RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDX54 (Homo sapiens)

Ensembl gene IDs: ENSG00000123064

Ensembl transcript IDs: ENST00000306014.10, ENST00000314045.11, ENST00000546869.1, ENST00000546898.1, ENST00000548786.1, ENST00000549271.1, ENST00000550016.5, ENST00000551344.1, ENST00000551912.1, ENST00000552375.1

Found 615 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGTCGGCGAGAGGATGAGGGCGCGGGCCCCGGTCTGGGCACTGTaGGTCTTGAGCCGCTCGAACATTGGGAGGAGGAAGCAGGCTGTC +
Preference number: 1 (lower is better)
Translates to: RVGERMRARAPVWAL*VLSRSNIGRRKQAV
Trigger: GACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCATCCTCTCGCCGACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CCA 90 bp GCCAGCTCTCGGGTCGGCGAGAGGATGAGGGCGCGGGCCCCGGTCTaGGCACTGTGGGTCTTGAGCCGCTCGAACATTGGGAGGAGGAAG +
Preference number: 1 (lower is better)
Translates to: ASSRVGERMRARAPV*ALWVLSRSNIGRRK
Trigger: CTTCCTCCTCCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCATCCTCTCGCCGACCCGAGAGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CCA 90 bp AATTCCACCAGCAGTTTGGGCAGCGTGGCGGAGAACAGCACCGTCTaGTGGCCCCCGGGGAGGCGGGCGATGATCTCCTGCAGCTGCTCT +
Preference number: 1 (lower is better)
Translates to: NSTSSLGSVAENSTV*WPPGRRAMISCSCS
Trigger: AGAGCAGCTGCAGGAGATCATCGCCCGCCTCCCCGGGGGCCACCAGACGGTGCTGTTCTCCGCCACGCTGCCCAAACTGCTGGTGGAATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR GCA 90 bp AGGCTGTCTTGCCACTGCCCGTCCGGGCCATGGCCACCACGTCCTTaGCATCCAAGATCACCGGGATGGTCTTCCTCTGGATGGGTGTTG +
Preference number: 1 (lower is better)
Translates to: RLSCHCPSGPWPPRP*HPRSPGWSSSGWVL
Trigger: CAACACCCATCCAGAGGAAGACCATCCCGGTGATCTTGGATGGCAAGGACGTGGTGGCCATGGCCCGGACGGGCAGTGGCAAGACAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CCA 90 bp CAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTaGCCTGCCTGGCTTTGCTGGCGAACTCCTGCACACCCTTCAAGG +
Preference number: 1 (lower is better)
Translates to: QNTWKQQQLSCQLKS*PAWLCWRTPAHPSR
Trigger: CCTTGAAGGGTGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR GCA 90 bp TGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTaGCACGTTAGCTGGGATTTTAGTACCTGGGTCTCTCCATTCCAG +
Preference number: 1 (lower is better)
Translates to: WTRQQNSPSGDPQLL*HVSWDFSTWVSPFQ
Trigger: CTGGAATGGAGAGACCCAGGTACTAAAATCCCAGCTAACGTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 90 bp CAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCTGCCTGGCTTTGCTaGCGAACTCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCT +
Preference number: 1 (lower is better)
Translates to: QQLSCQLKSWPAWLC*RTPAHPSRPCSNVS
Trigger: AGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCAACTCAGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 90 bp TGGCACCTGGTTTGTGCTCTGAGCTTCACTTTCCTCATCGCTAAATaGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTC +
Preference number: 1 (lower is better)
Translates to: WHLVCALSFTFLIAK*TRQQNSPSGDPQLL
Trigger: GAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGAAAGTGAAGCTCAGAGCACAAACCAGGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 90 bp CGAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTaGCCTGAGGCTTTCAAAACCCAGAACGGTTTAGGATCTCAGTCA +
Preference number: 1 (lower is better)
Translates to: RGSCEGVCSRSSWEG*PEAFKTQNGLGSQS
Trigger: TGACTGAGATCCTAAACCGTTCTGGGTTTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR GCA 90 bp ACGTATTCCACACTCTGCAGCTTCAGGCTCATTTCCACAGCCACATaGACCAACCGTCCGGGCGTGGCAATAATTATGTCGGGATTTTCG +
Preference number: 1 (lower is better)
Translates to: TYSTLCSFRLISTAT*TNRPGVAIIMSGFS
Trigger: CGAAAATCCCGACATAATTATTGCCACGCCCGGACGGTTGGTGCATGTGGCTGTGGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR TCA 90 bp GCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATGACTaGTCCAGTTACAAGAAAATAAAGCTGATTGATGTAAATGAAAAT +
Preference number: 1 (lower is better)
Translates to: ATHGDKSRSQTNEYD*SSYKKIKLIDVNEN
Trigger: ATTTTCATTTACATCAATCAGCTTTATTTTCTTGTAACTGGATCAGTCATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CAA 90 bp AGCACGGGCTCCGTGAGGCCAGCCCGGGCAAATTCCACCAGCAGTTaGGGCAGCGTGGCGGAGAACAGCACCGTCTGGTGGCCCCCGGGG +
Preference number: 2 (lower is better)
Translates to: STGSVRPARANSTSS*GSVAENSTVWWPPG
Trigger: CCCCGGGGGCCACCAGACGGTGCTGTTCTCCGCCACGCTGCCCAAACTGCTGGTGGAATTTGCCCGGGCTGGCCTCACGGAGCCCGTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CAA 90 bp GGCGAGAGGATGAGGGCGCGGGCCCCGGTCTGGGCACTGTGGGTCTaGAGCCGCTCGAACATTGGGAGGAGGAAGCAGGCTGTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: GERMRARAPVWALWV*SRSNIGRRKQAVLP
Trigger: TGGCAAGACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCATCCTCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR TCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACGTGAGGGGCCCAGCCTaGGAATCCAGCTGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LPPSPDTGEQREREPLRDVRGPA*ESSCWG
Trigger: GCCCCAGCAGCTGGATTCTCAGGCTGGGCCCCTCAC...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp CACCGTCTGGTGGCCCCCGGGGAGGCGGGCGATGATCTCCTGCAGCTGCTCTGCTGGCCACCACGTCCTTaGCATCCAAGATCACCGGGA +
Preference number: 2 (lower is better)
Translates to: HRLVAPGEAGDDLLQLLCWPPRP*HPRSPG
Trigger: TCCCGGTGATCTTGGATGGCAAGGACGTGGTGGCCA...GCAGAGCAGCTGCAGGAGATCATCGCCCGCCTCCCCGGGGGCCACCAGACGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CAA 90 bp TGGGTCTTGAGCCGCTCGAACATTGGGAGGAGGAAGCAGGCTGTCTaGCCACTGCCCGTCCGGGCCATGGCCACCACGTCCTTGCCATCC +
Preference number: 2 (lower is better)
Translates to: WVLSRSNIGRRKQAV*PLPVRAMATTSLPS
Trigger: GGATGGCAAGGACGTGGTGGCCATGGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTCAAGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR CCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACCTGTTCAGAGTGCTGTaGGCCTGCCATGAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: LPPSPDTGEQREREPLRDLFRVL*ACHEGH
Trigger: GTGCCCCTCATGGCAGGCCCACAGCACTCTGAACAG...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp GTGAACTTGCCTAGCTCCTTAGTGAACTTCAGGGTCTGCAGGGCCAGCTCTCGGGCGCGGGCCCCGGTCTaGGCACTGTGGGTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: VNLPSSLVNFRVCRASSRARAPV*ALWVLS
Trigger: GCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGC...CCGAGAGCTGGCCCTGCAGACCCTGAAGTTCACTAAGGAGCTAGGCAAGTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR CCA 90 bp CGTCTGGTGGCCCCCGGGGAGGCGGGCGATGATCTCCTGCAGCTGCTCTGCGAATGCAGGGCTGCAAACTaGTCTTCCATCCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: RLVAPGEAGDDLLQLLCECRAAN*SSILSP
Trigger: TGGAGACAGGATGGAAGACCAGTTTGCAGCCCTGCA...TTCGCAGAGCAGCTGCAGGAGATCATCGCCCGCCTCCCCGGGGGCCACCAGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CAA 90 bp CAGGCTGTCTTGCCACTGCCCGTCCGGGCCATGGCCACCACGTCCTaGCCATCCAAGATCACCGGGATGGTCTTCCTCTGGATGGGTGTT +
Preference number: 2 (lower is better)
Translates to: QAVLPLPVRAMATTS*PSKITGMVFLWMGV
Trigger: AACACCCATCCAGAGGAAGACCATCCCGGTGATCTTGGATGGCAAGGACGTGGTGGCCATGGCCCGGACGGGCAGTGGCAAGACAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR TCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGGTGGGGGCTGGACAGTaGCTCTGGGGCTGGGATGTG +
Preference number: 2 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRVGAGQ*LWGWDV
Trigger: CACATCCCAGCCCCAGAGTCACTGTCCAGCCCCCAC...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR TCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACCAATGGGGTGTGGACTaGGTGGCTCTTCCTGAATCC +
Preference number: 2 (lower is better)
Translates to: LPPSPDTGEQREREPLRDQWGVD*VALPES
Trigger: GGATTCAGGAAGAGCCACTCAGTCCACACCCCATTG...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAGGGCCAGGCACACAGTaGTGCACGGGAACGTCTGCT +
Preference number: 2 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPGPGTQ*CTGTSA
Trigger: AGCAGACGTTCCCGTGCACCACTGTGTGCCTGGCCC...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCCGCGTGTTGAGGGGTaGGGGCTGGACAGTGACTCT +
Preference number: 2 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRPRVEG*GLDSDS
Trigger: AGAGTCACTGTCCAGCCCCCACCCCTCAACACGCGG...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACGACCCGCAACTCCTCTaGCACGTTAGCTGGGATTTT +
Preference number: 2 (lower is better)
Translates to: LPPSPDTGEQREREPLRDDPQLL*HVSWDF
Trigger: AAAATCCCAGCTAACGTGGCAGAGGAGTTGCGGGTC...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp TGCTCGTTGAGCTTGGTATCCACGTCAAGCCGGATGAGCACGGGCTCCGTGAGGATTTCCACAGCCACATaGACCAACCGTCCGGGCGTG +
Preference number: 2 (lower is better)
Translates to: CSLSLVSTSSRMSTGSVRISTAT*TNRPGV
Trigger: CACGCCCGGACGGTTGGTGCATGTGGCTGTGGAAAT...CCTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTCCTTGCCCCCTGGGCTaGGCATCCTGTTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPPCPLG*ASCSPP
Trigger: GGGAGGGGAACAGGATGCCCAGCCCAGGGGGCAAGG...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACGGGGTGTGGACTGAGTaGCTCTTCCTGAATCCGTTT +
Preference number: 2 (lower is better)
Translates to: LPPSPDTGEQREREPLRDGVWTE*LFLNPF
Trigger: AAACGGATTCAGGAAGAGCCACTCAGTCCACACCCC...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR TCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCATCCATTGCCAAACCCTaGGGCACTCAGGGCTCTGAC +
Preference number: 2 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPSIAKP*GTQGSD
Trigger: GTCAGAGCCCTGAGTGCCTCAGGGTTTGGCAATGGA...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACTGGCCTGCCTGGCTTTaGTGGCGAACTCCTGCACAC +
Preference number: 2 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHWPAWL*WRTPAH
Trigger: GTGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCA...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAACATGCAGGACCTCTCTaGCATGCTGGCCGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKHAGPL*HAGRPG
Trigger: CCCAGGCCGGCCAGCATGGCAGAGAGGTCCTGCATG...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACATTTCCAATGGGGTGTaGACTGAGTGGCTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LPPSPDTGEQREREPLRDISNGV*TEWLFL
Trigger: CAGGAAGAGCCACTCAGTCCACACCCCATTGGAAAT...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp TCGTTGAGCTTGGTATCCACGTCAAGCCGGATGAGCACGGGCTCCGTGAGGCCACCAAGATCACCGGGATaGTCTTCCTCTGGATGGGTG +
Preference number: 2 (lower is better)
Translates to: SLSLVSTSSRMSTGSVRPPRSPG*SSSGWV
Trigger: CACCCATCCAGAGGAAGACCATCCCGGTGATCTTGG...TGGCCTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR CCA 90 bp CCCAGGATCAGGGCAGTCTTGAGGCCAGTGAACTTGCCTAGCTCCTTAGTGAACCCGGTCTGGGCACTGTaGGTCTTGAGCCGCTCGAAC +
Preference number: 2 (lower is better)
Translates to: PRIRAVLRPVNLPSSLVNPVWAL*VLSRSN
Trigger: GTTCGAGCGGCTCAAGACCCACAGTGCCCAGACCGG...GTTCACTAAGGAGCTAGGCAAGTTCACTGGCCTCAAGACTGCCCTGATCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR TCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATGCTGTGGGCCTGCCATaGGGGGCACATAGCAAGCAC +
Preference number: 2 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNAVGLP*GAHSKH
Trigger: GTGCTTGCTATGTGCCCCTCATGGCAGGCCCACAGC...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACTTGCTGGCGAACTCCTaGACACCCTTCAAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHLLANS*TPFKAL
Trigger: CAGGGCCTTGAAGGGTGTGCAGGAGTTCGCCAGCAA...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp GGGCGTGGCAATAATTATGTCGGGATTTTCGTGCAGGGCTGCAAACTGGTCTTCGGAAGCAGGCTGTCTTaGCACTGCCCGTCCGGGCCA +
Preference number: 2 (lower is better)
Translates to: GRGNNYVGIFVQGCKLVFGSRLS*HCPSGP
Trigger: TGGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCC...GAAGACCAGTTTGCAGCCCTGCACGAAAATCCCGACATAATTATTGCCACGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGAGTAGACCGCACTCCTaGCCACCAGCAGTGCTCAAT +
Preference number: 2 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRSRPHS*PPAVLN
Trigger: ATTGAGCACTGCTGGTGGCCAGGAGTGCGGTCTACT...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CAA 90 bp CCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTaGGCCTGCCTGGCTTTGCTGGCGAACTCCTGCACACCCTTCAAG +
Preference number: 2 (lower is better)
Translates to: PEHMEAAAAELPTQV*ACLALLANSCTPFK
Trigger: CTTGAAGGGTGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR TCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCATGCAGCCATGACCTCTaGACCCAGAACACATGGAAG +
Preference number: 2 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPCSHDL*TQNTWK
Trigger: CTTCCATGTGTTCTGGGTTCAGAGGTCATGGCTGCA...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCACAGATGATGGCTCCTaGAGGGAGTGCCCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: NPEHMEAAAAELPTQVLATDDGS*RECPQC
Trigger: GCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGT...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGACAGATGATGGCTCCTaGAGGGAGTGCCCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQTDDGS*RECPQC
Trigger: GCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGT...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGGGGGTGTGGACTGAGTaGCTCTTCCTGAATCCGTTT +
Preference number: 2 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRGVWTE*LFLNPF
Trigger: AAACGGATTCAGGAAGAGCCACTCAGTCCACACCCC...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp TCAGCTTCATCGAACACCACGTATTCCACACTCTGCAGCTTCAGGCTCATTTCCTGCCCGTCCGGGCCATaGCCACCACGTCCTTGCCAT +
Preference number: 2 (lower is better)
Translates to: SASSNTTYSTLCSFRLISCPSGP*PPRPCH
Trigger: ATGGCAAGGACGTGGTGGCCATGGCCCGGACGGGCA...GGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGTGGTGTTCGATGAAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR TCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATGTCTCTGTCTTAGGCTaGCGCAGCTGCTGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNVSVLG*RSCCPS
Trigger: AGAAGGGCAGCAGCTGCGTCAGCCTAAGACAGAGAC...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATTGTGCCTGTTCAGAGTaGTGTGGGCCTGCCATGAGG +
Preference number: 2 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNCACSE*CGPAMR
Trigger: CCTCATGGCAGGCCCACAGCACTCTGAACAGGCACA...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp TGCTCGTTGAGCTTGGTATCCACGTCAAGCCGGATGAGCACGGGCTCCGTGAGGCTCCTGCAGCTGCTCTaGGAAACCCATTTCAAAAAG +
Preference number: 2 (lower is better)
Translates to: CSLSLVSTSSRMSTGSVRLLQLL*ETHFKK
Trigger: CTTTTTGAAATGGGTTTCGCAGAGCAGCTGCAGGAG...CCTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATACCAACTCCCGCCTCTaGCACCTGGTTTGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNTNSRL*HLVCAL
Trigger: CAGAGCACAAACCAGGTGCCAGAGGCGGGAGTTGGT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR TCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATGCTCCTTTTCACAGATaGTGGCTCCTGCAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNAPFHR*WLLQGV
Trigger: CACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGC...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATACTCAAGTCTTGGCCTaGCTGGCTTTGCTGGCGAAC +
Preference number: 2 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNTQVLA*LALLAN
Trigger: GTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTTGCCAACTCAAGTCTTaGCCTGCCTGGCTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPCQLKS*PAWLCW
Trigger: CCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCA...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATTGCCAACTCAAGTCTTaGCCTGCCTGGCTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNCQLKS*PAWLCW
Trigger: CCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCA...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp AGGCTCATTTCCACAGCCACATGCACCAACCGTCCGGGCGTGGCAATAATTATGGGGATGGTCTTCCTCTaGATGGGTGTTGGCACCTTG +
Preference number: 2 (lower is better)
Translates to: RLISTATCTNRPGVAIIMGMVFL*MGVGTL
Trigger: CAAGGTGCCAACACCCATCCAGAGGAAGACCATCCC...CATAATTATTGCCACGCCCGGACGGTTGGTGCATGTGGCTGTGGAAATGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR CCA 90 bp CATCGAACACCACGTATTCCACACTCTGCAGCTTCAGGCTCATTTCCACAGCCAGAGCCGCTCGAACATTaGGAGGAGGAAGCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: HRTPRIPHSAASGSFPQPEPLEH*EEEAGC
Trigger: ACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTC...TGGCTGTGGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGTGGTGTTCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR TCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAATGCAGCCATGACCTCTaGACCCAGAACACATGGAAG +
Preference number: 2 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKCSHDL*TQNTWK
Trigger: CTTCCATGTGTTCTGGGTTCAGAGGTCATGGCTGCA...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATCCTTGCCCCCTGGGCTaGGCATCCTGTTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYPCPLG*ASCSPP
Trigger: GGGAGGGGAACAGGATGCCCAGCCCAGGGGGCAAGG...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAATCCTCATTGGGAAGATaGGAGGGCTGTGCCTGTTCA +
Preference number: 2 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKSSLGR*EGCACS
Trigger: TGAACAGGCACAGCCCTCCCATCTTCCCAATGAGGA...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCTGGCACCTGGTTTGTaGTCTGAGCTTCACTTTCCT +
Preference number: 2 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNLAPGL*SELHFP
Trigger: AGGAAAGTGAAGCTCAGAGCACAAACCAGGTGCCAG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATGAGCAGCTGTGTCCTTaGCCCCTGGGCTGGGCATCC +
Preference number: 2 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYEQLCP*PLGWAS
