RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDX60 (Homo sapiens)

Ensembl gene IDs: ENSG00000137628

Ensembl transcript IDs: ENST00000393743.8, ENST00000505393.1, ENST00000511317.2, ENST00000513997.1, ENST00000514995.2, ENST00000679510.1, ENST00000679744.1, ENST00000680771.1, ENST00000680917.1, ENST00000680998.1, ENST00000681832.1

Found 653 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTAAGGCTCTCAGCTGCACCATTCCCTGGACAATTGCCCTAAACTaGCAGAGGCCTCTTGGAGATGCCTGGGTGGTTACGACCTCTCCT +
Preference number: 1 (lower is better)
Translates to: AKALSCTIPWTIALN*QRPLGDAWVVTTSP
Trigger: AGGAGAGGTCGTAACCACCCAGGCATCTCCAAGAGGCCTCTGTCAGTTTAGGGCAATTGTCCAGGGAATGGTGCAGCTGAGAGCCTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR GCA 90 bp CATTCCCTGGACAATTGCCCTAAACTGACAGAGGCCTCTTGGAGATaGCTGGGTGGTTACGACCTCTCCTGGGGATGGGAAATAGCCCAC +
Preference number: 1 (lower is better)
Translates to: HSLDNCPKLTEASWR*LGGYDLSWGWEIAH
Trigger: GTGGGCTATTTCCCATCCCCAGGAGAGGTCGTAACCACCCAGGCATCTCCAAGAGGCCTCTGTCAGTTTAGGGCAATTGTCCAGGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CCA 90 bp CTCCTTAGCTCCACTGGCCCCTTGCTTTATGGGAATGGATGCAGATaGAAGAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTC +
Preference number: 1 (lower is better)
Translates to: LLSSTGPLLYGNGCR*KRPEWDYLKGPLTL
Trigger: GAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTCTTCCATCTGCATCCATTCCCATAAAGCAAGGGGCCAGTGGAGCTAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR GCA 90 bp GCATGTCTCCTTAGCTCCACTGGCCCCTTGCTTTATGGGAATGGATaGAGATGGAAGAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTC +
Preference number: 1 (lower is better)
Translates to: ACLLSSTGPLLYGNG*RWKRPEWDYLKGPL
Trigger: GAGGGGACCCTTTAGATAGTCCCACTCTGGCCTCTTCCATCTGCATCCATTCCCATAAAGCAAGGGGCCAGTGGAGCTAAGGAGACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CCA 90 bp GAGGCCTCTTGGAGATGCCTGGGTGGTTACGACCTCTCCTGGGGATaGGAAATAGCCCACACCCAATGTCTGAGTGACATGAAGTATAAA +
Preference number: 1 (lower is better)
Translates to: EASWRCLGGYDLSWG*EIAHTQCLSDMKYK
Trigger: TTTATACTTCATGTCACTCAGACATTGGGTGTGGGCTATTTCCCATCCCCAGGAGAGGTCGTAACCACCCAGGCATCTCCAAGAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR TCA 90 bp GATGGAACCCTAAGGAGCCCTCTGAAATATCGTGTCCCATGTCTTTaGCATACACTGCTTGTGGCAATTGAGAATACCAGGATCGAGGAG +
Preference number: 1 (lower is better)
Translates to: DGTLRSPLKYRVPCL*HTLLVAIENTRIEE
Trigger: CTCCTCGATCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAAGACATGGGACACGATATTTCAGAGGGCTCCTTAGGGTTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR GCA 90 bp AGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCTGTCAGTaGATGATGCCTGGGGCTGAGACTCTAGTCTGGATGAAACTTCAT +
Preference number: 1 (lower is better)
Translates to: RIEESMKLLNIAACQ*MMPGAETLVWMKLH
Trigger: ATGAAGTTTCATCCAGACTAGAGTCTCAGCCCCAGGCATCATGCACTGACAGGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR CCA 90 bp TGTCCCTTAAGAGCCTTTACAAAGAAATGCAGCCCTGCTGACAACTaGATTGAGCCCAAGAAGACACATTTTGGACTTCTGACCTCCAGA +
Preference number: 1 (lower is better)
Translates to: CPLRAFTKKCSPADN*IEPKKTHFGLLTSR
Trigger: TCTGGAGGTCAGAAGTCCAAAATGTGTCTTCTTGGGCTCAATCCAGTTGTCAGCAGGGCTGCATTTCTTTGTAAAGGCTCTTAAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR TCA 90 bp GAGGGTAGAAATTCTAACTGCAGGAATCAAGGAAAGATTCAGAGATaGGATACCAAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGC +
Preference number: 1 (lower is better)
Translates to: EGRNSNCRNQGKIQR*DTKKGAIRKEGTQG
Trigger: GCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTTGGTATCTCATCTCTGAATCTTTCCTTGATTCCTGCAGTTAGAATTTCTACCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR GCA 90 bp CCCAAGTTTTTGAGACAGCTTCCAAGTCTGTGGAGTTTCTTGGGCTaGTCTGGAGATAATAACTTCAGTAACTATGAGCCACTCAAGGAA +
Preference number: 1 (lower is better)
Translates to: PKFLRQLPSLWSFLG*SGDNNFSNYEPLKE
Trigger: TTCCTTGAGTGGCTCATAGTTACTGAAGTTATTATCTCCAGAGCAGCCCAAGAAACTCCACAGACTTGGAAGCTGTCTCAAAAACTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR TCA 90 bp GAAATATCGTGTCCCATGTCTTTGACATACACTGCTTGTGGCAATTaGGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGC +
Preference number: 1 (lower is better)
Translates to: EISCPMSLTYTACGN*EYQDRGVNEAFEYC
Trigger: GCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAAGACATGGGACACGATATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR GCA 90 bp AAGGCAATAAAAGTAGATTGTCCCTTAAGAGCCTTTACAAAGAAATaGAGCCCTGCTGACAACTGGATTGAGCCCAAGAAGACACATTTT +
Preference number: 1 (lower is better)
Translates to: KAIKVDCPLRAFTKK*SPADNWIEPKKTHF
Trigger: AAAATGTGTCTTCTTGGGCTCAATCCAGTTGTCAGCAGGGCTGCATTTCTTTGTAAAGGCTCTTAAGGGACAATCTACTTTTATTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR TCA 90 bp AGAGGGGATAAACATTTTGGCCCTAGAGTTGACAGAATTAGACATTaGGAGCAAGGAAGAGATGTTATATTAGCTAAGTCTTTCCAGGCA +
Preference number: 1 (lower is better)
Translates to: RGDKHFGPRVDRIRH*EQGRDVILAKSFQA
Trigger: TGCCTGGAAAGACTTAGCTAATATAACATCTCTTCCTTGCTCTCAATGTCTAATTCTGTCAACTCTAGGGCCAAAATGTTTATCCCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR GCA 90 bp GAGACTCTTTCTTTGAATGCAAGTCACATTAGTCATTCCCTTATCTaGCATCATAGCTCTGACCATGTTTGTAAGGTCTATAAGTCAGCT +
Preference number: 1 (lower is better)
Translates to: ETLSLNASHISHSLI*HHSSDHVCKVYKSA
Trigger: AGCTGACTTATAGACCTTACAAACATGGTCAGAGCTATGATGGCAGATAAGGGAATGACTAATGTGACTTGCATTCAAAGAAAGAGTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR CCA 90 bp ACACAAAATTCAAAGTATGTAAGTGAATATAAACTAGAGACCGGATaGAACCCTAAGGAGCCCTCTGAAATATCGTGTCCCATGTCTTTG +
Preference number: 1 (lower is better)
Translates to: TQNSKYVSEYKLETG*NPKEPSEISCPMSL
Trigger: CAAAGACATGGGACACGATATTTCAGAGGGCTCCTTAGGGTTCCATCCGGTCTCTAGTTTATATTCACTTACATACTTTGAATTTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR TCA 90 bp TTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTaGAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTT +
Preference number: 1 (lower is better)
Translates to: LWSHFVLFMLVSSVY*NPQAATSTKRKILL
Trigger: AAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR TCA 90 bp TATTTCAATTCCCTTAATTCAGACCTTCACTCATTTTCACCTGCATaGCTGTTACAGCCTTTGCACCTACATATTTCTGCCACATATATA +
Preference number: 1 (lower is better)
Translates to: YFNSLNSDLHSFSPA*LLQPLHLHISATYI
Trigger: TATATATGTGGCAGAAATATGTAGGTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGAAGGTCTGAATTAAGGGAATTGAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR TCA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGCTGCCTGTCAGTGCATaGTGCCTGGGGCTGAGACTC +
Preference number: 2 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGELPVSA*CLGLRL
Trigger: GAGTCTCAGCCCCAGGCATCATGCACTGACAGGCAG...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR GCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGAGCCTTGGTCTCGTGTaGCTTTTTGCTCTTGGGCCC +
Preference number: 2 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWSLGLV*LFALGP
Trigger: GGGCCCAAGAGCAAAAAGGCACACGAGACCAAGGCT...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTCAGGGGAGAACGCTCTaGCTATGGAAGGGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSQGRTL*LWKGLA
Trigger: GGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTG...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGACCCAGTTTTGGCGATaGGGAGCAAGCAGCAGAATT +
Preference number: 2 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWTQFWR*GASSRI
Trigger: AATTCTGCTGCTTGCTCCTCATCGCCAAAACTGGGT...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCATCAGGACTAAGATTCTaGAGTACCATTCTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: SGENALTMEGPGPKICRASGLRF*STILAC
Trigger: GCAGGCCAGAATGGTACTTCAGAATCTTAGTCCTGA...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCAAAAATCTACCTAGGCTaGCAGGCTGTGGTTCTACCT +
Preference number: 2 (lower is better)
Translates to: SGENALTMEGPGPKICRAKIYLG*QAVVLP
Trigger: AGGTAGAACCACAGCCTGTCAGCCTAGGTAGATTTT...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCACATCATACAGCTGGATaGTTTCTCGAGGTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: SGENALTMEGPGPKICRAHHTAG*FLEVKG
Trigger: CCCTTTCACCTCGAGAAAGCATCCAGCTGTATGATG...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGAAACTAGAGACCGGATaGAACCCTAAGGAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGEKLETG*NPKEPS
Trigger: AGAGGGCTCCTTAGGGTTCCATCCGGTCTCTAGTTT...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR TCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATATGGATCTCAGTTTCCTaGCCAGAGGAGGGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIWISVS*PEEGSL
Trigger: CAGAGAGCCCTCCTCTGGTCAGGAAACTGAGATCCA...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGGACGATACTCCCTGGTaGAAACACCACAGAGAACTT +
Preference number: 2 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWDDTPW*KHHREL
Trigger: AAGTTCTCTGTGGTGTTTTCACCAGGGAGTATCGTC...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGGCCTTTACAAAGAAATaGAGCCCTGCTGACAACTGG +
Preference number: 2 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGEAFTKK*SPADNW
Trigger: CCAGTTGTCAGCAGGGCTGCATTTCTTTGTAAAGGC...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR CAA 90 bp AGTAACACAAAAGACACGCCGAATGTCAGATCCTTCTGGCCAGACTaGTGTAAGCAGAGATACAGTCTTGTGTGCCTTGGCCTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: SNTKDTPNVRSFWPD*CKQRYSLVCLGLPK
Trigger: CTTTGGGAGGCCAAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGACATTCGGCGTGTCTTTTGTGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGTCATTTTCACCTGCATaGCTGTTACAGCCTTTGCAC +
Preference number: 2 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGESFSPA*LLQPLH
Trigger: GTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGA...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR TCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATATTGGGAAAGCCGGCCTaGCGACCCACATGTCTTTTA +
Preference number: 2 (lower is better)
Translates to: EARVGLSKGSPHPHFIFILGKPA*RPTCLL
Trigger: TAAAAGACATGTGGGTCGTCAGGCCGGCTTTCCCAA...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTCAGTCTTGTGTGCCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSQSCVP*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGGCACACAAGACTG...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTGACCTCTCCTGGGGATaGGAAATAGCCCACACCCAA +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSDLSWG*EIAHTQ
Trigger: TTGGGTGTGGGCTATTTCCCATCCCCAGGAGAGGTC...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CAA 90 bp CTTGTGGCAATTGAGAATACCAGGATCGAGGAGTCAATGAAGCTTTaGAATATTGCTGCCTGTCAGTGCATGATGCCTGGGGCTGAGACT +
Preference number: 2 (lower is better)
Translates to: LVAIENTRIEESMKL*NIAACQCMMPGAET
Trigger: AGTCTCAGCCCCAGGCATCATGCACTGACAGGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAATTGCCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR TCA 90 bp GAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCTGTCAGCATGATGCCTGGGGCTaGGACTCTAGTCTGGATGAA +
Preference number: 2 (lower is better)
Translates to: ENTRIEESMKLLNIAACQHDAWG*DSSLDE
Trigger: TTCATCCAGACTAGAGTCTCAGCCCCAGGCATCATG...CTGACAGGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGGCAGGGGAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHGRGIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTCCCCTGCC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR TCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCTCACTCAGGGGTTTATaGGAATGCCAGTGCACAAGT +
Preference number: 2 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGSLRGL*ECQCTS
Trigger: ACTTGTGCACTGGCATTCTCATAAACCCCTGAGTGA...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp GCTCCCCTCAGGCTTATGCACTGTCTACACGTTGCTCAAAAGATGAAGCCCAAAATTCTGCAGAGCCTTTaGGGAGTTGAAATGCATAGC +
Preference number: 2 (lower is better)
Translates to: APLRLMHCLHVAQKMKPKILQSL*GVEMHS
Trigger: GCTATGCATTTCAACTCCCCAAAGGCTCTGCAGAAT...TTTGGGCTTCATCTTTTGAGCAACGTGTAGACAGTGCATAAGCCTGAGGGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CCA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTTCTGGGCACAGTTCCTaGGCCCGAGGCCAACTTTTC +
Preference number: 2 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGSGHSS*ARGQLF
Trigger: GAAAAGTTGGCCTCGGGCCCAGGAACTGTGCCCAGA...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGAGGTTGCAGTGAGCTaGGATCATGCCACCGCACTC +
Preference number: 2 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHEVAVS*DHATAL
Trigger: GAGTGCGGTGGCATGATCTCAGCTCACTGCAACCTC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR TCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCAGCTGTCTTTGATTGGTaGTGGTTTCTTTTCAAGAAA +
Preference number: 2 (lower is better)
Translates to: SGENALTMEGPGPKICRAAVFDW*WFLFKK
Trigger: TTTCTTGAAAAGAAACCATCACCAATCAAAGACAGC...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCCCCACCATTTCAACCTaGAGTTTCACACAGCTACTT +
Preference number: 2 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGPTIST*SFTQLL
Trigger: AAGTAGCTGTGTGAAACTTCAGGTTGAAATGGTGGG...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGTCACTCATTTTCACCTaGATGACTGTTACAGCCTTT +
Preference number: 2 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGESLIFT*MTVTAF
Trigger: AAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGA...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTGGCACTCAAGGCAGATaGGTCAGTTCATGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSGTQGR*VSSWKG
Trigger: TCCTTTCCATGAACTGACCCATCTGCCTTGAGTGCC...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CAA 90 bp TCCTTGCCCAAGTTTTTGAGACAGCTTCCAAGTCTGTGGAGTTTCTaGGGCTGCTCTGGAGATAATAACTTCAGTAACTATGAGCCACTC +
Preference number: 2 (lower is better)
Translates to: SLPKFLRQLPSLWSF*GCSGDNNFSNYEPL
Trigger: GAGTGGCTCATAGTTACTGAAGTTATTATCTCCAGAGCAGCCCAAGAAACTCCACAGACTTGGAAGCTGTCTCAAAAACTTGGGCAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR CAA 90 bp CCATCTCTGTCAAATGCCCATAATCTCCATGTTGACATAGTGAGCTaGGAGTCTATCCCTGACACATCAGGCCCTTTCTCATTTCTGTAC +
Preference number: 2 (lower is better)
Translates to: PSLSNAHNLHVDIVS*ESIPDTSGPFSFLY
Trigger: GTACAGAAATGAGAAAGGGCCTGATGTGTCAGGGATAGACTCCAAGCTCACTATGTCAACATGGAGATTATGGGCATTTGACAGAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR CAA 90 bp CCTCTCTCCATAGAGCACAAGTCTAACTTTATACGATTGTTTTACTaGCAAGTAGTCTTTGGGAAAGCCGGCCTGACGACCCACATGTCT +
Preference number: 2 (lower is better)
Translates to: PLSIEHKSNFIRLFY*QVVFGKAGLTTHMS
Trigger: AGACATGTGGGTCGTCAGGCCGGCTTTCCCAAAGACTACTTGCAAGTAAAACAATCGTATAAAGTTAGACTTGTGCTCTATGGAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGGAATGTGTGAATGATTaGTTGATTGATTTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGEECVND*LIDFLA
Trigger: GGCAAGGAAATCAATCAATCAATCATTCACACATTC...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR TCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGATCAACCACAAAAGATaGCGTTGGAATAAAACCCAA +
Preference number: 2 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWINHKR*RWNKTQ
Trigger: TTGGGTTTTATTCCAACGTCATCTTTTGTGGTTGAT...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTACAATTGCCCTAAACTaGCAGAGGCCTCTTGGAGAT +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSTIALN*QRPLGD
Trigger: ATCTCCAAGAGGCCTCTGTCAGTTTAGGGCAATTGT...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCAGGTAGAAATTCTAACTaGAGGAATCAAGGAAAGATT +
Preference number: 2 (lower is better)
Translates to: SGENALTMEGPGPKICRAGRNSN*RNQGKI
Trigger: AATCTTTCCTTGATTCCTGCAGTTAGAATTTCTACC...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCAGAATGAGCTCCGGGTaGGCATGTCTCCTTAGCTCC +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFRMSSG*ACLLSS
Trigger: GGAGCTAAGGAGACATGCCCACCCGGAGCTCATTCT...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCGGTGGGGCAATTCTCTaGTGTCCTGGCATTCCCAGT +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFGGAIL*CPGIPS
Trigger: ACTGGGAATGCCAGGACACCAGAGAATTGCCCCACC...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCTGGGAGGCGGAGGTTaGAGTGAGCTGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLGGGG*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAACCTCCGCCTCCCAG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR GCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCAAATCTTCCATCTCCTaGAGGGTTAAGCAATTACTG +
Preference number: 2 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGKSSIS*RVKQLL
Trigger: CAGTAATTGCTTAACCCTGCAGGAGATGGAAGATTT...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTACCGAGCTGGCCCAATaGCAACTGAATATTTATTCC +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSTELAQ*QLNIYS
Trigger: GGAATAAATATTCAGTTGGCATTGGGCCAGCTCGGT...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCTTCTGGACTCAAATCTaGTTCAGGACTAAGATTCTG +
Preference number: 2 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGFWTQI*FRTKIL
Trigger: CAGAATCTTAGTCCTGAAGCAGATTTGAGTCCAGAA...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATACATCAAACTGACACCTaGACCTGTCATAATCATCAC +
Preference number: 2 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIHQTDT*TCHNHH
Trigger: GTGATGATTATGACAGGTCCAGGTGTCAGTTTGATG...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCTCATTTTCTGCATCCTaGGCTGGATGTAAAGAACTT +
Preference number: 2 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGSFSAS*AGCKEL
Trigger: AAGTTCTTTACATCCAGCCCAGGATGCAGAAAATGA...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCAGATGGGTCAGTTCATaGAAAGGAAGAGGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGRWVSS*KGRGRK
Trigger: TTTTCTACCTCTTCCTTTCCATGAACTGACCCATCT...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCTGGAAGAGGCCAGAGTaGGACTATCTAAAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFWKRPE*DYLKGP
Trigger: GGGACCCTTTAGATAGTCCCACTCTGGCCTCTTCCA...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp CCTTCACTCATTTTCACCTGCATGACTGTTACAGCCTTTGCACCTACATATTTCAATAGGAGGCCAATATaGAAGATCAGAGTCAGACGG +
Preference number: 2 (lower is better)
Translates to: PSLIFTCMTVTAFAPTYFNRRPI*KIRVRR
Trigger: CCGTCTGACTCTGATCTTTCATATTGGCCTCCTATT...GAAATATGTAGGTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR TCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGTGTCCAGTGTATACTaGAACCCACAGGCAGCTACA +
Preference number: 2 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDVSSVY*NPQAAT
Trigger: TGTAGCTGCCTGTGGGTTTCAGTATACACTGGACAC...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCCTTTCCTGGTTGGCTaGCAGAGATCATGGAAGAGT +
Preference number: 2 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHPFLVG*QRSWKS
Trigger: ACTCTTCCATGATCTCTGTCAGCCAACCAGGAAAGG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR TCA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTCTAGCACAAGCTCTTTaGGAAAGAGGCAGATGGAGT +
Preference number: 2 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGLAQAL*ERGRWS
Trigger: ACTCCATCTGCCTCTTTCTCAAAGAGCTTGTGCTAG...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTCAACCTCAAAGTCTCTaGCCAACTTTGATACGGTAT +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSQPQSL*PTLIRY
Trigger: ATACCGTATCAAAGTTGGTCAGAGACTTTGAGGTTG...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTACAGTTGCTGCCACTTaGTTAACAAGGGCCTTTGTG +
Preference number: 2 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGTVAAT*LTRAFV
Trigger: CACAAAGGCCCTTGTTAATCAAGTGGCAGCAACTGT...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCAGGGACATCGGATCATaGCAAGGAGATGTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFRDIGS*QGDVPR
Trigger: TCTGGGAACATCTCCTTGTCATGATCCGATGTCCCT...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCGCTAAGGCTCTCAGCTaGACCATTCCCTGGACAATT +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFAKALS*TIPWTI
Trigger: AATTGTCCAGGGAATGGTGCAGCTGAGAGCCTTAGC...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp ATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTAAGAATGGGGTACCCACAGACATACACTGCTTGTaGCAATTGAGAATACCAGGA +
Preference number: 2 (lower is better)
Translates to: MQLSNSRWSMKPKNGVPTDIHCL*QLRIPG
Trigger: TCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTC...TGTGGGTACCCCATTCTTAGGCTTCATTGACCATCTACTGTTGCTTAGTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CCA 90 bp ACCTTGTTTCCACTAGAGTTCCAGTTATTTTCGAGTGTCATCACTGACCTACCAGAGTCAGACGGAGCCTaGAGAAAACATCAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: TLFPLEFQLFSSVITDLPESDGA*RKHQRK
Trigger: TTTTCTCTGATGTTTTCTCCAGGCTCCGTCTGACTC...TGGTAGGTCAGTGATGACACTCGAAAATAACTGGAACTCTAGTGGAAACAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CCA 90 bp CCTTCACTCATTTTCACCTGCATGACTGTTACAGCCTTTGCACCTACATATTTCAAGGCTTTAGAAAGATaGACATTTAGGCCAGGAGCG +
Preference number: 2 (lower is better)
Translates to: PSLIFTCMTVTAFAPTYFKALER*TFRPGA
Trigger: CGCTCCTGGCCTAAATGTCCATCTTTCTAAAGCCTT...GAAATATGTAGGTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATAGCCCTGCTGACAACTaGATTGAGCCCAAGAAGACA +
Preference number: 2 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDSPADN*IEPKKT
Trigger: TGTCTTCTTGGGCTCAATCCAGTTGTCAGCAGGGCT...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAGAGAACTTCACCACTTaGCAGATTTTTCGTAAAACG +
