CAA 90 bp AAGCATAATCACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTCCCTTTGGCAGAAGCACTaGGTACTACAAAACCTGAAC +
Preference number: 5 (lower is better)
Translates to: KHNHYKGKQQDLRVLLQSLWQKH*VLQNLN
Trigger: GTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAG...GGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGATTATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517597.5
CDS-3UTR CAA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATGGAAAGCAGCAAGATTaGCGAGTTCTTCTACAGTCC +
Preference number: 5 (lower is better)
Translates to: HRISTKGKMETRYLSAFYGKQQD*RVLLQS
Trigger: GGACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCC...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS TCA 90 bp TGTCCCATAACTGAAAAACATAATGCCATTGGACTCTATGCTTCTTaGCAGCAGGAATCAGCTCTTCTTCTCACCTTCATATCCCTAGTA +
Preference number: 5 (lower is better)
Translates to: CPITEKHNAIGLYAS*QQESALLLTFISLV
Trigger: TACTAGGGATATGAAGGTGAGAAGAAGAGCTGATTCCTGCTGTCAAGAAGCATAGAGTCCAATGGCATTATGTTTTTCAGTTATGGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519410.5
CDS-3UTR CAA 90 bp AAGGCTGTGCCATTTAGAACTATGTCAGTTATGGTTTTCCAAGCATTAGGAGAACTTTGGCAGAAGCACTaGGTACTACAAAACCTGAAC +
Preference number: 5 (lower is better)
Translates to: KAVPFRTMSVMVFQALGELWQKH*VLQNLN
Trigger: GTTCAGGTTTTGTAGTACCAAGTGCTTCTGCCAAAG...TTCTCCTAATGCTTGGAAAACCATAACTGACATAGTTCTAAATGGCACAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000521603.5
CDS-3UTR CAA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTTCCTCTTGTGTCAACTaGGGCAATGGGGATAGTCAG +
Preference number: 5 (lower is better)
Translates to: AMLNYESMKPLSFINYPVSSCVN*GNGDSQ
Trigger: CTGACTATCCCCATTGCCCAAGTTGACACAAGAGGA...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CAA 90 bp TTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGAACTATGTCAAGGAAGTACTTACTaGCTCATGGCTTCCACACCT +
Preference number: 5 (lower is better)
Translates to: LVVFQFLVSRRLCHLELCQGSTY*LMASTP
Trigger: AGGTGTGGAAGCCATGAGCAAGTAAGTACTTCCTTG...ACATAGTTCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521603.5
CDS-3UTR CAA 90 bp ATAAAATTCCCTGCTGCATTGTTTATCACAATATTAGGATGTCCTGCAACTTTGGGATGTCCTGCAACTTaGATCAGTTCTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: IKFPAALFITILGCPATLGCPAT*ISSDTV
Trigger: CACTGTGTCAGAACTGATCAAAGTTGCAGGACATCC...CAAAGTTGCAGGACATCCTAATATTGTGATAAACAATGCAGCAGGGAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR CAA 90 bp TGTTTTGAACCATATCAGGATCCCTCACATCACACTGAATTGCATGAACCTTATTCACATCACACTGAATaGCATGAACCTTATTTCCAG +
Preference number: 5 (lower is better)
Translates to: CFEPYQDPSHHTELHEPYSHHTE*HEPYFQ
Trigger: CTGGAAATAAGGTTCATGCAATTCAGTGTGATGTGA...ATAAGGTTCATGCAATTCAGTGTGATGTGAGGGATCCTGATATGGTTCAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
CDS-3UTR CAA 90 bp AATGACTGCTCCATTAATCCAAGAAGCATAATCACTACAAAGGAAAGCAGCAAGTCACATCACACTGAATaGCATGAACCTTATTTCCAG +