Trigger: GGATGCCCAGCCCAGGGGGCAAGGACACAGCTGCTC...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCACTCCACTATGGACTCTaGCAGGTGAGGGGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPLHYGL*QVRGPA
Trigger: GGCTGGGCCCCTCACCTGGCAGAGTCCATAGTGGAG...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCATGTGTCCTTGCCCCCTaGGCTGGGCATCCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPCVLAP*AGHPVP
Trigger: GGGAACAGGATGCCCAGCCCAGGGGGCAAGGACACA...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp CATCGAACACCACGTATTCCACACTCTGCAGCTTCAGGCTCATTTCCACAGCCACCTCTGGATGGGTGTTaGCACCTTGTACCCCTTCTT +
Preference number: 2 (lower is better)
Translates to: HRTPRIPHSAASGSFPQPPLDGC*HLVPLL
Trigger: AAGAAGGGGTACAAGGTGCCAACACCCATCCAGAGG...TGGCTGTGGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGTGGTGTTCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR CCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTGGGATTTTAGTACCTaGGTCTCTCCATTCCAGTTC +
Preference number: 2 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNWDFST*VSPFQF
Trigger: GAACTGGAATGGAGAGACCCAGGTACTAAAATCCCA...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCATCTGACCTCCAGGTGTaGAGGGGCCGCGTTAACCTC +
Preference number: 2 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPSDLQV*RGRVNL
Trigger: GAGGTTAACGCGGCCCCTCCACACCTGGAGGTCAGA...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATAGGCCCCCTCCACTATaGACTCTGCCAGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYRPPPL*TLPGEG
Trigger: CCCCTCACCTGGCAGAGTCCATAGTGGAGGGGGCCT...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAATCTGTGGCCATACAGTaGTCCTTTTCACAGATGATG +
Preference number: 2 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKSVAIQ*SFSQMM
Trigger: CATCATCTGTGAAAAGGAGCACTGTATGGCCACAGA...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATTCTGTGGCCATACAGTaGTCCTTTTCACAGATGATG +
Preference number: 2 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNSVAIQ*SFSQMM
Trigger: CATCATCTGTGAAAAGGAGCACTGTATGGCCACAGA...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATTGGCCTGCCTGGCTTTaGTGGCGAACTCCTGCACAC +
Preference number: 2 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYWPAWL*WRTPAH
Trigger: GTGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCA...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATTTCCTCATCGCTAAATaGACAAGGCAGCAGAACTCA +
Preference number: 2 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNFLIAK*TRQQNS
Trigger: TGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGAA...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR TCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCATGCTGGGGCTGCCCTTaGCCTTCTCAGAACCTCAAA +
Preference number: 2 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPCWGCP*PSQNLK
Trigger: TTTGAGGTTCTGAGAAGGTCAAGGGCAGCCCCAGCA...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAACTCAAGTCTTGGCCTaGCTGGCTTTGCTGGCGAAC +
Preference number: 2 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPTQVLA*LALLAN
Trigger: GTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGT...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAACCTGGCCACCAGCAGTaGTCAATAAAGATTTATTAC +
Preference number: 2 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKPGHQQ*SIKIYY
Trigger: GTAATAAATCTTTATTGAGCACTGCTGGTGGCCAGG...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATTGTGCCTGTTCAGAGTaGTGTGGGCCTGCCATGAGG +
Preference number: 2 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYCACSE*CGPAMR
Trigger: CCTCATGGCAGGCCCACAGCACTCTGAACAGGCACA...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAACCTCAAACAGGGGGTaGGTGGCAAGAAGACAGAGG +
Preference number: 2 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPTSNRG*VARRQR
Trigger: CCTCTGTCTTCTTGCCACCCACCCCCTGTTTGAGGT...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR TCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATCAATGGGGTGTGGACTaGGTGGCTCTTCCTGAATCC +
Preference number: 2 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYQWGVD*VALPES
Trigger: GGATTCAGGAAGAGCCACTCAGTCCACACCCCATTG...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGACCCGCAACTCCTCTaGCACGTTAGCTGGGATTTT +
Preference number: 2 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPDPQLL*HVSWDF
Trigger: AAAATCCCAGCTAACGTGGCAGAGGAGTTGCGGGTC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR TCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATCAACTGCCTCTAAAATaGGATCAGACCAGGCCCTCC +
Preference number: 2 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYQLPLK*DQTRPS
Trigger: GGAGGGCCTGGTCTGATCTCATTTTAGAGGCAGTTG...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATCTCTGCCACGTTAGCTaGGATTTTAGTACCTGGGTC +
Preference number: 2 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYLCHVS*DFSTWV
Trigger: GACCCAGGTACTAAAATCCCAGCTAACGTGGCAGAG...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 72 bp CGGGTCGGCGAGAGGATGAGGGCGCGGGCCCCGGTCTaGGCACTGTGGGTCTTGAGCCGCTCGAACATTGGG +
Preference number: 3 (lower is better)
Translates to: RVGERMRARAPV*ALWVLSRSNIG
Trigger: CCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCATCCTCTCGCCGACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CCA 72 bp AGCAGTTTGGGCAGCGTGGCGGAGAACAGCACCGTCTaGTGGCCCCCGGGGAGGCGGGCGATGATCTCCTGC +
Preference number: 3 (lower is better)
Translates to: SSLGSVAENSTV*WPPGRRAMISC
Trigger: GCAGGAGATCATCGCCCGCCTCCCCGGGGGCCACCAGACGGTGCTGTTCTCCGCCACGCTGCCCAAACTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR GCA 72 bp GCCGCTCGAACATTGGGAGGAGGAAGCAGGCTGTCTTaGCACTGCCCGTCCGGGCCATGGCCACCACGTCCT +
Preference number: 3 (lower is better)
Translates to: AARTLGGGSRLS*HCPSGPWPPRP
Trigger: AGGACGTGGTGGCCATGGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CCA 72 bp GAGAGGATGAGGGCGCGGGCCCCGGTCTGGGCACTGTaGGTCTTGAGCCGCTCGAACATTGGGAGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: ERMRARAPVWAL*VLSRSNIGRRK
Trigger: CTTCCTCCTCCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCATCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CCA 72 bp GGAAGCAGGCTGTCTTGCCACTGCCCGTCCGGGCCATaGCCACCACGTCCTTGCCATCCAAGATCACCGGGA +
Preference number: 3 (lower is better)
Translates to: GSRLSCHCPSGP*PPRPCHPRSPG
Trigger: TCCCGGTGATCTTGGATGGCAAGGACGTGGTGGCCATGGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR TCA 72 bp ACAGCACCGTCTGGTGGCCCCCGGGGAGGCGGGCGATaGTCTCCTGCAGCTGCTCTGCGAAACCCATTTCAA +
Preference number: 3 (lower is better)
Translates to: TAPSGGPRGGGR*SPAAALRNPFQ
Trigger: TTGAAATGGGTTTCGCAGAGCAGCTGCAGGAGATCATCGCCCGCCTCCCCGGGGGCCACCAGACGGTGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR GCA 72 bp CGAACATTGGGAGGAGGAAGCAGGCTGTCTTGCCACTaGCCGTCCGGGCCATGGCCACCACGTCCTTGCCAT +
Preference number: 3 (lower is better)
Translates to: RTLGGGSRLSCH*PSGPWPPRPCH
Trigger: ATGGCAAGGACGTGGTGGCCATGGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCCTCCTCCCAATGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR GCA 72 bp GTGAACTTGCCTAGCTCCTTAGTGAACTTCAGGGTCTaGAGGGCCAGCTCTCGGGTCGGCGAGAGGATGAGG +
Preference number: 3 (lower is better)
Translates to: VNLPSSLVNFRV*RASSRVGERMR
Trigger: CCTCATCCTCTCGCCGACCCGAGAGCTGGCCCTGCAGACCCTGAAGTTCACTAAGGAGCTAGGCAAGTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR GCA 72 bp CCCGGGGAGGCGGGCGATGATCTCCTGCAGCTGCTCTaGGAAACCCATTTCAAAAAGCCGGTCAGCTTCATC +
Preference number: 3 (lower is better)
Translates to: PGEAGDDLLQLL*ETHFKKPVSFI
Trigger: GATGAAGCTGACCGGCTTTTTGAAATGGGTTTCGCAGAGCAGCTGCAGGAGATCATCGCCCGCCTCCCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR CAA 90 bp TCATCGAACACCACGTATTCCACACTCTGCAGCTTCAGGCTCATTTCCACAGCCAGGAAGCAGGCTGTCTaGCCACTGCCCGTCCGGGCC +
Preference number: 3 (lower is better)
Translates to: SSNTTYSTLCSFRLISTARKQAV*PLPVRA
Trigger: GGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCCT...GGCTGTGGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGTGGTGTTCGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR GCA 72 bp CTGAGTTGCCAACTCAAGTCTTGGCCTGCCTGGCTTTaGTGGCGAACTCCTGCACACCCTTCAAGGCCCTGT +
Preference number: 3 (lower is better)
Translates to: LSCQLKSWPAWL*WRTPAHPSRPC
Trigger: ACAGGGCCTTGAAGGGTGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCAACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 72 bp TGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTaGCCTGCCTGGCTTTGCTGGCGAACTCCTGCACAC +
Preference number: 3 (lower is better)
Translates to: WKQQQLSCQLKS*PAWLCWRTPAH
Trigger: GTGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CAA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACTTGCCAACTCAAGTCTaGGCCTGCCTGGCTTTGCTG +
Preference number: 3 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHLPTQV*ACLALL
Trigger: CAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCAA...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 72 bp AGTTGCCAACTCAAGTCTTGGCCTGCCTGGCTTTGCTaGCGAACTCCTGCACACCCTTCAAGGCCCTGTTCA +
Preference number: 3 (lower is better)
Translates to: SCQLKSWPAWLC*RTPAHPSRPCS
Trigger: TGAACAGGGCCTTGAAGGGTGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 72 bp GTGGCTCTTCCTGAATCCGTTTCCTCATTGGGAAGATaGGAGGGCTGTGCCTGTTCAGAGTGCTGTGGGCCT +
Preference number: 3 (lower is better)
Translates to: VALPESVSSLGR*EGCACSECCGP
Trigger: AGGCCCACAGCACTCTGAACAGGCACAGCCCTCCCATCTTCCCAATGAGGAAACGGATTCAGGAAGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CAA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTCTGCTGGGGCTGCCCTaGACCTTCTCAGAACCTCAA +
Preference number: 3 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPLLGLP*TFSEPQ
Trigger: TTGAGGTTCTGAGAAGGTCAAGGGCAGCCCCAGCAG...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR GCA 72 bp CAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTaGCACGTTAGCTGGGATTTTAGTACCTGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: QQNSPSGDPQLL*HVSWDFSTWVS
Trigger: AGAGACCCAGGTACTAAAATCCCAGCTAACGTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 72 bp CCCTCAGGAGACCCGCAACTCCTCTGCCACGTTAGCTaGGATTTTAGTACCTGGGTCTCTCCATTCCAGTTC +
Preference number: 3 (lower is better)
Translates to: PSGDPQLLCHVS*DFSTWVSPFQF
Trigger: GAACTGGAATGGAGAGACCCAGGTACTAAAATCCCAGCTAACGTGGCAGAGGAGTTGCGGGTCTCCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 72 bp CGAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTaGGAAGGTTGGCCTGAGGCTTTCAAAACCCAGAAC +
Preference number: 3 (lower is better)
Translates to: RGSCEGVCSRSS*EGWPEAFKTQN
Trigger: GTTCTGGGTTTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CAA 90 bp TCAGCTTCATCGAACACCACGTATTCCACACTCTGCAGCTTCAGGCTCATTTCCATGGCCACCACGTCCTaGCCATCCAAGATCACCGGG +
Preference number: 3 (lower is better)
Translates to: SASSNTTYSTLCSFRLISMATTS*PSKITG
Trigger: CCCGGTGATCTTGGATGGCAAGGACGTGGTGGCCAT...GGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGTGGTGTTCGATGAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR TCA 72 bp AATTGGATAGTGCAGGTGACAGCAGCGAGGAAGCTGTaGAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: NWIVQVTAARKL*RCLLTQQLGRL
Trigger: CAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTCGCTGCTGTCACCTGCACTATCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR GCA 72 bp CGTCCGGGCGTGGCAATAATTATGTCGGGATTTTCGTaGAGGGCTGCAAACTGGTCTTCCATCCTGTCTCCA +
Preference number: 3 (lower is better)
Translates to: RPGVAIIMSGFS*RAANWSSILSP
Trigger: TGGAGACAGGATGGAAGACCAGTTTGCAGCCCTGCACGAAAATCCCGACATAATTATTGCCACGCCCGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR GCA 72 bp ACACTCTGCAGCTTCAGGCTCATTTCCACAGCCACATaGACCAACCGTCCGGGCGTGGCAATAATTATGTCG +
Preference number: 3 (lower is better)
Translates to: TLCSFRLISTAT*TNRPGVAIIMS
Trigger: CGACATAATTATTGCCACGCCCGGACGGTTGGTGCATGTGGCTGTGGAAATGAGCCTGAAGCTGCAGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR-3UTR CAA 90 bp ATCTCCTGCAGCTGCTCTGCGAAACCCATTTCAAAAAGCCGGTCAGCTTCATCGAGGATCAGGGCAGTCTaGAGGCCAGTGAACTTGCCT +
Preference number: 3 (lower is better)
Translates to: ISCSCSAKPISKSRSASSRIRAV*RPVNLP
Trigger: AGGCAAGTTCACTGGCCTCAAGACTGCCCTGATCCT...CGATGAAGCTGACCGGCTTTTTGAAATGGGTTTCGCAGAGCAGCTGCAGGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR TCA 72 bp CTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATaGGAGATCACCAAGGCCCCCTCCACTATGGACTCT +
Preference number: 3 (lower is better)
Translates to: LFVRSQNRVHAR*EITKAPSTMDS
Trigger: AGAGTCCATAGTGGAGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR TCA 72 bp AGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTaGGGCTTTCAAAACCCAGAACGGTTTAGGATCTCA +
Preference number: 3 (lower is better)
Translates to: RCLLTQQLGRLA*GFQNPERFRIS
Trigger: TGAGATCCTAAACCGTTCTGGGTTTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 72 bp GTTTGTGCTCTGAGCTTCACTTTCCTCATCGCTAAATaGACAAGGCAGCAGAACTCACCCTCAGGAGACCCG +
Preference number: 3 (lower is better)
Translates to: VCALSFTFLIAK*TRQQNSPSGDP
Trigger: CGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGAAAGTGAAGCTCAGAGCACAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CCA 72 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTaGCCTGAGGCTTTCAAAACCCAGAACGGTTTAGGA +
Preference number: 3 (lower is better)
Translates to: CEGVCSRSSWEG*PEAFKTQNGLG
Trigger: TCCTAAACCGTTCTGGGTTTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR-3UTR CAA 90 bp TCAGCTTCATCGAACACCACGTATTCCACACTCTGCAGCTTCAGGCTCATTTCCTCCTCTGGATGGGTGTaGGCACCTTGTACCCCTTCT +
Preference number: 3 (lower is better)
Translates to: SASSNTTYSTLCSFRLISSSGWV*APCTPS
Trigger: AGAAGGGGTACAAGGTGCCAACACCCATCCAGAGGA...GGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGTGGTGTTCGATGAAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR GCA 72 bp CGTGGCAATAATTATGTCGGGATTTTCGTGCAGGGCTaGAAACTGGTCTTCCATCCTGTCTCCACCCAGGAT +
Preference number: 3 (lower is better)
Translates to: RGNNYVGIFVQG*KLVFHPVSTQD
Trigger: ATCCTGGGTGGAGACAGGATGGAAGACCAGTTTGCAGCCCTGCACGAAAATCCCGACATAATTATTGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CCA 72 bp CAAGATCACCGGGATGGTCTTCCTCTGGATGGGTGTTaGCACCTTGTACCCCTTCTTCATGATGCCTTTGAA +
Preference number: 3 (lower is better)
Translates to: QDHRDGLPLDGC*HLVPLLHDAFE
Trigger: TTCAAAGGCATCATGAAGAAGGGGTACAAGGTGCCAACACCCATCCAGAGGAAGACCATCCCGGTGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR TCA 72 bp GGAGATAAGAGTAGGTCACAAACCAATGAATATGACTaGTCCAGTTACAAGAAAATAAAGCTGATTGATGTA +
Preference number: 3 (lower is better)
Translates to: GDKSRSQTNEYD*SSYKKIKLIDV
Trigger: TACATCAATCAGCTTTATTTTCTTGTAACTGGATCAGTCATATTCATTGGTTTGTGACCTACTCTTATCTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GTCGGCGAGAGGATGAGGGCGCGGGCCCCGGTCTGGGCACTGTGGGTCTTGAGCAACAGCACCGTCTGGTaGCCCCCGGGGAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: VGERMRARAPVWALWVLSNSTVW*PPGRRA
Trigger: CGCCCGCCTCCCCGGGGGCCACCAGACGGTGCTGTT...GCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCATCCTCTCGCCGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp TTCAGGGTCTGCAGGGCCAGCTCTCGGGTCGGCGAGAGGATGAGGGCGCGGGCCGGAAGCAGGCTGTCTTaGCACTGCCCGTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: FRVCRASSRVGERMRARAGSRLS*HCPSGP
Trigger: TGGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCC...GGCCCGCGCCCTCATCCTCTCGCCGACCCGAGAGCTGGCCCTGCAGACCCTGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp GTCGGCGAGAGGATGAGGGCGCGGGCCCCGGTCTGGGCACTGTGGGTCTTGAGCTGCCCGTCCGGGCCATaGCCACCACGTCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: VGERMRARAPVWALWVLSCPSGP*PPRPCH
Trigger: ATGGCAAGGACGTGGTGGCCATGGCCCGGACGGGCA...GCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCATCCTCTCGCCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACCCCTGCTGCAGCTCCTaGACGCGGCGGCGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDPCCSS*TRRRLR
Trigger: CCGCAACCGCCGCCGCGTCCAGGAGCTGCAGCAGGG...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCGGGGTGCCTGGGGCGTaGGGCCGGGATGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGGVPGA*GRDAPW
Trigger: CCAAGGTGCATCCCGGCCCCACGCCCCAGGCACCCC...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306014.10
CDS-3UTR TCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCGAGGGCGCCGGGCGTaGGCGCACATACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGRGRRA*AHILLL
Trigger: CAGCAGCAGTATGTGCGCTCACGCCCGGCGCCCTCG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCGGCGTGGGGCCGGGATaGACCTGCTTGGCCACGGTC +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGGVGPG*TCLATV
Trigger: GACCGTGGCCAAGCAGGTGCATCCCGGCCCCACGCC...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314045.11
CDS-3UTR GCA 90 bp GGTCGGCGAGAGGATGAGGGCGCGGGCCCCGGTCTGGGCACTGTGGGTCTTGAGATTTCCACAGCCACATaGACCAACCGTCCGGGCGTG +
Preference number: 4 (lower is better)
Translates to: GRREDEGAGPGLGTVGLEISTAT*TNRPGV
Trigger: CACGCCCGGACGGTTGGTGCATGTGGCTGTGGAAAT...CTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCATCCTCTCGCCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACTGCTCCTGCCGCCCCTaGTGTCCCTGCTGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDCSCRP*CPCWKR
Trigger: CCGCTTCCAGCAGGGACAGCAGGGGCGGCAGGAGCA...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCCACGCTGCAGGAAGTaGAGCTTCTGGGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGPRCRK*SFWARR