Preference number: 2 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIENFTT*QIFRKT
Trigger: CGTTTTACGAAAAATCTGCCAAGTGGTGAAGTTCTC...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTGTAGAAAAACCACAGTaGGACAATGCAGTTTACACA +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSVEKPQ*DNAVYT
Trigger: TGTGTAAACTGCATTGTCTCACTGTGGTTTTTCTAC...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCGCTTTTGAATATTGCTaGCTGTCAGTGCATGATGCC +
Preference number: 2 (lower is better)
Translates to: SFCVIYASVQCILKPTGSAFEYC*LSVHDA
Trigger: GGCATCATGCACTGACAGGCAGCAATATTCAAAAGC...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR GCA 90 bp ACCTTGTTTCCACTAGAGTTCCAGTTATTTTCGAGTGTCATCACTGACCTACCAAGTCATTCCCTTATCTaGCATCATAGCTCTGACCAT +
Preference number: 2 (lower is better)
Translates to: TLFPLEFQLFSSVITDLPSHSLI*HHSSDH
Trigger: ATGGTCAGAGCTATGATGGCAGATAAGGGAATGACT...TGGTAGGTCAGTGATGACACTCGAAAATAACTGGAACTCTAGTGGAAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR GCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTGGCCTTTTTGTCTCCTaGTTTTTCTTTAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSGLFVS*FFFRKV
Trigger: CACTTTCCTAAAGAAAAAGCAGGAGACAAAAAGGCC...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCATGTCCTCAGCCCAATaGGAAGTGATGACTCTAGCA +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFMSSAQ*EVMTLA
Trigger: TGCTAGAGTCATCACTTCCCATTGGGCTGAGGACAT...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCTCTGAAGTACCATTCTaGCCTGCTCTACGTTGCCAT +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFSEVPF*PALRCH
Trigger: ATGGCAACGTAGAGCAGGCCAGAATGGTACTTCAGA...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTTTGTTAGCCATGACATaGGCTTCTTTATCAGCTTTG +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSLLAMT*ASLSAL
Trigger: CAAAGCTGATAAAGAAGCCCATGTCATGGCTAACAA...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCTGGCCCCTTGCTTTATaGGAATGGATGCAGATGGAA +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFWPLAL*EWMQME
Trigger: TTCCATCTGCATCCATTCCCATAAAGCAAGGGGCCA...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCATTTGTGAGTATTCATaGCAGAACATGGCAGGTTTG +
Preference number: 2 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTICEYS*QNMAGL
Trigger: CAAACCTGCCATGTTCTGTCATGAATACTCACAAAT...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR-3UTR TCA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTGTCTCTGACCAACTTTaGTACGGTATTCCAGAGATA +
Preference number: 2 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTVSDQL*YGIPEI
Trigger: TATCTCTGGAATACCGTATCAAAGTTGGTCAGAGAC...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCCAGTTTAAGGCATCATaGCGATACTCCCTGGTGAAA +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFQFKAS*RYSLVK
Trigger: TTTCACCAGGGAGTATCGTCATGATGCCTTAAACTG...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTATTGTAGCCACTCGGTaGGATGTTCAGGATTACTTA +
Preference number: 2 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGIVATR*DVQDYL
Trigger: TAAGTAATCCTGAACATCTCACCGAGTGGCTACAAT...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp GCAATTGAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCTTTGGGGAGTTGAAATaGATAGCACAGAAGAAGCTT +
Preference number: 2 (lower is better)
Translates to: AIENTRIEESMKLLNIAAFGELK*IAQKKL
Trigger: AAGCTTCTTCTGTGCTATGCATTTCAACTCCCCAAA...GGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR GCA 90 bp CCTTCACTCATTTTCACCTGCATGACTGTTACAGCCTTTGCACCTACATATTTCGAAGCTTTTGAATATTaGTGCCTGTCAGTGCATGAT +
Preference number: 2 (lower is better)
Translates to: PSLIFTCMTVTAFAPTYFEAFEY*CLSVHD
Trigger: ATCATGCACTGACAGGCAGCAATATTCAAAAGCTTC...GAAATATGTAGGTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR GCA 90 bp GTCTTTATGTTCATTCTGCATTCCTGCCACAAAAGTCTAGACATCTTAAGAAGACAACAGCATGACCTTTaGAGAAGTCATCTGGGGTCA +
Preference number: 2 (lower is better)
Translates to: VFMFILHSCHKSLDILRRQQHDL*RSHLGS
Trigger: TGACCCCAGATGACTTCTGCAAAGGTCATGCTGTTG...TCTTCTTAAGATGTCTAGACTTTTGTGGCAGGAATGCAGAATGAACATAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513997.1
3UTR-3UTR GCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCCCCCTCAATGTAACATaGACCCAAGTCACTTATCAC +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFPLNVT*TQVTYH
Trigger: GTGATAAGTGACTTGGGTGCATGTTACATTGAGGGG...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCGCTGAGACTCTAGTCTaGATGAAACTTCATCTCAAC +
Preference number: 2 (lower is better)
Translates to: SFCVIYASVQCILKPTGSAETLV*MKLHLN
Trigger: GTTGAGATGAAGTTTCATCCAGACTAGAGTCTCAGC...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGTTTTGAGCCTTTCCTaGTTGGCTGACAGAGATCAT +
Preference number: 2 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHVLSLS*LADRDH
Trigger: ATGATCTCTGTCAGCCAACCAGGAAAGGCTCAAAAC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR TCA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTCATTGGAGCTGTCTTTaGTTGGTGATGGTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTHWSCL*LVMVSF
Trigger: AAAAGAAACCATCACCAATCAAAGACAGCTCCAATG...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTCAGCAAATTCTAGTTTaGTCTAGAATTTGGAAAACC +
Preference number: 2 (lower is better)
Translates to: NSSHSPSLLVVDATAALSQQILV*SRIWKT
Trigger: GGTTTTCCAAATTCTAGAGCAAACTAGAATTTGCTG...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CCA 90 bp ACTGACCTACCACAAAAATTGATCAGTTCTGTCTCTACAACACCAAATTTCCTTAAGTTTGGTGTTGCTTaGGACCCCACTAGGTTTTGT +
Preference number: 2 (lower is better)
Translates to: TDLPQKLISSVSTTPNFLKFGVA*DPTRFC
Trigger: ACAAAACCTAGTGGGGTCCCAAGCAACACCAAACTT...AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGTGCCTAGAGTAACATaGTTTGGAGTTTCTAGTCGA +
Preference number: 2 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHVPRVT*FGVSSR
Trigger: TCGACTAGAAACTCCAAACCATGTTACTCTAGGCAC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR CAA 90 bp GAGTTCCAGTTATTTTCGAGTGTCATCACTGACCTACCACAAAAATaGATCAGTTCTGTCTCTACAACACCAAATTTCCTTCTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: EFQLFSSVITDLPQK*ISSVSTTPNFLLSY
Trigger: GTAACTCAGAAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGTGATGACACTCGAAAATAACTGGAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR CAA 90 bp GCAAATTTATCAACCACAAAAGATGACGTTGGAATAAAACCCAAATaGGGCACCATTTCATTGGAGCTGTCTTTGATTGGTGATGGTTTC +
Preference number: 2 (lower is better)
Translates to: ANLSTTKDDVGIKPK*GTISLELSLIGDGF
Trigger: GAAACCATCACCAATCAAAGACAGCTCCAATGAAATGGTGCCCAATTTGGGTTTTATTCCAACGTCATCTTTTGTGGTTGATAAATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTAACCGTTGGAAAACATaGTACTTTTGCACAGATCTA +
Preference number: 2 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGNRWKT*YFCTDL
Trigger: TAGATCTGTGCAAAAGTATCATGTTTTCCAACGGTT...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR TCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCGACAGAATTAGACATTaGGAGCAAGGAAGAGATGTT +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFDRIRH*EQGRDV
Trigger: AACATCTCTTCCTTGCTCTCAATGTCTAATTCTGTC...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTCCATGACTCTGGGTTaGTTGAAGGACAGCAATGAA +
Preference number: 2 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSMTLG*LKDSNE
Trigger: TTCATTGCTGTCCTTCAAGCAACCCAGAGTCATGGA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATATAAAACTCGAAGTGTaGATCTTGGAACTTTGGTGG +
Preference number: 2 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHIKLEV*ILELWW
Trigger: CCACCAAAGTTCCAAGATGCACACTTCGAGTTTTAT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR TCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATACACCTATAAAGTATTaGGTTGCATGCAGATTGAAG +
Preference number: 2 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDTPIKY*VACRLK
Trigger: CTTCAATCTGCATGCAACTCAATACTTTATAGGTGT...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR TCA 90 bp ACTGACCTACCACAAAAATTGATCAGTTCTGTCTCTACAACACCAAATTTCCTTCTGAACATTTCCTCCTaGTTGATATCTCCCAGATAT +
Preference number: 2 (lower is better)
Translates to: TDLPQKLISSVSTTPNFLLNISS*LISPRY
Trigger: ATATCTGGGAGATATCAATCAGGAGGAAATGTTCAG...AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTGAGAAAAATGTTTTaGGCCTTTCCTGGTTGGCTG +
Preference number: 2 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLRKMF*AFPGWL
Trigger: CAGCCAACCAGGAAAGGCTCAAAACATTTTTCTCAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATATCAAGGAACACCTTTaGTTGATAAAACTCGAAGTG +
Preference number: 2 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHIKEHL*LIKLEV
Trigger: CACTTCGAGTTTTATCAATCAAAGGTGTTCCTTGAT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR TCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCTGGCCCAATGCCAACTaGATATTTATTCCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFWPNAN*IFIPFL
Trigger: AAGAAAAGGAATAAATATTCAGTTGGCATTGGGCCA...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR GCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCAGTCTTTGACATACACTaGTTGTGGCAATTGAGAATA +
Preference number: 2 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAVFDIH*LWQLRI
Trigger: TATTCTCAATTGCCACAAGCAGTGTATGTCAAAGAC...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR GCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGGAATTATGGCTGCAGTaGGAATTAAAGTTGCGAATC +
Preference number: 2 (lower is better)
Translates to: FLYISLVESFCVIYASVQELWLQ*ELKLRI
Trigger: GATTCGCAACTTTAATTCGCACTGCAGCCATAATTC...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR-3UTR GCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATTTCTCCCTTCAAAAGTaGAACGCAAATTCCTTTTCT +
Preference number: 2 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDFSLQK*NANSFS
Trigger: AGAAAAGGAATTTGCGTTGCACTTTTGAAGGGAGAA...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR-3UTR CCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATATAGGTCAGGTTACATaGCAAAGGGGAATGAATTAT +
Preference number: 2 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDIGQVT*QRGMNY
Trigger: ATAATTCATTCCCCTTTGCCATGTAACCTGACCTAT...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR-3UTR CCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTCGAAGTGTGCATCTTaGAACTTTGGTGGAAAATAT +
Preference number: 2 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHSKCAS*NFGGKY
Trigger: ATATTTTCCACCAAAGTTCCAAGATGCACACTTCGA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACATTTGTGAGTATTCATaGCAGAACATGGCAGGTTTG +
Preference number: 2 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNICEYS*QNMAGL
Trigger: CAAACCTGCCATGTTCTGTCATGAATACTCACAAAT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR TCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACATTTGTGAGTATTCATaGCAGAACATGGCAGGTTTG +
Preference number: 2 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYICEYS*QNMAGL
Trigger: CAAACCTGCCATGTTCTGTCATGAATACTCACAAAT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR-3UTR TCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGACATTTCCTCCTGATTaGTATCTCCCAGATATAATG +
Preference number: 2 (lower is better)
Translates to: FLYISLVESFCVIYASVQTFPPD*YLPDIM
Trigger: CATTATATCTGGGAGATATCAATCAGGAGGAAATGT...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACATGATAATGCAAATGTaGTACAAGTCCAGCAAACCC +
Preference number: 2 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNMIMQM*YKSSKP
Trigger: GGGTTTGCTGGACTTGTATCACATTTGCATTATCAT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR CCA 72 bp TCCCTGGACAATTGCCCTAAACTGACAGAGGCCTCTTaGAGATGCCTGGGTGGTTACGACCTCTCCTGGGGA +
Preference number: 3 (lower is better)
Translates to: SLDNCPKLTEAS*RCLGGYDLSWG
Trigger: TCCCCAGGAGAGGTCGTAACCACCCAGGCATCTCCAAGAGGCCTCTGTCAGTTTAGGGCAATTGTCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR GCA 72 bp GACAATTGCCCTAAACTGACAGAGGCCTCTTGGAGATaGCTGGGTGGTTACGACCTCTCCTGGGGATGGGAA +
Preference number: 3 (lower is better)
Translates to: DNCPKLTEASWR*LGGYDLSWGWE
Trigger: TTCCCATCCCCAGGAGAGGTCGTAACCACCCAGGCATCTCCAAGAGGCCTCTGTCAGTTTAGGGCAATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CCA 72 bp TGGAGATGCCTGGGTGGTTACGACCTCTCCTGGGGATaGGAAATAGCCCACACCCAATGTCTGAGTGACATG +
Preference number: 3 (lower is better)
Translates to: WRCLGGYDLSWG*EIAHTQCLSDM
Trigger: CATGTCACTCAGACATTGGGTGTGGGCTATTTCCCATCCCCAGGAGAGGTCGTAACCACCCAGGCATCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CCA 72 bp TCCACTGGCCCCTTGCTTTATGGGAATGGATGCAGATaGAAGAGGCCAGAGTGGGACTATCTAAAGGGTCCC +
Preference number: 3 (lower is better)
Translates to: STGPLLYGNGCR*KRPEWDYLKGP
Trigger: GGGACCCTTTAGATAGTCCCACTCTGGCCTCTTCCATCTGCATCCATTCCCATAAAGCAAGGGGCCAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CCA 72 bp ATAACCTGGAATTCAAGGGTGAGAATGAGCTCCGGGTaGGCATGTCTCCTTAGCTCCACTGGCCCCTTGCTT +
Preference number: 3 (lower is better)
Translates to: ITWNSRVRMSSG*ACLLSSTGPLL
Trigger: AAGCAAGGGGCCAGTGGAGCTAAGGAGACATGCCCACCCGGAGCTCATTCTCACCCTTGAATTCCAGGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CCA 72 bp AAATCAGCCCCCTTGACTCAAGGTGGGGCAATTCTCTaGTGTCCTGGCATTCCCAGTAGGGTTAGAATCAGG +
Preference number: 3 (lower is better)
Translates to: KSAPLTQGGAIL*CPGIPSRVRIR
Trigger: CCTGATTCTAACCCTACTGGGAATGCCAGGACACCAGAGAATTGCCCCACCTTGAGTCAAGGGGGCTGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp GGAGATGAAAGGGAGCCACAAGCCAAGGAATGCCGGCAGCCTCTAAAAGTTGGAGTTGACATAGTGAGCTaGGAGTCTATCCCTGACACA +
Preference number: 3 (lower is better)
Translates to: GDEREPQAKECRQPLKVGVDIVS*ESIPDT
Trigger: TGTGTCAGGGATAGACTCCAAGCTCACTATGTCAAC...TCCAACTTTTAGAGGCTGCCGGCATTCCTTGGCTTGTGGCTCCCTTTCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCAGCAGAGATACAGTCTaGTGTGCCTTGGCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFSRDTV*CALASQ
Trigger: TTGGGAGGCCAAGGCACACAAGACTGTATCTCTGCT...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CCA 72 bp CTTTATGGGAATGGATGCAGATGGAAGAGGCCAGAGTaGGACTATCTAAAGGGTCCCCTCACCCTCACTTTA +
Preference number: 3 (lower is better)
Translates to: LYGNGCRWKRPE*DYLKGPLTLTL
Trigger: TAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTCTTCCATCTGCATCCATTCCCATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR GCA 72 bp GAGTCAATGAAGCTTTTGAATATTGCTGCCTGTCAGTaGATGATGCCTGGGGCTGAGACTCTAGTCTGGATG +
Preference number: 3 (lower is better)
Translates to: ESMKLLNIAACQ*MMPGAETLVWM
Trigger: CATCCAGACTAGAGTCTCAGCCCCAGGCATCATGCACTGACAGGCAGCAATATTCAAAAGCTTCATTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR GCA 72 bp GGCTTTGGAGATGAAAGGGAGCCACAAGCCAAGGAATaGCGGCAGCCTCTAAAAGTTGGAAAAGGCAATAAA +
Preference number: 3 (lower is better)
Translates to: GFGDEREPQAKE*RQPLKVGKGNK
Trigger: TTTATTGCCTTTTCCAACTTTTAGAGGCTGCCGGCATTCCTTGGCTTGTGGCTCCCTTTCATCTCCAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp GGAGATGAAAGGGAGCCACAAGCCAAGGAATGCCGGCAGCCTCTAAAAGTTGGATTTGACATACACTGCTaGTGGCAATTGAGAATACCA +
Preference number: 3 (lower is better)
Translates to: GDEREPQAKECRQPLKVGFDIHC*WQLRIP
Trigger: TGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAA...TCCAACTTTTAGAGGCTGCCGGCATTCCTTGGCTTGTGGCTCCCTTTCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAGGCAGGGGAATTGCTaGAACCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHRQGNC*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGCAATTCCCCTGCCT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR CAA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTACAGTCTTGTGTGCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGTVLCA*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGCACACAAGACTGT...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCTCCTTCTGGCCAGACTaGTGTAAGCAGAGATACAGT +
Preference number: 3 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGSFWPD*CKQRYS
Trigger: ACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGA...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCGCTTCTTTATCAGCTTaGGGAGGCCTTTTTGTCTCC +
Preference number: 3 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGASLSA*GGLFVS
Trigger: GGAGACAAAAAGGCCTCCCAAAGCTGATAAAGAAGC...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGTGTGTGCAAGATCATTaGTTGACTGGATTGGAGAGT +
Preference number: 3 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWCVQDH*LTGLES
Trigger: ACTCTCCAATCCAGTCAACAAATGATCTTGCACACA...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGTCATTGGAGCTGTCTTaGATTGGTGATGGTTTCTTT +
Preference number: 3 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWSLELS*IGDGFF
Trigger: AAAGAAACCATCACCAATCAAAGACAGCTCCAATGA...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTGTCTCGTGTGCCTTTTaGCTCTTGGGCCCACTAAAA +
Preference number: 3 (lower is better)
Translates to: NSSHSPSLLVVDATAALSVSCAF*LLGPLK
Trigger: TTTTAGTGGGCCCAAGAGCAAAAAGGCACACGAGAC...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp ATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTAAGAATGGGGTACCCACAAGAGCCTTTGGGGAGTaGAAATGCATAGCACAGAAG +
Preference number: 3 (lower is better)
Translates to: MQLSNSRWSMKPKNGVPTRAFGE*KCIAQK
Trigger: CTTCTGTGCTATGCATTTCAACTCCCCAAAGGCTCT...TGTGGGTACCCCATTCTTAGGCTTCATTGACCATCTACTGTTGCTTAGTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTTGTGCCTTTTTGCTCTaGGGCCCACTAAAATCCTTC +
Preference number: 3 (lower is better)
Translates to: NSSHSPSLLVVDATAALSCAFLL*GPLKSF
Trigger: GAAGGATTTTAGTGGGCCCAAGAGCAAAAAGGCACA...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAGAGGGGATAAACATTTaGGCCCTAGAGTTGACAGAA +
Preference number: 3 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIEGINI*ALELTE
Trigger: TTCTGTCAACTCTAGGGCCAAAATGTTTATCCCCTC...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR TCA 72 bp CTAAGGAGCCCTCTGAAATATCGTGTCCCATGTCTTTaGCATACACTGCTTGTGGCAATTGAGAATACCAGG +
Preference number: 3 (lower is better)
Translates to: LRSPLKYRVPCL*HTLLVAIENTR
Trigger: CCTGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAAGACATGGGACACGATATTTCAGAGGGCTCCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR TCA 72 bp AAGCAATTACTGTTCACCTGTTGGATCTCAGTTTCCTaGCCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGA +
Preference number: 3 (lower is better)
Translates to: KQLLFTCWISVS*PEEGSLFPKKR
Trigger: TCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTGAGATCCAACAGGTGAACAGTAATTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CCA 72 bp TCCTTGCCCAAGTTTTTGAGACAGCTTCCAAGTCTGTaGAGTTTCTTGGGCTGCTCTGGAGATAATAACTTC +
Preference number: 3 (lower is better)
Translates to: SLPKFLRQLPSL*SFLGCSGDNNF
Trigger: GAAGTTATTATCTCCAGAGCAGCCCAAGAAACTCCACAGACTTGGAAGCTGTCTCAAAAACTTGGGCAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR CCA 72 bp AGAGCCTTTACAAAGAAATGCAGCCCTGCTGACAACTaGATTGAGCCCAAGAAGACACATTTTGGACTTCTG +
Preference number: 3 (lower is better)
Translates to: RAFTKKCSPADN*IEPKKTHFGLL
Trigger: CAGAAGTCCAAAATGTGTCTTCTTGGGCTCAATCCAGTTGTCAGCAGGGCTGCATTTCTTTGTAAAGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR CCA 72 bp AGTAACACAAAAGACACGCCGAATGTCAGATCCTTCTaGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTG +
Preference number: 3 (lower is better)
Translates to: SNTKDTPNVRSF*PDLCKQRYSLV
Trigger: CACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGACATTCGGCGTGTCTTTTGTGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp ACCTTGTTTCCACTAGAGTTCCAGTTATTTTCGAGTGTCATCACTGACCTACCATCCTTGCCCAAGTTTTaGAGACAGCTTCCAAGTCTG +
Preference number: 3 (lower is better)
Translates to: TLFPLEFQLFSSVITDLPSLPKF*RQLPSL
Trigger: CAGACTTGGAAGCTGTCTCAAAAACTTGGGCAAGGA...TGGTAGGTCAGTGATGACACTCGAAAATAACTGGAACTCTAGTGGAAACAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTGCAATTATTTCAGCCTaGGTCTCGTGTGCCTTTTTG +
Preference number: 3 (lower is better)
Translates to: NSSHSPSLLVVDATAALSAIISA*VSCAFL
Trigger: CAAAAAGGCACACGAGACCAAGGCTGAAATAATTGC...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTAACAGTTGCTGCCACTaGATTAACAAGGGCCTTTGT +
Preference number: 3 (lower is better)
Translates to: NSSHSPSLLVVDATAALSNSCCH*INKGLC
Trigger: ACAAAGGCCCTTGTTAATCAAGTGGCAGCAACTGTT...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR GCA 72 bp TTGAGACAGCTTCCAAGTCTGTGGAGTTTCTTGGGCTaGTCTGGAGATAATAACTTCAGTAACTATGAGCCA +
Preference number: 3 (lower is better)
Translates to: LRQLPSLWSFLG*SGDNNFSNYEP
Trigger: TGGCTCATAGTTACTGAAGTTATTATCTCCAGAGCAGCCCAAGAAACTCCACAGACTTGGAAGCTGTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp ACTGACCTACCACAAAAATTGATCAGTTCTGTCTCTACAACACCAAATTTCCTTCAGCTACTCAGGAGATaGAGGCAGGAGAACTGCTTG +
Preference number: 3 (lower is better)
Translates to: TDLPQKLISSVSTTPNFLQLLRR*RQENCL
Trigger: CAAGCAGTTCTCCTGCCTCAATCTCCTGAGTAGCTG...AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGAGGCAGGAGAATTGCTaGAACCTGGGAGGTGAGGTT +
Preference number: 3 (lower is better)
Translates to: FLYISLVESFCVIYASVQRQENC*NLGGEV
Trigger: AACCTCACCTCCCAGGTTCAAGCAATTCTCCTGCCT...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTTCTAGCACAAGCTCTTaGAGAAAGAGGCAGATGGAG +
Preference number: 3 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGSSTSS*RKRQME