Preference number: 5 (lower is better)
Translates to: NDCSINPRSIITTKESSKSHHTE*HEPYFQ
Trigger: CTGGAAATAAGGTTCATGCAATTCAGTGTGATGTGA...CTTGCTGCTTTCCTTTGTAGTGATTATGCTTCTTGGATTAATGGAGCAGTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CAA 90 bp AGAAGCATAATCACTACAAAGGAAAGCAGCAAGATTTGCGAGTTCTTCTACAGTTTTTATAGGCCCTGGTaGAATCACATTGAATCGCAT +
Preference number: 5 (lower is better)
Translates to: RSIITTKESSKICEFFYSFYRPW*NHIESH
Trigger: ATGCGATTCAATGTGATTCAACCAGGGCCTATAAAA...ACTGTAGAAGAACTCGCAAATCTTGCTGCTTTCCTTTGTAGTGATTATGCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517597.5
ENST00000519328.5
CDS-3UTR CAA 90 bp CACAGGATTAGTACTAAAGGTAAAATGGAGACTAGGTACCTGTCTGCGTTTTATAGTTTGAGAAGAAATTaGTTCTGCGGTAGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: HRISTKGKMETRYLSAFYSLRRN*FCGSFQ
Trigger: TTGAAAGCTACCGCAGAACAAATTTCTTCTCAAACT...ATAAAACGCAGACAGGTACCTAGTCTCCATTTTACCTTTAGTACTAATCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CAA 90 bp GCTTTAATTAGTTGTTTTCCAATTTCTAGTGTCACGAAGGCTGTGCCATTTAGATCACATCACACTGAATaGCATGAACCTTATTTCCAG +
Preference number: 5 (lower is better)
Translates to: ALISCFPISSVTKAVPFRSHHTE*HEPYFQ
Trigger: CTGGAAATAAGGTTCATGCAATTCAGTGTGATGTGA...TCTAAATGGCACAGCCTTCGTGACACTAGAAATTGGAAAACAACTAATTAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517314.5
ENST00000517597.5
ENST00000519328.5
ENST00000521603.5
CDS-3UTR CAA 90 bp GCCATGCTGAACTATGAGTCAATGAAACCTCTTTCTTTTATAAATTACCCAGTTTCACATCACACTGAATaGCATGAACCTTATTTCCAG +
Preference number: 5 (lower is better)
Translates to: AMLNYESMKPLSFINYPVSHHTE*HEPYFQ
Trigger: CTGGAAATAAGGTTCATGCAATTCAGTGTGATGTGA...AACTGGGTAATTTATAAAAGAAAGAGGTTTCATTGACTCATAGTTCAGCATGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220764.7
CDS-3UTR CAA 90 bp AACCTTATTTCCAGTTTGAGAAGAAATTTGTTCTGCGGTAGCTTTCAAAACATCTCACATCACACTGAATaGCATGAACCTTATTTCCAG +
Preference number: 5 (lower is better)
Translates to: NLISSLRRNLFCGSFQNISHHTE*HEPYFQ
Trigger: CTGGAAATAAGGTTCATGCAATTCAGTGTGATGTGA...GATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCTCAAACTGGAAATAAGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000518725.5
CDS CAA 90 bp AGCCGGGACCCCAGAGTAAAGAAAACCCTGGCCGGTAGCTTCATGTaGAGTCTCCAGAACTCGGGCCGGAAGGCGGCGCAGGCGGTTGGG +
Preference number: 6 (lower is better)
Translates to: SRDPRVKKTLAGSFM*SLQNSGRKAAQAVG
Trigger: CCCAACCGCCTGCGCCGCCTTCCGGCCCGAGTTCTGGAGACTCAACATGAAGCTACCGGCCAGGGTTTTCTTTACTCTGGGGTCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000519328.5
CDS GCA 72 bp TCAGCTCTTCTTCTCACCTTCATATCCCTAGTAAGGTaGCCTCCGAGGAGCGAGGCCACAGGGCAGCCGGGA +
Preference number: 6 (lower is better)
Translates to: SALLLTFISLVR*PPRSEATGQPG
Trigger: TCCCGGCTGCCCTGTGGCCTCGCTCCTCGGAGGGCACCTTACTAGGGATATGAAGGTGAGAAGAAGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519410.5