Trigger: GCGCCGGGCCCAGAAGCTGCACTTCCTGCAGCGTGG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCCCGAAGGCGCCCTGCTaGAGCTCCTGGACGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAPKAPC*SSWTRR
Trigger: CCGCCGCGTCCAGGAGCTGCAGCAGGGCGCCTTCGG...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CAA 72 bp AGCCGCTCGAACATTGGGAGGAGGAAGCAGGCTGTCTaGCCACTGCCCGTCCGGGCCATGGCCACCACGTCC +
Preference number: 4 (lower is better)
Translates to: SRSNIGRRKQAV*PLPVRAMATTS
Trigger: GGACGTGGTGGCCATGGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
3UTR CAA 72 bp ATGAGGGCGCGGGCCCCGGTCTGGGCACTGTGGGTCTaGAGCCGCTCGAACATTGGGAGGAGGAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: MRARAPVWALWV*SRSNIGRRKQA
Trigger: AGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR TCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACTCTTACGGTCCCACTTaGGCTGCTGCCGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDSYGPT*AAAGPS
Trigger: CGAGGGGCCGGCAGCAGCTCAAGTGGGACCGTAAGA...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GAACTTCAGGGTCTGCAGGGCCAGCTCTCGGGTCGGCGAGAGGATGAGGGCGCGGTGAACTTCAGGGTCTaGAGGGCCAGCTCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: ELQGLQGQLSGRREDEGAVNFRV*RASSRV
Trigger: GACCCGAGAGCTGGCCCTGCAGACCCTGAAGTTCAC...CGCGCCCTCATCCTCTCGCCGACCCGAGAGCTGGCCCTGCAGACCCTGAAGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCGCGCATCACCTGGCTaGACAGGTCTCGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGRASPG*TGLGWR
Trigger: CCTCCAGCCGAGACCTGTGCAGCCAGGTGATGCGCG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACCGCGCATCACCTGGCTaGACAGGTCTCGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDRASPG*TGLGWR
Trigger: CCTCCAGCCGAGACCTGTGCAGCCAGGTGATGCGCG...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACTCAGGCTGCTTCTCCTaGAGTGCTGGGCGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDSGCFS*SAGRLG
Trigger: CCCGAGCCGCCCAGCACTGCAGGAGAAGCAGCCTGA...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACGCGCCAGCTGCCTGCTaGTCAAAGGCTCCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDAPAAC*SKAPPS
Trigger: GGAAGGGGGAGCCTTTGAGCAGCAGGCAGCTGGCGC...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCACGGCCGAAGGCGCCCTaGTGCAGCTCCTGGACGCGG +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPRPKAP*CSSWTR
Trigger: CCGCGTCCAGGAGCTGCAGCAGGGCGCCTTCGGCCG...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACGAGCAGCTGTGTCCTTaGCCCCTGGGCTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDEQLCP*PLGWAS
Trigger: GGATGCCCAGCCCAGGGGGCAAGGACACAGCTGCTC...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GGTCGGCGAGAGGATGAGGGCGCGGGCCCCGGTCTGGGCACTGTGGGTCTTGAGCCAAGATCACCGGGATaGTCTTCCTCTGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: GRREDEGAGPGLGTVGLEPRSPG*SSSGWV
Trigger: CACCCATCCAGAGGAAGACCATCCCGGTGATCTTGG...CTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCATCCTCTCGCCGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCGAGAACAGCACCGTCTaGTGGCCCCCGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAENSTV*WPPGRR
Trigger: CCGCCTCCCCGGGGGCCACCAGACGGTGCTGTTCTC...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCACCACGGTCTGGTCCTaGGGCCGCACCACGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGTTVWS*GRTTLC
Trigger: GCACAACGTGGTGCGGCCCCAGGACCAGACCGTGGT...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCCCTGCTGTCCCTGCTaGAAGCGGGCGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGPCCPC*KRAMAL
Trigger: CAAGGCCATCGCCCGCTTCCAGCAGGGACAGCAGGG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGGGGGTGCCTGGGGCGTaGGGCCGGGATGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRGVPGA*GRDAPA
Trigger: AGCAGGTGCATCCCGGCCCCACGCCCCAGGCACCCC...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314045.11
CDS-3UTR CCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACGCATCTTGCCCTTCTTaGAGCGGGCACCCCGGCCGA +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDASCPS*SGHPGR
Trigger: TCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGC...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCGGCCGGGATGCACCTTaGCCACGGTCTCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGGRDAP*PRSRFP
Trigger: TGGGAAGCGAGACCGTGGCCAAGGTGCATCCCGGCC...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306014.10
CDS-3UTR TCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCATCCCCTGTTGGGTCCTaGCCGCTGCCGCTTCCGGCC +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPSPVGS*PLPLPA
Trigger: GGCCGGAAGCGGCAGCGGTCAGGACCCAACAGGGGA...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCCAAGGAGTAGGCTGTaGCACTTCGGCCAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGPRSRL*HFGQPE
Trigger: CTCGGGCTGGCCGAAGTGGCACAGCCTACTCCTTGG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCACGCCCCTGCTGTCCCTaGTGGAAGCGGGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPRPCCP*WKRAMA
Trigger: GGCCATCGCCCGCTTCCAGCAGGGACAGCAGGGGCG...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TTCAGGGTCTGCAGGGCCAGCTCTCGGGTCGGCGAGAGGATGAGGGCGCGGGCCTGGTCTTCCTCTGGATaGGTGTTGGCACCTTGTACC +
Preference number: 4 (lower is better)
Translates to: FRVCRASSRVGERMRARAWSSSG*VLAPCT
Trigger: GGTACAAGGTGCCAACACCCATCCAGAGGAAGACCA...GGCCCGCGCCCTCATCCTCTCGCCGACCCGAGAGCTGGCCCTGCAGACCCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCCGGTCTGGGCACTGTaGGTCTTGAGCCGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGPVWAL*VLSRSN
Trigger: GTTCGAGCGGCTCAAGACCCACAGTGCCCAGACCGG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CTGTGGGTCTTGAGCCGCTCGAACATTGGGAGGAGGAAGCAGGCTGTCTTGCCAGCGCGGGCCCCGGTCTaGGCACTGTGGGTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LWVLSRSNIGRRKQAVLPARAPV*ALWVLS
Trigger: GCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGC...TGGCAAGACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTCAAGACCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACGTCCACCACACTCTGTaGCACCCGACCCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDVHHTL*HPTQHA
Trigger: GGCATGCTGGGTCGGGTGCCACAGAGTGTGGTGGAC...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCTTGGCGCGCATCACCTaGCTGCACAGGTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGLARIT*LHRSRL
Trigger: CAGCCGAGACCTGTGCAGCCAGGTGATGCGCGCCAA...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACCCGCGTGTTGAGGGGTaGGGGCTGGACAGTGACTCT +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDPRVEG*GLDSDS
Trigger: AGAGTCACTGTCCAGCCCCCACCCCTCAACACGCGG...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCTCGTCAGCAGCTCAGTaGGGTACTCGGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGSSAAQ*GTRRGA
Trigger: AGCACCACGCCGAGTACCTCACTGAGCTGCTGACGA...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCACACCGGCCACACCTaGGGGCTCCTTGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRHTGHT*GLLEGS
Trigger: CGACCCCTCAAGGAGCCCTCAGGTGTGGCCGGTGTG...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACCGAGGGCGCCGGGCGTaGGCGCACATACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHRGRRA*AHILLL
Trigger: CAGCAGCAGTATGTGCGCTCACGCCCGGCGCCCTCG...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACGCCCTGATGAGGAGGTaGTGGGAAGGTCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDALMRR*WEGQGA
Trigger: AGCCCCTTGACCTTCCCATCACCTCCTCATCAGGGC...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACGTGAACTTCAGGGTCTaGAGGGCCAGCTCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDVNFRV*RASSRV
Trigger: GACCCGAGAGCTGGCCCTGCAGACCCTGAAGTTCAC...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCACACGGCCCACGCGGTaGAGGAAGAGTTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGTRPTR*RKSLPL
Trigger: CAAGGGCAAACTCTTCCTGCACCGCGTGGGCCGTGT...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTGCTTCTCCTGCAGTaGTGGGCGGCTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRLLLLQ*WAARGW
Trigger: CCAGCCCCGAGCCGCCCAGCACTGCAGGAGAAGCAG...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCATTGGGTCCTGACCGCTaGCGCTTCCGGCCCACGACC +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPLGPDR*RFRPTT
Trigger: GGTCGTGGGCCGGAAGCGGCAGCGGTCAGGACCCAA...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACCCGAAGGCGCCCTGCTaGAGCTCCTGGACGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNPKAPC*SSWTRR
Trigger: CCGCCGCGTCCAGGAGCTGCAGCAGGGCGCCTTCGG...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCCATGCAGGACCTCTCTaGCATGCTGGCCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAHAGPL*HAGRPG
Trigger: CCCAGGCCGGCCAGCATGGCAGAGAGGTCCTGCATG...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GTGAACTTGCCTAGCTCCTTAGTGAACTTCAGGGTCTGCAGGGCCAGCTCTCGGGAGAACAGCACCGTCTaGTGGCCCCCGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VNLPSSLVNFRVCRASSRENSTV*WPPGRR
Trigger: CCGCCTCCCCGGGGGCCACCAGACGGTGCTGTTCTC...CCGAGAGCTGGCCCTGCAGACCCTGAAGTTCACTAAGGAGCTAGGCAAGTTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCGCAGTTTGGGCAGCGTaGCGGAGAACAGCACCGTCT +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGAVWAA*RRTAPS
Trigger: AGACGGTGCTGTTCTCCGCCACGCTGCCCAAACTGC...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCGCGCAGCTCACCCGCTaGGTCGTCAGCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAAQLTR*VVSSSV
Trigger: CACTGAGCTGCTGACGACCCAGCGGGTGAGCTGCGC...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCAGGAAGTGCAGCTTCTaGGCCCGGCGCCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGARKCSF*ARRRCF
Trigger: GAAGCAGCGGCGCCGGGCCCAGAAGCTGCACTTCCT...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCACCTTGCCCCCTGGGCTaGGCATCCTGTTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPPCPLG*ASCSPP
Trigger: GGGAGGGGAACAGGATGCCCAGCCCAGGGGGCAAGG...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACCGGGGAGGCGGGCGATaGTCTCCTGCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHRGGGR*SPAAAL
Trigger: CAGAGCAGCTGCAGGAGATCATCGCCCGCCTCCCCG...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATGGGGTCGGGCGAGGGTaGGGGAGCGGCCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNGVGRG*GSGPGT
Trigger: TGTTCCTGGGCCGCTCCCTCACCCTCGCCCGACCCC...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGGGGGTCGGGCGAGGGTaGGGGAGCGGCCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQGVGRG*GSGPGT
Trigger: TGTTCCTGGGCCGCTCCCTCACCCTCGCCCGACCCC...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACTCCATTGCCAAACCCTaGGGCACTCAGGGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDSIAKP*GTQGSD
Trigger: GTCAGAGCCCTGAGTGCCTCAGGGTTTGGCAATGGA...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCAGGGTCCATGCTAGATaGGAGATCACCAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGRVHAR*EITKAP
Trigger: GGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCT...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCAAGGCTGTCTTGCCACTaGCCGTCCGGGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPRLSCH*PSGPWP
Trigger: TGGCCATGGCCCGGACGGGCAGTGGCAAGACAGCCT...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAGGAAGCAGGCTGTCTTaGCACTGCCCGTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPGSRLS*HCPSGP
Trigger: TGGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCC...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TTCAGGGTCTGCAGGGCCAGCTCTCGGGTCGGCGAGAGGATGAGGGCGCGGGCCCTCCTGCAGCTGCTCTaGGAAACCCATTTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: FRVCRASSRVGERMRARALLQLL*ETHFKK
Trigger: CTTTTTGAAATGGGTTTCGCAGAGCAGCTGCAGGAG...GGCCCGCGCCCTCATCCTCTCGCCGACCCGAGAGCTGGCCCTGCAGACCCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCAGGCCGCACCACGTTGTaGAGCAGGTGGAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPGRTTL*SRWSST
Trigger: CGTGCTGCTCCACCTGCTGCACAACGTGGTGCGGCC...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGGAGCTGAAGAGGGGGTaGAGGCCCAGCCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRELKRG*RPSPTR
Trigger: CCTTGTGGGGCTGGGCCTGCACCCCCTCTTCAGCTC...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGGCCTTGCGGTCCTTCTaGCGCTTGGCGCGCATCACC +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRALRSF*RLARIT
Trigger: GGTGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGC...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACCGCCCCTGCTGTCCCTaGTGGAAGCGGGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNRPCCP*WKRAMA
Trigger: GGCCATCGCCCGCTTCCAGCAGGGACAGCAGGGGCG...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACCTGCTTCTCCTGCAGTaGTGGGCGGCTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHLLLLQ*WAARGW
Trigger: CCAGCCCCGAGCCGCCCAGCACTGCAGGAGAAGCAG...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCATCAGGCTGCTTCTCCTaGAGTGCTGGGCGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPSGCFS*SAGRLG
Trigger: CCCGAGCCGCCCAGCACTGCAGGAGAAGCAGCCTGA...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCGCCTCGCCGGTCAGATaGCCCTTCTTCGTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAASPVR*PFFVRV
Trigger: GACTCGGACGAAGAAGGGGCATCTGACCGGCGAGGC...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCGGCCGAAGGCGCCCTaGTGCAGCTCCTGGACGCGG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNRPKAP*CSSWTR
Trigger: CCGCGTCCAGGAGCTGCAGCAGGGCGCCTTCGGCCG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGTGCCCGTCCGGGCCATaGCCACCACGTCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRCPSGP*PPRPCH
Trigger: ATGGCAAGGACGTGGTGGCCATGGCCCGGACGGGCA...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCGAGCCGCTCGAACATTaGGAGGAGGAAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGEPLEH*EEEAGC
Trigger: ACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTC...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCAACAGCACCGTCTGGTaGCCCCCGGGGAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLANSTVW*PPGRRA
Trigger: CGCCCGCCTCCCCGGGGGCCACCAGACGGTGCTGTT...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTAACAGCACCGTCTGGTaGCCCCCGGGGAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPNSTVW*PPGRRA
Trigger: CGCCCGCCTCCCCGGGGGCCACCAGACGGTGCTGTT...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACAAACACCACGGTCTaGTCCTGGGGCCGCACCACG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGATNTTV*SWGRTT
Trigger: CGTGGTGCGGCCCCAGGACCAGACCGTGGTGTTTGT...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCCCTGCTGTCCCTGCTaGAAGCGGGCGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRPCCPC*KRAMAL
Trigger: CAAGGCCATCGCCCGCTTCCAGCAGGGACAGCAGGG...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTCCCTGCTGCAGCTCCTaGACGCGGCGGCGGTTGCGG +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPPCCSS*TRRRLR
Trigger: CCGCAACCGCCGCCGCGTCCAGGAGCTGCAGCAGGG...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TGCTCGTTGAGCTTGGTATCCACGTCAAGCCGGATGAGCACGGGCTCCGTGAGGGGGCACTGTGGGTCTTaGGCCGCTCGAACATTGGGA +
Preference number: 4 (lower is better)
Translates to: CSLSLVSTSSRMSTGSVRGHCGS*AARTLG
Trigger: TCCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCC...CCTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR TCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATTCCCCTGTTGGGTCCTaGCCGCTGCCGCTTCCGGCC +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNSPVGS*PLPLPA
Trigger: GGCCGGAAGCGGCAGCGGTCAGGACCCAACAGGGGA...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGTCTGCTGCTTGGTCTTaGGTTCCGGGCGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRSAAWS*VPGGLG
Trigger: GCCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGA...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACTGCTGGGGCTGCCCTTaGCCTTCTCAGAACCTCAAA +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDCWGCP*PSQNLK
Trigger: TTTGAGGTTCTGAGAAGGTCAAGGGCAGCCCCAGCA...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCGCAGCGAGGAAGCTGTaGAGGTGTCTGCTCACGCAG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAAARKL*RCLLTQ
Trigger: CTGCGTGAGCAGACACCTTCACAGCTTCCTCGCTGC...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACAGGCTGTCTTGCCACTaGCCGTCCGGGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHRLSCH*PSGPWP
Trigger: TGGCCATGGCCCGGACGGGCAGTGGCAAGACAGCCT...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CTGCTCGTTGAGCTTGGTATCCACGTCAAGCCGGATGAGCACGGGCTCCGTGAGCGGGCGATGATCTCCTaGAGCTGCTCTGCGAAACCC +
Preference number: 4 (lower is better)
Translates to: LLVELGIHVKPDEHGLRERAMIS*SCSAKP
Trigger: GGGTTTCGCAGAGCAGCTGCAGGAGATCATCGCCCG...CTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACACGGCCCACGCGGTaGAGGAAGAGTTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGATRPTR*RKSLPL
Trigger: CAAGGGCAAACTCTTCCTGCACCGCGTGGGCCGTGT...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACGAGCAGCTGTGTCCTTaGCCCCTGGGCTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHEQLCP*PLGWAS
Trigger: GGATGCCCAGCCCAGGGGGCAAGGACACAGCTGCTC...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCACTCCACTATGGACTCTaGCAGGTGAGGGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPLHYGL*QVRGPA
Trigger: GGCTGGGCCCCTCACCTGGCAGAGTCCATAGTGGAG...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCACTCCACTATGGACTCTaGCAGGTGAGGGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPLHYGL*QVRGPA
Trigger: GGCTGGGCCCCTCACCTGGCAGAGTCCATAGTGGAG...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACCATGCAGGACCTCTCTaGCATGCTGGCCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHHAGPL*HAGRPG