Trigger: CTCCATCTGCCTCTTTCTCAAAGAGCTTGTGCTAGA...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTGGAATAAAACCCAAATaGGGCACCATTTCATTGGAG +
Preference number: 3 (lower is better)
Translates to: NSSHSPSLLVVDATAALSGIKPK*GTISLE
Trigger: CTCCAATGAAATGGTGCCCAATTTGGGTTTTATTCC...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR TCA 72 bp TTTTCTGGACTCAAATCTGCTTCAGGACTAAGATTCTaGAGTACCATTCTGGCCTGCTCTACGTTGCCATTT +
Preference number: 3 (lower is better)
Translates to: FSGLKSASGLRF*STILACSTLPF
Trigger: AAATGGCAACGTAGAGCAGGCCAGAATGGTACTTCAGAATCTTAGTCCTGAAGCAGATTTGAGTCCAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR TCA 72 bp AGGATGATTATGTCAGGTTATAAAATCTACCTAGGCTaGCAGGCTGTGGTTCTACCTCTCCCAAGTCCTAAA +
Preference number: 3 (lower is better)
Translates to: RMIMSGYKIYLG*QAVVLPLPSPK
Trigger: TTTAGGACTTGGGAGAGGTAGAACCACAGCCTGTCAGCCTAGGTAGATTTTATAACCTGACATAATCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR TCA 72 bp AATTCTAACTGCAGGAATCAAGGAAAGATTCAGAGATaGGATACCAAAAAGGGAGCAATCAGGAAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: NSNCRNQGKIQR*DTKKGAIRKEG
Trigger: GCCCTCCTTCCTGATTGCTCCCTTTTTGGTATCTCATCTCTGAATCTTTCCTTGATTCCTGCAGTTAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CCA 72 bp TCAAAGTATGTAAGTGAATATAAACTAGAGACCGGATaGAACCCTAAGGAGCCCTCTGAAATATCGTGTCCC +
Preference number: 3 (lower is better)
Translates to: SKYVSEYKLETG*NPKEPSEISCP
Trigger: GGGACACGATATTTCAGAGGGCTCCTTAGGGTTCCATCCGGTCTCTAGTTTATATTCACTTACATACTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTTTGGGCACCATTTCATaGGAGCTGTCTTTGATTGGT +
Preference number: 3 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGLGTIS*ELSLIG
Trigger: ACCAATCAAAGACAGCTCCAATGAAATGGTGCCCAA...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTTTTCAATATGATCTGTaGTTAGTGCAGCACATGGGT +
Preference number: 3 (lower is better)
Translates to: NSSHSPSLLVVDATAALSFQYDL*LVQHMG
Trigger: ACCCATGTGCTGCACTAACAACAGATCATATTGAAA...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR TCA 72 bp CTTTCTTGCTTCGTTCATTTTCTCATAGGTCCCTCATaGGCACACACCTTCAATAAATCCCTTCCACAGATA +
Preference number: 3 (lower is better)
Translates to: LSCFVHFLIGPS*AHTFNKSLPQI
Trigger: TATCTGTGGAAGGGATTTATTGAAGGTGTGTGCTCATGAGGGACCTATGAGAAAATGAACGAAGCAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR GCA 72 bp TGGAAACATGGTGATCATGTTTTCTGGACTCAAATCTaGTTCAGGACTAAGATTCTGAAGTACCATTCTGGC +
Preference number: 3 (lower is better)
Translates to: WKHGDHVFWTQI*FRTKILKYHSG
Trigger: GCCAGAATGGTACTTCAGAATCTTAGTCCTGAAGCAGATTTGAGTCCAGAAAACATGATCACCATGTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp CCTTCACTCATTTTCACCTGCATGACTGTTACAGCCTTTGCACCTACATATTTCATAATACAACACGTGTaGAACAGACATTCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: PSLIFTCMTVTAFAPTYFIIQHV*NRHSAE
Trigger: CTCTGCAGAATGTCTGTTCAACACGTGTTGTATTAT...GAAATATGTAGGTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTGAGCCTTTCCTGGTaGGCTGACAGAGATCATGGA +
Preference number: 3 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLSLSW*ADRDHG
Trigger: TCCATGATCTCTGTCAGCCAACCAGGAAAGGCTCAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR CAA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTCTTTGGGAGGCCTTTTaGTCTCCTGCTTTTTCTTTA +
Preference number: 3 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGLWEAF*SPAFSL
Trigger: TAAAGAAAAAGCAGGAGACAAAAAGGCCTCCCAAAG...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCACAGAACATGGCAGGTTaGATTGCAACTCTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAQNMAG*IATLFD
Trigger: ATCAAACAGAGTTGCAATCAAACCTGCCATGTTCTG...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR-3UTR CAA 90 bp AGAAAAAGAAAGATGGACATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTGAGTCAATGAAGCTTTaGAATATTGCTGCCTGTCAG +
Preference number: 3 (lower is better)
Translates to: RKRKMDMQLSNSRWSMKPESMKL*NIAACQ
Trigger: CTGACAGGCAGCAATATTCAAAAGCTTCATTGACTC...AGGCTTCATTGACCATCTACTGTTGCTTAGTTGCATGTCCATCTTTCTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACATGACTCTGGGTTGCTaGAAGGACAGCAATGAATGC +
Preference number: 3 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNMTLGC*KDSNEC
Trigger: GCATTCATTGCTGTCCTTCAAGCAACCCAGAGTCAT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR CAA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTCTGGATGTAAAGAACTaGCCAACTCATCAAATCCTA +
Preference number: 3 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGLDVKN*PTHQIL
Trigger: TAGGATTTGATGAGTTGGCAAGTTCTTTACATCCAG...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTTTAACTTTTCGAAGTTaGTTAGCCATGACATGGGCT +
Preference number: 3 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGLTFRS*LAMTWA
Trigger: AGCCCATGTCATGGCTAACAAACTTCGAAAAGTTAA...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR TCA 72 bp ATGACAGAACATGGCAGGTTTGATTGCAACTCTGTTTaGTTCCAAAGTGTTTGCTCTTTCCACTTCATCGTA +
Preference number: 3 (lower is better)
Translates to: MTEHGRFDCNSV*FQSVCSFHFIV
Trigger: TACGATGAAGTGGAAAGAGCAAACACTTTGGAATCAAACAGAGTTGCAATCAAACCTGCCATGTTCTGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393743.8
ENST00000511317.2
ENST00000679510.1
ENST00000680771.1
3UTR TCA 72 bp CAAAGATGTCCATATCATATATTCCCCAGAAACCGATaGATAGGTCAGGTTACATGGCAAAGGGGAATGAAT +
Preference number: 3 (lower is better)
Translates to: QRCPYHIFPRNR*IGQVTWQRGMN
Trigger: ATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAATATATGATATGGACATCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR TCA 72 bp CATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTaGAACCCACAGGCAGCTACATCTACGAAGAGGAAA +
Preference number: 3 (lower is better)
Translates to: HFVLFMLVSSVY*NPQAATSTKRK
Trigger: TTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR TCA 72 bp GCTTTCAAGCAAGCAGTTAACCCCACCATTTCAACCTaGAGTTTCACACAGCTACTTTTACAGGATTTCAAA +
Preference number: 3 (lower is better)
Translates to: AFKQAVNPTIST*SFTQLLLQDFK
Trigger: TTTGAAATCCTGTAAAAGTAGCTGTGTGAAACTTCAGGTTGAAATGGTGGGGTTAACTGCTTGCTTGAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp AGAAAAAGAAAGATGGACATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTTTGATTCCAAAGTGTTaGCTCTTTCCACTTCATCGT +
Preference number: 3 (lower is better)
Translates to: RKRKMDMQLSNSRWSMKPLIPKC*LFPLHR
Trigger: ACGATGAAGTGGAAAGAGCAAACACTTTGGAATCAA...AGGCTTCATTGACCATCTACTGTTGCTTAGTTGCATGTCCATCTTTCTTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGGCAATAAAAGTAGATaGTCCCTTAAGAGCCTTTAC +
Preference number: 3 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDGNKSR*SLKSLY
Trigger: GTAAAGGCTCTTAAGGGACAATCTACTTTTATTGCC...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGTGCATCTTGGAACTTaGGTGGAAAATATCTTCTTC +
Preference number: 3 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHVHLGT*VENIFF
Trigger: GAAGAAGATATTTTCCACCAAAGTTCCAAGATGCAC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR CAA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTCCAACTTTTCCAAATTaGAAACATGGCATCATACAG +
Preference number: 3 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGPTFPN*KHGIIQ
Trigger: CTGTATGATGCCATGTTTCAAATTTGGAAAAGTTGG...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR GCA 72 bp TCTTTGAATGCAAGTCACATTAGTCATTCCCTTATCTaGCATCATAGCTCTGACCATGTTTGTAAGGTCTAT +
Preference number: 3 (lower is better)
Translates to: SLNASHISHSLI*HHSSDHVCKVY
Trigger: ATAGACCTTACAAACATGGTCAGAGCTATGATGGCAGATAAGGGAATGACTAATGTGACTTGCATTCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR-3UTR CAA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTTGATTCCAAAGTGTTaGCTCTTTCCACTTCATCGT +
Preference number: 3 (lower is better)
Translates to: FLYISLVESFCVIYASVQLIPKC*LFPLHR
Trigger: ACGATGAAGTGGAAAGAGCAAACACTTTGGAATCAA...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCAGAACATGGCAGGTTaGATTGCAACTCTGTTTGAT +
Preference number: 3 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNQNMAG*IATLFD
Trigger: ATCAAACAGAGTTGCAATCAAACCTGCCATGTTCTG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCATCAAGGAACACCTTaGATTGATAAAACTCGAAGT +
Preference number: 3 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHHQGTP*IDKTRS
Trigger: ACTTCGAGTTTTATCAATCAAAGGTGTTCCTTGATG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR TCA 72 bp TATTTTCGAGTGTCATCACTGACCTACCACAAAAATTaGTCAGTTCTGTCTCTACAACACCAAATTTCCTTC +
Preference number: 3 (lower is better)
Translates to: YFRVSSLTYHKN*SVLSLQHQISF
Trigger: GAAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGTGATGACACTCGAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR TCA 72 bp AAATGGCTGTCCAACCTCAAAGTCTCTGACCAACTTTaGTACGGTATTCCAGAGATATTCATAATCTTTCAT +
Preference number: 3 (lower is better)
Translates to: KWLSNLKVSDQL*YGIPEIFIIFH
Trigger: ATGAAAGATTATGAATATCTCTGGAATACCGTATCAAAGTTGGTCAGAGACTTTGAGGTTGGACAGCCATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR TCA 72 bp CCTCTAATGCCCTTCCTTTTCAGCCTCTGGATGTTATaGTCCATCATGAGAAAATTCTATCACATATTGATA +
Preference number: 3 (lower is better)
Translates to: PLMPFLFSLWML*SIMRKFYHILI
Trigger: TATCAATATGTGATAGAATTTTCTCATGATGGATCATAACATCCAGAGGCTGAAAAGGAAGGGCATTAGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTGATTCCAAAGTGTTaGCTCTTTCCACTTCATCGT +
Preference number: 3 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLIPKC*LFPLHR
Trigger: ACGATGAAGTGGAAAGAGCAAACACTTTGGAATCAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR-3UTR CAA 90 bp ATACCTTTCAATCTAAGTCTTTATGTTCATTCTGCATTCCTGCCACAAAAGTCTACTGTAGCAGTTCTATaGCTTTCCAGTTACTCCATT +
Preference number: 3 (lower is better)
Translates to: IPFNLSLYVHSAFLPQKSTVAVL*LSSYSI
Trigger: AATGGAGTAACTGGAAAGCAATAGAACTGCTACAGT...AGACTTTTGTGGCAGGAATGCAGAATGAACATAAAGACTTAGATTGAAAGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513997.1
3UTR TCA 72 bp TTGGGCCCACTAAAATCCTTCTTTGACTTAATAGTTTaGGTCACGATGATTTTCGAAGAGACTGTTTCTAAT +
Preference number: 3 (lower is better)
Translates to: LGPLKSFFDLIV*VTMIFEETVSN
Trigger: ATTAGAAACAGTCTCTTCGAAAATCATCGTGACTCAAACTATTAAGTCAAAGAAGGATTTTAGTGGGCCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR TCA 72 bp AAACATTTTGGCCCTAGAGTTGACAGAATTAGACATTaGGAGCAAGGAAGAGATGTTATATTAGCTAAGTCT +
Preference number: 3 (lower is better)
Translates to: KHFGPRVDRIRH*EQGRDVILAKS
Trigger: AGACTTAGCTAATATAACATCTCTTCCTTGCTCTCAATGTCTAATTCTGTCAACTCTAGGGCCAAAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGCAGGGGAGAACGCTCTaGCTATGGAAGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWQGRTL*LWKGLA
Trigger: GGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTG...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCCAAAGACCCGCGAGCTaGGCGCCCCGCGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCQRPAS*APRGEG
Trigger: TCCCTCCCCGCGGGGCGCGCAGCTCGCGGGTCTTTG...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ATTGCTGCCTGTCAGTGCATGATGCCTGGGGCTGAGACTCTAGTCTGGATGAAACTGCCTGTCAGTGCATaGTGCCTGGGGCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: IAACQCMMPGAETLVWMKLPVSA*CLGLRL
Trigger: GAGTCTCAGCCCCAGGCATCATGCACTGACAGGCAG...TTTCATCCAGACTAGAGTCTCAGCCCCAGGCATCATGCACTGACAGGCAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp GGAGATGAAAGGGAGCCACAAGCCAAGGAATGCCGGCAGCCTCTAAAAGTTGGAGTAACCGCAGCACTTTaGGAGGGCAAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GDEREPQAKECRQPLKVGVTAAL*EGKAGR
Trigger: TCTGCCTGCCTTGCCCTCCCAAAGTGCTGCGGTTAC...TCCAACTTTTAGAGGCTGCCGGCATTCCTTGGCTTGTGGCTCCCTTTCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGGAGGCCTCTTGGAGATaGCTGGGTGGTTACGACCTC +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWEASWR*LGGYDL
Trigger: GAGGTCGTAACCACCCAGGCATCTCCAAGAGGCCTC...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGTCTGGGCACAGTTCCTaGGCCCGAGGCCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWSGHSS*ARGQLF
Trigger: GAAAAGTTGGCCTCGGGCCCAGGAACTGTGCCCAGA...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCAAAGACCCGCGAGCTaGGCGCCCCGCGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHQRPAS*APRGEG
Trigger: TCCCTCCCCGCGGGGCGCGCAGCTCGCGGGTCTTTG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGCAGTCTTGTGTGCCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWQSCVP*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGGCACACAAGACTG...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp GCTCCCCTCAGGCTTATGCACTGTCTACACGTTGCTCAAAAGATGAAGCCCAAAGAGGTGAGGTTGCAGTaGGCCGAGATCGCAACACTT +
Preference number: 4 (lower is better)
Translates to: APLRLMHCLHVAQKMKPKEVRLQ*AEIATL
Trigger: AAGTGTTGCGATCTCGGCTCACTGCAACCTCACCTC...TTTGGGCTTCATCTTTTGAGCAACGTGTAGACAGTGCATAAGCCTGAGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCATCTTTCCATTCTTGCTaGTGCCTGTGCCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: SGENALTMEGPGPKICRASFHSC*CLCLQP
Trigger: AGGTTGGAGGCACAGGCAGCAGCAAGAATGGAAAGA...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCAGGCTTACACCTCCTATaGTGTCCCTGGGTTTTTACC +
Preference number: 4 (lower is better)
Translates to: SGENALTMEGPGPKICRAGLHLL*CPWVFT
Trigger: GGTAAAAACCCAGGGACAGCATAGGAGGTGTAAGCC...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGGTGATCTCAGCTCACTaGAACCTCCACTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWVISAH*NLHFLG
Trigger: ACCCAGGAAGTGGAGGTTGCAGTGAGCTGAGATCAC...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCAGGCACTCAAGGCAGATaGGTCAGTTCATGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SGENALTMEGPGPKICRAGTQGR*VSSWKG
Trigger: TCCTTTCCATGAACTGACCCATCTGCCTTGAGTGCC...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCCCCGCGGGGAGGGAGTaGAACAGAGACCTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSPAGRE*NRDLAQ
Trigger: CTGCGCTAGGTCTCTGTTTCACTCCCTCCCCGCGGG...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCTGGATCTCAGTTTCCTaGCCAGAGGAGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGWISVS*PEEGSL
Trigger: CAGAGAGCCCTCCTCTGGTCAGGAAACTGAGATCCA...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGTTCCATTCTTGCTGCTaGCTGTGCCTCCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWFHSCC*LCLQPE
Trigger: TTCAGGTTGGAGGCACAGGCAGCAGCAAGAATGGAA...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCAGCCTTGGTCTCGTGTaGCTTTTTGCTCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGSLGLV*LFALGP
Trigger: GGGCCCAAGAGCAAAAAGGCACACGAGACCAAGGCT...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGCTCCTATGCTGTCCCTaGGTTTTTACCTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWLLCCP*VFTSHA
Trigger: AGCATGGGAGGTAAAAACCCAGGGACAGCATAGGAG...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CAA 72 bp TCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTaGAGTTGGGTTGCTAAGGCTCTCAGCTGCACCATT +
Preference number: 4 (lower is better)
Translates to: SPSLLVVDATAA*SWVAKALSCTI
Trigger: AATGGTGCAGCTGAGAGCCTTAGCAACCCAACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGTCACTCAGGGGTTTATaGGAATGCCAGTGCACAAGT +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWSLRGL*ECQCTS
Trigger: ACTTGTGCACTGGCATTCTCATAAACCCCTGAGTGA...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCTTGGGAAAGCCGGCCTaGCGACCCACATGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFLGKPA*RPTCLL
Trigger: TAAAAGACATGTGGGTCGTCAGGCCGGCTTTCCCAA...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTAAGGGCCTTTGTGGGTaGAACGTACACGACCACCCC +
Preference number: 4 (lower is better)
Translates to: NSSHSPSLLVVDATAALSKGLCG*NVHDHP
Trigger: GGGGTGGTCGTGTACGTTGCACCCACAAAGGCCCTT...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCAAATGTCAGATCCTTCTaGCCAGACTTGTGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: SGENALTMEGPGPKICRANVRSF*PDLCKQ
Trigger: CTGCTTACACAAGTCTGGCCAGAAGGATCTGACATT...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGTACCCACATAAAGTTTaGTGTTGCTTGGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGEYPHKV*CCLGPH
Trigger: GTGGGGTCCCAAGCAACACCAAACTTTATGTGGGTA...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGTGGCCCCTTGCTTTATaGGAATGGATGCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWWPLAL*EWMQME
Trigger: TTCCATCTGCATCCATTCCCATAAAGCAAGGGGCCA...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCAGTCCACCACCGCACCTaGCTAAATTTTGTATCTTCA +
Preference number: 4 (lower is better)
Translates to: SGENALTMEGPGPKICRAVHHRT*LNFVSS
Trigger: TGAAGATACAAAATTTAGCCAGGTGCGGTGGTGGAC...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGAGGAAAGTACAACGTTaGCCTTCCTTGCCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWRKVQR*PSLPKN
Trigger: ATTCTTGGGCAAGGAAGGTCAACGTTGTACTTTCCT...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp GAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCTGTCAGGAGCCTGAGAGCGATTaGCACCGATTGTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: ENTRIEESMKLLNIAACQEPESD*HRLCLE
Trigger: CTCTAGGCACAATCGGTGTCAATCGCTCTCAGGCTC...CTGACAGGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCGAGCCTGAGAGCGATTaGCACCGATTGTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCEPESD*HRLCLE
Trigger: CTCTAGGCACAATCGGTGTCAATCGCTCTCAGGCTC...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR GCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTTCTTGCTGCTGCCTGTaGCTCCAACCTGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: NSSHSPSLLVVDATAALSSCCCL*LQPELA
Trigger: TGCCAGTTCAGGTTGGAGGCACAGGCAGCAGCAAGA...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCGGACTCAGGACCGGTaGTGTCCAAAGACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHRTQDR*CPKTRE
Trigger: CTCGCGGGTCTTTGGACACCACCGGTCCTGAGTCCG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATCGGACTCAGGACCGGTaGTGTCCAAAGACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDRTQDR*CPKTRE
Trigger: CTCGCGGGTCTTTGGACACCACCGGTCCTGAGTCCG...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGAAGTTTGGTGTTGCTTaGGACCCCACTAGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGEKFGVA*DPTRFC
Trigger: ACAAAACCTAGTGGGGTCCCAAGCAACACCAAACTT...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTCCCCTTGACTCAAGGTaGGGCAATTCTCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NSSHSPSLLVVDATAALSPLDSR*GNSLVS
Trigger: GGACACCAGAGAATTGCCCCACCTTGAGTCAAGGGG...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCCCGCGGGGAGGGAGTaGAACAGAGACCTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNPAGRE*NRDLAQ
Trigger: CTGCGCTAGGTCTCTGTTTCACTCCCTCCCCGCGGG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTCTAGCACAAGCTCTTTaGGAAAGAGGCAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLLAQAL*ERGRWS
Trigger: ACTCCATCTGCCTCTTTCTCAAAGAGCTTGTGCTAG...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCACAGTTGCTGCCACTTaGTTAACAAGGGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGTVAAT*LTRAFV
Trigger: CACAAAGGCCCTTGTTAATCAAGTGGCAGCAACTGT...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp GCAATTGAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCGGCAGGAGAATTGCTTaGACCTGGGAGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AIENTRIEESMKLLNIAAGRRIA*TWEVRL
Trigger: CAACCTCACCTCCCAGGTTCAAGCAATTCTCCTGCC...GGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTACAATTGCCCTAAACTaGCAGAGGCCTCTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLTIALN*QRPLGD
Trigger: ATCTCCAAGAGGCCTCTGTCAGTTTAGGGCAATTGT...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTTGGCCAGGCTTGTCTTaGACTCCTGACCTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTWPGLS*TPDLVV
Trigger: GACCACGAGGTCAGGAGTTCAAGACAAGCCTGGCCA...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCCATCATACAGCTGGATaGTTTCTCGAGGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFHHTAG*FLEVKG
Trigger: CCCTTTCACCTCGAGAAAGCATCCAGCTGTATGATG...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCGCAGCCAGTCTTTTATaGATCCGGCGGGAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTAASLL*IRREFR
Trigger: CCGAAACTCCCGCCGGATGCATAAAAGACTGGCTGC...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAAGATACAGTCTTGTGTaGCTTGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIRYSLV*LGLPKC
Trigger: GCACTTTGGGAGGCCAAGGCACACAAGACTGTATCT...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGCAGAAGCCACATTCTTaGTTTTCTTCACCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWQKPHS*FSSPSL
Trigger: AAGGGAAGGTGAAGAAAAGCAAGAATGTGGCTTCTG...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAGCTAAGGCTCTCAGCTaGACCATTCCCTGGACAATT +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIAKALS*TIPWTI
Trigger: AATTGTCCAGGGAATGGTGCAGCTGAGAGCCTTAGC...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCAGAGAACTTCACCACTTaGCAGATTTTTCGTAAAACG +
Preference number: 4 (lower is better)
Translates to: SGENALTMEGPGPKICRAENFTT*QIFRKT
Trigger: CGTTTTACGAAAAATCTGCCAAGTGGTGAAGTTCTC...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTCTTGCAAGTAGTCTTTaGGAAAGCCGGCCTGACGAC +
Preference number: 4 (lower is better)
Translates to: NSSHSPSLLVVDATAALSLASSL*ESRPDD
Trigger: GTCGTCAGGCCGGCTTTCCCAAAGACTACTTGCAAG...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCTCTGAAGTACCATTCTaGCCTGCTCTACGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFSEVPF*PALRCH