CDS CAA 72 bp CCCAGAGTAAAGAAAACCCTGGCCGGTAGCTTCATGTaGAGTCTCCAGAACTCGGGCCGGAAGGCGGCGCAG +
Preference number: 6 (lower is better)
Translates to: PRVKKTLAGSFM*SLQNSGRKAAQ
Trigger: CTGCGCCGCCTTCCGGCCCGAGTTCTGGAGACTCAACATGAAGCTACCGGCCAGGGTTTTCTTTACTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517314.5
ENST00000519328.5
CDS GCA 72 bp CAGTTCTCCTTGGTCTTCTTCCTTTTGGGAGCCAGCTaGCTTCAGAGGACAATGTTCTGCCCTCCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: QFSLVFFLLGAS*LQRTMFCPPPE
Trigger: CTCTGGAGGAGGGCAGAACATTGTCCTCTGAAGGCAGCTGGCTCCCAAAAGGAAGAAGACCAAGGAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000520227.1
ENST00000520859.5
ENST00000521668.1
ENST00000522161.5
CDS CCA 72 bp TCTTCCGGCTGGCTATCACGCACTGAGCACCTAGGCTaGACAGAAGAGTTGTCATTCCTTTACCAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SSGWLSRTEHLG*TEELSFLYQGQ
Trigger: CTGGCCTTGGTAAAGGAATGACAACTCTTCTGTCCAGCCTAGGTGCTCAGTGCGTGATAGCCAGCCGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000220764.7
ENST00000517314.5
ENST00000517761.5
ENST00000519007.5
ENST00000519410.5
ENST00000520227.1
ENST00000522161.5
ENST00000522583.1
CDS CAA 72 bp CTATCACGCACTGAGCACCTAGGCTGGACAGAAGAGTaGTCATTCCTTTACCAAGGCCAGTACCTCCCCCAG +
Preference number: 6 (lower is better)
Translates to: LSRTEHLGWTEE*SFLYQGQYLPQ
Trigger: CTGGGGGAGGTACTGGCCTTGGTAAAGGAATGACAACTCTTCTGTCCAGCCTAGGTGCTCAGTGCGTGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000220764.7
ENST00000517314.5
ENST00000517761.5
ENST00000518725.5
ENST00000519007.5
ENST00000519410.5
ENST00000520227.1
ENST00000522161.5
ENST00000522583.1
CDS TCA 72 bp CTCCCCCATGAGCAGGAGATGCTTCTTCCCCAGTCCTaGCATCTCCCTACTGTGAGAAGTTCAGGTAGTACA +
Preference number: 6 (lower is better)
Translates to: LPHEQEMLLPQS*HLPTVRSSGST
Trigger: TGTACTACCTGAACTTCTCACAGTAGGGAGATGTCAGGACTGGGGAAGAAGCATCTCCTGCTCATGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522161.5
CDS GCA 72 bp CTTTTGGGAGCCAGCTGCCTTCAGAGGACAATGTTCTaGCCTCCTCCAGAGTTATGTAAGTCCGCCTACTTC +
Preference number: 6 (lower is better)
Translates to: LLGASCLQRTMF*PPPELCKSAYF
Trigger: GAAGTAGGCGGACTTACATAACTCTGGAGGAGGGCAGAACATTGTCCTCTGAAGGCAGCTGGCTCCCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000520227.1
ENST00000520859.5
ENST00000521668.1
ENST00000522161.5
CDS CCA 72 bp CATTTCGGCTGGCTATCACGCACTGAGCACCTAGGCTaGACAGAAGAGTTGTCATTCCTTTACCAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: HFGWLSRTEHLG*TEELSFLYQGQ
Trigger: CTGGCCTTGGTAAAGGAATGACAACTCTTCTGTCCAGCCTAGGTGCTCAGTGCGTGATAGCCAGCCGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518725.5
CDS CAA 90 bp GACAGGATCGTTGGGTATGAACAGTTCTCCTTGGTCTTCTTCCTTTaGGGAGCCAGCTGCCTTCAGAGGACAATGTTCTGCCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: DRIVGYEQFSLVFFL*GASCLQRTMFCPPP
Trigger: TGGAGGAGGGCAGAACATTGTCCTCTGAAGGCAGCTGGCTCCCAAAAGGAAGAAGACCAAGGAGAACTGTTCATACCCAACGATCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000520227.1