Trigger: CCCAGGCCGGCCAGCATGGCAGAGAGGTCCTGCATG...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACTCCTCCACTGGGCCATaGCAGCTCGCGACCGAGGTC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHSSTGP*QLATEV
Trigger: GACCTCGGTCGCGAGCTGCCATGGCCCAGTGGAGGA...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAGCGCGGGCCCCGGTCTaGGCACTGTGGGTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKARAPV*ALWVLS
Trigger: GCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGC...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTGCGCGGGCCCCGGTCTaGGCACTGTGGGTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPARAPV*ALWVLS
Trigger: GCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGC...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACATTCCACCAGCAGTTTaGGCAGCGTGGCGGAGAACA +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDIPPAV*AAWRRT
Trigger: TGTTCTCCGCCACGCTGCCCAAACTGCTGGTGGAAT...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGTTGGCGCGCATCACCTaGCTGCACAGGTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRLARIT*LHRSRL
Trigger: CAGCCGAGACCTGTGCAGCCAGGTGATGCGCGCCAA...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACGCTGGAAGCGGGCGATaGCCTTGCGGTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHAGSGR*PCGPSA
Trigger: GGCAGAAGGACCGCAAGGCCATCGCCCGCTTCCAGC...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCATCTTGGCTCCCCTGTTaGGTCCTGACCGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPSWLPC*VLTAAA
Trigger: AGCGGCAGCGGTCAGGACCCAACAGGGGAGCCAAGA...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACCGCTGTCAAAGTCCTTaGGCCGGTAGGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDRCQSP*AGRGCR
Trigger: TCTACATCCCCTACCGGCCCAAGGACTTTGACAGCG...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCGCTGTCAAAGTCCTTaGGCCGGTAGGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGRCQSP*AGRGCR
Trigger: TCTACATCCCCTACCGGCCCAAGGACTTTGACAGCG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACACCTCTCTGCCATGCTaGCCGGCCTGGGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHTSLPC*PAWVRL
Trigger: CAGCCTGACCCAGGCCGGCCAGCATGGCAGAGAGGT...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCACCGCGTGTTGAGGGGTaGGGGCTGGACAGTGACTCT +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPPRVEG*GLDSDS
Trigger: AGAGTCACTGTCCAGCCCCCACCCCTCAACACGCGG...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGCGGGGAGGCGGGCGATaGTCTCCTGCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQRGGGR*SPAAAL
Trigger: CAGAGCAGCTGCAGGAGATCATCGCCCGCCTCCCCG...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCCAGGTCAGTCACAATaGGAGTGGAGCACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGPGQSQ*EWSTCQ
Trigger: TTGGCAAGTGCTCCACTCTCATTGTGACTGACCTGG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCACACCGGCCACACCTaGGGGCTCCTTGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNHTGHT*GLLEGS
Trigger: CGACCCCTCAAGGAGCCCTCAGGTGTGGCCGGTGTG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCCCGGCCCACGACCTCTaGGAAAATGTCCTCCACACT +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAPAHDL*ENVLHT
Trigger: AGTGTGGAGGACATTTTCTCAGAGGTCGTGGGCCGG...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCGTCTCTGTCTTAGGCTaGCGCAGCTGCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAVSVLG*RSCCPS
Trigger: AGAAGGGCAGCAGCTGCGTCAGCCTAAGACAGAGAC...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAGTGAGGGGCCCAGCCTaGGAATCCAGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKVRGPA*ESSCWG
Trigger: GCCCCAGCAGCTGGATTCTCAGGCTGGGCCCCTCAC...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCAACTGCCTCTAAAATaGGATCAGACCAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGQLPLK*DQTRPS
Trigger: GGAGGGCCTGGTCTGATCTCATTTTAGAGGCAGTTG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACCCCTGAGAGACCCTaGGATAGGAGGGCCCACATT +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGATPERP*DRRAHI
Trigger: AATGTGGGCCCTCCTATCTCAGGGTCTCTCAGGGGT...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCATTTCCACAGCCACATaGACCAACCGTCCGGGCGTG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAISTAT*TNRPGV
Trigger: CACGCCCGGACGGTTGGTGCATGTGGCTGTGGAAAT...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACGCACCCGACCCAGCATaGCATCCACACCGGCCACAC +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNAPDPA*HPHRPH
Trigger: GTGTGGCCGGTGTGGATGGCATGCTGGGTCGGGTGC...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCAGCGATGCCTCCAGGGTaGTCTGCAGACCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPAMPPG*SADHCP
Trigger: AGGACAGTGGTCTGCAGAGCACCCTGGAGGCATCGC...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAATGCTCCTGCCGCCCCTaGTGTCCCTGCTGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKCSCRP*CPCWKR
Trigger: CCGCTTCCAGCAGGGACAGCAGGGGCGGCAGGAGCA...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGTTGGGTCCTGACCGCTaGCGCTTCCGGCCCACGACC +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQLGPDR*RFRPTT
Trigger: GGTCGTGGGCCGGAAGCGGCAGCGGTCAGGACCCAA...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCGGTCCCACTTGAGCTaGTGCCGGCCCCTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNRSHLS*CRPLVR
Trigger: CCTGACGAGGGGCCGGCAGCAGCTCAAGTGGGACCG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCCGGTCCCACTTGAGCTaGTGCCGGCCCCTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLARSHLS*CRPLVR
Trigger: CCTGACGAGGGGCCGGCAGCAGCTCAAGTGGGACCG...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTCCACGCTGCAGGAAGTaGAGCTTCTGGGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPPRCRK*SFWARR
Trigger: GCGCCGGGCCCAGAAGCTGCACTTCCTGCAGCGTGG...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCTCCTCTTCCGCATCTTaGCCTTCTTGGAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGASSSAS*PSWSGH
Trigger: GTGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGA...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGACAGATGATGGCTCCTaGAGGGAGTGCCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRTDDGS*RECPQC
Trigger: GCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGT...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCACAGCCCACTCCCAGCTaGAACCATGTCCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPQPTPS*NHVQWE
Trigger: CTCCCACTGGACATGGTTGCAGCTGGGAGTGGGCTG...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCTGTGCCTGTTCAGAGTaGTGTGGGCCTGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGACACSE*CGPAMR
Trigger: CCTCATGGCAGGCCCACAGCACTCTGAACAGGCACA...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCGAGCCGCTCGAACATTaGGAGGAGGAAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAEPLEH*EEEAGC
Trigger: ACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTC...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCTGCAGGGCTGCAAACTaGTCTTCCATCCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGCRAAN*SSILSP
Trigger: TGGAGACAGGATGGAAGACCAGTTTGCAGCCCTGCA...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CCTAGCTCCTTAGTGAACTTCAGGGTCTGCAGGGCCAGCTCTCGGGTCGGCGAGATTCCACCAGCAGTTTaGGCAGCGTGGCGGAGAACA +
Preference number: 4 (lower is better)
Translates to: PSSLVNFRVCRASSRVGEIPPAV*AAWRRT
Trigger: TGTTCTCCGCCACGCTGCCCAAACTGCTGGTGGAAT...CTCGCCGACCCGAGAGCTGGCCCTGCAGACCCTGAAGTTCACTAAGGAGCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGACGTTGTGCAGCAGGTaGAGCAGCACGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRTLCSR*SSTAAL
Trigger: CAAGGCTGCCGTGCTGCTCCACCTGCTGCACAACGT...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCACGGCGTGGTGCTTCGTaGCCACAAACACCACGGTCT +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPRRGAS*PQTPRS
Trigger: AGACCGTGGTGTTTGTGGCCACGAAGCACCACGCCG...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACGGTCCTTCTGCCGCTTaGCGCGCATCACCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNGPSAA*RASPGC
Trigger: GCAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACC...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACGCATCTTGCCCTTCTTaGAGCGGGCACCCCGGCCGA +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNASCPS*SGHPGR
Trigger: TCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGC...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACTGTGTCCTTGCCCCCTaGGCTGGGCATCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHCVLAP*AGHPVP
Trigger: GGGAACAGGATGCCCAGCCCAGGGGGCAAGGACACA...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCATCTGACCTCCAGGTGTaGAGGGGCCGCGTTAACCTC +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPSDLQV*RGRVNL
Trigger: GAGGTTAACGCGGCCCCTCCACACCTGGAGGTCAGA...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACAGGCCCCCTCCACTATaGACTCTGCCAGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHRPPPL*TLPGEG
Trigger: CCCCTCACCTGGCAGAGTCCATAGTGGAGGGGGCCT...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAATCTTACGGTCCCACTTaGGCTGCTGCCGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKSYGPT*AAAGPS
Trigger: CGAGGGGCCGGCAGCAGCTCAAGTGGGACCGTAAGA...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTGGGCAGAGAGCTGCTTaGGGCCACCACGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPGQRAA*GHHAAG
Trigger: TCCTGCAGCGTGGTGGCCTCAAGCAGCTCTCTGCCC...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCGGGCAGAGAGCTGCTTaGGGCCACCACGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLAGQRAA*GHHAAG
Trigger: TCCTGCAGCGTGGTGGCCTCAAGCAGCTCTCTGCCC...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCGCTCCTTTTCACAGATaGTGGCTCCTGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAAPFHR*WLLQGV
Trigger: CACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGC...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGAGGGTCCATGCTAGATaGGAGATCACCAAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRRVHAR*EITKAP
Trigger: GGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCT...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACGCCCTGATGAGGAGGTaGTGGGAAGGTCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHALMRR*WEGQGA
Trigger: AGCCCCTTGACCTTCCCATCACCTCCTCATCAGGGC...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACGCTGTGGGCCTGCCATaGGGGGCACATAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNAVGLP*GAHSKH
Trigger: GTGCTTGCTATGTGCCCCTCATGGCAGGCCCACAGC...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGGTGGGGGCTGGACAGTaGCTCTGGGGCTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQVGAGQ*LWGWDV
Trigger: CACATCCCAGCCCCAGAGTCACTGTCCAGCCCCCAC...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GTGAACTTGCCTAGCTCCTTAGTGAACTTCAGGGTCTGCAGGGCCAGCTCTCGGGCTCCACATCCGAGGTaGATTCCGAGGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VNLPSSLVNFRVCRASSRAPHPR*IPRWGR
Trigger: CCTTCCCCACCTCGGAATGCACCTCGGATGTGGAGC...CCGAGAGCTGGCCCTGCAGACCCTGAAGTTCACTAAGGAGCTAGGCAAGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCATGGCCACCACGTCCTTaGCATCCAAGATCACCGGGA +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPWPPRP*HPRSPG
Trigger: TCCCGGTGATCTTGGATGGCAAGGACGTGGTGGCCA...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp ATTTCCACAGCCACATGCACCAACCGTCCGGGCGTGGCAATAATTATGTCGGGAAGGCTGTCTTGCCACTaGCCGTCCGGGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: ISTATCTNRPGVAIIMSGRLSCH*PSGPWP
Trigger: TGGCCATGGCCCGGACGGGCAGTGGCAAGACAGCCT...TCCCGACATAATTATTGCCACGCCCGGACGGTTGGTGCATGTGGCTGTGGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGGGAAGCAGGCTGTCTTaGCACTGCCCGTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQGSRLS*HCPSGP
Trigger: TGGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCC...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGATTTCCACAGCCACATaGACCAACCGTCCGGGCGTG +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRISTAT*TNRPGV
Trigger: CACGCCCGGACGGTTGGTGCATGTGGCTGTGGAAAT...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGGGTGCAGGAAGAGTTTaGCCTTGGCGGGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRGAGRV*PWRGSC
Trigger: ACAGCTTCCCCGCCAAGGGCAAACTCTTCCTGCACC...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACGCCTCCAGGGTGCTCTaGAGACCACTGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNASRVL*RPLSSS
Trigger: CGAGGAGGACAGTGGTCTGCAGAGCACCCTGGAGGC...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCCGTGAGCGCACATACTaGTGCTGGGCGTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGARERTY*CWALSA
Trigger: TGCTGATAACGCCCAGCAGCAGTATGTGCGCTCACG...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCATCCTCCTTCTCAGGCTaGTTCTCCTGCAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPSSFSG*FSCSAG
Trigger: CCCAGCACTGCAGGAGAAGCAGCCTGAGAAGGAGGA...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGGCGCCAGCTGCCTGCTaGTCAAAGGCTCCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQAPAAC*SKAPPS
Trigger: GGAAGGGGGAGCCTTTGAGCAGCAGGCAGCTGGCGC...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTTGGGCCCGGCGCCGCTaGTTCAGGATCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPWARRR*FRICCL
Trigger: CAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCA...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATTGGGCCCGGCGCCGCTaGTTCAGGATCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNWARRR*FRICCL
Trigger: CAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCA...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCATTGAGGCCACCACGCTaGAGGAAGTGCAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPLRPPR*RKCSFW
Trigger: CCAGAAGCTGCACTTCCTGCAGCGTGGTGGCCTCAA...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCATCCTCTTCCGCATCTTaGCCTTCTTGGAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPSSSAS*PSWSGH
Trigger: GTGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGA...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGTTGCTGGCGAACTCCTaGACACCCTTCAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRLLANS*TPFKAL
Trigger: CAGGGCCTTGAAGGGTGTGCAGGAGTTCGCCAGCAA...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGTCCTCCACTGGGCCATaGCAGCTCGCGACCGAGGTC +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQSSTGP*QLATEV
Trigger: GACCTCGGTCGCGAGCTGCCATGGCCCAGTGGAGGA...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCGGGATGGTCTTCCTCTaGATGGGTGTTGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAGMVFL*MGVGTL
Trigger: CAAGGTGCCAACACCCATCCAGAGGAAGACCATCCC...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CTGGGCACTGTGGGTCTTGAGCCGCTCGAACATTGGGAGGAGGAAGCAGGCTGTGGGATGGTCTTCCTCTaGATGGGTGTTGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LGTVGLEPLEHWEEEAGCGMVFL*MGVGTL
Trigger: CAAGGTGCCAACACCCATCCAGAGGAAGACCATCCC...ACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp CGTCCGGGCGTGGCAATAATTATGTCGGGATTTTCGTGCAGGGCTGCAAACTGGCCGGTCTGGGCACTGTaGGTCTTGAGCCGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: RPGVAIIMSGFSCRAANWPVWAL*VLSRSN
Trigger: GTTCGAGCGGCTCAAGACCCACAGTGCCCAGACCGG...CCAGTTTGCAGCCCTGCACGAAAATCCCGACATAATTATTGCCACGCCCGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATACCACGGTCTGGTCCTaGGGCCGCACCACGTTGTGC +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNTTVWS*GRTTLC
Trigger: GCACAACGTGGTGCGGCCCCAGGACCAGACCGTGGT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTGGTCCTTCTGCCGCTTaGCGCGCATCACCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPGPSAA*RASPGC
Trigger: GCAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACC...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCCTCCCTCCGCCTCTTaGCTCCCCTGTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNPPSAS*LPCWVL
Trigger: CAGGACCCAACAGGGGAGCCAAGAGGCGGAGGGAGG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCACCCCTCGTCAGGTTCTaGGCTTCATCCCCCATCAAG +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPPLVRF*ASSPIK
Trigger: CTTGATGGGGGATGAAGCCCAGAACCTGACGAGGGG...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGAGGAAGTGCAGCTTCTaGGCCCGGCGCCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQRKCSF*ARRRCF
Trigger: GAAGCAGCGGCGCCGGGCCCAGAAGCTGCACTTCCT...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACGGGCCAGGCACACAGTaGTGCACGGGAACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNGPGTQ*CTGTSA
Trigger: AGCAGACGTTCCCGTGCACCACTGTGTGCCTGGCCC...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCTCTGCCACGTTAGCTaGGATTTTAGTACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGLCHVS*DFSTWV
Trigger: GACCCAGGTACTAAAATCCCAGCTAACGTGGCAGAG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACCTCAAACAGGGGGTaGGTGGCAAGAAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGATSNRG*VARRQR
Trigger: CCTCTGTCTTCTTGCCACCCACCCCCTGTTTGAGGT...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCAATCCGTTTCCTCATTaGGAAGATGGGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGNPFPH*EDGRAV
Trigger: CACAGCCCTCCCATCTTCCCAATGAGGAAACGGATT...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACGGGCACTGTGGGTCTTaGGCCGCTCGAACATTGGGA +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNGHCGS*AARTLG
Trigger: TCCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCC...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAATCTCCTTGGCCCTCTTaGTGGACTCAGGCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKSPWPS*WTQARA