Trigger: ATGGCAACGTAGAGCAGGCCAGAATGGTACTTCAGA...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp GGAGATGAAAGGGAGCCACAAGCCAAGGAATGCCGGCAGCCTCTAAAAGTTGGAAAGGGGAATGAATTATaGCTGCAGTGCGAATTAAAG +
Preference number: 4 (lower is better)
Translates to: GDEREPQAKECRQPLKVGKGNEL*LQCELK
Trigger: CTTTAATTCGCACTGCAGCCATAATTCATTCCCCTT...TCCAACTTTTAGAGGCTGCCGGCATTCCTTGGCTTGTGGCTCCCTTTCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAACAGCTGCTTTGAGTTaGGTTGCTAAGGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFITAALS*VAKALS
Trigger: GCTGAGAGCCTTAGCAACCCAACTCAAAGCAGCTGT...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAGGTTACCCCAGACCTaGCCTAGGACTCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHRLPQT*PRTRRS
Trigger: AGAGCGCCGAGTCCTAGGCCAGGTCTGGGGTAACCT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCGAAGTTCAGGGAAGTTaGAATACGCATACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGEVQGS*NTHTRH
Trigger: ATGCCGAGTATGCGTATTTCAACTTCCCTGAACTTC...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTATCAGATTCTTGCCCTaGGGAAAGTACAACGTTGAC +
Preference number: 4 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLIRFLP*GKYNVD
Trigger: GTCAACGTTGTACTTTCCTCAGGGCAAGAATCTGAT...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCTGGATCTCAGTTTCCTaGCCAGAGGAGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSWISVS*PEEGSL
Trigger: CAGAGAGCCCTCCTCTGGTCAGGAAACTGAGATCCA...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCAATCAACCACAAAAGATaGCGTTGGAATAAAACCCAA +
Preference number: 4 (lower is better)
Translates to: SGENALTMEGPGPKICRAINHKR*RWNKTQ
Trigger: TTGGGTTTTATTCCAACGTCATCTTTTGTGGTTGAT...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTCCCACCATTTCAACCTaGAGTTTCACACAGCTACTT +
Preference number: 4 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLPTIST*SFTQLL
Trigger: AAGTAGCTGTGTGAAACTTCAGGTTGAAATGGTGGG...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTACCCAGTTTTGGCGATaGGGAGCAAGCAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: NSSHSPSLLVVDATAALSTQFWR*GASSRI
Trigger: AATTCTGCTGCTTGCTCCTCATCGCCAAAACTGGGT...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTAAACAGCACTGGAGCCTaGGAGCGATTGACACCGATT +
Preference number: 4 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELNSTGA*ERLTPI
Trigger: AATCGGTGTCAATCGCTCTCAGGCTCCAGTGCTGTT...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR TCA 90 bp ATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTAAGAATGGGGTACCCACACGTGTCCCATGTCTTTaGCATACACTGCTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: MQLSNSRWSMKPKNGVPTRVPCL*HTLLVA
Trigger: TGCCACAAGCAGTGTATGTCAAAGACATGGGACACG...TGTGGGTACCCCATTCTTAGGCTTCATTGACCATCTACTGTTGCTTAGTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp ACTGACCTACCACAAAAATTGATCAGTTCTGTCTCTACAACACCAAATTTCCTTTCACTCCAGCCTGGGTaGCAGAGCGTGACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: TDLPQKLISSVSTTPNFLSLQPG*QSVTLR
Trigger: ACGGAGAGTCACGCTCTGTCACCCAGGCTGGAGTGA...AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCGCCTGGGCAGCATGGTaGAATCCCATCTGTACTAAA +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCAWAAW*NPICTK
Trigger: TTTAGTACAGATGGGATTTCACCATGCTGCCCAGGC...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGTTCGAGTGTCATCACTaGCCTACCACAAAAATTGAT +
Preference number: 4 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGEFECHH*PTTKID
Trigger: ATCAATTTTTGTGGTAGGTCAGTGATGACACTCGAA...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAAGGGCCTTTGTGGGTaGAACGTACACGACCACCCC +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHKGLCG*NVHDHP
Trigger: GGGGTGGTCGTGTACGTTGCACCCACAAAGGCCCTT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCAAAGGGCCTTTGTGGGTaGAACGTACACGACCACCCC +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAKGLCG*NVHDHP
Trigger: GGGGTGGTCGTGTACGTTGCACCCACAAAGGCCCTT...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGTTTTCTTTAGGAAAGTaGTCACACTTTCAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWFSLGK*SHFQLR
Trigger: ACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGGGCCTTTTTGTCTCCTaGTTTTTCTTTAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWGLFVS*FFFRKV
Trigger: CACTTTCCTAAAGAAAAAGCAGGAGACAAAAAGGCC...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCCTCCCCTCAGGCTTATaGACTGTCTACACGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTLPSGL*TVYTLL
Trigger: GAGCAACGTGTAGACAGTGCATAAGCCTGAGGGGAG...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATAGCGCAGAGCCCAGGTaGAAGTTCCAGGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDSAEPR*KFQVTP
Trigger: TGGGGTAACCTGGAACTTCCACCTGGGCTCTGCGCT...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCTGTTCTCAGAGGAAATaGCTGTCCAACCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFCSQRK*LSNLKV
Trigger: GACTTTGAGGTTGGACAGCCATTTCCTCTGAGAACA...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp ATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTAAGAATGGGGTACCCACAAGCCCTGCTGACAACTaGATTGAGCCCAAGAAGACA +
Preference number: 4 (lower is better)
Translates to: MQLSNSRWSMKPKNGVPTSPADN*IEPKKT
Trigger: TGTCTTCTTGGGCTCAATCCAGTTGTCAGCAGGGCT...TGTGGGTACCCCATTCTTAGGCTTCATTGACCATCTACTGTTGCTTAGTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp ATCGTGTCCCATGTCTTTGACATACACTGCTTGTGGCAATTGAGAATACCAGGAAAAGGTCCCTGTAAGTaGAAGAGTGAGGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: IVSHVFDIHCLWQLRIPGKGPCK*KSEAGE
Trigger: CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTT...TCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAAGACATGGGACACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTGGTGGGGCAATTCTCTaGTGTCCTGGCATTCCCAGT +
Preference number: 4 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTGGAIL*CPGIPS
Trigger: ACTGGGAATGCCAGGACACCAGAGAATTGCCCCACC...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTGACCTCTCCTGGGGATaGGAAATAGCCCACACCCAA +
Preference number: 4 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTDLSWG*EIAHTQ
Trigger: TTGGGTGTGGGCTATTTCCCATCCCCAGGAGAGGTC...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTCCTCTTGGAGATGCCTaGGTGGTTACGACCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTPLGDA*VVTTSP
Trigger: AGGAGAGGTCGTAACCACCCAGGCATCTCCAAGAGG...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCCAACCTCAAAGTCTCTaGCCAACTTTGATACGGTAT +
Preference number: 4 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFQPQSL*PTLIRY
Trigger: ATACCGTATCAAAGTTGGTCAGAGACTTTGAGGTTG...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCACAGTTGCTGCCACTTaGTTAACAAGGGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCTVAAT*LTRAFV
Trigger: CACAAAGGCCCTTGTTAATCAAGTGGCAGCAACTGT...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTGACGATACTCCCTGGTaGAAACACCACAGAGAACTT +
Preference number: 4 (lower is better)
Translates to: NSSHSPSLLVVDATAALSDDTPW*KHHREL
Trigger: AAGTTCTCTGTGGTGTTTTCACCAGGGAGTATCGTC...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTTCAGGACTAAGATTCTaGAGTACCATTCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NSSHSPSLLVVDATAALSSGLRF*STILAC
Trigger: GCAGGCCAGAATGGTACTTCAGAATCTTAGTCCTGA...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCGTGTCCACTGCTTTTTaGTCAGCATATGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCVSTAF*SAYVQS
Trigger: GGACTGCACATATGCTGATCAAAAAGCAGTGGACAC...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ATCGTGTCCCATGTCTTTGACATACACTGCTTGTGGCAATTGAGAATACCAGGAACTGCTTGTGGCAATTaGGAATACCAGGATCGAGGA +
Preference number: 4 (lower is better)
Translates to: IVSHVFDIHCLWQLRIPGTACGN*EYQDRG
Trigger: TCCTCGATCCTGGTATTCTCAATTGCCACAAGCAGT...TCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAAGACATGGGACACGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCGTGTCCAGTGTATACTaGAACCCACAGGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTVSSVY*NPQAAT
Trigger: TGTAGCTGCCTGTGGGTTTCAGTATACACTGGACAC...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR TCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCGGAAAGATTCAGAGATaGGATACCAAAAAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGGKIQR*DTKKGA
Trigger: TGCTCCCTTTTTGGTATCTCATCTCTGAATCTTTCC...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCTGGGCAGGTTCAGTGTaGTCTCAAAGGTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTWAGSV*SQRSLI
Trigger: TATCAGGGACCTTTGAGATCACACTGAACCTGCCCA...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTCTTGCTGCTGCCTGTaGCTCCAACCTGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHSCCCL*LQPELA
Trigger: TGCCAGTTCAGGTTGGAGGCACAGGCAGCAGCAAGA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTAGAACATCAGATTCTTaGCCTGAGGAAAGTACAACG +
Preference number: 4 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLRTSDS*PEESTT
Trigger: CGTTGTACTTTCCTCAGGGCAAGAATCTGATGTTCT...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCTCTGGTGTCTGTACATaGTTGGAAGAAGGTATGCAT +
Preference number: 4 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFSGVCT*LEEGMH
Trigger: ATGCATACCTTCTTCCAAGCATGTACAGACACCAGA...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATAGCCTTGGTCTCGTGTaGCTTTTTGCTCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDSLGLV*LFALGP
Trigger: GGGCCCAAGAGCAAAAAGGCACACGAGACCAAGGCT...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAACCGAGCTGGCCCAATaGCAACTGAATATTTATTCC +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFITELAQ*QLNIYS
Trigger: GGAATAAATATTCAGTTGGCATTGGGCCAGCTCGGT...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAGCCTCCAACCTGAACTaGCAAGTATTAAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIASNLN*QVLKVA
Trigger: TGCTACCTTTAATACTTGCCAGTTCAGGTTGGAGGC...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCCAATTATTTCAGCCTTaGTCTCGTGTGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGQLFQP*SRVPFC
Trigger: GCAAAAAGGCACACGAGACCAAGGCTGAAATAATTG...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp ACCTTGTTTCCACTAGAGTTCCAGTTATTTTCGAGTGTCATCACTGACCTACCAAAACTAGAGACCGGATaGAACCCTAAGGAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TLFPLEFQLFSSVITDLPKLETG*NPKEPS
Trigger: AGAGGGCTCCTTAGGGTTCCATCCGGTCTCTAGTTT...TGGTAGGTCAGTGATGACACTCGAAAATAACTGGAACTCTAGTGGAAACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTTGGAAGAGGCCAGAGTaGGACTATCTAAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTWKRPE*DYLKGP
Trigger: GGGACCCTTTAGATAGTCCCACTCTGGCCTCTTCCA...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCGGGAATGGATGCAGATaGAAGAGGCCAGAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFGNGCR*KRPEWD
Trigger: GTCCCACTCTGGCCTCTTCCATCTGCATCCATTCCC...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACAGGTTACCCCAGACCTaGCCTAGGACTCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYRLPQT*PRTRRS
Trigger: AGAGCGCCGAGTCCTAGGCCAGGTCTGGGGTAACCT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
3UTR CAA 72 bp ATTGAGAATACCAGGATCGAGGAGTCAATGAAGCTTTaGAATATTGCTGCCTGTCAGTGCATGATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: IENTRIEESMKL*NIAACQCMMPG
Trigger: CCCAGGCATCATGCACTGACAGGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR CAA 72 bp TCAAATGCCCATAATCTCCATGTTGACATAGTGAGCTaGGAGTCTATCCCTGACACATCAGGCCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SNAHNLHVDIVS*ESIPDTSGPFS
Trigger: TGAGAAAGGGCCTGATGTGTCAGGGATAGACTCCAAGCTCACTATGTCAACATGGAGATTATGGGCATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAGTCTCTGACCAACTTTaGTACGGTATTCCAGAGATA +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIVSDQL*YGIPEI
Trigger: TATCTCTGGAATACCGTATCAAAGTTGGTCAGAGAC...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTATCACTCAGGGGTTTATaGGAATGCCAGTGCACAAGT +
Preference number: 4 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELSLRGL*ECQCTS
Trigger: ACTTGTGCACTGGCATTCTCATAAACCCCTGAGTGA...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCAGGGACATCGGATCATaGCAAGGAGATGTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSRDIGS*QGDVPR
Trigger: TCTGGGAACATCTCCTTGTCATGATCCGATGTCCCT...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTAGGGACATCGGATCATaGCAAGGAGATGTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGRDIGS*QGDVPR
Trigger: TCTGGGAACATCTCCTTGTCATGATCCGATGTCCCT...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCCCATACCTTTCAATATaGTCTGTTGTTAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGPYLSI*SVVSAA
Trigger: TGCTGCACTAACAACAGATCATATTGAAAGGTATGG...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAACAGCACTGGAGCCTaGGAGCGATTGACACCGATT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHNSTGA*ERLTPI
Trigger: AATCGGTGTCAATCGCTCTCAGGCTCCAGTGCTGTT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ATCGTGTCCCATGTCTTTGACATACACTGCTTGTGGCAATTGAGAATACCAGGAACAGTAGATGGTCAATaGAGCCTAAGAATGGGGTAC +
Preference number: 4 (lower is better)
Translates to: IVSHVFDIHCLWQLRIPGTVDGQ*SLRMGY
Trigger: GTACCCCATTCTTAGGCTTCATTGACCATCTACTGT...TCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAAGACATGGGACACGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTACCTTGCCCAAGTTTTTaGGACAGCTTCCAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELPCPSF*DSFQVC
Trigger: ACAGACTTGGAAGCTGTCTCAAAAACTTGGGCAAGG...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCGTGTCCAGTGTATACTaGAACCCACAGGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSVSSVY*NPQAAT
Trigger: TGTAGCTGCCTGTGGGTTTCAGTATACACTGGACAC...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR TCA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTAGCCTCTGGATGTTATaGTCCATCATGAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLSLWML*SIMRKF
Trigger: GAATTTTCTCATGATGGATCATAACATCCAGAGGCT...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTCTTGCTGCTGCCTGTaGCTCCAACCTGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQSCCCL*LQPELA
Trigger: TGCCAGTTCAGGTTGGAGGCACAGGCAGCAGCAAGA...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCAAGAAATGGAGGTTCTaGCCAGGCTTAAATGATATC +
Preference number: 4 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFKKWRF*PGLNDI
Trigger: GATATCATTTAAGCCTGGGCAGAACCTCCATTTCTT...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCCGACCAAATACCTTCTaGAAAGTCTCAGTGTCCACT +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCRPNTF*KVSVST
Trigger: AGTGGACACTGAGACTTTGCAGAAGGTATTTGGTCG...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp ATCGTGTCCCATGTCTTTGACATACACTGCTTGTGGCAATTGAGAATACCAGGAGCTTTTGAATATTGCTaGCTGTCAGTGCATGATGCC +
Preference number: 4 (lower is better)
Translates to: IVSHVFDIHCLWQLRIPGAFEYC*LSVHDA
Trigger: GGCATCATGCACTGACAGGCAGCAATATTCAAAAGC...TCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAAGACATGGGACACGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp GCTCCCCTCAGGCTTATGCACTGTCTACACGTTGCTCAAAAGATGAAGCCCAAAGCACCTACATATTTCTaGCACATATATAATCCGCAT +
Preference number: 4 (lower is better)
Translates to: APLRLMHCLHVAQKMKPKAPTYF*HIYNPH
Trigger: ATGCGGATTATATATGTGGCAGAAATATGTAGGTGC...TTTGGGCTTCATCTTTTGAGCAACGTGTAGACAGTGCATAAGCCTGAGGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp GCAATTGAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCGCCTTTACAAAGAAATaGAGCCCTGCTGACAACTGG +
Preference number: 4 (lower is better)
Translates to: AIENTRIEESMKLLNIAAAFTKK*SPADNW
Trigger: CCAGTTGTCAGCAGGGCTGCATTTCTTTGTAAAGGC...GGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACAGCGCAGAGCCCAGGTaGAAGTTCCAGGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSAEPR*KFQVTP
Trigger: TGGGGTAACCTGGAACTTCCACCTGGGCTCTGCGCT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCGCCTCCAACCTGAACTaGCAAGTATTAAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCASNLN*QVLKVA
Trigger: TGCTACCTTTAATACTTGCCAGTTCAGGTTGGAGGC...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTCTGGGCACAGTTCCTaGGCCCGAGGCCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSGHSS*ARGQLF
Trigger: GAAAAGTTGGCCTCGGGCCCAGGAACTGTGCCCAGA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTCTGGGCACAGTTCCTaGGCCCGAGGCCAACTTTTC +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYSGHSS*ARGQLF
Trigger: GAAAAGTTGGCCTCGGGCCCAGGAACTGTGCCCAGA...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp AATACAACACGTGTTGAACAGACATTCTGCAGAGCCTTTGGGGAGTTGAAATGCATTCTGCAGAGCCTTTaGGGAGTTGAAATGCATAGC +
Preference number: 4 (lower is better)
Translates to: NTTRVEQTFCRAFGELKCILQSL*GVEMHS
Trigger: GCTATGCATTTCAACTCCCCAAAGGCTCTGCAGAAT...GCATTTCAACTCCCCAAAGGCTCTGCAGAATGTCTGTTCAACACGTGTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp ATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTAAGAATGGGGTACCCACAGAGTCAGACGGAGCCTaGAGAAAACATCAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: MQLSNSRWSMKPKNGVPTESDGA*RKHQRK
Trigger: TTTTCTCTGATGTTTTCTCCAGGCTCCGTCTGACTC...TGTGGGTACCCCATTCTTAGGCTTCATTGACCATCTACTGTTGCTTAGTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTCTGCCCAGGCTTAAATaGTATCTCACAGATACATGT +
Preference number: 4 (lower is better)
Translates to: NSSHSPSLLVVDATAALSLPRLK*YLTDTC
Trigger: ACATGTATCTGTGAGATATCATTTAAGCCTGGGCAG...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCAGGAAAGTACAACGTTaGCCTTCCTTGCCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTRKVQR*PSLPKN
Trigger: ATTCTTGGGCAAGGAAGGTCAACGTTGTACTTTCCT...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTGGATCTCAGTTTCCTaGCCAGAGGAGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNWISVS*PEEGSL
Trigger: CAGAGAGCCCTCCTCTGGTCAGGAAACTGAGATCCA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCGTCTCTGACCAACTTTaGTACGGTATTCCAGAGATA +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCVSDQL*YGIPEI
Trigger: TATCTCTGGAATACCGTATCAAAGTTGGTCAGAGAC...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCGCTGTCTTTGATTGGTaGTGGTTTCTTTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGAVFDW*WFLFKK
Trigger: TTTCTTGAAAAGAAACCATCACCAATCAAAGACAGC...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCCCCACCATTTCAACCTaGAGTTTCACACAGCTACTT +
Preference number: 4 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTPTIST*SFTQLL
Trigger: AAGTAGCTGTGTGAAACTTCAGGTTGAAATGGTGGG...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTACAGTTTAAGGCATCATaGCGATACTCCCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELQFKAS*RYSLVK
Trigger: TTTCACCAGGGAGTATCGTCATGATGCCTTAAACTG...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCAACCCAGTTTTGGCGATaGGGAGCAAGCAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLATQFWR*GASSRI
Trigger: AATTCTGCTGCTTGCTCCTCATCGCCAAAACTGGGT...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAGGGACATCGGATCATaGCAAGGAGATGTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHRDIGS*QGDVPR
Trigger: TCTGGGAACATCTCCTTGTCATGATCCGATGTCCCT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp CATACCTTTCAATCTAAGTCTTTATGTTCATTCTGCATTCCTGCCACAAAAGTCTTGGGAAAGCCGGCCTaGCGACCCACATGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: HTFQSKSLCSFCIPATKVLGKPA*RPTCLL
Trigger: TAAAAGACATGTGGGTCGTCAGGCCGGCTTTCCCAA...GACTTTTGTGGCAGGAATGCAGAATGAACATAAAGACTTAGATTGAAAGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513997.1
CDS-3UTR TCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCACCTTTCCTGGTTGGCTaGCAGAGATCATGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAPFLVG*QRSWKS
Trigger: ACTCTTCCATGATCTCTGTCAGCCAACCAGGAAAGG...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACGAGCCTGAGAGCGATTaGCACCGATTGTGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNEPESD*HRLCLE
Trigger: CTCTAGGCACAATCGGTGTCAATCGCTCTCAGGCTC...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ACTGACCTACCACAAAAATTGATCAGTTCTGTCTCTACAACACCAAATTTCCTTCATGATGCCTGGGGCTaGGACTCTAGTCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: TDLPQKLISSVSTTPNFLHDAWG*DSSLDE
Trigger: TTCATCCAGACTAGAGTCTCAGCCCCAGGCATCATG...AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTAAAATCTACCTAGGCTaGCAGGCTGTGGTTCTACCT +
Preference number: 4 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTKIYLG*QAVVLP
Trigger: AGGTAGAACCACAGCCTGTCAGCCTAGGTAGATTTT...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAGACAGAATTAGACATTaGGAGCAAGGAAGAGATGTT +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIDRIRH*EQGRDV
Trigger: AACATCTCTTCCTTGCTCTCAATGTCTAATTCTGTC...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTCTTTCCATTCTTGCTaGTGCCTGTGCCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHSFHSC*CLCLQP
Trigger: AGGTTGGAGGCACAGGCAGCAGCAAGAATGGAAAGA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCATCTTTCCATTCTTGCTaGTGCCTGTGCCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLASFHSC*CLCLQP
Trigger: AGGTTGGAGGCACAGGCAGCAGCAAGAATGGAAAGA...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTAGTTCAGGCCTTCGTCTaGAACTATCAGGAAATATGG +
Preference number: 4 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELVQAFV*NYQEIW