ENST00000520859.5
ENST00000521668.1
ENST00000522161.5
CDS TCA 72 bp TTCAAAACATCCATCTTCCGGCTGGCTATCACGCACTaGGCACCTAGGCTGGACAGAAGAGTTGTCATTCCT +
Preference number: 6 (lower is better)
Translates to: FKTSIFRLAITH*APRLDRRVVIP
Trigger: AGGAATGACAACTCTTCTGTCCAGCCTAGGTGCTCAGTGCGTGATAGCCAGCCGGAAGATGGATGTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220764.7
ENST00000517314.5
ENST00000517761.5
ENST00000519007.5
ENST00000519410.5
ENST00000520227.1
ENST00000522161.5
ENST00000522583.1
CDS TCA 72 bp AGCCTTAGGCCGTCACCAGATGCAGATGCCCAGTCTTaGACTTGTCCAGGCATCAGAATCATGAGTCAAACA +
Preference number: 6 (lower is better)
Translates to: SLRPSPDADAQS*TCPGIRIMSQT
Trigger: TGTTTGACTCATGATTCTGATGCCTGGACAAGTTCAAGACTGGGCATCTGCATCTGGTGACGGCCTAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521668.1
ENST00000522161.5
CDS CCA 72 bp ACCGTCAAATTTAATGACATTCAGCATTGTCAGGATTaGTTCCACAACAGACCTCCCTGCCCCAAACACACT +
Preference number: 6 (lower is better)
Translates to: TVKFNDIQHCQD*FHNRPPCPKHT
Trigger: AGTGTGTTTGGGGCAGGGAGGTCTGTTGTGGAACCAATCCTGACAATGCTGAATGTCATTAAATTTGACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520148.1
CDS CCA 72 bp CCTGCCCCAAACACACTCTTTGGTTTTTATAGGCCCTaGTTGAATCACATTGAATCGCATTCCATATTTACC +
Preference number: 6 (lower is better)
Translates to: PAPNTLFGFYRP*LNHIESHSIFT
Trigger: GGTAAATATGGAATGCGATTCAATGTGATTCAACCAGGGCCTATAAAAACCAAAGAGTGTGTTTGGGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520148.1
CDS TCA 72 bp AGTCAACCTGCTAAGGATGTTTGGATGTTTGTCCCTTaGAAACTCATGTTGAAATGTGATCCCCAATGTTGG +
Preference number: 6 (lower is better)
Translates to: SQPAKDVWMFVP*KLMLKCDPQCW
Trigger: CCAACATTGGGGATCACATTTCAACATGAGTTTTCAAGGGACAAACATCCAAACATCCTTAGCAGGTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520859.5
ENST00000522161.5
CDS CAA 90 bp AGGCACAGAGAGGTTAAATCATTTTCTCTATGTCATATGGCCAATTaGTCAATCTCAAGAGGTCTAGCTTCAGTCTGTACCCTTAGTCAC +
Preference number: 6 (lower is better)
Translates to: RHREVKSFSLCHMAN*SISRGLASVCTLSH
Trigger: GTGACTAAGGGTACAGACTGAAGCTAGACCTCTTGAGATTGACAAATTGGCCATATGACATAGAGAAAATGATTTAACCTCTCTGTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524332.1
CDS CAA 72 bp TTTCCCCAACACAAGCTCCATATGGTTCAAGCTTCCTaGGGTTGCTTCTACTTCTTAGTTTTAAATTCTCTG +
Preference number: 6 (lower is better)
Translates to: FPQHKLHMVQAS*GCFYFLVLNSL
Trigger: CAGAGAATTTAAAACTAAGAAGTAGAAGCAACCCAAGGAAGCTTGAACCATATGGAGCTTGTGTTGGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519007.5
CDS CAA 72 bp GAGGTTAAATCATTTTCTCTATGTCATATGGCCAATTaGTCAATCTCAAGAGGTCTAGCTTCAGTCTGTACC +
Preference number: 6 (lower is better)
Translates to: EVKSFSLCHMAN*SISRGLASVCT
Trigger: GGTACAGACTGAAGCTAGACCTCTTGAGATTGACAAATTGGCCATATGACATAGAGAAAATGATTTAACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524332.1