Trigger: CGCCCTCGCCTGAGTCCATCAAGAGGGCCAAGGAGA...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTTCTCCTTGGCCCTCTTaGTGGACTCAGGCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPSPWPS*WTQARA
Trigger: CGCCCTCGCCTGAGTCCATCAAGAGGGCCAAGGAGA...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCCTCAAAACGCGAGCTaGAGAGGGGGTGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNPQNAS*RGGAGP
Trigger: TGGGCCTGCACCCCCTCTTCAGCTCGCGTTTTGAGG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTCCTCAAAACGCGAGCTaGAGAGGGGGTGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPPQNAS*RGGAGP
Trigger: TGGGCCTGCACCCCCTCTTCAGCTCGCGTTTTGAGG...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACCCGGCCCACGACCTCTaGGAAAATGTCCTCCACACT +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHPAHDL*ENVLHT
Trigger: AGTGTGGAGGACATTTTCTCAGAGGTCGTGGGCCGG...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCAGCTCCTTTTCACAGATaGTGGCTCCTGCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPAPFHR*WLLQGV
Trigger: CACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGC...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCATGCTGGGGCTGCCCTTaGCCTTCTCAGAACCTCAAA +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPCWGCP*PSQNLK
Trigger: TTTGAGGTTCTGAGAAGGTCAAGGGCAGCCCCAGCA...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTGCTGTGGGCCTGCCATaGGGGGCACATAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPAVGLP*GAHSKH
Trigger: GTGCTTGCTATGTGCCCCTCATGGCAGGCCCACAGC...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACGCTCCACATCCGAGGTaGATTCCGAGGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNAPHPR*IPRWGR
Trigger: CCTTCCCCACCTCGGAATGCACCTCGGATGTGGAGC...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACTGGCCACCACGTCCTTaGCATCCAAGATCACCGGGA +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHWPPRP*HPRSPG
Trigger: TCCCGGTGATCTTGGATGGCAAGGACGTGGTGGCCA...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAACCAAGGAGTAGGCTGTaGCACTTCGGCCAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKPRSRL*HFGQPE
Trigger: CTCGGGCTGGCCGAAGTGGCACAGCCTACTCCTTGG...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAGCCTCCAGGGTGCTCTaGAGACCACTGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKASRVL*RPLSSS
Trigger: CGAGGAGGACAGTGGTCTGCAGAGCACCCTGGAGGC...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTACAGCGCCAGCTGCCTaGTGCTCAAAGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPTAPAA*CSKAPP
Trigger: AGGGGGAGCCTTTGAGCAGCAGGCAGCTGGCGCTGT...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATTCCCACTTGAGCTGCTaGCGGCCCCTCGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNSHLSC*RPLVRF
Trigger: GAACCTGACGAGGGGCCGGCAGCAGCTCAAGTGGGA...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGGCCTCGCCGGTCAGATaGCCCTTCTTCGTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQASPVR*PFFVRV
Trigger: GACTCGGACGAAGAAGGGGCATCTGACCGGCGAGGC...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCTGCTTCAGGATCTGCTaGTTGGTCTTGAGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGACFRIC*LVLSSG
Trigger: CCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCA...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCAGCTGTGAAGGTGTCTaGTCACGCAGCAGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGASCEGV*SRSSWE
Trigger: TTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCT...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACGCGTCATCTTCCGCCTaGATCTCAAACTCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHASSSA*ISNSPS
Trigger: GGACGGCGAGTTTGAGATCCAGGCGGAAGATGACGC...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCTTCTTCTTCTTGTTCTaGGCACGCACCATCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGAFFFLF*ARTISR
Trigger: CCGGGAGATGGTGCGTGCCCAGAACAAGAAGAAGAA...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACGGTAGCTCAGGCCCATaGACTGGAAGCCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHGSSGP*TGSLQT
Trigger: AGTCTGGAGGCTTCCAGTCCATGGGCCTGAGCTACC...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GTGAACTTGCCTAGCTCCTTAGTGAACTTCAGGGTCTGCAGGGCCAGCTCTCGGGAGCCGCTCGAACATTaGGAGGAGGAAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VNLPSSLVNFRVCRASSREPLEH*EEEAGC
Trigger: ACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTC...CCGAGAGCTGGCCCTGCAGACCCTGAAGTTCACTAAGGAGCTAGGCAAGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGCCGGTCTGGGCACTGTaGGTCTTGAGCCGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQPVWAL*VLSRSN
Trigger: GTTCGAGCGGCTCAAGACCCACAGTGCCCAGACCGG...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CGTCCGGGCGTGGCAATAATTATGTCGGGATTTTCGTGCAGGGCTGCAAACTGGGCAGTTTGGGCAGCGTaGCGGAGAACAGCACCGTCT +
Preference number: 4 (lower is better)
Translates to: RPGVAIIMSGFSCRAANWAVWAA*RRTAPS
Trigger: AGACGGTGCTGTTCTCCGCCACGCTGCCCAAACTGC...CCAGTTTGCAGCCCTGCACGAAAATCCCGACATAATTATTGCCACGCCCGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAATTCCACCAGCAGTTTaGGCAGCGTGGCGGAGAACA +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPIPPAV*AAWRRT
Trigger: TGTTCTCCGCCACGCTGCCCAAACTGCTGGTGGAAT...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGACAAACACCACGGTCTaGTCCTGGGGCCGCACCACG +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQTNTTV*SWGRTT
Trigger: CGTGGTGCGGCCCCAGGACCAGACCGTGGTGTTTGT...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACGTGAGGTACTCGGCGTaGTGCTTCGTGGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHVRYSA*CFVATN
Trigger: GTTTGTGGCCACGAAGCACCACGCCGAGTACCTCAC...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCGTCCACCACACTCTGTaGCACCCGACCCAGCATGCC +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLAVHHTL*HPTQHA
Trigger: GGCATGCTGGGTCGGGTGCCACAGAGTGTGGTGGAC...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAATCTTGGCTCCCCTGTTaGGTCCTGACCGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKSWLPC*VLTAAA
Trigger: AGCGGCAGCGGTCAGGACCCAACAGGGGAGCCAAGA...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCGGGATGCACCTGCTTaGCCACGGTCTCGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNRDAPA*PRSRFP
Trigger: TGGGAAGCGAGACCGTGGCCAAGCAGGTGCATCCCG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCACGGGGCTGGGTCCTaGTCCTCACATCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNHGAGS*SSHPLP
Trigger: CGGAAGAGGATGTGAGGACCAGGACCCAGCCCCGTG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGCACGGGGCTGGGTCCTaGTCCTCACATCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQHGAGS*SSHPLP
Trigger: CGGAAGAGGATGTGAGGACCAGGACCCAGCCCCGTG...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTGGGCCAGGCACACAGTaGTGCACGGGAACGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPGPGTQ*CTGTSA
Trigger: AGCAGACGTTCCCGTGCACCACTGTGTGCCTGGCCC...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAAGTAGACCGCACTCCTaGCCACCAGCAGTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPSRPHS*PPAVLN
Trigger: ATTGAGCACTGCTGGTGGCCAGGAGTGCGGTCTACT...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACACCAACTCCCGCCTCTaGCACCTGGTTTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHTNSRL*HLVCAL
Trigger: CAGAGCACAAACCAGGTGCCAGAGGCGGGAGTTGGT...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATTGTGTCCTTGCCCCCTaGGCTGGGCATCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNCVLAP*AGHPVP
Trigger: GGGAACAGGATGCCCAGCCCAGGGGGCAAGGACACA...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAAGGCCCCCTCCACTATaGACTCTGCCAGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKRPPPL*TLPGEG
Trigger: CCCCTCACCTGGCAGAGTCCATAGTGGAGGGGGCCT...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAGGGCACTGTGGGTCTTaGGCCGCTCGAACATTGGGA +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKGHCGS*AARTLG
Trigger: TCCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCC...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCTCTTCAGCTGCTCGTTaGGCTTGGTATCCACGTCAA +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGASSAAR*AWYPRQ
Trigger: TTGACGTGGATACCAAGCTCAACGAGCAGCTGAAGA...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTTCGTCAGCAGCTCAGTaGGGTACTCGGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPSSAAQ*GTRRGA
Trigger: AGCACCACGCCGAGTACCTCACTGAGCTGCTGACGA...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCCAGGTCAGTCACAATaGGAGTGGAGCACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRPGQSQ*EWSTCQ
Trigger: TTGGCAAGTGCTCCACTCTCATTGTGACTGACCTGG...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTGCTTGTAGGAGCTGCTaGTGTAGCGGCCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPACRSC*CSGRSL
Trigger: CAGAGAGCGGCCGCTACATCAGCAGCTCCTACAAGC...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCATGCAGCCATGACCTCTaGACCCAGAACACATGGAAG +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPCSHDL*TQNTWK
Trigger: CTTCCATGTGTTCTGGGTTCAGAGGTCATGGCTGCA...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTATGGACTCTGCCAGGTaGGGGGCCCAGCCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPMDSAR*GAQPEN
Trigger: ATTCTCAGGCTGGGCCCCTCACCTGGCAGAGTCCAT...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACCAATGGGGTGTGGACTaGGTGGCTCTTCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHQWGVD*VALPES
Trigger: GGATTCAGGAAGAGCCACTCAGTCCACACCCCATTG...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATGCAGCGAGGAAGCTGTaGAGGTGTCTGCTCACGCAG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNAARKL*RCLLTQ
Trigger: CTGCGTGAGCAGACACCTTCACAGCTTCCTCGCTGC...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAGTGAACTTCAGGGTCTaGAGGGCCAGCTCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKVNFRV*RASSRV
Trigger: GACCCGAGAGCTGGCCCTGCAGACCCTGAAGTTCAC...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTCGGGCGATGATCTCCTaGAGCTGCTCTGCGAAACCC +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPRAMIS*SCSAKP
Trigger: GGGTTTCGCAGAGCAGCTGCAGGAGATCATCGCCCG...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCCTTCTCAGGCTaGTTCTCCTGCAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNSSFSG*FSCSAG
Trigger: CCCAGCACTGCAGGAGAAGCAGCCTGAGAAGGAGGA...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCATGCTTCAGGATCTGCTaGTTGGTCTTGAGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPCFRIC*LVLSSG
Trigger: CCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCA...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCACGCTGCTTCAGGATCTaGTGCTTGGTCTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPRCFRI*CLVLSS
Trigger: GGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCG...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCTCTGTGGCCATACAGTaGTCCTTTTCACAGATGATG +
Preference number: 4 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGSVAIQ*SFSQMM
Trigger: CATCATCTGTGAAAAGGAGCACTGTATGGCCACAGA...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGTGGCCTGCCTGGCTTTaGTGGCGAACTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQWPAWL*WRTPAH
Trigger: GTGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCA...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACACTCAAGTCTTGGCCTaGCTGGCTTTGCTGGCGAAC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHTQVLA*LALLAN
Trigger: GTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGT...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGGACCCGCAACTCCTCTaGCACGTTAGCTGGGATTTT +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRDPQLL*HVSWDF
Trigger: AAAATCCCAGCTAACGTGGCAGAGGAGTTGCGGGTC...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTGTGCCTGTTCAGAGTaGTGTGGGCCTGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNCACSE*CGPAMR
Trigger: CCTCATGGCAGGCCCACAGCACTCTGAACAGGCACA...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp ATTATGTCGGGATTTTCGTGCAGGGCTGCAAACTGGTCTTCCATCCTGTCTCCATCCTCCACTGGGCCATaGCAGCTCGCGACCGAGGTC +
Preference number: 4 (lower is better)
Translates to: IMSGFSCRAANWSSILSPSSTGP*QLATEV
Trigger: GACCTCGGTCGCGAGCTGCCATGGCCCAGTGGAGGA...TGGAGACAGGATGGAAGACCAGTTTGCAGCCCTGCACGAAAATCCCGACATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCATTCTTCTTCTTGTTCTaGGCACGCACCATCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPFFFLF*ARTISR
Trigger: CCGGGAGATGGTGCGTGCCCAGAACAAGAAGAAGAA...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCCTCTGGATGGGTGTTaGCACCTTGTACCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRPLDGC*HLVPLL
Trigger: AAGAAGGGGTACAAGGTGCCAACACCCATCCAGAGG...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCACCTCTGGATGGGTGTTaGCACCTTGTACCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPPLDGC*HLVPLL
Trigger: AAGAAGGGGTACAAGGTGCCAACACCCATCCAGAGG...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGTGCAGGGCTGCAAACTaGTCTTCCATCCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRCRAAN*SSILSP
Trigger: TGGAGACAGGATGGAAGACCAGTTTGCAGCCCTGCA...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATACGTTGTGCAGCAGGTaGAGCAGCACGGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNTLCSR*SSTAAL
Trigger: CAAGGCTGCCGTGCTGCTCCACCTGCTGCACAACGT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAACGGCGTGGTGCTTCGTaGCCACAAACACCACGGTCT +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKRRGAS*PQTPRS
Trigger: AGACCGTGGTGTTTGTGGCCACGAAGCACCACGCCG...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAGCTGCTGCCCTTCTGTaGCCATACAGTGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPAAALL*PYSAPF
Trigger: AAAAGGAGCACTGTATGGCCACAGAAGGGCAGCAGC...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCTCTGACCTCCAGGTGTaGAGGGGCCGCGTTAACCTC +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLASDLQV*RGRVNL
Trigger: GAGGTTAACGCGGCCCCTCCACACCTGGAGGTCAGA...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCCTGTTCAGAGTGCTGTaGGCCTGCCATGAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLALFRVL*ACHEGH
Trigger: GTGCCCCTCATGGCAGGCCCACAGCACTCTGAACAG...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCAGCAGTTGGGAAGGTTaGCCTGAGGCTTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: QWCTGTSADAHPKANQGASSWEG*PEAFKT
Trigger: GGTTTTGAAAGCCTCAGGCCAACCTTCCCAACTGCT...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTGCTCACGCAGCAGTTaGGAAGGTTGGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNCSRSS*EGWPEA
Trigger: AGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCA...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CAA 72 bp ATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTaGGCCTGCCTGGCTTTGCTGGCGAACTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: MEAAAAELPTQV*ACLALLANSCT
Trigger: TGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTACCCCTGAGAGACCCTaGGATAGGAGGGCCCACATT +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPTPERP*DRRAHI
Trigger: AATGTGGGCCCTCCTATCTCAGGGTCTCTCAGGGGT...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCATTGGGAAGGTTGGCCTaGGGCTTTCAAAACCCAGAA +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPLGRLA*GFQNPE
Trigger: TTCTGGGTTTTGAAAGCCTCAGGCCAACCTTCCCAA...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCGTTGAGCTTGGTATCCACGTCAAGCCGGATGAGCACGGGCTCCGTGAGGCCAACGTATTCCACACTCTaGAGCTTCAGGCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SLSLVSTSSRMSTGSVRPTYSTL*SFRLIS
Trigger: GGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGT...TGGCCTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAAAGGAGGTCTTCAGCTaGTCGTTGAGCTTGGTATCC +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPKEVFS*SLSLVS
Trigger: GGATACCAAGCTCAACGAGCAGCTGAAGACCTCCTT...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATAGGTACTCGGCGTGGTaGTTCGTGGCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNRYSAW*FVATNT
Trigger: GGTGTTTGTGGCCACGAAGCACCACGCCGAGTACCT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTGGTGCAGGAAGAGTTTaGCCTTGGCGGGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPGAGRV*PWRGSC
Trigger: ACAGCTTCCCCGCCAAGGGCAAACTCTTCCTGCACC...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACAGCGGTAGTTCTTTATaGTGTCCACCAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHSGSSL*CPPASA
Trigger: GGCTGAGGCTGGTGGACAGCATAAAGAACTACCGCT...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTTTGAGGCCACCACGCTaGAGGAAGTGCAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPLRPPR*RKCSFW
Trigger: CCAGAAGCTGCACTTCCTGCAGCGTGGTGGCCTCAA...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTTTGCTGGCGAACTCCTaGACACCCTTCAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPLLANS*TPFKAL
Trigger: CAGGGCCTTGAAGGGTGTGCAGGAGTTCGCCAGCAA...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACCCTGGCCACCAGCAGTaGTCAATAAAGATTTATTAC +
Preference number: 4 (lower is better)
Translates to: LPPSPDTGEQREREPLRDPGHQQ*SIKIYY
Trigger: GTAATAAATCTTTATTGAGCACTGCTGGTGGCCAGG...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATAGAGTGCTGTGGGCCTaGCATGAGGGGCACATAGCA +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNRVLWA*HEGHIA
Trigger: TGCTATGTGCCCCTCATGGCAGGCCCACAGCACTCT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAAGAGTGCTGTGGGCCTaGCATGAGGGGCACATAGCA +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKRVLWA*HEGHIA
Trigger: TGCTATGTGCCCCTCATGGCAGGCCCACAGCACTCT...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGAGAACAGCACCGTCTaGTGGCCCCCGGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPENSTV*WPPGRR