Trigger: CCATATTTCCTGATAGTTGCAGACGAAGGCCTGAAC...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACAGCCTTGGTCTCGTGTaGCTTTTTGCTCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSLGLV*LFALGP
Trigger: GGGCCCAAGAGCAAAAAGGCACACGAGACCAAGGCT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAACGATTCTGAACAGTTaGTGCCACTTGATTAACAAG +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFITILNS*CHLINK
Trigger: CTTGTTAATCAAGTGGCAGCAACTGTTCAGAATCGT...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp GCAATTGAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCGCACTGTCTACACGTTaGTCAAAAGATGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: AIENTRIEESMKLLNIAAALSTR*SKDEAQ
Trigger: TTGGGCTTCATCTTTTGAGCAACGTGTAGACAGTGC...GGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCGACTGTTACAGCCTTTaGACCTACATATTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCDCYSL*TYIFLP
Trigger: TGGCAGAAATATGTAGGTGCAAAGGCTGTAACAGTC...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACGCAGCCAGTCTTTTATaGATCCGGCGGGAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNAASLL*IRREFR
Trigger: CCGAAACTCCCGCCGGATGCATAAAAGACTGGCTGC...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTATGTCCTCAGCCCAATaGGAAGTGATGACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTMSSAQ*EVMTLA
Trigger: TGCTAGAGTCATCACTTCCCATTGGGCTGAGGACAT...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCTGTTCTCAGAGGAAATaGCTGTCCAACCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTCSQRK*LSNLKV
Trigger: GACTTTGAGGTTGGACAGCCATTTCCTCTGAGAACA...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCCAATTATTTCAGCCTTaGTCTCGTGTGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCQLFQP*SRVPFC
Trigger: GCAAAAAGGCACACGAGACCAAGGCTGAAATAATTG...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp CCTTTCAATCTAAGTCTTTATGTTCATTCTGCATTCCTGCCACAAAAGTCTAGACTTGCAAGTAGTCTTTaGGAAAGCCGGCCTGACGAC +
Preference number: 4 (lower is better)
Translates to: PFNLSLYVHSAFLPQKSRLASSL*ESRPDD
Trigger: GTCGTCAGGCCGGCTTTCCCAAAGACTACTTGCAAG...TCTAGACTTTTGTGGCAGGAATGCAGAATGAACATAAAGACTTAGATTGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513997.1
CDS-3UTR CCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGCTTGCAAGTAGTCTTTaGGAAAGCCGGCCTGACGAC +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQLASSL*ESRPDD
Trigger: GTCGTCAGGCCGGCTTTCCCAAAGACTACTTGCAAG...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATATTGTTAGCCATGACATaGGCTTCTTTATCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFILLAMT*ASLSAL
Trigger: CAAAGCTGATAAAGAAGCCCATGTCATGGCTAACAA...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp GAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCTGTCAGGACATACACTGCTTGTaGCAATTGAGAATACCAGGA +
Preference number: 4 (lower is better)
Translates to: ENTRIEESMKLLNIAACQDIHCL*QLRIPG
Trigger: TCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTC...CTGACAGGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCACAGCTTCCAAGTCTGTaGAGTTTCTTGGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAQLPSL*SFLGCS
Trigger: AGAGCAGCCCAAGAAACTCCACAGACTTGGAAGCTG...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAAGATGGGTCAGTTCATaGAAAGGAAGAGGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIRWVSS*KGRGRK
Trigger: TTTTCTACCTCTTCCTTTCCATGAACTGACCCATCT...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CAA 72 bp ATAGAGCACAAGTCTAACTTTATACGATTGTTTTACTaGCAAGTAGTCTTTGGGAAAGCCGGCCTGACGACC +
Preference number: 4 (lower is better)
Translates to: IEHKSNFIRLFY*QVVFGKAGLTT
Trigger: GGTCGTCAGGCCGGCTTTCCCAAAGACTACTTGCAAGTAAAACAATCGTATAAAGTTAGACTTGTGCTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CAA 72 bp CCTCTCTCCATAGAGCACAAGTCTAACTTTATACGATaGTTTTACTTGCAAGTAGTCTTTGGGAAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PLSIEHKSNFIR*FYLQVVFGKAG
Trigger: GCCGGCTTTCCCAAAGACTACTTGCAAGTAAAACAATCGTATAAAGTTAGACTTGTGCTCTATGGAGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
3UTR CAA 72 bp CAATTCAAATGTGTGCAAGATCATTTGTTGACTGGATaGGAGAGTGGTGAACCTCAAGGCTCTCAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QFKCVQDHLLTG*ESGEPQGSQVQ
Trigger: TTGGACTTGAGAGCCTTGAGGTTCACCACTCTCCAATCCAGTCAACAAATGATCTTGCACACATTTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTCACTCAGGGGTTTATaGGAATGCCAGTGCACAAGT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHSLRGL*ECQCTS
Trigger: ACTTGTGCACTGGCATTCTCATAAACCCCTGAGTGA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATATGGCCCAATGCCAACTaGATATTTATTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIWPNAN*IFIPFL
Trigger: AAGAAAAGGAATAAATATTCAGTTGGCATTGGGCCA...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATACAGTTGCTGCCACTTaGTTAACAAGGGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHTVAAT*LTRAFV
Trigger: CACAAAGGCCCTTGTTAATCAAGTGGCAGCAACTGT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGACGATACTCCCTGGTaGAAACACCACAGAGAACTT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHDDTPW*KHHREL
Trigger: AAGTTCTCTGTGGTGTTTTCACCAGGGAGTATCGTC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTGGGAAAGCCGGCCTaGCGACCCACATGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLGKPA*RPTCLL
Trigger: TAAAAGACATGTGGGTCGTCAGGCCGGCTTTCCCAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTTGGGAAAGCCGGCCTaGCGACCCACATGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYLGKPA*RPTCLL
Trigger: TAAAAGACATGTGGGTCGTCAGGCCGGCTTTCCCAA...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTCAGGACTAAGATTCTaGAGTACCATTCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHSGLRF*STILAC
Trigger: GCAGGCCAGAATGGTACTTCAGAATCTTAGTCCTGA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCATCAGGACTAAGATTCTaGAGTACCATTCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLASGLRF*STILAC
Trigger: GCAGGCCAGAATGGTACTTCAGAATCTTAGTCCTGA...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACAACAGCACTGGAGCCTaGGAGCGATTGACACCGATT +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYNSTGA*ERLTPI
Trigger: AATCGGTGTCAATCGCTCTCAGGCTCCAGTGCTGTT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR TCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGCTGGCTTTGGAGATaGAAGGGAGCCACAAGCCAA +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYCWLWR*KGATSQ
Trigger: TTGGCTTGTGGCTCCCTTTCATCTCCAAAGCCAGCA...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp ATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTAAGAATGGGGTACCCACATGCAATTCTTCTCCATaGCTATTACCAAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: MQLSNSRWSMKPKNGVPTCNSSP*LLPRES
Trigger: AGACTCTCTTGGTAATAGTCATGGAGAAGAATTGCA...TGTGGGTACCCCATTCTTAGGCTTCATTGACCATCTACTGTTGCTTAGTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTTCCATTCTTGCTGCTaGCTGTGCCTCCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQFHSCC*LCLQPE
Trigger: TTCAGGTTGGAGGCACAGGCAGCAGCAAGAATGGAA...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTGTTCAGGCCTTCGTCTaGAACTATCAGGAAATATGG +
Preference number: 4 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGVQAFV*NYQEIW
Trigger: CCATATTTCCTGATAGTTGCAGACGAAGGCCTGAAC...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCAAATCTTCCATCTCCTaGAGGGTTAAGCAATTACTG +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCKSSIS*RVKQLL
Trigger: CAGTAATTGCTTAACCCTGCAGGAGATGGAAGATTT...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATCATCATACAGCTGGATaGTTTCTCGAGGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDHHTAG*FLEVKG
Trigger: CCCTTTCACCTCGAGAAAGCATCCAGCTGTATGATG...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCGAAGCTTTTGAATATTaGTGCCTGTCAGTGCATGAT +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCEAFEY*CLSVHD
Trigger: ATCATGCACTGACAGGCAGCAATATTCAAAAGCTTC...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp ACCTTGTTTCCACTAGAGTTCCAGTTATTTTCGAGTGTCATCACTGACCTACCATGGAGTTTCTTGGGCTaGTCTGGAGATAATAACTTC +
Preference number: 4 (lower is better)
Translates to: TLFPLEFQLFSSVITDLPWSFLG*SGDNNF
Trigger: GAAGTTATTATCTCCAGAGCAGCCCAAGAAACTCCA...TGGTAGGTCAGTGATGACACTCGAAAATAACTGGAACTCTAGTGGAAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp ATCGTGTCCCATGTCTTTGACATACACTGCTTGTGGCAATTGAGAATACCAGGATCACTCATTTTCACCTaGATGACTGTTACAGCCTTT +
Preference number: 4 (lower is better)
Translates to: IVSHVFDIHCLWQLRIPGSLIFT*MTVTAF
Trigger: AAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGA...TCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAAGACATGGGACACGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCCAGCCTTTTATTATTTaGCCCTACCTTGTTTCCACT +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCQPFII*PYLVST
Trigger: AGTGGAAACAAGGTAGGGGCAAATAATAAAAGGCTG...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCGGTAGAAATTCTAACTaGAGGAATCAAGGAAAGATT +
Preference number: 4 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFGRNSN*RNQGKI
Trigger: AATCTTTCCTTGATTCCTGCAGTTAGAATTTCTACC...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCCCTGGCCCTAAAATTTaGAGAGCATGTGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFPGPKI*RACGKA
Trigger: AGCTTTGCCACATGCTCTGCAAATTTTAGGGCCAGG...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTGTGTCTGTACATGCTTaGAAGAAGGTATGCATAAAG +
Preference number: 4 (lower is better)
Translates to: NSSHSPSLLVVDATAALSVSVHA*KKVCIK
Trigger: CTTTATGCATACCTTCTTCCAAGCATGTACAGACAC...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATATGTCCTCAGCCCAATaGGAAGTGATGACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHMSSAQ*EVMTLA
Trigger: TGCTAGAGTCATCACTTCCCATTGGGCTGAGGACAT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCTTGCAAGTAGTCTTTaGGAAAGCCGGCCTGACGAC +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLASSL*ESRPDD
Trigger: GTCGTCAGGCCGGCTTTCCCAAAGACTACTTGCAAG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTGTTAGCCATGACATaGGCTTCTTTATCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCLLAMT*ASLSAL
Trigger: CAAAGCTGATAAAGAAGCCCATGTCATGGCTAACAA...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp CCTTCACTCATTTTCACCTGCATGACTGTTACAGCCTTTGCACCTACATATTTCGCTGAGACTCTAGTCTaGATGAAACTTCATCTCAAC +
Preference number: 4 (lower is better)
Translates to: PSLIFTCMTVTAFAPTYFAETLV*MKLHLN
Trigger: GTTGAGATGAAGTTTCATCCAGACTAGAGTCTCAGC...GAAATATGTAGGTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCCTTGCTTTATGGGAATaGATGCAGATGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFLALWE*MQMEEA
Trigger: GGCCTCTTCCATCTGCATCCATTCCCATAAAGCAAG...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTAGTAGAAAAACCACAGTaGGACAATGCAGTTTACACA +
Preference number: 4 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELVEKPQ*DNAVYT
Trigger: TGTGTAAACTGCATTGTCTCACTGTGGTTTTTCTAC...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGCTAGCACAAGCTCTTTaGGAAAGAGGCAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQLAQAL*ERGRWS
Trigger: ACTCCATCTGCCTCTTTCTCAAAGAGCTTGTGCTAG...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCATCAACCACAAAAGATaGCGTTGGAATAAAACCCAA +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCINHKR*RWNKTQ
Trigger: TTGGGTTTTATTCCAACGTCATCTTTTGTGGTTGAT...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCAGTTTAAGGCATCATaGCGATACTCCCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHQFKAS*RYSLVK
Trigger: TTTCACCAGGGAGTATCGTCATGATGCCTTAAACTG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACACCCAGTTTTGGCGATaGGGAGCAAGCAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNTQFWR*GASSRI
Trigger: AATTCTGCTGCTTGCTCCTCATCGCCAAAACTGGGT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCCTTTCCTGGTTGGCTaGCAGAGATCATGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNPFLVG*QRSWKS
Trigger: ACTCTTCCATGATCTCTGTCAGCCAACCAGGAAAGG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCATCAAGGAACACCTTTaGTTGATAAAACTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCIKEHL*LIKLEV
Trigger: CACTTCGAGTTTTATCAATCAAAGGTGTTCCTTGAT...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp GCAATTGAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCATTTGTGAGTATTCATaGCAGAACATGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: AIENTRIEESMKLLNIAAICEYS*QNMAGL
Trigger: CAAACCTGCCATGTTCTGTCATGAATACTCACAAAT...GGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTAACGTTGCTCAAAAGATaGAGCCCAAACTTCTTAATG +
Preference number: 4 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELTLLKR*SPNFLM
Trigger: CATTAAGAAGTTTGGGCTTCATCTTTTGAGCAACGT...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCATCATTTTCACCTGCATaGCTGTTACAGCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLASFSPA*LLQPLH
Trigger: GTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGA...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp AATACAACACGTGTTGAACAGACATTCTGCAGAGCCTTTGGGGAGTTGAAATGCACATTTCCTCCTGATTaGTATCTCCCAGATATAATG +
Preference number: 4 (lower is better)
Translates to: NTTRVEQTFCRAFGELKCTFPPD*YLPDIM
Trigger: CATTATATCTGGGAGATATCAATCAGGAGGAAATGT...GCATTTCAACTCCCCAAAGGCTCTGCAGAATGTCTGTTCAACACGTGTTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCCTGAACATTTCCTCCTaGTTGATATCTCCCAGATAT +
Preference number: 4 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTLNISS*LISPRY
Trigger: ATATCTGGGAGATATCAATCAGGAGGAAATGTTCAG...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp ACTGACCTACCACAAAAATTGATCAGTTCTGTCTCTACAACACCAAATTTCCTTACAGTACAGCTGGACTaGTCAAGGGCTGAAAACTGT +
Preference number: 4 (lower is better)
Translates to: TDLPQKLISSVSTTPNFLTVQLD*SRAENC
Trigger: ACAGTTTTCAGCCCTTGATCAGTCCAGCTGTACTGT...AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTCCATTCTTGCTGCTaGCTGTGCCTCCAACCTGAA +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNFHSCC*LCLQPE
Trigger: TTCAGGTTGGAGGCACAGGCAGCAGCAAGAATGGAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGTTCAGGCCTTCGTCTaGAACTATCAGGAAATATGG +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHVQAFV*NYQEIW
Trigger: CCATATTTCCTGATAGTTGCAGACGAAGGCCTGAAC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATACCGAGCTGGCCCAATaGCAACTGAATATTTATTCC +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDTELAQ*QLNIYS
Trigger: GGAATAAATATTCAGTTGGCATTGGGCCAGCTCGGT...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTAGGCCTTTTTGTCTCCTaGTTTTTCTTTAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELGLFVS*FFFRKV
Trigger: CACTTTCCTAAAGAAAAAGCAGGAGACAAAAAGGCC...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTCCATGACTCTGGGTTaGTTGAAGGACAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHSMTLG*LKDSNE
Trigger: TTCATTGCTGTCCTTCAAGCAACCCAGAGTCATGGA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCTTTGGGGAGTTGAAATaGATAGCACAGAAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTFGELK*IAQKKL
Trigger: AAGCTTCTTCTGTGCTATGCATTTCAACTCCCCAAA...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp GAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCTGTCAGAAAGCAGTTTCCTTCTaGTCCCAAAAGTTTTACTCT +
Preference number: 4 (lower is better)
Translates to: ENTRIEESMKLLNIAACQKAVSF*SQKFYS
Trigger: AGAGTAAAACTTTTGGGAGCAGAAGGAAACTGCTTT...CTGACAGGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp ACCTTGTTTCCACTAGAGTTCCAGTTATTTTCGAGTGTCATCACTGACCTACCAGAATTATGGCTGCAGTaGGAATTAAAGTTGCGAATC +
Preference number: 4 (lower is better)
Translates to: TLFPLEFQLFSSVITDLPELWLQ*ELKLRI
Trigger: GATTCGCAACTTTAATTCGCACTGCAGCCATAATTC...TGGTAGGTCAGTGATGACACTCGAAAATAACTGGAACTCTAGTGGAAACAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp ATCGTGTCCCATGTCTTTGACATACACTGCTTGTGGCAATTGAGAATACCAGGATTCTCCCTTCAAAAGTaGAACGCAAATTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: IVSHVFDIHCLWQLRIPGFSLQK*NANSFS
Trigger: AGAAAAGGAATTTGCGTTGCACTTTTGAAGGGAGAA...TCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAAGACATGGGACACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp CATACCTTTCAATCTAAGTCTTTATGTTCATTCTGCATTCCTGCCACAAAAGTCCAACAGCATGACCTTTaGAGAAGTCATCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HTFQSKSLCSFCIPATKVQQHDL*RSHLGS
Trigger: TGACCCCAGATGACTTCTGCAAAGGTCATGCTGTTG...GACTTTTGTGGCAGGAATGCAGAATGAACATAAAGACTTAGATTGAAAGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513997.1
CDS-3UTR CCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGCCTCCAACCTGAACTaGCAAGTATTAAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHASNLN*QVLKVA
Trigger: TGCTACCTTTAATACTTGCCAGTTCAGGTTGGAGGC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAATGTCAGATCCTTCTaGCCAGACTTGTGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHNVRSF*PDLCKQ
Trigger: CTGCTTACACAAGTCTGGCCAGAAGGATCTGACATT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGTTTTGAGCCTTTCCTaGTTGGCTGACAGAGATCAT +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDVLSLS*LADRDH
Trigger: ATGATCTCTGTCAGCCAACCAGGAAAGGCTCAAAAC...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp GAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCTGTCAGTTCATCCTGTTATCCTaGACTAATCCTATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: ENTRIEESMKLLNIAACQFILLS*TNPIKE
Trigger: TTCCTTGATAGGATTAGTCCAGGATAACAGGATGAA...CTGACAGGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCAATGAACAGTACAGCTaGACTGATCAAGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSNEQYS*TDQGLK
Trigger: TTTCAGCCCTTGATCAGTCCAGCTGTACTGTTCATT...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGGAAGTTCAGGGAAGTTaGAATACGCATACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQEVQGS*NTHTRH
Trigger: ATGCCGAGTATGCGTATTTCAACTTCCCTGAACTTC...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGATCAGATTCTTGCCCTaGGGAAAGTACAACGTTGAC +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQIRFLP*GKYNVD
Trigger: GTCAACGTTGTACTTTCCTCAGGGCAAGAATCTGAT...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCTAGCACAAGCTCTTTaGGAAAGAGGCAGATGGAGT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLAQAL*ERGRWS
Trigger: ACTCCATCTGCCTCTTTCTCAAAGAGCTTGTGCTAG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGTCTCTGACCAACTTTaGTACGGTATTCCAGAGATA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHVSDQL*YGIPEI
Trigger: TATCTCTGGAATACCGTATCAAAGTTGGTCAGAGAC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCAACCTCAAAGTCTCTaGCCAACTTTGATACGGTAT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHQPQSL*PTLIRY
Trigger: ATACCGTATCAAAGTTGGTCAGAGACTTTGAGGTTG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCACAACCTCAAAGTCTCTaGCCAACTTTGATACGGTAT +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAQPQSL*PTLIRY
Trigger: ATACCGTATCAAAGTTGGTCAGAGACTTTGAGGTTG...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTAGCTGTCTTTGATTGGTaGTGGTTTCTTTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELAVFDW*WFLFKK
Trigger: TTTCTTGAAAAGAAACCATCACCAATCAAAGACAGC...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACGACGATACTCCCTGGTaGAAACACCACAGAGAACTT +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYDDTPW*KHHREL
Trigger: AAGTTCTCTGTGGTGTTTTCACCAGGGAGTATCGTC...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATATTGTAGCCACTCGGTaGGATGTTCAGGATTACTTA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHIVATR*DVQDYL
Trigger: TAAGTAATCCTGAACATCTCACCGAGTGGCTACAAT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCATTGTAGCCACTCGGTaGGATGTTCAGGATTACTTA +
Preference number: 4 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFIVATR*DVQDYL
Trigger: TAAGTAATCCTGAACATCTCACCGAGTGGCTACAAT...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACGTGTCCACTGCTTTTTaGTCAGCATATGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNVSTAF*SAYVQS
Trigger: GGACTGCACATATGCTGATCAAAAAGCAGTGGACAC...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCATTGAGAAAAATGTTTTaGGCCTTTCCTGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLALRKMF*AFPGWL
Trigger: CAGCCAACCAGGAAAGGCTCAAAACATTTTTCTCAA...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ACTGACCTACCACAAAAATTGATCAGTTCTGTCTCTACAACACCAAATTTCCTTAATAGGAGGCCAATATaGAAGATCAGAGTCAGACGG +
Preference number: 4 (lower is better)
Translates to: TDLPQKLISSVSTTPNFLNRRPI*KIRVRR
Trigger: CCGTCTGACTCTGATCTTTCATATTGGCCTCCTATT...AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp ACCTTGTTTCCACTAGAGTTCCAGTTATTTTCGAGTGTCATCACTGACCTACCAGAATGTGTGAATGATTaGTTGATTGATTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: TLFPLEFQLFSSVITDLPECVND*LIDFLA
Trigger: GGCAAGGAAATCAATCAATCAATCATTCACACATTC...TGGTAGGTCAGTGATGACACTCGAAAATAACTGGAACTCTAGTGGAAACAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp ACCTTGTTTCCACTAGAGTTCCAGTTATTTTCGAGTGTCATCACTGACCTACCACACCAAATTTCCTTCTaGGTTACAGACTTATCATTG +
Preference number: 4 (lower is better)
Translates to: TLFPLEFQLFSSVITDLPHQISF*VTDLSL
Trigger: CAATGATAAGTCTGTAACTCAGAAGGAAATTTGGTG...TGGTAGGTCAGTGATGACACTCGAAAATAACTGGAACTCTAGTGGAAACAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCATTACCAAGAGAGTCTaGAAAGCCATCAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSITKRV*KAIKFH
Trigger: GTGGAATTTGATGGCTTTTCAGACTCTCTTGGTAAT...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAGAACATCAGATTCTTaGCCTGAGGAAAGTACAACG +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHRTSDS*PEESTT
Trigger: CGTTGTACTTTCCTCAGGGCAAGAATCTGATGTTCT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTCTGGTGTCTGTACATaGTTGGAAGAAGGTATGCAT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHSGVCT*LEEGMH
Trigger: ATGCATACCTTCTTCCAAGCATGTACAGACACCAGA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TTCAATCTAAGTCTTTATGTTCATTCTGCATTCCTGCCACAAAAGTCTAGACATCATCATACAGCTGGATaGTTTCTCGAGGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: FNLSLYVHSAFLPQKSRHHHTAG*FLEVKG
Trigger: CCCTTTCACCTCGAGAAAGCATCCAGCTGTATGATG...ATGTCTAGACTTTTGTGGCAGGAATGCAGAATGAACATAAAGACTTAGATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513997.1
CDS-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCATCATACAGCTGGATaGTTTCTCGAGGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNHHTAG*FLEVKG
Trigger: CCCTTTCACCTCGAGAAAGCATCCAGCTGTATGATG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTTTGATCAGCATATGTaGAGTCCTGTGGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHFDQHM*SPVGFP
Trigger: TGGAAATCCCACAGGACTGCACATATGCTGATCAAA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATTTTGATCAGCATATGTaGAGTCCTGTGGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDFDQHM*SPVGFP
Trigger: TGGAAATCCCACAGGACTGCACATATGCTGATCAAA...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCAGTCTCAGTGTCCACTaGTTTTTGATCAGCATATGT +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSSLSVH*FLISIC
Trigger: ACATATGCTGATCAAAAAGCAGTGGACACTGAGACT...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTCCATGACTCTGGGTTaGTTGAAGGACAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQSMTLG*LKDSNE
Trigger: TTCATTGCTGTCCTTCAAGCAACCCAGAGTCATGGA...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp CCTTCACTCATTTTCACCTGCATGACTGTTACAGCCTTTGCACCTACATATTTCGTCTTTGACATACACTaGTTGTGGCAATTGAGAATA +
Preference number: 4 (lower is better)
Translates to: PSLIFTCMTVTAFAPTYFVFDIH*LWQLRI
Trigger: TATTCTCAATTGCCACAAGCAGTGTATGTCAAAGAC...GAAATATGTAGGTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCGTGTCTGTACATGCTTaGAAGAAGGTATGCATAAAG +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSVSVHA*KKVCIK
Trigger: CTTTATGCATACCTTCTTCCAAGCATGTACAGACAC...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACATGTCCTCAGCCCAATaGGAAGTGATGACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYMSSAQ*EVMTLA
Trigger: TGCTAGAGTCATCACTTCCCATTGGGCTGAGGACAT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCCATCAAACTGACACCTaGACCTGTCATAATCATCAC +
Preference number: 4 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFHQTDT*TCHNHH
Trigger: GTGATGATTATGACAGGTCCAGGTGTCAGTTTGATG...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp TACCTGCCAGGTAATGTGCTAAGCACTAAAGACACAAGAAGAAAAATACACGGTTCATTTTCTGCATCCTaGGCTGGATGTAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: YLPGNVLSTKDTRRKIHGSFSAS*AGCKEL
Trigger: AAGTTCTTTACATCCAGCCCAGGATGCAGAAAATGA...ACCGTGTATTTTTCTTCTTGTGTCTTTAGTGCTTAGCACATTACCTGGCAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTCTGAAGTACCATTCTaGCCTGCTCTACGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSEVPF*PALRCH
Trigger: ATGGCAACGTAGAGCAGGCCAGAATGGTACTTCAGA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTCTGAAGTACCATTCTaGCCTGCTCTACGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYSEVPF*PALRCH
Trigger: ATGGCAACGTAGAGCAGGCCAGAATGGTACTTCAGA...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTATCGAAGTGTGCATCTTaGAACTTTGGTGGAAAATAT +
Preference number: 4 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELSKCAS*NFGGKY
Trigger: ATATTTTCCACCAAAGTTCCAAGATGCACACTTCGA...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp CCTTCACTCATTTTCACCTGCATGACTGTTACAGCCTTTGCACCTACATATTTCTCATATCAGCCAGTTTaGAAACAATTCGTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PSLIFTCMTVTAFAPTYFSYQPV*KQFVGK
Trigger: CTTTCCTACGAATTGTTTCCAAACTGGCTGATATGA...GAAATATGTAGGTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCAGTGCCTAGAGTAACATaGTTTGGAGTTTCTAGTCGA +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAVPRVT*FGVSSR
Trigger: TCGACTAGAAACTCCAAACCATGTTACTCTAGGCAC...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR CCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGAAGGCTTTAGAAAGATaGACATTTAGGCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQKALER*TFRPGA
Trigger: CGCTCCTGGCCTAAATGTCCATCTTTCTAAAGCCTT...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp ACCTTGTTTCCACTAGAGTTCCAGTTATTTTCGAGTGTCATCACTGACCTACCAATAGGTCAGGTTACATaGCAAAGGGGAATGAATTAT +
Preference number: 4 (lower is better)
Translates to: TLFPLEFQLFSSVITDLPIGQVT*QRGMNY
Trigger: ATAATTCATTCCCCTTTGCCATGTAACCTGACCTAT...TGGTAGGTCAGTGATGACACTCGAAAATAACTGGAACTCTAGTGGAAACAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCATAGGTCAGGTTACATaGCAAAGGGGAATGAATTAT +
Preference number: 4 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTIGQVT*QRGMNY
Trigger: ATAATTCATTCCCCTTTGCCATGTAACCTGACCTAT...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
3UTR CAA 72 bp AAGTTTTTGAGACAGCTTCCAAGTCTGTGGAGTTTCTaGGGCTGCTCTGGAGATAATAACTTCAGTAACTAT +
Preference number: 4 (lower is better)
Translates to: KFLRQLPSLWSF*GCSGDNNFSNY
Trigger: ATAGTTACTGAAGTTATTATCTCCAGAGCAGCCCAAGAAACTCCACAGACTTGGAAGCTGTCTCAAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
3UTR CAA 72 bp ATTATTTCAGCCTTGGTCTCGTGTGCCTTTTTGCTCTaGGGCCCACTAAAATCCTTCTTTGACTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: IISALVSCAFLL*GPLKSFFDLIV
Trigger: AACTATTAAGTCAAAGAAGGATTTTAGTGGGCCCAAGAGCAAAAAGGCACACGAGACCAAGGCTGAAATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACGAAGTTCAGGGAAGTTaGAATACGCATACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNEVQGS*NTHTRH
Trigger: ATGCCGAGTATGCGTATTTCAACTTCCCTGAACTTC...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACAGGAAAGTACAACGTTaGCCTTCCTTGCCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNRKVQR*PSLPKN
Trigger: ATTCTTGGGCAAGGAAGGTCAACGTTGTACTTTCCT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACATCAGATTCTTGCCCTaGGGAAAGTACAACGTTGAC +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNIRFLP*GKYNVD
Trigger: GTCAACGTTGTACTTTCCTCAGGGCAAGAATCTGAT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGTAGAAAAACCACAGTaGGACAATGCAGTTTACACA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHVEKPQ*DNAVYT
Trigger: TGTGTAAACTGCATTGTCTCACTGTGGTTTTTCTAC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCATTGGAGCTGTCTTTaGTTGGTGATGGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHHWSCL*LVMVSF
Trigger: AAAAGAAACCATCACCAATCAAAGACAGCTCCAATG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCCATTGGAGCTGTCTTTaGTTGGTGATGGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFHWSCL*LVMVSF
Trigger: AAAAGAAACCATCACCAATCAAAGACAGCTCCAATG...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCAACCGTTGGAAAACATaGTACTTTTGCACAGATCTA +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSNRWKT*YFCTDL
Trigger: TAGATCTGTGCAAAAGTATCATGTTTTCCAACGGTT...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCCCACCATTTCAACCTaGAGTTTCACACAGCTACTT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNPTIST*SFTQLL
Trigger: AAGTAGCTGTGTGAAACTTCAGGTTGAAATGGTGGG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCTGGCCCAATGCCAACTaGATATTTATTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSWPNAN*IFIPFL
Trigger: AAGAAAAGGAATAAATATTCAGTTGGCATTGGGCCA...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGATTGTAGCCACTCGGTaGGATGTTCAGGATTACTTA +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQIVATR*DVQDYL
Trigger: TAAGTAATCCTGAACATCTCACCGAGTGGCTACAAT...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCCATACCTTTCAATATaGTCTGTTGTTAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHPYLSI*SVVSAA
Trigger: TGCTGCACTAACAACAGATCATATTGAAAGGTATGG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATATTTACAAGGCATGTTaGCACCTAAAGCAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHIYKAC*HLKQVF
Trigger: GAACACTTGCTTTAGGTGTCAACATGCCTTGTAAAT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCAATTTACAAGGCATGTTaGCACCTAAAGCAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAIYKAC*HLKQVF
Trigger: GAACACTTGCTTTAGGTGTCAACATGCCTTGTAAAT...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATATTTGTGAGTATTCATaGCAGAACATGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHICEYS*QNMAGL
Trigger: CAAACCTGCCATGTTCTGTCATGAATACTCACAAAT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCACACCTATAAAGTATTaGGTTGCATGCAGATTGAAG +
Preference number: 4 (lower is better)
Translates to: SFCVIYASVQCILKPTGSTPIKY*VACRLK
Trigger: CTTCAATCTGCATGCAACTCAATACTTTATAGGTGT...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR TCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCATGCAATTCTTCTCCATaGCTATTACCAAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLACNSSP*LLPRES
Trigger: AGACTCTCTTGGTAATAGTCATGGAGAAGAATTGCA...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR GCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTCTGGTGTCTGTACATaGTTGGAAGAAGGTATGCAT +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQSGVCT*LEEGMH
Trigger: ATGCATACCTTCTTCCAAGCATGTACAGACACCAGA...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAAATCTTCCATCTCCTaGAGGGTTAAGCAATTACTG +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHKSSIS*RVKQLL
Trigger: CAGTAATTGCTTAACCCTGCAGGAGATGGAAGATTT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCAAATCTTCCATCTCCTaGAGGGTTAAGCAATTACTG +
Preference number: 4 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFKSSIS*RVKQLL
Trigger: CAGTAATTGCTTAACCCTGCAGGAGATGGAAGATTT...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACACCGAGCTGGCCCAATaGCAACTGAATATTTATTCC +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNTELAQ*QLNIYS
Trigger: GGAATAAATATTCAGTTGGCATTGGGCCAGCTCGGT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTTCTGGACTCAAATCTaGTTCAGGACTAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHFWTQI*FRTKIL
Trigger: CAGAATCTTAGTCCTGAAGCAGATTTGAGTCCAGAA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCATTCTGGACTCAAATCTaGTTCAGGACTAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAFWTQI*FRTKIL
Trigger: CAGAATCTTAGTCCTGAAGCAGATTTGAGTCCAGAA...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTTTTCTTTAGGAAAGTaGTCACACTTTCAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHFSLGK*SHFQLR
Trigger: ACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCATTTTCTTTAGGAAAGTaGTCACACTTTCAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAFSLGK*SHFQLR
Trigger: ACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCGACCAAATACCTTCTaGAAAGTCTCAGTGTCCACT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNRPNTF*KVSVST
Trigger: AGTGGACACTGAGACTTTGCAGAAGGTATTTGGTCG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATATAAAACTCGAAGTGTaGATCTTGGAACTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDIKLEV*ILELWW
Trigger: CCACCAAAGTTCCAAGATGCACACTTCGAGTTTTAT...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCACAAACAGGCCGATTCTaGTCAGATCCAAGATATAAA +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAQTGRF*SDPRYK
Trigger: TTTATATCTTGGATCTGAGCAGAATCGGCCTGTTTG...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGAGTCATTCCCTTATCTaGCATCATAGCTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQSHSLI*HHSSDH
Trigger: ATGGTCAGAGCTATGATGGCAGATAAGGGAATGACT...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAATTATGGCTGCAGTaGGAATTAAAGTTGCGAATC +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDELWLQ*ELKLRI
Trigger: GATTCGCAACTTTAATTCGCACTGCAGCCATAATTC...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR CCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGTGTCTGTACATGCTTaGAAGAAGGTATGCATAAAG +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHVSVHA*KKVCIK
Trigger: CTTTATGCATACCTTCTTCCAAGCATGTACAGACAC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACAATGTCAGATCCTTCTaGCCAGACTTGTGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYNVRSF*PDLCKQ
Trigger: CTGCTTACACAAGTCTGGCCAGAAGGATCTGACATT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTGTTCTCAGAGGAAATaGCTGTCCAACCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNCSQRK*LSNLKV
Trigger: GACTTTGAGGTTGGACAGCCATTTCCTCTGAGAACA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCAGAGAACTTCACCACTTaGCAGATTTTTCGTAAAACG +
Preference number: 4 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAENFTT*QIFRKT
Trigger: CGTTTTACGAAAAATCTGCCAAGTGGTGAAGTTCTC...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACGTTTTGAGCCTTTCCTaGTTGGCTGACAGAGATCAT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNVLSLS*LADRDH
Trigger: ATGATCTCTGTCAGCCAACCAGGAAAGGCTCAAAAC...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCTGCCCAGGCTTAAATaGTATCTCACAGATACATGT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLPRLK*YLTDTC
Trigger: ACATGTATCTGTGAGATATCATTTAAGCCTGGGCAG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACCTGCCCAGGCTTAAATaGTATCTCACAGATACATGT +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYLPRLK*YLTDTC
Trigger: ACATGTATCTGTGAGATATCATTTAAGCCTGGGCAG...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGCTGTCTTTGATTGGTaGTGGTTTCTTTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHAVFDW*WFLFKK
Trigger: TTTCTTGAAAAGAAACCATCACCAATCAAAGACAGC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAACCGTTGGAAAACATaGTACTTTTGCACAGATCTA +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHNRWKT*YFCTDL
Trigger: TAGATCTGTGCAAAAGTATCATGTTTTCCAACGGTT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCAACCGTTGGAAAACATaGTACTTTTGCACAGATCTA +
Preference number: 4 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFNRWKT*YFCTDL
Trigger: TAGATCTGTGCAAAAGTATCATGTTTTCCAACGGTT...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR TCA 90 bp TTCAATCTAAGTCTTTATGTTCATTCTGCATTCCTGCCACAAAAGTCTAGACATATTGTAGCCACTCGGTaGGATGTTCAGGATTACTTA +
Preference number: 4 (lower is better)
Translates to: FNLSLYVHSAFLPQKSRHIVATR*DVQDYL
Trigger: TAAGTAATCCTGAACATCTCACCGAGTGGCTACAAT...ATGTCTAGACTTTTGTGGCAGGAATGCAGAATGAACATAAAGACTTAGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513997.1
CDS-3UTR TCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGCCATACCTTTCAATATaGTCTGTTGTTAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQPYLSI*SVVSAA
Trigger: TGCTGCACTAACAACAGATCATATTGAAAGGTATGG...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ACTGACCTACCACAAAAATTGATCAGTTCTGTCTCTACAACACCAAATTTCCTTACAGACTTATCATTGTaGCTACTGAACATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TDLPQKLISSVSTTPNFLTDLSL*LLNISS
Trigger: GGAGGAAATGTTCAGTAGTCACAATGATAAGTCTGT...AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGAAGAAATGGAGGTTCTaGCCAGGCTTAAATGATATC +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQKKWRF*PGLNDI
Trigger: GATATCATTTAAGCCTGGGCAGAACCTCCATTTCTT...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACAGAACATCAGATTCTTaGCCTGAGGAAAGTACAACG +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYRTSDS*PEESTT
Trigger: CGTTGTACTTTCCTCAGGGCAAGAATCTGATGTTCT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp AGAAAAAGAAAGATGGACATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTTTTGTAGAAATCCAGTaGATAGGCATTAAGCGACAT +
Preference number: 4 (lower is better)
Translates to: RKRKMDMQLSNSRWSMKPFVEIQ*IGIKRH
Trigger: ATGTCGCTTAATGCCTATGCACTGGATTTCTACAAA...AGGCTTCATTGACCATCTACTGTTGCTTAGTTGCATGTCCATCTTTCTTTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTTTGTAGAAATCCAGTaGATAGGCATTAAGCGACAT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHFVEIQ*IGIKRH
Trigger: ATGTCGCTTAATGCCTATGCACTGGATTTCTACAAA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATTTTGTAGAAATCCAGTaGATAGGCATTAAGCGACAT +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDFVEIQ*IGIKRH
Trigger: ATGTCGCTTAATGCCTATGCACTGGATTTCTACAAA...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR GCA 90 bp CCTTTCAATCTAAGTCTTTATGTTCATTCTGCATTCCTGCCACAAAAGTCTAGATTCATTCTGCATTCCTaGCACAAAAGTCTAGACATC +
Preference number: 4 (lower is better)
Translates to: PFNLSLYVHSAFLPQKSRFILHS*HKSLDI
Trigger: GATGTCTAGACTTTTGTGGCAGGAATGCAGAATGAA...TCTAGACTTTTGTGGCAGGAATGCAGAATGAACATAAAGACTTAGATTGAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513997.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCATCAAACTGACACCTaGACCTGTCATAATCATCAC +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNHQTDT*TCHNHH
Trigger: GTGATGATTATGACAGGTCCAGGTGTCAGTTTGATG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACCATCAAACTGACACCTaGACCTGTCATAATCATCAC +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYHQTDT*TCHNHH
Trigger: GTGATGATTATGACAGGTCCAGGTGTCAGTTTGATG...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCAATTATTTCAGCCTTaGTCTCGTGTGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNQLFQP*SRVPFC
Trigger: GCAAAAAGGCACACGAGACCAAGGCTGAAATAATTG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACGTGCCTAGAGTAACATaGTTTGGAGTTTCTAGTCGA +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYVPRVT*FGVSSR
Trigger: TCGACTAGAAACTCCAAACCATGTTACTCTAGGCAC...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR CCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATTTCATCCTGTTATCCTaGACTAATCCTATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDFILLS*TNPIKE
Trigger: TTCCTTGATAGGATTAGTCCAGGATAACAGGATGAA...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR TCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACCATTGGAGCTGTCTTTaGTTGGTGATGGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYHWSCL*LVMVSF
Trigger: AAAAGAAACCATCACCAATCAAAGACAGCTCCAATG...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACATGATAATGCAAATGTaGTACAAGTCCAGCAAACCC +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYMIMQM*YKSSKP
Trigger: GGGTTTGCTGGACTTGTATCACATTTGCATTATCAT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR TCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACATTACCAAGAGAGTCTaGAAAGCCATCAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYITKRV*KAIKFH
Trigger: GTGGAATTTGATGGCTTTTCAGACTCTCTTGGTAAT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACAAGAAATGGAGGTTCTaGCCAGGCTTAAATGATATC +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNKKWRF*PGLNDI
Trigger: GATATCATTTAAGCCTGGGCAGAACCTCCATTTCTT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAGATACAGTCTTGTGTaGCTCTTCCGTAATATTATT +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHRYSLV*LFRNII
Trigger: AATAATATTACGGAAGAGGCACACAAGACTGTATCT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATAGATACAGTCTTGTGTaGCTCTTCCGTAATATTATT +
Preference number: 4 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDRYSLV*LFRNII
Trigger: AATAATATTACGGAAGAGGCACACAAGACTGTATCT...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACACGATTCTGAACAGTTaGTGCCACTTGATTAACAAG +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNTILNS*CHLINK
Trigger: CTTGTTAATCAAGTGGCAGCAACTGTTCAGAATCGT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACACGATTCTGAACAGTTaGTGCCACTTGATTAACAAG +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYTILNS*CHLINK
Trigger: CTTGTTAATCAAGTGGCAGCAACTGTTCAGAATCGT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACGGCCTTTTTGTCTCCTaGTTTTTCTTTAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNGLFVS*FFFRKV
Trigger: CACTTTCCTAAAGAAAAAGCAGGAGACAAAAAGGCC...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACAGTCTCAGTGTCCACTaGTTTTTGATCAGCATATGT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSLSVH*FLISIC
Trigger: ACATATGCTGATCAAAAAGCAGTGGACACTGAGACT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR GCA 90 bp CCTTTCAATCTAAGTCTTTATGTTCATTCTGCATTCCTGCCACAAAAGTCTAGATCTTTATGTTCATTCTaGATTCCTGCCACAAAAGTC +
Preference number: 4 (lower is better)
Translates to: PFNLSLYVHSAFLPQKSRSLCSF*IPATKV
Trigger: GACTTTTGTGGCAGGAATGCAGAATGAACATAAAGA...TCTAGACTTTTGTGGCAGGAATGCAGAATGAACATAAAGACTTAGATTGAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513997.1
CDS-3UTR CCA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTTTGGTACCTCTAAGTaGCAGTTCTTAATGAAAATG +
Preference number: 4 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHFGTSK*QFLMKM
Trigger: CATTTTCATTAAGAACTGCCACTTAGAGGTACCAAA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCTTCGAACATCAATGGTaGTATTCTTCTGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFFEHQW*YSSEDE
Trigger: TTCATCTTCAGAAGAATACCACCATTGATGTTCGAA...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTCATTTTCTGCATCCTaGGCTGGATGTAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSFSAS*AGCKEL