Trigger: CCGCCTCCCCGGGGGCCACCAGACGGTGCTGTTCTC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGGTGAGGTACTCGGCGTaGTGCTTCGTGGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQVRYSA*CFVATN
Trigger: GTTTGTGGCCACGAAGCACCACGCCGAGTACCTCAC...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTCGCACATACTGCTGCTaGGCGTTATCAGCAACGCGG +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPRTYCC*ALSATR
Trigger: CCGCGTTGCTGATAACGCCCAGCAGCAGTATGTGCG...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCCGCACATACTGCTGCTaGGCGTTATCAGCAACGCGG +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLARTYCC*ALSATR
Trigger: CCGCGTTGCTGATAACGCCCAGCAGCAGTATGTGCG...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCCCCTCGTCAGGTTCTaGGCTTCATCCCCCATCAAG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNPLVRF*ASSPIK
Trigger: CTTGATGGGGGATGAAGCCCAGAACCTGACGAGGGG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACGCTGCTGCCCTTCTGTaGCCATACAGTGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHAAALL*PYSAPF
Trigger: AAAAGGAGCACTGTATGGCCACAGAAGGGCAGCAGC...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTACCAACTCCCGCCTCTaGCACCTGGTTTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPTNSRL*HLVCAL
Trigger: CAGAGCACAAACCAGGTGCCAGAGGCGGGAGTTGGT...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGATTTCCAATGGGGTGTaGACTGAGTGGCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRISNGV*TEWLFL
Trigger: CAGGAAGAGCCACTCAGTCCACACCCCATTGGAAAT...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
3UTR CAA 72 bp ACCGGGATGGTCTTCCTCTGGATGGGTGTTGGCACCTaGTACCCCTTCTTCATGATGCCTTTGAACACCGGG +
Preference number: 4 (lower is better)
Translates to: TGMVFLWMGVGT*YPFFMMPLNTG
Trigger: CCCGGTGTTCAAAGGCATCATGAAGAAGGGGTACAAGGTGCCAACACCCATCCAGAGGAAGACCATCCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR TCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGTGAGGGGCCCAGCCTaGGAATCCAGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPVRGPA*ESSCWG
Trigger: GCCCCAGCAGCTGGATTCTCAGGCTGGGCCCCTCAC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAACGTATTCCACACTCTaGAGCTTCAGGCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPTYSTL*SFRLIS
Trigger: GGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGT...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCGTGAGCGCACATACTaGTGCTGGGCGTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNRERTY*CWALSA
Trigger: TGCTGATAACGCCCAGCAGCAGTATGTGCGCTCACG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACAGCGGTAGTTCTTTATaGTGTCCACCAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNSGSSL*CPPASA
Trigger: GGCTGAGGCTGGTGGACAGCATAAAGAACTACCGCT...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACCGCTGCTTCAGGATCTaGTGCTTGGTCTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNRCFRI*CLVLSS
Trigger: GGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCG...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGACTCAAGTCTTGGCCTaGCTGGCTTTGCTGGCGAAC +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQTQVLA*LALLAN
Trigger: GTTCGCCAGCAAAGCCAGGCAGGCCAAGACTTGAGT...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCTCAGGCCCATGGACTaGAAGCCTCCAGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNLRPMD*KPPDFF
Trigger: GAAGAAGTCTGGAGGCTTCCAGTCCATGGGCCTGAG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGGGGATGGTCTTCCTCTaGATGGGTGTTGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQGMVFL*MGVGTL
Trigger: CAAGGTGCCAACACCCATCCAGAGGAAGACCATCCC...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCCAAGATCACCGGGATaGTCTTCCTCTGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNPRSPG*SSSGWV
Trigger: CACCCATCCAGAGGAAGACCATCCCGGTGATCTTGG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAATGCCAACTCAAGTCTTaGCCTGCCTGGCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKCQLKS*PAWLCW
Trigger: CCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCA...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGACCTCAAACAGGGGGTaGGTGGCAAGAAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQTSNRG*VARRQR
Trigger: CCTCTGTCTTCTTGCCACCCACCCCCTGTTTGAGGT...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACCTCAGTCACCACCTCTaGGAACCACCATCATCACTG +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNLSHHL*EPPSSL
Trigger: CAGTGATGATGGTGGTTCCCAGAGGTGGTGACTGAG...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACAGCAGTTGGGAAGGTTaGCCTGAGGCTTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHSSWEG*PEAFKT
Trigger: GGTTTTGAAAGCCTCAGGCCAACCTTCCCAACTGCT...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCTGCAGCCATGACCTCTaGACCCAGAACACATGGAAG +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLACSHDL*TQNTWK
Trigger: CTTCCATGTGTTCTGGGTTCAGAGGTCATGGCTGCA...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGCAACTGCCTCTAAAATaGGATCAGACCAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQQLPLK*DQTRPS
Trigger: GGAGGGCCTGGTCTGATCTCATTTTAGAGGCAGTTG...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGTGGGGGCTGGACAGTaGCTCTGGGGCTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPVGAGQ*LWGWDV
Trigger: CACATCCCAGCCCCAGAGTCACTGTCCAGCCCCCAC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACATTTTCGTGCAGGGCTaGAAACTGGTCTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHIFVQG*KLVFHP
Trigger: AGGATGGAAGACCAGTTTGCAGCCCTGCACGAAAAT...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACATGTCGGGATTTTCGTaGAGGGCTGCAAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNMSGFS*RAANWS
Trigger: AGACCAGTTTGCAGCCCTGCACGAAAATCCCGACAT...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACACGTATTCCACACTCTaGAGCTTCAGGCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHTYSTL*SFRLIS
Trigger: GGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGT...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGCACCCGACCCAGCATaGCATCCACACCGGCCACAC +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPAPDPA*HPHRPH
Trigger: GTGTGGCCGGTGTGGATGGCATGCTGGGTCGGGTGC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGAGCTGAAGAGGGGGTaGAGGCCCAGCCCCACAAGG +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPELKRG*RPSPTR
Trigger: CCTTGTGGGGCTGGGCCTGCACCCCCTCTTCAGCTC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAAGCTGTGAAGGTGTCTaGTCACGCAGCAGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKSCEGV*SRSSWE
Trigger: TTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCT...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATTGGTCTTCCTCTGGATaGGTGTTGGCACCTTGTACC +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNWSSSG*VLAPCT
Trigger: GGTACAAGGTGCCAACACCCATCCAGAGGAAGACCA...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCTGGTCTTCCTCTGGATaGGTGTTGGCACCTTGTACC +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLAWSSSG*VLAPCT
Trigger: GGTACAAGGTGCCAACACCCATCCAGAGGAAGACCA...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGCAGCACGGCAGCCTTaGTGTCCTCCCGCACGAGGA +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPAARQP*CPPARG
Trigger: TCCTCGTGCGGGAGGACACCAAGGCTGCCGTGCTGC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCACCTCCCTCCGCCTCTTaGCTCCCCTGTTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPPPSAS*LPCWVL
Trigger: CAGGACCCAACAGGGGAGCCAAGAGGCGGAGGGAGG...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCATGGGATTTTAGTACCTaGGTCTCTCCATTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPWDFST*VSPFQF
Trigger: GAACTGGAATGGAGAGACCCAGGTACTAAAATCCCA...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACCTCTGCCACGTTAGCTaGGATTTTAGTACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNLCHVS*DFSTWV
Trigger: GACCCAGGTACTAAAATCCCAGCTAACGTGGCAGAG...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTTCCTCATTGGGAAGATaGGAGGGCTGTGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPSSLGR*EGCACS
Trigger: TGAACAGGCACAGCCCTCCCATCTTCCCAATGAGGA...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATGGGGTGTGGACTGAGTaGCTCTTCCTGAATCCGTTT +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNGVWTE*LFLNPF
Trigger: AAACGGATTCAGGAAGAGCCACTCAGTCCACACCCC...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGGGGGTGTGGACTGAGTaGCTCTTCCTGAATCCGTTT +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQGVWTE*LFLNPF
Trigger: AAACGGATTCAGGAAGAGCCACTCAGTCCACACCCC...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAACTCAGTCACCACCTCTaGGAACCACCATCATCACTG +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKLSHHL*EPPSSL
Trigger: CAGTGATGATGGTGGTTCCCAGAGGTGGTGACTGAG...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAATCTTCAGCTGCTCGTTaGGCTTGGTATCCACGTCAA +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKSSAAR*AWYPRQ
Trigger: TTGACGTGGATACCAAGCTCAACGAGCAGCTGAAGA...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGTTGGGAAGGTTGGCCTaGGGCTTTCAAAACCCAGAA +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQLGRLA*GFQNPE
Trigger: TTCTGGGTTTTGAAAGCCTCAGGCCAACCTTCCCAA...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATATGTCGGGATTTTCGTaGAGGGCTGCAAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNMSGFS*RAANWS
Trigger: AGACCAGTTTGCAGCCCTGCACGAAAATCCCGACAT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp CGGGATGGTCTTCCTCTGGATGGGTGTTGGCACCTTGTACCCCTTCTTCATGATATGTCGGGATTTTCGTaGAGGGCTGCAAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: RDGLPLDGCWHLVPLLHDMSGFS*RAANWS
Trigger: AGACCAGTTTGCAGCCCTGCACGAAAATCCCGACAT...ATCATGAAGAAGGGGTACAAGGTGCCAACACCCATCCAGAGGAAGACCATCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATGGCCGCACCACGTTGTaGAGCAGGTGGAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYGRTTL*SRWSST
Trigger: CGTGCTGCTCCACCTGCTGCACAACGTGGTGCGGCC...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATGCCTTGCGGTCCTTCTaGCGCTTGGCGCGCATCACC +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYALRSF*RLARIT
Trigger: GGTGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGC...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAACAGCGCCAGCTGCCTaGTGCTCAAAGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPTAPAA*CSKAPP
Trigger: AGGGGGAGCCTTTGAGCAGCAGGCAGCTGGCGCTGT...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCCTGGCCACCAGCAGTaGTCAATAAAGATTTATTAC +
Preference number: 4 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRPGHQQ*SIKIYY
Trigger: GTAATAAATCTTTATTGAGCACTGCTGGTGGCCAGG...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAACTGGCACCTGGTTTGTaGTCTGAGCTTCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKLAPGL*SELHFP
Trigger: AGGAAAGTGAAGCTCAGAGCACAAACCAGGTGCCAG...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp CATCGAACACCACGTATTCCACACTCTGCAGCTTCAGGCTCATTTCCACAGCCATGCAGGGCTGCAAACTaGTCTTCCATCCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: HRTPRIPHSAASGSFPQPCRAAN*SSILSP
Trigger: TGGAGACAGGATGGAAGACCAGTTTGCAGCCCTGCA...TGGCTGTGGAAATGAGCCTGAAGCTGCAGAGTGTGGAATACGTGGTGTTCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATGCGCAGCTCACCCGCTaGGTCGTCAGCAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYAQLTR*VVSSSV
Trigger: CACTGAGCTGCTGACGACCCAGCGGGTGAGCTGCGC...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATGCTGGAAGCGGGCGATaGCCTTGCGGTCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYAGSGR*PCGPSA
Trigger: GGCAGAAGGACCGCAAGGCCATCGCCCGCTTCCAGC...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTAATCCGTTTCCTCATTaGGAAGATGGGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPNPFPH*EDGRAV
Trigger: CACAGCCCTCCCATCTTCCCAATGAGGAAACGGATT...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATATTTCCAATGGGGTGTaGACTGAGTGGCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNISNGV*TEWLFL
Trigger: CAGGAAGAGCCACTCAGTCCACACCCCATTGGAAAT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATACCTCTCTGCCATGCTaGCCGGCCTGGGTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYTSLPC*PAWVRL
Trigger: CAGCCTGACCCAGGCCGGCCAGCATGGCAGAGAGGT...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGCTTGTAGGAGCTGCTaGTGTAGCGGCCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPACRSC*CSGRSL
Trigger: CAGAGAGCGGCCGCTACATCAGCAGCTCCTACAAGC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATTCTGCTGCTTGGTCTTaGGTTCCGGGCGGACTCGGC +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYSAAWS*VPGGLG
Trigger: GCCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGA...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAATGGACTCTGCCAGGTaGGGGGCCCAGCCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPMDSAR*GAQPEN
Trigger: ATTCTCAGGCTGGGCCCCTCACCTGGCAGAGTCCAT...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGCTCCACATCCGAGGTaGATTCCGAGGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPAPHPR*IPRWGR
Trigger: CCTTCCCCACCTCGGAATGCACCTCGGATGTGGAGC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAATTTTCGTGCAGGGCTaGAAACTGGTCTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKIFVQG*KLVFHP
Trigger: AGGATGGAAGACCAGTTTGCAGCCCTGCACGAAAAT...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAACTCCTGCAGCTGCTCTaGGAAACCCATTTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKLLQLL*ETHFKK
Trigger: CTTTTTGAAATGGGTTTCGCAGAGCAGCTGCAGGAG...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCATGATCTCCTGCAGCTaGTCTGCGAAACCCATTTCA +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLAMISCS*SAKPIS
Trigger: TGAAATGGGTTTCGCAGAGCAGCTGCAGGAGATCAT...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGATGATCTCCTGCAGCTaGTCTGCGAAACCCATTTCA +
Preference number: 4 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQMISCS*SAKPIS
Trigger: TGAAATGGGTTTCGCAGAGCAGCTGCAGGAGATCAT...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGCGATGCCTCCAGGGTaGTCTGCAGACCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPAMPPG*SADHCP
Trigger: AGGACAGTGGTCTGCAGAGCACCCTGGAGGCATCGC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATTCCCACTTGAGCTGCTaGCGGCCCCTCGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYSHLSC*RPLVRF
Trigger: GAACCTGACGAGGGGCCGGCAGCAGCTCAAGTGGGA...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATTTGCGGGCAGAGAGCTaGTTGAGGCCACCACGCTGC +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYLRAES*LRPPRC
Trigger: GCAGCGTGGTGGCCTCAAGCAGCTCTCTGCCCGCAA...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCATGGCCTGCCTGGCTTTaGTGGCGAACTCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPWPAWL*WRTPAH
Trigger: GTGTGCAGGAGTTCGCCAGCAAAGCCAGGCAGGCCA...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp GGTCAGCTTCATCGAACACCACGTATTCCACACTCTGCAGCTTCAGGCTCATTTCCTCTGGATGGGTGTTaGCACCTTGTACCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GQLHRTPRIPHSAASGSFPLDGC*HLVPLL
Trigger: AAGAAGGGGTACAAGGTGCCAACACCCATCCAGAGG...AAATGAGCCTGAAGCTGCAGAGTGTGGAATACGTGGTGTTCGATGAAGCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCACTGTTCAGAGTGCTGTaGGCCTGCCATGAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPLFRVL*ACHEGH
Trigger: GTGCCCCTCATGGCAGGCCCACAGCACTCTGAACAG...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGTCTCTGTCTTAGGCTaGCGCAGCTGCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPVSVLG*RSCCPS
Trigger: AGAAGGGCAGCAGCTGCGTCAGCCTAAGACAGAGAC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp GGGCGTGGCAATAATTATGTCGGGATTTTCGTGCAGGGCTGCAAACTGGTCTTCATTTTCGTGCAGGGCTaGAAACTGGTCTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GRGNNYVGIFVQGCKLVFIFVQG*KLVFHP
Trigger: AGGATGGAAGACCAGTTTGCAGCCCTGCACGAAAAT...GAAGACCAGTTTGCAGCCCTGCACGAAAATCCCGACATAATTATTGCCACGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp GTCTTCCTCTGGATGGGTGTTGGCACCTTGTACCCCTTCTTCATGATGCCTTTGATGATCTCCTGCAGCTaGTCTGCGAAACCCATTTCA +
Preference number: 4 (lower is better)
Translates to: VFLWMGVGTLYPFFMMPLMISCS*SAKPIS
Trigger: TGAAATGGGTTTCGCAGAGCAGCTGCAGGAGATCAT...CAAAGGCATCATGAAGAAGGGGTACAAGGTGCCAACACCCATCCAGAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR GCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATCGGGCGATGATCTCCTaGAGCTGCTCTGCGAAACCC +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYRAMIS*SCSAKP
Trigger: GGGTTTCGCAGAGCAGCTGCAGGAGATCATCGCCCG...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGTACTCGGCGTGGTaGTTCGTGGCCACAAACACC +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPRYSAW*FVATNT
Trigger: GGTGTTTGTGGCCACGAAGCACCACGCCGAGTACCT...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGCGTCATCTTCCGCCTaGATCTCAAACTCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPASSSA*ISNSPS
Trigger: GGACGGCGAGTTTGAGATCCAGGCGGAAGATGACGC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATGCAGTTTGGGCAGCGTaGCGGAGAACAGCACCGTCT +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYAVWAA*RRTAPS
Trigger: AGACGGTGCTGTTCTCCGCCACGCTGCCCAAACTGC...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAATGGGATTTTAGTACCTaGGTCTCTCCATTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKWDFST*VSPFQF
Trigger: GAACTGGAATGGAGAGACCCAGGTACTAAAATCCCA...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCTTCCTCATCGCTAAATaGACAAGGCAGCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: NPEHMEAAAAELPTQVLAFLIAK*TRQQNS