Trigger: AAGTTCTTTACATCCAGCCCAGGATGCAGAAAATGA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTCATTTTCTGCATCCTaGGCTGGATGTAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYSFSAS*AGCKEL
Trigger: AAGTTCTTTACATCCAGCCCAGGATGCAGAAAATGA...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACGAGAACTTCACCACTTaGCAGATTTTTCGTAAAACG +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNENFTT*QIFRKT
Trigger: CGTTTTACGAAAAATCTGCCAAGTGGTGAAGTTCTC...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTGTTAGCCATGACATaGGCTTCTTTATCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLLAMT*ASLSAL
Trigger: CAAAGCTGATAAAGAAGCCCATGTCATGGCTAACAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTCATATCAGCCAGTTTaGAAACAATTCGTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FLYISLVESFCVIYASVQSYQPV*KQFVGK
Trigger: CTTTCCTACGAATTGTTTCCAAACTGGCTGATATGA...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR CCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACAAGGGGAATGAATTATaGCTGCAGTGCGAATTAAAG +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYKGNEL*LQCELK
Trigger: CTTTAATTCGCACTGCAGCCATAATTCATTCCCCTT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACATCAACCACAAAAGATaGCGTTGGAATAAAACCCAA +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNINHKR*RWNKTQ
Trigger: TTGGGTTTTATTCCAACGTCATCTTTTGTGGTTGAT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR TCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTGGCCCAATGCCAACTaGATATTTATTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNWPNAN*IFIPFL
Trigger: AAGAAAAGGAATAAATATTCAGTTGGCATTGGGCCA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTCATATCAGCCAGTTTaGAAACAATTCGTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSYQPV*KQFVGK
Trigger: CTTTCCTACGAATTGTTTCCAAACTGGCTGATATGA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTCATCCTGTTATCCTaGACTAATCCTATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNFILLS*TNPIKE
Trigger: TTCCTTGATAGGATTAGTCCAGGATAACAGGATGAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
3UTR CAA 72 bp TTATTTTCGAGTGTCATCACTGACCTACCACAAAAATaGATCAGTTCTGTCTCTACAACACCAAATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LFSSVITDLPQK*ISSVSTTPNFL
Trigger: AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGTGATGACACTCGAAAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CCA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTCGAACATCAATGGTaGTATTCTTCTGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNFEHQW*YSSEDE
Trigger: TTCATCTTCAGAAGAATACCACCATTGATGTTCGAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CCA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTTCGAACATCAATGGTaGTATTCTTCTGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYFEHQW*YSSEDE
Trigger: TTCATCTTCAGAAGAATACCACCATTGATGTTCGAA...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGACAGTCTTGTGTGCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWTVLCA*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGCACACAAGACTGT...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS TCA 90 bp GGGGCTGATAGCTCTCCAGGAGTCAGCAGCTGTTCCTGTGTGGCATaGAAATTGGGCCAAAAGCCAAAGACACTGTCCTTAGCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: GADSSPGVSSCSCVA*KLGQKPKTLSLARN
Trigger: GTTTCTGGCTAAGGACAGTGTCTTTGGCTTTTGGCCCAATTTTCATGCCACACAGGAACAGCTGCTGACTCCTGGAGAGCTATCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679744.1
CDS-3UTR CAA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGCAGCTACTCAGGAGATaGAGGCAGGAGAACTGCTTG +
Preference number: 5 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGEQLLRR*RQENCL
Trigger: CAAGCAGTTCTCCTGCCTCAATCTCCTGAGTAGCTG...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGGTCTCGTGTGCCTTTTaGCTCTTGGGCCCACTAAAA +
Preference number: 5 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWVSCAF*LLGPLK
Trigger: TTTTAGTGGGCCCAAGAGCAAAAAGGCACACGAGAC...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCAGCAGAAGCCACATTCTaGCTTTTCTTCACCTTCCCT +
Preference number: 5 (lower is better)
Translates to: SGENALTMEGPGPKICRAAEATF*LFFTFP
Trigger: AGGGAAGGTGAAGAAAAGCAAGAATGTGGCTTCTGC...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTAGCAGAGATACAGTCTaGTGTGCCTTGGCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLSRDTV*CALASQ
Trigger: TTGGGAGGCCAAGGCACACAAGACTGTATCTCTGCT...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAACTGACAGAGGCCTCTaGGAGATGCCTGGGTGGTTA +
Preference number: 5 (lower is better)
Translates to: EARVGLSKGSPHPHFIFITDRGL*EMPGWL
Trigger: TAACCACCCAGGCATCTCCAAGAGGCCTCTGTCAGT...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp AAAAAGGGAGCAATCAGGAAGGAGGGCACTCAAGGCAGATGGGTCAGTTCATGGTTGGGCACCATTTCATaGGAGCTGTCTTTGATTGGT +
Preference number: 5 (lower is better)
Translates to: KKGAIRKEGTQGRWVSSWLGTIS*ELSLIG
Trigger: ACCAATCAAAGACAGCTCCAATGAAATGGTGCCCAA...CCATGAACTGACCCATCTGCCTTGAGTGCCCTCCTTCCTGATTGCTCCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCACAAATACCCTTTATTTaGGTACCTCTAAGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: SGENALTMEGPGPKICRAQIPFI*VPLSGS
Trigger: ACTGCCACTTAGAGGTACCAAAATAAAGGGTATTTG...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp TCAGGGGAGAACGCTCTGACTATGGAAGGGCCTGGCCCTAAAATTTGCAGAGCATCATTGGAGCTGTCTTaGATTGGTGATGGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: SGENALTMEGPGPKICRASLELS*IGDGFF
Trigger: AAAGAAACCATCACCAATCAAAGACAGCTCCAATGA...TGCTCTGCAAATTTTAGGGCCAGGCCCTTCCATAGTCAGAGCGTTCTCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp AGAAAAAGAAAGATGGACATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTTGTAACCGCAGCACTTaGGGAGGGCAAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RKRKMDMQLSNSRWSMKPCNRST*GGQGRQ
Trigger: CTGCCTGCCTTGCCCTCCCAAAGTGCTGCGGTTACA...AGGCTTCATTGACCATCTACTGTTGCTTAGTTGCATGTCCATCTTTCTTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCGAACCATTGCTGGCTTaGGAGATGAAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCEPLLA*EMKGSH
Trigger: GTGGCTCCCTTTCATCTCCAAAGCCAGCAATGGTTC...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS TCA 90 bp ACCATGGTTGGATTCAGATCAGCTCACTGGTCCTGCCCCCACTCCTaGAATCATTTTTATACTACAACTATAGAGGAAAGGACCCAGGTG +
Preference number: 5 (lower is better)
Translates to: TMVGFRSAHWSCPHS*NHFYTTTIEERTQV
Trigger: CACCTGGGTCCTTTCCTCTATAGTTGTAGTATAAAAATGATTTCAGGAGTGGGGGCAGGACCAGTGAGCTGATCTGAATCCAACCATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679744.1
CDS-3UTR CAA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCCATTTCTTTCCATTCTaGCTGCTGCCTGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCHFFPF*LLPVPP
Trigger: TGGAGGCACAGGCAGCAGCAAGAATGGAAAGAAATG...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTAGAAGTTCAGGGAAGTaGAAATACGCATACTCGGCA +
Preference number: 5 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLRSSGK*KYAYSA
Trigger: TGCCGAGTATGCGTATTTCAACTTCCCTGAACTTCT...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATATCTAGCACAAGCTCTTaGAGAAAGAGGCAGATGGAG +
Preference number: 5 (lower is better)
Translates to: EARVGLSKGSPHPHFIFISSTSS*RKRQME
Trigger: CTCCATCTGCCTCTTTCTCAAAGAGCTTGTGCTAGA...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTGCAATTATTTCAGCCTaGGTCTCGTGTGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLAIISA*VSCAFL
Trigger: CAAAAAGGCACACGAGACCAAGGCTGAAATAATTGC...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTCTGGCCTGCTCTACGTaGCCATTTTTAATCCAACTT +
Preference number: 5 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLLACST*PFLIQL
Trigger: AAGTTGGATTAAAAATGGCAACGTAGAGCAGGCCAG...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp GGAGATGAAAGGGAGCCACAAGCCAAGGAATGCCGGCAGCCTCTAAAAGTTGGATTCATATCAGCCAGTTaGGAAACAATTCGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: GDEREPQAKECRQPLKVGFISAS*ETIRRK
Trigger: TTTCCTACGAATTGTTTCCAAACTGGCTGATATGAA...TCCAACTTTTAGAGGCTGCCGGCATTCCTTGGCTTGTGGCTCCCTTTCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp ATCGTGTCCCATGTCTTTGACATACACTGCTTGTGGCAATTGAGAATACCAGGACACTGCTTGTGGCAATaGAGAATACCAGGATCGAGG +
Preference number: 5 (lower is better)
Translates to: IVSHVFDIHCLWQLRIPGHCLWQ*RIPGSR
Trigger: CCTCGATCCTGGTATTCTCAATTGCCACAAGCAGTG...TCCTGGTATTCTCAATTGCCACAAGCAGTGTATGTCAAAGACATGGGACACGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp GCAATTGAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCAGGCAGGAGAATTGCTaGAACCTGGGAGGTGAGGTT +
Preference number: 5 (lower is better)
Translates to: AIENTRIEESMKLLNIAARQENC*NLGGEV
Trigger: AACCTCACCTCCCAGGTTCAAGCAATTCTCCTGCCT...GGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp GGAGATGAAAGGGAGCCACAAGCCAAGGAATGCCGGCAGCCTCTAAAAGTTGGATCCTCTACATATCTCTaGTGGAGTCATTTTGTGTTA +
Preference number: 5 (lower is better)
Translates to: GDEREPQAKECRQPLKVGSSTYL*WSHFVL
Trigger: TAACACAAAATGACTCCACAAGAGATATGTAGAGGA...TCCAACTTTTAGAGGCTGCCGGCATTCCTTGGCTTGTGGCTCCCTTTCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp GTCAGATCCTTCTGGCCAGACTTGTGTAAGCAGAGATACAGTCTTGTGTGCCTTGAGGGGATAAACATTTaGGCCCTAGAGTTGACAGAA +
Preference number: 5 (lower is better)
Translates to: VRSFWPDLCKQRYSLVCLEGINI*ALELTE
Trigger: TTCTGTCAACTCTAGGGCCAAAATGTTTATCCCCTC...AAGGCACACAAGACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGATCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS GCA 90 bp CCTTCTGCAAAGTCTCAGTGTCCACTGCTTTTTGATCAGCATATGTaGAGTCCTGTGGGATTTCCAGGTTCTTCTCTAGACACTTCACTA +
Preference number: 5 (lower is better)
Translates to: PSAKSQCPLLFDQHM*SPVGFPGSSLDTSL
Trigger: TAGTGAAGTGTCTAGAGAAGAACCTGGAAATCCCACAGGACTGCACATATGCTGATCAAAAAGCAGTGGACACTGAGACTTTGCAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393743.8
ENST00000679510.1
ENST00000680771.1
CDS-3UTR CAA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCGCATACTCGGCATCCTaGAAGAAAACTATGGTGAAT +
Preference number: 5 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFAYSAS*KKTMVN
Trigger: ATTCACCATAGTTTTCTTCAAGGATGCCGAGTATGC...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTGTGCCTTTTTGCTCTaGGGCCCACTAAAATCCTTC +
Preference number: 5 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCCAFLL*GPLKSF
Trigger: GAAGGATTTTAGTGGGCCCAAGAGCAAAAAGGCACA...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp GCAATTGAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCTCGTGTCCCATGTCTTaGACATACACTGCTTGTGGC +
Preference number: 5 (lower is better)
Translates to: AIENTRIEESMKLLNIAASCPMS*TYTACG
Trigger: GCCACAAGCAGTGTATGTCAAAGACATGGGACACGA...GGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp AGAAAAAGAAAGATGGACATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTCTGAGCTCAGGAATTTaGAGACCAGCCTGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: RKRKMDMQLSNSRWSMKPLSSGI*RPAWAA
Trigger: TGCTGCCCAGGCTGGTCTCAAAATTCCTGAGCTCAG...AGGCTTCATTGACCATCTACTGTTGCTTAGTTGCATGTCCATCTTTCTTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp GAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCTGTCAGCAATTTAATGATCCTTaGGCCAGGCGCAGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: ENTRIEESMKLLNIAACQQFNDP*ARRSGS
Trigger: AGAACCACTGCGCCTGGCCAAAGGATCATTAAATTG...CTGACAGGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp CAGGTTCAGTGTGATCTCAAAGGTCCCTGTAAGTGGAAGAGTGAGGCAGGAGAGACAAAAATAGGAACTTaGGTCATCTTTACCAACTGC +
Preference number: 5 (lower is better)
Translates to: QVQCDLKGPCKWKSEAGETKIGT*VIFTNC
Trigger: GCAGTTGGTAAAGATGACCAAAGTTCCTATTTTTGT...CTCTCCTGCCTCACTCTTCCACTTACAGGGACCTTTGAGATCACACTGAACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCTGTGTGCAAGATCATTaGTTGACTGGATTGGAGAGT +
Preference number: 5 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGCVQDH*LTGLES
Trigger: ACTCTCCAATCCAGTCAACAAATGATCTTGCACACA...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCAGAAGTTCAGGGAAGTaGAAATACGCATACTCGGCA +
Preference number: 5 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCRSSGK*KYAYSA
Trigger: TGCCGAGTATGCGTATTTCAACTTCCCTGAACTTCT...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTATCTAGCACAAGCTCTTaGAGAAAGAGGCAGATGGAG +
Preference number: 5 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELSSTSS*RKRQME
Trigger: CTCCATCTGCCTCTTTCTCAAAGAGCTTGTGCTAGA...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp CAGTTTCCTGACCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGATGGTACATTCTTTCAATATGATCTGTaGTTAGTGCAGCACATGGGT +
Preference number: 5 (lower is better)
Translates to: QFPDQRRALCFLKSDGTFFQYDL*LVQHMG
Trigger: ACCCATGTGCTGCACTAACAACAGATCATATTGAAA...GAATGTACCATCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCCTGGCCTGCTCTACGTaGCCATTTTTAATCCAACTT +
Preference number: 5 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCLACST*PFLIQL
Trigger: AAGTTGGATTAAAAATGGCAACGTAGAGCAGGCCAG...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGGCACTGATAGCACCTTaGCCTTGGCATCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: FLYISLVESFCVIYASVQALIAP*PWHPLG
Trigger: ACCCAGAGGATGCCAAGGCAAAGGTGCTATCAGTGC...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCAGAGCCTTTGGGGAGTaGAAATGCATAGCACAGAAG +
Preference number: 5 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTRAFGE*KCIAQK
Trigger: CTTCTGTGCTATGCATTTCAACTCCCCAAAGGCTCT...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp GCAATTGAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCAGTCTGTGGAGTTTCTaGGGCTGCTCTGGAGATAAT +
Preference number: 5 (lower is better)
Translates to: AIENTRIEESMKLLNIAASLWSF*GCSGDN
Trigger: ATTATCTCCAGAGCAGCCCAAGAAACTCCACAGACT...GGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTCAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCATTTTGGCCCTAGAGTaGACAGAATTAGACATTGAG +
Preference number: 5 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGILALE*TELDIE
Trigger: CTCAATGTCTAATTCTGTCAACTCTAGGGCCAAAAT...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTTATCATCATACTGTGTaGTCCATCCATCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: NSSHSPSLLVVDATAALSYHHTV*SIHHPS
Trigger: TGAGGGGTGATGGATGGACAACACAGTATGATGATA...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCCTTCTGGCTGTAGTCTaGCCAAACCCAGTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFLLAVV*PNPVLP
Trigger: TGGGAGAACTGGGTTTGGCAAGACTACAGCCAGAAG...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCATTTCTTTCCATTCTaGCTGCTGCCTGTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHHFFPF*LLPVPP
Trigger: TGGAGGCACAGGCAGCAGCAAGAATGGAAAGAAATG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCGCATACTCGGCATCCTaGAAGAAAACTATGGTGAAT +
Preference number: 5 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCAYSAS*KKTMVN
Trigger: ATTCACCATAGTTTTCTTCAAGGATGCCGAGTATGC...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTAGCATCTCGAAAATGTaGTTCGAACATCAATGGTGG +
Preference number: 5 (lower is better)
Translates to: NSSHSPSLLVVDATAALSSISKM*FEHQWW
Trigger: CCACCATTGATGTTCGAACAACATTTTCGAGATGCT...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGTCTCGTGTGCCTTTTaGCTCTTGGGCCCACTAAAA +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHVSCAF*LLGPLK
Trigger: TTTTAGTGGGCCCAAGAGCAAAAAGGCACACGAGAC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTAGCAATTATTTCAGCCTaGGTCTCGTGTGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELAIISA*VSCAFL
Trigger: CAAAAAGGCACACGAGACCAAGGCTGAAATAATTGC...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TCTCAGTGTATGCTACTAGGAATCTACCTAGAAGACTCCTCCGTAAACCCTGGCCCAACTTTTCCAAATTaGAAACATGGCATCATACAG +
Preference number: 5 (lower is better)
Translates to: SQCMLLGIYLEDSSVNPGPTFPN*KHGIIQ
Trigger: CTGTATGATGCCATGTTTCAAATTTGGAAAAGTTGG...GCCAGGGTTTACGGAGGAGTCTTCTAGGTAGATTCCTAGTAGCATACACTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCCTTTGGGAGGCCTTTTaGTCTCCTGCTTTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCLWEAF*SPAFSL
Trigger: TAAAGAAAAAGCAGGAGACAAAAAGGCCTCCCAAAG...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTGCTTCTTTATCAGCTTaGGGAGGCCTTTTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTASLSA*GGLFVS
Trigger: GGAGACAAAAAGGCCTCCCAAAGCTGATAAAGAAGC...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCAGTGTCCACTGCTTTTaGATCAGCATATGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTSVHCF*ISICAV
Trigger: GACTGCACATATGCTGATCAAAAAGCAGTGGACACT...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTTGAGCCTTTCCTGGTaGGCTGACAGAGATCATGGA +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHLSLSW*ADRDHG
Trigger: TCCATGATCTCTGTCAGCCAACCAGGAAAGGCTCAA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCTCCTTGCCCAAGTTTTaGAGACAGCTTCCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: SFCVIYASVQCILKPTGSSLPKF*RQLPSL
Trigger: CAGACTTGGAAGCTGTCTCAAAAACTTGGGCAAGGA...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp CCTTCACTCATTTTCACCTGCATGACTGTTACAGCCTTTGCACCTACATATTTCTTATTTGCCCCTACCTaGTTTCCACTAGAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: PSLIFTCMTVTAFAPTYFLFAPT*FPLEFQ
Trigger: CTGGAACTCTAGTGGAAACAAGGTAGGGGCAAATAA...GAAATATGTAGGTGCAAAGGCTGTAACAGTCATGCAGGTGAAAATGAGTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp GAGGCCAGAGTGGGACTATCTAAAGGGTCCCCTCACCCTCACTTTATTTTTATAAGAAGATGTGCTCACTaGTATGTCATCATTACGTGT +
Preference number: 5 (lower is better)
Translates to: EARVGLSKGSPHPHFIFIRRCAH*YVIITC
Trigger: ACACGTAATGATGACATACAAGTGAGCACATCTTCT...TATAAAAATAAAGTGAGGGTGAGGGGACCCTTTAGATAGTCCCACTCTGGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATATAGAGCAAGACTCTTaGCCTTGGCATCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHIEQDS*PWHPLG
Trigger: ACCCAGAGGATGCCAAGGCAAAGAGTCTTGCTCTAT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS CCA 90 bp ACATTTCTTTCCATTCTTGCTGCTGCCTGTGCCTCCAACCTGAACTaGCAAGTATTAAAGGTAGCAAATACCCTTTATTTTGGTACCTCT +
Preference number: 5 (lower is better)
Translates to: TFLSILAAACASNLN*QVLKVANTLYFGTS
Trigger: AGAGGTACCAAAATAAAGGGTATTTGCTACCTTTAATACTTGCCAGTTCAGGTTGGAGGCACAGGCAGCAGCAAGAATGGAAAGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393743.8
ENST00000514995.2
ENST00000679510.1
ENST00000679744.1
ENST00000680771.1
ENST00000680917.1
ENST00000680998.1
ENST00000681832.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTCCTTCTGGCCAGACTaGTGTAAGCAGAGATACAGT +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHSFWPD*CKQRYS
Trigger: ACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCATCCTTCTGGCCAGACTaGTGTAAGCAGAGATACAGT +
Preference number: 5 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLASFWPD*CKQRYS
Trigger: ACTGTATCTCTGCTTACACAAGTCTGGCCAGAAGGA...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCTTGGGCACCATTTCATaGGAGCTGTCTTTGATTGGT +
Preference number: 5 (lower is better)
Translates to: SFCVIYASVQCILKPTGSLGTIS*ELSLIG
Trigger: ACCAATCAAAGACAGCTCCAATGAAATGGTGCCCAA...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTGTGCCTTTTTGCTCTaGGGCCCACTAAAATCCTTC +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHCAFLL*GPLKSF
Trigger: GAAGGATTTTAGTGGGCCCAAGAGCAAAAAGGCACA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp AATTCTAGTCATTCTCCTTCCCTCCTTGTAGTGGATGCTACAGCTGCTTTGAGTTTAACTTTTCGAAGTTaGTTAGCCATGACATGGGCT +
Preference number: 5 (lower is better)
Translates to: NSSHSPSLLVVDATAALSLTFRS*LAMTWA
Trigger: AGCCCATGTCATGGCTAACAAACTTCGAAAAGTTAA...ACTCAAAGCAGCTGTAGCATCCACTACAAGGAGGGAAGGAGAATGACTAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATATGACTCTGGGTTGCTaGAAGGACAGCAATGAATGC +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHMTLGC*KDSNEC
Trigger: GCATTCATTGCTGTCCTTCAAGCAACCCAGAGTCAT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCAATGACTCTGGGTTGCTaGAAGGACAGCAATGAATGC +
Preference number: 5 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAMTLGC*KDSNEC
Trigger: GCATTCATTGCTGTCCTTCAAGCAACCCAGAGTCAT...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp ATGCAACTAAGCAACAGTAGATGGTCAATGAAGCCTAAGAATGGGGTACCCACAAAGGCTAAGACAACGTaGTCGTCTTCATTTTCACAT +
Preference number: 5 (lower is better)
Translates to: MQLSNSRWSMKPKNGVPTKAKTT*SSSFSH
Trigger: ATGTGAAAATGAAGACGACAACGTTGTCTTAGCCTT...TGTGGGTACCCCATTCTTAGGCTTCATTGACCATCTACTGTTGCTTAGTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATAGAAGTTCAGGGAAGTaGAAATACGCATACTCGGCA +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHRSSGK*KYAYSA
Trigger: TGCCGAGTATGCGTATTTCAACTTCCCTGAACTTCT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATAGCAGAGATACAGTCTaGTGTGCCTCTTCCGTAATA +
Preference number: 5 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDSRDTV*CASSVI
Trigger: TATTACGGAAGAGGCACACAAGACTGTATCTCTGCT...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTGGAATAAAACCCAAATaGGGCACCATTTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTGIKPK*GTISLE
Trigger: CTCCAATGAAATGGTGCCCAATTTGGGTTTTATTCC...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACGTCTCGTGTGCCTTTTaGCTCTTGGGCCCACTAAAA +
Preference number: 5 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYVSCAF*LLGPLK