Trigger: TGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGAA...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR TCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCACAATGGGGTGTGGACTaGGTGGCTCTTCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPQWGVD*VALPES
Trigger: GGATTCAGGAAGAGCCACTCAGTCCACACCCCATTG...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAGAGCGCACATACTGCTaGTGGGCGTTATCAGCAACG +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPERTYC*WALSAT
Trigger: CGTTGCTGATAACGCCCAGCAGCAGTATGTGCGCTC...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCACTCAGGCCCATGGACTaGAAGCCTCCAGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPLRPMD*KPPDFF
Trigger: GAAGAAGTCTGGAGGCTTCCAGTCCATGGGCCTGAG...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCATGCCAACTCAAGTCTTaGCCTGCCTGGCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPCQLKS*PAWLCW
Trigger: CCAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCA...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGTAGACCGCACTCCTaGCCACCAGCAGTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPSRPHS*PPAVLN
Trigger: ATTGAGCACTGCTGGTGGCCAGGAGTGCGGTCTACT...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATTGCTCACGCAGCAGTTaGGAAGGTTGGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYCSRSS*EGWPEA
Trigger: AGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCA...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATGAGCGCACATACTGCTaGTGGGCGTTATCAGCAACG +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYERTYC*WALSAT
Trigger: CGTTGCTGATAACGCCCAGCAGCAGTATGTGCGCTC...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATCCAAGATCACCGGGATaGTCTTCCTCTGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYPRSPG*SSSGWV
Trigger: CACCCATCCAGAGGAAGACCATCCCGGTGATCTTGG...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCATCCTCATTGGGAAGATaGGAGGGCTGTGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPSSLGR*EGCACS
Trigger: TGAACAGGCACAGCCCTCCCATCTTCCCAATGAGGA...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATGACCCGCAACTCCTCTaGCACGTTAGCTGGGATTTT +
Preference number: 4 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYDPQLL*HVSWDF
Trigger: AAAATCCCAGCTAACGTGGCAGAGGAGTTGCGGGTC...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR GCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCACTCCTGCAGCTGCTCTaGGAAACCCATTTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPLLQLL*ETHFKK
Trigger: CTTTTTGAAATGGGTTTCGCAGAGCAGCTGCAGGAG...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CCA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCATTCCTCATCGCTAAATaGACAAGGCAGCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPFLIAK*TRQQNS
Trigger: TGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGAA...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 90 bp CGCATCTTGCCCTTCTTGGAGCGGGCACCCCGGCCGAAGGCGCCCTaGTGCAGCTCCTGGACGCGGCGGCGGTTGCGGGCAGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RILPFLERAPRPKAP*CSSWTRRRLRAESC
Trigger: GCAGCTCTCTGCCCGCAACCGCCGCCGCGTCCAGGAGCTGCAGCAGGGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CCA 90 bp TTCTTGGAGCGGGCACCCCGGCCGAAGGCGCCCTGCTGCAGCTCCTaGACGCGGCGGCGGTTGCGGGCAGAGAGCTGCTTGAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: FLERAPRPKAPCCSS*TRRRLRAESCLRPP
Trigger: TGGTGGCCTCAAGCAGCTCTCTGCCCGCAACCGCCGCCGCGTCCAGGAGCTGCAGCAGGGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS GCA 90 bp CGTCATCTTCCGCCTGGATCTCAAACTCGCCGTCCTCCGAGTCGCTaGCGCGGGCCTGGGAGGCCGCGCCTCGGCGCTTCCGGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: RHLPPGSQTRRPPSR*RGPGRPRLGASGAL
Trigger: AAGGGCTCCGGAAGCGCCGAGGCGCGGCCTCCCAGGCCCGCGGCAGCGACTCGGAGGACGGCGAGTTTGAGATCCAGGCGGAAGATGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000551344.1
CDS GCA 90 bp ATCTTGCCCTTCTTGGAGCGGGCACCCCGGCCGAAGGCGCCCTGCTaGAGCTCCTGGACGCGGCGGCGGTTGCGGGCAGAGAGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: ILPFLERAPRPKAPC*SSWTRRRLRAESCL
Trigger: CAAGCAGCTCTCTGCCCGCAACCGCCGCCGCGTCCAGGAGCTGCAGCAGGGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CCA 90 bp GCCTGGATCTCAAACTCGCCGTCCTCCGAGTCGCTGCCGCGGGCCTaGGAGGCCGCGCCTCGGCGCTTCCGGAGCCCTTTCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: AWISNSPSSESLPRA*EAAPRRFRSPFFFL
Trigger: GAGGAAGAAGAAAGGGCTCCGGAAGCGCCGAGGCGCGGCCTCCCAGGCCCGCGGCAGCGACTCGGAGGACGGCGAGTTTGAGATCCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000551344.1
CDS CCA 90 bp CTGCTTGGTCTTGAGTTCCGGGCGGACTCGGCCTGCAGGGGTGCCTaGGGCGTGGGGCCGGGATGCACCTGCTTGGCCACGGTCTCGCTT +
Preference number: 5 (lower is better)
Translates to: LLGLEFRADSACRGA*GVGPGCTCLATVSL
Trigger: AAGCGAGACCGTGGCCAAGCAGGTGCATCCCGGCCCCACGCCCCAGGCACCCCTGCAGGCCGAGTCCGCCCGGAACTCAAGACCAAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314045.11
ENST00000551912.1
CDS GCA 90 bp CCCTGCTGTCCCTGCTGGAAGCGGGCGATGGCCTTGCGGTCCTTCTaGCGCTTGGCGCGCATCACCTGGCTGCACAGGTCTCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PCCPCWKRAMALRSF*RLARITWLHRSRLE
Trigger: CTCCAGCCGAGACCTGTGCAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGCCATCGCCCGCTTCCAGCAGGGACAGCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS GCA 90 bp TCCTCCACACTCTCTCCCGCCTCCTCCTCCTCCTCCTTCTCAGGCTaGTTCTCCTGCAGTGCTGGGCGGCTCGGGGCTGGGCCCACTGGG +
Preference number: 5 (lower is better)
Translates to: SSTLSPASSSSSFSG*FSCSAGRLGAGPTG
Trigger: CCCAGTGGGCCCAGCCCCGAGCCGCCCAGCACTGCAGGAGAAGCAGCCTGAGAAGGAGGAGGAGGAGGAGGCGGGAGAGAGTGTGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS GCA 90 bp GAGCCACGGGGCTGGGTCCTGGTCCTCACATCCTCTTCCGCATCTTaGCCTTCTTGGAGCGGGCACCCCGGCCGAAGGCGCCCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: EPRGWVLVLTSSSAS*PSWSGHPGRRRPAA
Trigger: TGCAGCAGGGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGATGTGAGGACCAGGACCCAGCCCCGTGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS GCA 90 bp GCCTCCTCCCTCCGCCTCTTGGCTCCCCTGTTGGGTCCTGACCGCTaGCGCTTCCGGCCCACGACCTCTGAGAAAATGTCCGCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: ASSLRLLAPLLGPDR*RFRPTTSEKMSARE
Trigger: CTCCCGGGCGGACATTTTCTCAGAGGTCGTGGGCCGGAAGCGGCAGCGGTCAGGACCCAACAGGGGAGCCAAGAGGCGGAGGGAGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546898.1
CDS TCA 90 bp GGGGGTGCAGGCCCAGCCCCACAAGGTCCATCTCCTTGGCCCTCTTaGTGGACTCAGGCGAGGGCGCCGGGCGTGAGCGCACATACTGCT +
Preference number: 5 (lower is better)
Translates to: GGAGPAPQGPSPWPS*WTQARAPGVSAHTA
Trigger: AGCAGTATGTGCGCTCACGCCCGGCGCCCTCGCCTGAGTCCATCAAGAGGGCCAAGGAGATGGACCTTGTGGGGCTGGGCCTGCACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 90 bp ACGCGGGCCAGGCCCCGTAGCTCCAGCGATGCCTCCAGGGTGCTCTaGAGACCACTGTCCTCCTCGTCCACCACACTCTGTGGCACCCGA +
Preference number: 5 (lower is better)
Translates to: TRARPRSSSDASRVL*RPLSSSSTTLCGTR
Trigger: TCGGGTGCCACAGAGTGTGGTGGACGAGGAGGACAGTGGTCTGCAGAGCACCCTGGAGGCATCGCTGGAGCTACGGGGCCTGGCCCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 90 bp TTGATGGACTCAGGCGAGGGCGCCGGGCGTGAGCGCACATACTGCTaGTGGGCGTTATCAGCAACGCGGGCCAGGCCCCGTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LMDSGEGAGRERTYC*WALSATRARPRSSS
Trigger: GCTGGAGCTACGGGGCCTGGCCCGCGTTGCTGATAACGCCCAGCAGCAGTATGTGCGCTCACGCCCGGCGCCCTCGCCTGAGTCCATCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 90 bp CTCTTGATGGACTCAGGCGAGGGCGCCGGGCGTGAGCGCACATACTaGTGCTGGGCGTTATCAGCAACGCGGGCCAGGCCCCGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLMDSGEGAGRERTY*CWALSATRARPRSS
Trigger: GGAGCTACGGGGCCTGGCCCGCGTTGCTGATAACGCCCAGCAGCAGTATGTGCGCTCACGCCCGGCGCCCTCGCCTGAGTCCATCAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CCA 90 bp GGCTGGGTCCTGGTCCTCACATCCTCTTCCGCATCTTGCCCTTCTTaGAGCGGGCACCCCGGCCGAAGGCGCCCTGCTGCAGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GWVLVLTSSSASCPS*SGHPGRRRPAAAPG
Trigger: TCCAGGAGCTGCAGCAGGGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGATGTGAGGACCAGGACCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS-3UTR CAA 90 bp GTCGGCGAGAGGATGAGGGCGCGGGCCCCGGTCTGGGCACTGTGGGTCTTGAGCATGGCCACCACGTCCTaGCCATCCAAGATCACCGGG +
Preference number: 5 (lower is better)
Translates to: VGERMRARAPVWALWVLSMATTS*PSKITG
Trigger: CCCGGTGATCTTGGATGGCAAGGACGTGGTGGCCAT...GCTCAAGACCCACAGTGCCCAGACCGGGGCCCGCGCCCTCATCCTCTCGCCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS GCA 90 bp TCTGGGCACGCACCATCTCCCGGGTGTCCGGCTCCACATCCGAGGTaGATTCCGAGGTGGGGAAGGTGGGCAGGGGTCTTCCAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SGHAPSPGCPAPHPR*IPRWGRWAGVFQVP
Trigger: TGGGACCTGGAAGACCCCTGCCCACCTTCCCCACCTCGGAATGCACCTCGGATGTGGAGCCGGACACCCGGGAGATGGTGCGTGCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000552375.1
CDS GCA 90 bp AGGAAGTGCAGCTTCTGGGCCCGGCGCCGCTGCTTCAGGATCTGCTaGTTGGTCTTGAGTTCCGGGCGGACTCGGCCTGCAGGGGTGCCT +
Preference number: 5 (lower is better)
Translates to: RKCSFWARRRCFRIC*LVLSSGRTRPAGVP
Trigger: AGGCACCCCTGCAGGCCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCAGAAGCTGCACTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS GCA 90 bp TGCAGGAAGTGCAGCTTCTGGGCCCGGCGCCGCTGCTTCAGGATCTaGTGCTTGGTCTTGAGTTCCGGGCGGACTCGGCCTGCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: CRKCSFWARRRCFRI*CLVLSSGRTRPAGV
Trigger: CACCCCTGCAGGCCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCAGAAGCTGCACTTCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CCA 90 bp TACTCGGCGTGGTGCTTCGTGGCCACAAACACCACGGTCTGGTCCTaGGGCCGCACCACGTTGTGCAGCAGGTGGAGCAGCACGGCAGCC +
Preference number: 5 (lower is better)
Translates to: YSAWCFVATNTTVWS*GRTTLCSRWSSTAA
Trigger: GGCTGCCGTGCTGCTCCACCTGCTGCACAACGTGGTGCGGCCCCAGGACCAGACCGTGGTGTTTGTGGCCACGAAGCACCACGCCGAGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACCGGTCCTTCTGCCGCTaGGCGCGCATCACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LPPSPDTGEQREREPLRDRSFCR*ARITWL
Trigger: CAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACCG...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACCTCTTGGCTCCCCTGTaGGGTCCTGACCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LPPSPDTGEQREREPLRDLLAPL*GPDRCR
Trigger: GCGGCAGCGGTCAGGACCCAACAGGGGAGCCAAGAG...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS TCA 90 bp CATCTCCTTGGCCCTCTTGATGGACTCAGGCGAGGGCGCCGGGCGTaGGCGCACATACTGCTGCTGGGCGTTATCAGCAACGCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: HLLGPLDGLRRGRRA*AHILLLGVISNAGQ
Trigger: CTGGCCCGCGTTGCTGATAACGCCCAGCAGCAGTATGTGCGCTCACGCCCGGCGCCCTCGCCTGAGTCCATCAAGAGGGCCAAGGAGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 90 bp GCCTCCTCCCTCCGCCTCTTGGCTCCCCTGTTGGGTCCTGACCGCTaGCGCTTCCGGCCCACGACCTCTGAGAAAATGTCCTCCACACTC +
Preference number: 5 (lower is better)
Translates to: ASSLRLLAPLLGPDR*RFRPTTSEKMSSTL
Trigger: GAGTGTGGAGGACATTTTCTCAGAGGTCGTGGGCCGGAAGCGGCAGCGGTCAGGACCCAACAGGGGAGCCAAGAGGCGGAGGGAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000548786.1
ENST00000550016.5
CDS CCA 90 bp GTGAGGTACTCGGCGTGGTGCTTCGTGGCCACAAACACCACGGTCTaGTCCTGGGGCCGCACCACGTTGTGCAGCAGGTGGAGCAGCACG +
Preference number: 5 (lower is better)
Translates to: VRYSAWCFVATNTTV*SWGRTTLCSRWSST
Trigger: CGTGCTGCTCCACCTGCTGCACAACGTGGTGCGGCCCCAGGACCAGACCGTGGTGTTTGTGGCCACGAAGCACCACGCCGAGTACCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CCA 90 bp GGATGCACCTGCTTGGCCACGGTCTCGCTTCCCACCTCTTCGCTCTaGGCCTCGCCGGTCAGATGCCCCTTCTTCGTCCGAGTCACGATC +
Preference number: 5 (lower is better)
Translates to: GCTCLATVSLPTSSL*ASPVRCPFFVRVTI
Trigger: GATCGTGACTCGGACGAAGAAGGGGCATCTGACCGGCGAGGCCCAGAGCGAAGAGGTGGGAAGCGAGACCGTGGCCAAGCAGGTGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314045.11
ENST00000551912.1
CDS-3UTR CAA 90 bp GAACTTCAGGGTCTGCAGGGCCAGCTCTCGGGTCGGCGAGAGGATGAGGGCGCGAATTCCACCAGCAGTTaGGGCAGCGTGGCGGAGAAC +
Preference number: 5 (lower is better)
Translates to: ELQGLQGQLSGRREDEGANSTSS*GSVAEN
Trigger: GTTCTCCGCCACGCTGCCCAAACTGCTGGTGGAATT...CGCGCCCTCATCCTCTCGCCGACCCGAGAGCTGGCCCTGCAGACCCTGAAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CAA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCAGCAGCACGGCAGCCTaGGTGTCCTCCCGCACGAGG +
Preference number: 5 (lower is better)
Translates to: QWCTGTSADAHPKANQGASSTAA*VSSRTR
Trigger: CCTCGTGCGGGAGGACACCAAGGCTGCCGTGCTGCT...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCCGGTGCAGGAAGAGTTaGCCCTTGGCGGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGRCRKS*PLAGKL
Trigger: CAGCTTCCCCGCCAAGGGCAAACTCTTCCTGCACCG...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAAGGAAGCAGGCTGTCTaGCCACTGCCCGTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPRKQAV*PLPVRA
Trigger: GGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCCT...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCATGGGGCCGCACCACGTaGTGCAGCAGGTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPWGRTT*CSRWSS
Trigger: GCTGCTCCACCTGCTGCACAACGTGGTGCGGCCCCA...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACATCTGCTGCTTGGTCTaGAGTTCCGGGCGGACTCGG +
Preference number: 5 (lower is better)
Translates to: LPPSPDTGEQREREPLRDICCLV*SSGRTR
Trigger: CCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGAT...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTTGCCATCCAAGATCACCGGGATGGTCTTCCTCTGGATGGGTGTTGGCACCAGGAAGCAGGCTGTCTaGCCACTGCCCGTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SLPSKITGMVFLWMGVGTRKQAV*PLPVRA
Trigger: GGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCCT...GGTGCCAACACCCATCCAGAGGAAGACCATCCCGGTGATCTTGGATGGCAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CAA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCAGCTGCTCGTTGAGCTaGGTATCCACGTCAAGCCGG +
Preference number: 5 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGSCSLS*VSTSSR
Trigger: CCGGCTTGACGTGGATACCAAGCTCAACGAGCAGCT...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCAAAGCGGGCGATGGCCTaGCGGTCCTTCTGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPKRAMA*RSFCRL
Trigger: CAAGCGGCAGAAGGACCGCAAGGCCATCGCCCGCTT...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCTCCTCTGGATGGGTGTaGGCACCTTGTACCCCTTCT +
Preference number: 5 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGSSGWV*APCTPS
Trigger: AGAAGGGGTACAAGGTGCCAACACCCATCCAGAGGA...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTGGGGCCGCACCACGTaGTGCAGCAGGTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNWGRTT*CSRWSS
Trigger: GCTGCTCCACCTGCTGCACAACGTGGTGCGGCCCCA...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCTCTCGGCTGGAGGCGTaGATCTCAAAGATAGTCGCC +
Preference number: 5 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGSRLEA*ISKIVA
Trigger: GGCGACTATCTTTGAGATCAACGCCTCCAGCCGAGA...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACCCGGGATGCACCTGCTaGGCCACGGTCTCGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNPGCTC*ATVSLP
Trigger: GGGAAGCGAGACCGTGGCCAAGCAGGTGCATCCCGG...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314045.11
CDS-3UTR CAA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATTGGACGCGGCGGCGGTaGCGGGCAGAGAGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNWTRRR*RAESCL
Trigger: CAAGCAGCTCTCTGCCCGCAACCGCCGCCGCGTCCA...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTCGCATCTTGCCCTTCTaGGAGCGGGCACCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPRILPF*ERAPRP
Trigger: CGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGCG...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGGGGCCGGGATGCACCTaGGCCACGGTCTCGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQGPGCT*ATVSLP
Trigger: GGGAAGCGAGACCGTGGCCAAGGTGCATCCCGGCCC...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306014.10
CDS CCA 90 bp AGGCCCATGGACTGGAAGCCTCCAGACTTCTTCTTCTTCTTGTTCTaGGCACGCACCATCTCCCGGGTGTCCGGCTCCACATCCGAGGTG +
Preference number: 5 (lower is better)
Translates to: RPMDWKPPDFFFFLF*ARTISRVSGSTSEV
Trigger: CACCTCGGATGTGGAGCCGGACACCCGGGAGATGGTGCGTGCCCAGAACAAGAAGAAGAAGAAGTCTGGAGGCTTCCAGTCCATGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000552375.1
CDS-3UTR CAA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAATGGCCACCACGTCCTaGCCATCCAAGATCACCGGG +
Preference number: 5 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPMATTS*PSKITG
Trigger: CCCGGTGATCTTGGATGGCAAGGACGTGGTGGCCAT...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GTTGAGCTTGGTATCCACGTCAAGCCGGATGAGCACGGGCTCCGTGAGGCCAGCAGGATCAGGGCAGTCTaGAGGCCAGTGAACTTGCCT +
Preference number: 5 (lower is better)
Translates to: VELGIHVKPDEHGLREASRIRAV*RPVNLP
Trigger: AGGCAAGTTCACTGGCCTCAAGACTGCCCTGATCCT...GCTGGCCTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CAA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCGTCTTCAGCTGCTCGTaGAGCTTGGTATCCACGTCA +
Preference number: 5 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGVFSCS*SLVSTS
Trigger: TGACGTGGATACCAAGCTCAACGAGCAGCTGAAGAC...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATAGCAGCACGGCAGCCTaGGTGTCCTCCCGCACGAGG +
Preference number: 5 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNSSTAA*VSSRTR
Trigger: CCTCGTGCGGGAGGACACCAAGGCTGCCGTGCTGCT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCTTGGCGAGATTGATCTaGCGGGCTGTCGGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: QWCTGTSADAHPKANQGALARLI*RAVGSR