Trigger: TTTTAGTGGGCCCAAGAGCAAAAAGGCACACGAGAC...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGCAATTATTTCAGCCTaGGTCTCGTGTGCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHAIISA*VSCAFL
Trigger: CAAAAAGGCACACGAGACCAAGGCTGAAATAATTGC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGGCTTCTTTATCAGCTTaGGGAGGCCTTTTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: FLYISLVESFCVIYASVQASLSA*GGLFVS
Trigger: GGAGACAAAAAGGCCTCCCAAAGCTGATAAAGAAGC...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTTGAGCCTTTCCTGGTaGGCTGACAGAGATCATGGA +
Preference number: 5 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYLSLSW*ADRDHG
Trigger: TCCATGATCTCTGTCAGCCAACCAGGAAAGGCTCAA...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp CCAGTGTATACTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCCATCAAGGAACACCTTaGATTGATAAAACTCGAAGT +
Preference number: 5 (lower is better)
Translates to: PVYTETHRQLHLRRGKYCHQGTP*IDKTRS
Trigger: ACTTCGAGTTTTATCAATCAAAGGTGTTCCTTGATG...GCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAGTATACACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp GAGAATACCAGGATCGAGGAGTCAATGAAGCTTTTGAATATTGCTGCCTGTCAGACTTTTCCCAAAAAGTaGTACTCAGTTGTTCAAAGG +
Preference number: 5 (lower is better)
Translates to: ENTRIEESMKLLNIAACQTFPKK*YSVVQR
Trigger: CCTTTGAACAACTGAGTACAACTTTTTGGGAAAAGT...CTGACAGGCAGCAATATTCAAAAGCTTCATTGACTCCTCGATCCTGGTATTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp ACTGACCTACCACAAAAATTGATCAGTTCTGTCTCTACAACACCAAATTTCCTTGTTGACATAGTGAGCTaGGAGTCTATCCCTGACACA +
Preference number: 5 (lower is better)
Translates to: TDLPQKLISSVSTTPNFLVDIVS*ESIPDT
Trigger: TGTGTCAGGGATAGACTCCAAGCTCACTATGTCAAC...AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp ATTCCCCAGAAACCGATGAATAGGTCAGGTTACATGGCAAAGGGGAATGAATTAGACCTACCACAAAAATaGATCAGTTCTGTCTCTACA +
Preference number: 5 (lower is better)
Translates to: IPQKPMNRSGYMAKGNELDLPQK*ISSVST
Trigger: TGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTC...TAATTCATTCCCCTTTGCCATGTAACCTGACCTATTCATCGGTTTCTGGGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCCATTTGTTGACTGGATaGGAGAGTGGTGAACCTCAA +
Preference number: 5 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFHLLTG*ESGEPQ
Trigger: TTGAGGTTCACCACTCTCCAATCCAGTCAACAAATG...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTCCCTGGCTTAGACTATaGTATCATCATACTGTGTTG +
Preference number: 5 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTPWLRL*YHHTVL
Trigger: CAACACAGTATGATGATACAATAGTCTAAGCCAGGG...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCTCTCCTTGCTCCACATaGCCAATTCTAGTCATTCTC +
Preference number: 5 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFSPCST*PILVIL
Trigger: GAGAATGACTAGAATTGGCAATGTGGAGCAAGGAGA...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp TCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTGAAACCCACAGGCAGCCAAATACCCTTTATTTaGGTACCTCTAAGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: SFCVIYASVQCILKPTGSQIPFI*VPLSGS
Trigger: ACTGCCACTTAGAGGTACCAAAATAAAGGGTATTTG...GCTGCCTGTGGGTTTCAGTATACACTGGACACTAGCATAAATAACACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATAGCATCTCGAAAATGTaGTTCGAACATCAATGGTGG +
Preference number: 5 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDSISKM*FEHQWW
Trigger: CCACCATTGATGTTCGAACAACATTTTCGAGATGCT...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTCTAGCACAAGCTCTTaGAGAAAGAGGCAGATGGAG +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSSTSS*RKRQME
Trigger: CTCCATCTGCCTCTTTCTCAAAGAGCTTGTGCTAGA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGGAATAAAACCCAAATaGGGCACCATTTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHGIKPK*GTISLE
Trigger: CTCCAATGAAATGGTGCCCAATTTGGGTTTTATTCC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCAGGAATAAAACCCAAATaGGGCACCATTTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAGIKPK*GTISLE
Trigger: CTCCAATGAAATGGTGCCCAATTTGGGTTTTATTCC...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TTTTCTTTAGGAAAGTGCTCACACTTTCAGCTGCGTTTTCTACAGCTCCTAACTCTGGATGTAAAGAACTaGCCAACTCATCAAATCCTA +
Preference number: 5 (lower is better)
Translates to: FSLGKCSHFQLRFLQLLTLDVKN*PTHQIL
Trigger: TAGGATTTGATGAGTTGGCAAGTTCTTTACATCCAG...AGTTAGGAGCTGTAGAAAACGCAGCTGAAAGTGTGAGCACTTTCCTAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGAACAGTTGCTGCCACTaGATTAACAAGGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: FLYISLVESFCVIYASVQNSCCH*INKGLC
Trigger: ACAAAGGCCCTTGTTAATCAAGTGGCAGCAACTGTT...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCTTTGGGAGGCCTTTTaGTCTCCTGCTTTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHLWEAF*SPAFSL
Trigger: TAAAGAAAAAGCAGGAGACAAAAAGGCCTCCCAAAG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp CCCAGTTCTCCCAAGATAACTCTGTTTCTCCTTGTTAAAGTGATGATCATTTTCCTTTGGGAGGCCTTTTaGTCTCCTGCTTTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: PSSPKITLFLLVKVMIIFLWEAF*SPAFSL
Trigger: TAAAGAAAAAGCAGGAGACAAAAAGGCCTCCCAAAG...GAAAATGATCATCACTTTAACAAGGAGAAACAGAGTTATCTTGGGAGAACTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680917.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACGCTTCTTTATCAGCTTaGGGAGGCCTTTTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNASLSA*GGLFVS
Trigger: GGAGACAAAAAGGCCTCCCAAAGCTGATAAAGAAGC...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCTTCATATCAGCCAGTTaGGAAACAATTCGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTFISAS*ETIRRK
Trigger: TTTCCTACGAATTGTTTCCAAACTGGCTGATATGAA...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR CAA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATCAGAACATGGCAGGTTaGATTGCAACTCTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDQNMAG*IATLFD
Trigger: ATCAAACAGAGTTGCAATCAAACCTGCCATGTTCTG...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR CAA 90 bp CTGAAACCCACAGGCAGCTACATCTACGAAGAGGAAAATATTGCTTTCTTTACCTCCTCTACATATCTCTaGTGGAGTCATTTTGTGTTA +
Preference number: 5 (lower is better)
Translates to: LKPTGSYIYEEENIAFFTSSTYL*WSHFVL
Trigger: TAACACAAAATGACTCCACAAGAGATATGTAGAGGA...GGTAAAGAAAGCAATATTTTCCTCTTCGTAGATGTAGCTGCCTGTGGGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCAAATACCCTTTATTTaGGTACCTCTAAGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHQIPFI*VPLSGS
Trigger: ACTGCCACTTAGAGGTACCAAAATAAAGGGTATTTG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACAGCAGAGATACAGTCTaGTGTGCCTCTTCCGTAATA +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSRDTV*CASSVI
Trigger: TATTACGGAAGAGGCACACAAGACTGTATCTCTGCT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTGGGCACCATTTCATaGGAGCTGTCTTTGATTGGT +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLGTIS*ELSLIG
Trigger: ACCAATCAAAGACAGCTCCAATGAAATGGTGCCCAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCTGGATGTAAAGAACTaGCCAACTCATCAAATCCTA +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHLDVKN*PTHQIL
Trigger: TAGGATTTGATGAGTTGGCAAGTTCTTTACATCCAG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACAACAGTTGCTGCCACTaGATTAACAAGGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNNSCCH*INKGLC
Trigger: ACAAAGGCCCTTGTTAATCAAGTGGCAGCAACTGTT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACCTGGCCTGCTCTACGTaGCCATTTTTAATCCAACTT +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLACST*PFLIQL
Trigger: AAGTTGGATTAAAAATGGCAACGTAGAGCAGGCCAG...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACAGTGTCCACTGCTTTTaGATCAGCATATGTGCAGTC +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSVHCF*ISICAV
Trigger: GACTGCACATATGCTGATCAAAAAGCAGTGGACACT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATGATTTACAAGGCATGTaGACACCTAAAGCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHDLQGM*TPKASV
Trigger: AACACTTGCTTTAGGTGTCAACATGCCTTGTAAATC...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGATTTACAAGGCATGTaGACACCTAAAGCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDDLQGM*TPKASV
Trigger: AACACTTGCTTTAGGTGTCAACATGCCTTGTAAATC...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TATAAGAAAGGCTTTCCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATTTGATTCCAAAGTGTTaGCTCTTTCCACTTCATCGT +
Preference number: 5 (lower is better)
Translates to: YKKGFPWLGRSKEIPSDDLIPKC*LFPLHR
Trigger: ACGATGAAGTGGAAAGAGCAAACACTTTGGAATCAA...ATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGGAAAGCCTTTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTTGATTCCAAAGTGTTaGCTCTTTCCACTTCATCGT +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHLIPKC*LFPLHR
Trigger: ACGATGAAGTGGAAAGAGCAAACACTTTGGAATCAA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ACTGACCTACCACAAAAATTGATCAGTTCTGTCTCTACAACACCAAATTTCCTTGAGTCAATGAAGCTTTaGAATATTGCTGCCTGTCAG +
Preference number: 5 (lower is better)
Translates to: TDLPQKLISSVSTTPNFLESMKL*NIAACQ
Trigger: CTGACAGGCAGCAATATTCAAAAGCTTCATTGACTC...AAGGAAATTTGGTGTTGTAGAGACAGAACTGATCAATTTTTGTGGTAGGTCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCAGGCAATAAAAGTAGATaGTCCCTTAAGAGCCTTTAC +
Preference number: 5 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAGNKSR*SLKSLY
Trigger: GTAAAGGCTCTTAAGGGACAATCTACTTTTATTGCC...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511317.2
CDS-3UTR CAA 90 bp GTCTTTATGTTCATTCTGCATTCCTGCCACAAAAGTCTAGACATCTTAAGAAGAATAGCTAATGATCTGTaGTTAGTGCAGCACATGGGT +
Preference number: 5 (lower is better)
Translates to: VFMFILHSCHKSLDILRRIANDL*LVQHMG
Trigger: ACCCATGTGCTGCACTAACAACAGATCATTAGCTAT...TCTTCTTAAGATGTCTAGACTTTTGTGGCAGGAATGCAGAATGAACATAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513997.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACGCATACTCGGCATCCTaGAAGAAAACTATGGTGAAT +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNAYSAS*KKTMVN
Trigger: ATTCACCATAGTTTTCTTCAAGGATGCCGAGTATGC...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACAGCATCTCGAAAATGTaGTTCGAACATCAATGGTGG +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSISKM*FEHQWW
Trigger: CCACCATTGATGTTCGAACAACATTTTCGAGATGCT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTCATTGGAGCTGTCTTaGATTGGTGATGGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: FLYISLVESFCVIYASVQSLELS*IGDGFF
Trigger: AAAGAAACCATCACCAATCAAAGACAGCTCCAATGA...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGCTGGATGTAAAGAACTaGCCAACTCATCAAATCCTA +
Preference number: 5 (lower is better)
Translates to: FLYISLVESFCVIYASVQLDVKN*PTHQIL
Trigger: TAGGATTTGATGAGTTGGCAAGTTCTTTACATCCAG...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATCCAACTTTTCCAAATTaGAAACATGGCATCATACAG +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHPTFPN*KHGIIQ
Trigger: CTGTATGATGCCATGTTTCAAATTTGGAAAAGTTGG...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp CCTTGGTTAGGCAGAAGTAAGGAAATCCCATCAGATGATGAAATTATGTTAGCACCAACTTTTCCAAATTaGAAACATGGCATCATACAG +
Preference number: 5 (lower is better)
Translates to: PWLGRSKEIPSDDEIMLAPTFPN*KHGIIQ
Trigger: CTGTATGATGCCATGTTTCAAATTTGGAAAAGTTGG...TGCTAACATAATTTCATCATCTGATGGGATTTCCTTACTTCTGCCTAACCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TTCCTCTACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTTAACTTTTCGAAGTTaGTTAGCCATGACATGGGCT +
Preference number: 5 (lower is better)
Translates to: FLYISLVESFCVIYASVQLTFRS*LAMTWA
Trigger: AGCCCATGTCATGGCTAACAAACTTCGAAAAGTTAA...CTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGTAGAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATTTCATATCAGCCAGTTaGGAAACAATTCGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHFISAS*ETIRRK
Trigger: TTTCCTACGAATTGTTTCCAAACTGGCTGATATGAA...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp TGTTATCCTGGACTAATCCTATCAAGGAACCATGTTTGTAGAAATCCAGTGCATACTTTTCCCAAAAAGTaGTACTCAGTTGTTCAAAGG +
Preference number: 5 (lower is better)
Translates to: CYPGLILSRNHVCRNPVHTFPKK*YSVVQR
Trigger: CCTTTGAACAACTGAGTACAACTTTTTGGGAAAAGT...ATGCACTGGATTTCTACAAACATGGTTCCTTGATAGGATTAGTCCAGGATAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTCATTGGAGCTGTCTTaGATTGGTGATGGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNSLELS*IGDGFF
Trigger: AAAGAAACCATCACCAATCAAAGACAGCTCCAATGA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTTCAATATGATCTGTaGTTAGTGCAGCACATGGGT +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNFQYDL*LVQHMG
Trigger: ACCCATGTGCTGCACTAACAACAGATCATATTGAAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACTTTCAATATGATCTGTaGTTAGTGCAGCACATGGGT +
Preference number: 5 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYFQYDL*LVQHMG
Trigger: ACCCATGTGCTGCACTAACAACAGATCATATTGAAA...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACTTAACTTTTCGAAGTTaGTTAGCCATGACATGGGCT +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNLTFRS*LAMTWA
Trigger: AGCCCATGTCATGGCTAACAAACTTCGAAAAGTTAA...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACGTGCATCTTGGAACTTaGGTGGAAAATATCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYVHLGT*VENIFF
Trigger: GAAGAAGATATTTTCCACCAAAGTTCCAAGATGCAC...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680771.1
CDS-3UTR CAA 90 bp ATGTTATATTCATCTAAAGCATCACTAAAATCCTCAGGGAGATCATCAAGGAACAAGGCTAAGACAACGTaGTCGTCTTCATTTTCACAT +
Preference number: 5 (lower is better)
Translates to: MLYSSKASLKSSGRSSRNKAKTT*SSSFSH
Trigger: ATGTGAAAATGAAGACGACAACGTTGTCTTAGCCTT...GTTCCTTGATGATCTCCCTGAGGATTTTAGTGATGCTTTAGATGAATATAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679510.1
CDS-3UTR CAA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACAAGGCTAAGACAACGTaGTCGTCTTCATTTTCACAT +
Preference number: 5 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYKAKTT*SSSFSH
Trigger: ATGTGAAAATGAAGACGACAACGTTGTCTTAGCCTT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS CCA 90 bp GCTAAAATGGGAAAATCTTATTTGCTTAAGTTTCAAGATAAGAACTaGGTCAACTTCAAGATAAAGGCTCTTAAACCACCTTCAAGACTC +
Preference number: 5 (lower is better)
Translates to: AKMGKSYLLKFQDKN*VNFKIKALKPPSRL
Trigger: GAGTCTTGAAGGTGGTTTAAGAGCCTTTATCTTGAAGTTGACCCAGTTCTTATCTTGAAACTTAAGCAAATAAGATTTTCCCATTTTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679744.1
CDS-3UTR CAA 90 bp ACATATCTCTTGTGGAGTCATTTTGTGTTATTTATGCTAGTGTCCAGTGTATACACTTTTCCCAAAAAGTaGTACTCAGTTGTTCAAAGG +
Preference number: 5 (lower is better)
Translates to: TYLLWSHFVLFMLVSSVYTFPKK*YSVVQR
Trigger: CCTTTGAACAACTGAGTACAACTTTTTGGGAAAAGT...GTATACACTGGACACTAGCATAAATAACACAAAATGACTCCACAAGAGATATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000511317.2
ENST00000680771.1
CDS TCA 72 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTCCTaGCCTCATGATCCTCCTGACCTCATGATCCACCTG +
Preference number: 6 (lower is better)
Translates to: GFTMLARMVLIS*PHDPPDLMIHL
Trigger: CAGGTGGATCATGAGGTCAGGAGGATCATGAGGTCAGGAGATCAAGACCATCCTGGCTAACATGGTGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680998.1
CDS CAA 90 bp GAACCAGAAAGCAGGCCCCCACAAGACACCAAATCTCCCAGGGCCTaGACCTTGGACTTCCCAGCCTCCAGAATTCTGAAAAATAAATCT +
Preference number: 6 (lower is better)
Translates to: EPESRPPQDTKSPRA*TLDFPASRILKNKS
Trigger: AGATTTATTTTTCAGAATTCTGGAGGCTGGGAAGTCCAAGGTCAAGGCCCTGGGAGATTTGGTGTCTTGTGGGGGCCTGCTTTCTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679744.1
CDS GCA 72 bp TATAAAAGAGACCACAGAGATCTCCCCTGTCCCTTCTaGCATGTGAGGGCACAGCAAGAAGACAGCTTATCT +
Preference number: 6 (lower is better)
Translates to: YKRDHRDLPCPF*HVRAQQEDSLS
Trigger: AGATAAGCTGTCTTCTTGCTGTGCCCTCACATGGCAGAAGGGACAGGGGAGATCTCTGTGGTCTCTTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679744.1
CDS TCA 72 bp AATACCTTCTGCAAAGTCTCAGTGTCCACTGCTTTTTaGTCAGCATATGTGCAGTCCTGTGGGATTTCCAGG +
Preference number: 6 (lower is better)
Translates to: NTFCKVSVSTAF*SAYVQSCGISR
Trigger: CCTGGAAATCCCACAGGACTGCACATATGCTGATCAAAAAGCAGTGGACACTGAGACTTTGCAGAAGGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393743.8
ENST00000679510.1
ENST00000680771.1
CDS TCA 72 bp AATGTGATGGTATCTGGAGGCAAATCCTCTGGGAGATaGTTAGGTCATGAAGGAAGAACCCTCATGAATGGG +
Preference number: 6 (lower is better)
Translates to: NVMVSGGKSSGR*LGHEGRTLMNG
Trigger: CCCATTCATGAGGGTTCTTCCTTCATGACCTAATCATCTCCCAGAGGATTTGCCTCCAGATACCATCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505393.1
ENST00000679744.1
CDS GCA 72 bp AAGTCTCAGTGTCCACTGCTTTTTGATCAGCATATGTaGAGTCCTGTGGGATTTCCAGGTTCTTCTCTAGAC +
Preference number: 6 (lower is better)
Translates to: KSQCPLLFDQHM*SPVGFPGSSLD
Trigger: GTCTAGAGAAGAACCTGGAAATCCCACAGGACTGCACATATGCTGATCAAAAAGCAGTGGACACTGAGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393743.8
ENST00000679510.1
ENST00000680771.1
CDS TCA 72 bp GTATGCATAAAGGCAAAGAACATCAGATTCTTGCCCTaGGGAAAGTACAACGTTGACCTTCCTTGCCCAAGA +
Preference number: 6 (lower is better)
Translates to: VCIKAKNIRFLP*GKYNVDLPCPR
Trigger: TCTTGGGCAAGGAAGGTCAACGTTGTACTTTCCTCAGGGCAAGAATCTGATGTTCTTTGCCTTTATGCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393743.8
ENST00000679510.1
ENST00000679744.1
ENST00000680771.1
ENST00000680917.1
ENST00000680998.1
ENST00000681832.1
CDS TCA 72 bp AGTTATAAAAACCACACCTGTTGGATCTCAGTTTCCTaGCCAGAGGAGGGCTCTCTGTTTCCTAAAAAGCGA +
Preference number: 6 (lower is better)
Translates to: SYKNHTCWISVS*PEEGSLFPKKR
Trigger: TCGCTTTTTAGGAAACAGAGAGCCCTCCTCTGGTCAGGAAACTGAGATCCAACAGGTGTGGTTTTTATAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681832.1
CDS TCA 72 bp GGATTCAGATCAGCTCACTGGTCCTGCCCCCACTCCTaGAATCATTTTTATACTACAACTATAGAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: GFRSAHWSCPHS*NHFYTTTIEER
Trigger: CCTTTCCTCTATAGTTGTAGTATAAAAATGATTTCAGGAGTGGGGGCAGGACCAGTGAGCTGATCTGAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679744.1
CDS TCA 72 bp ACTGGGGATCCAATTCAGTTGTTCTCCACTACACAGTaGCTAATGATCCTGCAAAAGTTGAGTGAGTCTAGG +
Preference number: 6 (lower is better)
Translates to: TGDPIQLFSTTQ*LMILQKLSESR
Trigger: CCTAGACTCACTCAACTTTTGCAGGATCATTAGTCACTGTGTAGTGGAGAACAACTGAATTGGATCCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679744.1
CDS CAA 72 bp AAATACCTTCTGCAAAGTCTCAGTGTCCACTGCTTTTaGATCAGCATATGTGCAGTCCTGTGGGATTTCCAG +
Preference number: 6 (lower is better)
Translates to: KYLLQSLSVHCF*ISICAVLWDFQ
Trigger: CTGGAAATCCCACAGGACTGCACATATGCTGATCAAAAAGCAGTGGACACTGAGACTTTGCAGAAGGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393743.8
ENST00000679510.1
ENST00000680771.1
CDS CCA 72 bp TCCATTCTTGCTGCTGCCTGTGCCTCCAACCTGAACTaGCAAGTATTAAAGGTAGCAAATACCCTTTATTTT +
Preference number: 6 (lower is better)
Translates to: SILAAACASNLN*QVLKVANTLYF
Trigger: AAAATAAAGGGTATTTGCTACCTTTAATACTTGCCAGTTCAGGTTGGAGGCACAGGCAGCAGCAAGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393743.8
ENST00000514995.2
ENST00000679510.1
ENST00000679744.1
ENST00000680771.1
ENST00000680917.1
ENST00000680998.1
ENST00000681832.1
CDS TCA 72 bp CATACCTTTCAATATATTGAAACCGAATCCCCAATGTaGTGGTATCTGGAGGCAAATCCTCTGGGAGATGAT +
Preference number: 6 (lower is better)
Translates to: HTFQYIETESPM*WYLEANPLGDD
Trigger: ATCATCTCCCAGAGGATTTGCCTCCAGATACCATCACATTGGGGATTCGGTTTCAATATATTGAAAGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505393.1
CDS GCA 72 bp AAATGTTGTAAGAACATTTCTTTCCATTCTTGCTGCTaGCTGTGCCTCCAACCTGAACTGGCAAGTATTAAA +
Preference number: 6 (lower is better)
Translates to: KCCKNISFHSCC*LCLQPELASIK
Trigger: TTTAATACTTGCCAGTTCAGGTTGGAGGCACAGGCAGCAGCAAGAATGGAAAGAAATGTTCTTACAACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393743.8
ENST00000514995.2
ENST00000679510.1
ENST00000679744.1
ENST00000680771.1
ENST00000680917.1
ENST00000680998.1
ENST00000681832.1
CDS CAA 90 bp TCAGGAAATATGGGTAACTCTCTTCCAAGAAACTTCCCCACTCTTTaGATAAGCATCTCGAAAATGTTGTTCGAACATCAATGGTGGTAT +
Preference number: 6 (lower is better)
Translates to: SGNMGNSLPRNFPTL*ISISKMLFEHQWWY
Trigger: ATACCACCATTGATGTTCGAACAACATTTTCGAGATGCTTATCAAAAGAGTGGGGAAGTTTCTTGGAAGAGAGTTACCCATATTTCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000393743.8
ENST00000679510.1
ENST00000679744.1
ENST00000680771.1
ENST00000680917.1
ENST00000680998.1
ENST00000681832.1
CDS TCA 72 bp CACCAACCATCAACTACAGTTGATAACACAAAAACCTaGCCTTGGCAGAGATTTAACAAAGGAAAAATAGAG +
Preference number: 6 (lower is better)
Translates to: HQPSTTVDNTKT*PWQRFNKGKIE
Trigger: CTCTATTTTTCCTTTGTTAAATCTCTGCCAAGGTCAGGTTTTTGTGTTATCAACTGTAGTTGATGGTTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680998.1
CDS CAA 72 bp AAATGGACTACACAAGACCAGGAATTATTTACTCAGTaGAAAGGTCTCTTTGGTTTTTATCACTGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: KWTTQDQELFTQ*KGLFGFYHCFF
Trigger: AAAGAAGCAGTGATAAAAACCAAAGAGACCTTTCAACTGAGTAAATAATTCCTGGTCTTGTGTAGTCCATTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679744.1
CDS CAA 72 bp ATCTTTGTTTCTAAAGCCTCTCAATTTGTGATATTTTaGTTACAGAAGCCTGTTGAATGGGCTAAGAGAGTA +
Preference number: 6 (lower is better)
Translates to: IFVSKASQFVIF*LQKPVEWAKRV
Trigger: TACTCTCTTAGCCCATTCAACAGGCTTCTGTAACAAAAATATCACAAATTGAGAGGCTTTAGAAACAAAGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679744.1