Trigger: CCTAGACCCGACAGCCCGCAAGATCAATCTCGCCAA...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATACACCTGAGGGCTCCTaGAGGGGTCGGGCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNTPEGS*RGRARV
Trigger: CACCCTCGCCCGACCCCTCAAGGAGCCCTCAGGTGT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGACACCTGAGGGCTCCTaGAGGGGTCGGGCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQTPEGS*RGRARV
Trigger: CACCCTCGCCCGACCCCTCAAGGAGCCCTCAGGTGT...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAATCTCCTTGGCCCTCTaGATGGACTCAGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPISLAL*MDSGEG
Trigger: GCCCTCGCCTGAGTCCATCAAGAGGGCCAAGGAGAT...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGATCTCCTTGGCCCTCTaGATGGACTCAGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRISLAL*MDSGEG
Trigger: GCCCTCGCCTGAGTCCATCAAGAGGGCCAAGGAGAT...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCACAAGGTCCATCTCCTaGGCCCTCTTGATGGACTCA +
Preference number: 5 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGTRSIS*ALLMDS
Trigger: TGAGTCCATCAAGAGGGCCAAGGAGATGGACCTTGT...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCCGGTCCTTCTGCCGCTaGGCGCGCATCACCTGGCTG +
Preference number: 5 (lower is better)
Translates to: NPEHMEAAAAELPTQVLARSFCR*ARITWL
Trigger: CAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACCG...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGCTCTTGGCTCCCCTGTaGGGTCCTGACCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQLLAPL*GPDRCR
Trigger: GCGGCAGCGGTCAGGACCCAACAGGGGAGCCAAGAG...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGCGGGCAGAGAGCTGCTaGAGGCCACCACGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQRAESC*RPPRCR
Trigger: CCTGCAGCGTGGTGGCCTCAAGCAGCTCTCTGCCCG...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp CTGCCTCCTAGCCCTGACACAGGTGAGCAGCGGGAGAGGGAACCCCTGAGAGACGAATCCGTTTCCTCATaGGGAAGATGGGAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LPPSPDTGEQREREPLRDESVSS*GRWEGC
Trigger: ACAGCCCTCCCATCTTCCCAATGAGGAAACGGATTC...GTCTCTCAGGGGTTCCCTCTCCCGCTGCTCACCTGTGTCAGGGCTAGGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCACGGGGCGACTTCTTCTTCTTCTaGTTCTGGGCACGCACCATC +
Preference number: 5 (lower is better)
Translates to: ARERLLMPTLRPIKEPRGDFFFF*FWARTI
Trigger: GATGGTGCGTGCCCAGAACAAGAAGAAGAAGAAGTC...GCCCCGTGGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCTCCTCTGGATGGGTGTaGGCACCTTGTACCCCTTCT +
Preference number: 5 (lower is better)
Translates to: QWCTGTSADAHPKANQGASSGWV*APCTPS
Trigger: AGAAGGGGTACAAGGTGCCAACACCCATCCAGAGGA...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAAATTCCACCAGCAGTTaGGGCAGCGTGGCGGAGAAC +
Preference number: 5 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPNSTSS*GSVAEN
Trigger: GTTCTCCGCCACGCTGCCCAAACTGCTGGTGGAATT...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAAAGCGGGCGATGGCCTaGCGGTCCTTCTGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKKRAMA*RSFCRL
Trigger: CAAGCGGCAGAAGGACCGCAAGGCCATCGCCCGCTT...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCATTCAGGATCTGCTGCTaGGTCTTGAGTTCCGGGCGG +
Preference number: 5 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPFRICC*VLSSGR
Trigger: CCGCCCGGAACTCAAGACCAAGCAGCAGATCCTGAA...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGTTCAGGATCTGCTGCTaGGTCTTGAGTTCCGGGCGG +
Preference number: 5 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRFRICC*VLSSGR
Trigger: CCGCCCGGAACTCAAGACCAAGCAGCAGATCCTGAA...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCAATCCTCTTCCGCATCTaGCCCTTCTTGGAGCGGGCA +
Preference number: 5 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPILFRI*PFLERA
Trigger: TGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGAT...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCTTGCCAACTCAAGTCTaGGCCTGCCTGGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: QWCTGTSADAHPKANQGALPTQV*ACLALL
Trigger: CAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCAA...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTGCTGGGGCTGCCCTaGACCTTCTCAGAACCTCAA +
Preference number: 5 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRLLGLP*TFSEPQ
Trigger: TTGAGGTTCTGAGAAGGTCAAGGGCAGCCCCAGCAG...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTTGCCATCCAAGATCACCGGGATGGTCTTCCTCTGGATGGGTGTTGGCACCAGCTGCTCGTTGAGCTaGGTATCCACGTCAAGCCGG +
Preference number: 5 (lower is better)
Translates to: SLPSKITGMVFLWMGVGTSCSLS*VSTSSR
Trigger: CCGGCTTGACGTGGATACCAAGCTCAACGAGCAGCT...GGTGCCAACACCCATCCAGAGGAAGACCATCCCGGTGATCTTGGATGGCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CAA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAACGGTGCAGGAAGAGTTaGCCCTTGGCGGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKRCRKS*PLAGKL
Trigger: CAGCTTCCCCGCCAAGGGCAAACTCTTCCTGCACCG...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGTTCTTACGGTCCCACTaGAGCTGCTGCCGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQFLRSH*SCCRPL
Trigger: GAGGGGCCGGCAGCAGCTCAAGTGGGACCGTAAGAA...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 90 bp ACGGTCTCGCTTCCCACCTCTTCGCTCTGGGCCTCGCCGGTCAGATaGCCCTTCTTCGTCCGAGTCACGATCATCAATTTTCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: TVSLPTSSLWASPVR*PFFVRVTIINFLFL
Trigger: CAGAAACAGAAAATTGATGATCGTGACTCGGACGAAGAAGGGGCATCTGACCGGCGAGGCCCAGAGCGAAGAGGTGGGAAGCGAGACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS-3UTR CAA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATATGGCCACCACGTCCTaGCCATCCAAGATCACCGGG +
Preference number: 5 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNMATTS*PSKITG
Trigger: CCCGGTGATCTTGGATGGCAAGGACGTGGTGGCCAT...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTTGGGCACTGTGGGTCTaGAGCCGCTCGAACATTGGG +
Preference number: 5 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPWALWV*SRSNIG
Trigger: CCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCCA...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCTGGGCACTGTGGGTCTaGAGCCGCTCGAACATTGGG +
Preference number: 5 (lower is better)
Translates to: NPEHMEAAAAELPTQVLAWALWV*SRSNIG
Trigger: CCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCCA...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp CAGTGGTGCACGGGAACGTCTGCTGATGCCCACCCTAAGGCCAATCAAGGAGCCTTGAGGCCAGTGAACTaGCCTAGCTCCTTAGTGAAC +
Preference number: 5 (lower is better)
Translates to: QWCTGTSADAHPKANQGALRPVN*PSSLVN
Trigger: GTTCACTAAGGAGCTAGGCAAGTTCACTGGCCTCAA...GGCTCCTTGATTGGCCTTAGGGTGGGCATCAGCAGACGTTCCCGTGCACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TGCTCGTTGAGCTTGGTATCCACGTCAAGCCGGATGAGCACGGGCTCCGTGAGGTTGAGGCCAGTGAACTaGCCTAGCTCCTTAGTGAAC +
Preference number: 5 (lower is better)
Translates to: CSLSLVSTSSRMSTGSVRLRPVN*PSSLVN
Trigger: GTTCACTAAGGAGCTAGGCAAGTTCACTGGCCTCAA...CCTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CAA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACAGGATCAGGGCAGTCTaGAGGCCAGTGAACTTGCCT +
Preference number: 5 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHRIRAV*RPVNLP
Trigger: AGGCAAGTTCACTGGCCTCAAGACTGCCCTGATCCT...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTCATCGCTAAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACAATTCCACCAGCAGTTaGGGCAGCGTGGCGGAGAAC +
Preference number: 5 (lower is better)
Translates to: SSSLNGQGSRTHPQETRNNSTSS*GSVAEN
Trigger: GTTCTCCGCCACGCTGCCCAAACTGCTGGTGGAATT...GTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTTAGCGATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACGTGAATTTGGCGAGATaGATCTTGCGGGCTGTCGGG +
Preference number: 5 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHVNLAR*ILRAVG
Trigger: CCCGACAGCCCGCAAGATCAATCTCGCCAAATTCAC...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAATGAGAGTGGAGCACTaGCCAAGCGTGAATTTGGCG +
Preference number: 5 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPMRVEH*PSVNLA
Trigger: CGCCAAATTCACGCTTGGCAAGTGCTCCACTCTCAT...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCATCTGCTGCTTGGTCTaGAGTTCCGGGCGGACTCGG +
Preference number: 5 (lower is better)
Translates to: NPEHMEAAAAELPTQVLAICCLV*SSGRTR
Trigger: CCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGAT...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCAGACTTCTTCTTCTTCTaGTTCTGGGCACGCACCATC +
Preference number: 5 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPDFFFF*FWARTI
Trigger: GATGGTGCGTGCCCAGAACAAGAAGAAGAAGAAGTC...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp ACAGTGCTCCTTTTCACAGATGATGGCTCCTGCAGGGAGTGCCCCCAGTGCCCAATGGGTGTTGGCACCTaGTACCCCTTCTTCATGATG +
Preference number: 5 (lower is better)
Translates to: TVLLFTDDGSCRECPQCPMGVGT*YPFFMM
Trigger: CATCATGAAGAAGGGGTACAAGGTGCCAACACCCAT...TGGGCACTGGGGGCACTCCCTGCAGGAGCCATCATCTGTGAAAAGGAGCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GTACCTGGGTCTCTCCATTCCAGTTCCCCAAGTAGACCGCACTCCTGGCCACCAATGGGTGTTGGCACCTaGTACCCCTTCTTCATGATG +
Preference number: 5 (lower is better)
Translates to: VPGSLHSSSPSRPHSWPPMGVGT*YPFFMM
Trigger: CATCATGAAGAAGGGGTACAAGGTGCCAACACCCAT...TGGTGGCCAGGAGTGCGGTCTACTTGGGGAACTGGAATGGAGAGACCCAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp CTGTGGGTCTTGAGCCGCTCGAACATTGGGAGGAGGAAGCAGGCTGTCTTGCCAATGGGTGTTGGCACCTaGTACCCCTTCTTCATGATG +
Preference number: 5 (lower is better)
Translates to: LWVLSRSNIGRRKQAVLPMGVGT*YPFFMM
Trigger: CATCATGAAGAAGGGGTACAAGGTGCCAACACCCAT...TGGCAAGACAGCCTGCTTCCTCCTCCCAATGTTCGAGCGGCTCAAGACCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CAA 90 bp CCCAGGATCAGGGCAGTCTTGAGGCCAGTGAACTTGCCTAGCTCCTTAGTGAACTCCTCTGGATGGGTGTaGGCACCTTGTACCCCTTCT +
Preference number: 5 (lower is better)
Translates to: PRIRAVLRPVNLPSSLVNSSGWV*APCTPS
Trigger: AGAAGGGGTACAAGGTGCCAACACCCATCCAGAGGA...GTTCACTAAGGAGCTAGGCAAGTTCACTGGCCTCAAGACTGCCCTGATCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CAA 90 bp GTCTTCCTCTGGATGGGTGTTGGCACCTTGTACCCCTTCTTCATGATGCCTTTGTGGGCACTGTGGGTCTaGAGCCGCTCGAACATTGGG +
Preference number: 5 (lower is better)
Translates to: VFLWMGVGTLYPFFMMPLWALWV*SRSNIG
Trigger: CCCAATGTTCGAGCGGCTCAAGACCCACAGTGCCCA...CAAAGGCATCATGAAGAAGGGGTACAAGGTGCCAACACCCATCCAGAGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551344.1
CDS-3UTR CAA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAAGCTGCTCGTTGAGCTaGGTATCCACGTCAAGCCGG +
Preference number: 5 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKSCSLS*VSTSSR
Trigger: CCGGCTTGACGTGGATACCAAGCTCAACGAGCAGCT...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTTTGGCGAGATTGATCTaGCGGGCTGTCGGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPLARLI*RAVGSR
Trigger: CCTAGACCCGACAGCCCGCAAGATCAATCTCGCCAA...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGTTGCCAAGCGTGAATTaGGCGAGATTGATCTTGCGG +
Preference number: 5 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRLPSVN*ARLILR
Trigger: CCGCAAGATCAATCTCGCCAAATTCACGCTTGGCAA...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGATCCTCTTCCGCATCTaGCCCTTCTTGGAGCGGGCA +
Preference number: 5 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQILFRI*PFLERA
Trigger: TGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGAT...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GATAGGAGGGCCCACATTTCCAATGGGGTGTGGACTGAGTGGCTCTTCCTGAATCTGCTGGGGCTGCCCTaGACCTTCTCAGAACCTCAA +
Preference number: 5 (lower is better)
Translates to: DRRAHISNGVWTEWLFLNLLGLP*TFSEPQ
Trigger: TTGAGGTTCTGAGAAGGTCAAGGGCAGCCCCAGCAG...ATTCAGGAAGAGCCACTCAGTCCACACCCCATTGGAAATGTGGGCCCTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AAATGGACAAGGCAGCAGAACTCACCCTCAGGAGACCCGCAACTCCTCTGCCACGAATCCGTTTCCTCATaGGGAAGATGGGAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: KWTRQQNSPSGDPQLLCHESVSS*GRWEGC
Trigger: ACAGCCCTCCCATCTTCCCAATGAGGAAACGGATTC...GTGGCAGAGGAGTTGCGGGTCTCCTGAGGGTGAGTTCTGCTGCCTTGTCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TCCTGCACACCCTTCAAGGCCCTGTTCAAATGTCTCTGTCTTAGGCTGACGCAGAGGATCAGGGCAGTCTaGAGGCCAGTGAACTTGCCT +
Preference number: 5 (lower is better)
Translates to: SCTPFKALFKCLCLRLTQRIRAV*RPVNLP
Trigger: AGGCAAGTTCACTGGCCTCAAGACTGCCCTGATCCT...CTGCGTCAGCCTAAGACAGAGACATTTGAACAGGGCCTTGAAGGGTGTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAGTGAATTTGGCGAGATaGATCTTGCGGGCTGTCGGG +
Preference number: 5 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKVNLAR*ILRAVG
Trigger: CCCGACAGCCCGCAAGATCAATCTCGCCAAATTCAC...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATCGCATCTTGCCCTTCTaGGAGCGGGCACCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYRILPF*ERAPRP
Trigger: CGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGCG...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATAGGAAGCAGGCTGTCTaGCCACTGCCCGTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYRKQAV*PLPVRA
Trigger: GGCCCGGACGGGCAGTGGCAAGACAGCCTGCTTCCT...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAATGAGAGTGGAGCACTaGCCAAGCGTGAATTTGGCG +
Preference number: 5 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKMRVEH*PSVNLA
Trigger: CGCCAAATTCACGCTTGGCAAGTGCTCCACTCTCAT...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AACCCAGAACACATGGAAGCAGCAGCAGCTGAGTTGCCAACTCAAGTCTTGGCCACAAGGTCCATCTCCTaGGCCCTCTTGATGGACTCA +
Preference number: 5 (lower is better)
Translates to: NPEHMEAAAAELPTQVLATRSIS*ALLMDS
Trigger: TGAGTCCATCAAGAGGGCCAAGGAGATGGACCTTGT...GGCCAAGACTTGAGTTGGCAACTCAGCTGCTGCTGCTTCCATGTGTTCTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATCGGGCAGAGAGCTGCTaGAGGCCACCACGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYRAESC*RPPRCR
Trigger: CCTGCAGCGTGGTGGCCTCAAGCAGCTCTCTGCCCG...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAACCTCTGGCACCTGGTTaGTGCTCTGAGCTTCACTTT +
Preference number: 5 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKPLAPG*CSELHF
Trigger: AAAGTGAAGCTCAGAGCACAAACCAGGTGCCAGAGG...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCAAGGCCCCCTTTGAGGCCAGTGAACTaGCCTAGCTCCTTAGTGAAC +
Preference number: 5 (lower is better)
Translates to: LSGLRTGSMLDERSPRPPLRPVN*PSSLVN
Trigger: GTTCACTAAGGAGCTAGGCAAGTTCACTGGCCTCAA...AGGGGGCCTTGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCATTCTTACGGTCCCACTaGAGCTGCTGCCGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPFLRSH*SCCRPL
Trigger: GAGGGGCCGGCAGCAGCTCAAGTGGGACCGTAAGAA...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp GAGGAAGCTGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGGTCTTAATCTTCTTCTaGTCTTCCTGTCCTGACTGT +
Preference number: 5 (lower is better)
Translates to: EEAVKVSAHAAVGKVGLRVLIFF*SSCPDC
Trigger: ACAGTCAGGACAGGAAGACAAGAAGAAGATTAAGAC...CCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACAGCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp TGTGAAGGTGTCTGCTCACGCAGCAGTTGGGAAGGTTGGCCTGAGGCTTTCAAAGTCTTAATCTTCTTCTaGTCTTCCTGTCCTGACTGT +
Preference number: 5 (lower is better)
Translates to: CEGVCSRSSWEGWPEAFKVLIFF*SSCPDC
Trigger: ACAGTCAGGACAGGAAGACAAGAAGAAGATTAAGAC...TTTGAAAGCCTCAGGCCAACCTTCCCAACTGCTGCGTGAGCAGACACCTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATTCTCGGCTGGAGGCGTaGATCTCAAAGATAGTCGCC +
Preference number: 5 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYSRLEA*ISKIVA
Trigger: GGCGACTATCTTTGAGATCAACGCCTCCAGCCGAGA...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATTTGCCAACTCAAGTCTaGGCCTGCCTGGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYLPTQV*ACLALL
Trigger: CAGCAAAGCCAGGCAGGCCAAGACTTGAGTTGGCAA...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AACAAAAGGAGAGCCACCCACGGAGATAAGAGTAGGTCACAAACCAATGAATATGTCTTCAGCTGCTCGTaGAGCTTGGTATCCACGTCA +
Preference number: 5 (lower is better)
Translates to: NKRRATHGDKSRSQTNEYVFSCS*SLVSTS
Trigger: TGACGTGGATACCAAGCTCAACGAGCAGCTGAAGAC...ATATTCATTGGTTTGTGACCTACTCTTATCTCCGTGGGTGGCTCTCCTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS-3UTR CAA 90 bp AAAAACTCTTTGTCAGGTCTCAGAACAGGGTCCATGCTAGATGAGAGATCACCATTGCCAAGCGTGAATTaGGCGAGATTGATCTTGCGG +
Preference number: 5 (lower is better)
Translates to: KNSLSGLRTGSMLDERSPLPSVN*ARLILR
Trigger: CCGCAAGATCAATCTCGCCAAATTCACGCTTGGCAA...TGGTGATCTCTCATCTAGCATGGACCCTGTTCTGAGACCTGACAAAGAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 72 bp CCCTTCTTGGAGCGGGCACCCCGGCCGAAGGCGCCCTaGTGCAGCTCCTGGACGCGGCGGCGGTTGCGGGCA +
Preference number: 6 (lower is better)
Translates to: PFLERAPRPKAP*CSSWTRRRLRA
Trigger: TGCCCGCAACCGCCGCCGCGTCCAGGAGCTGCAGCAGGGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CCA 72 bp CGGGCACCCCGGCCGAAGGCGCCCTGCTGCAGCTCCTaGACGCGGCGGCGGTTGCGGGCAGAGAGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: RAPRPKAPCCSS*TRRRLRAESCL
Trigger: CAAGCAGCTCTCTGCCCGCAACCGCCGCCGCGTCCAGGAGCTGCAGCAGGGCGCCTTCGGCCGGGGTGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CAA 72 bp ATGGCAGCTCGCGACCGAGGTCCAGCCGCCGGGCCCTaGTCGGCCGCCATTCGGGCCGCGCGCTGGGAACGC +
Preference number: 6 (lower is better)
Translates to: MAARDRGPAAGP*SAAIRAARWER
Trigger: GCGTTCCCAGCGCGCGGCCCGAATGGCGGCCGACAAGGGCCCGGCGGCTGGACCTCGGTCGCGAGCTGCCAT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 72 bp CCGCCTGGATCTCAAACTCGCCGTCCTCCGAGTCGCTaGCGCGGGCCTGGGAGGCCGCGCCTCGGCGCTTCC +
Preference number: 6 (lower is better)
Translates to: PPGSQTRRPPSR*RGPGRPRLGAS
Trigger: GGAAGCGCCGAGGCGCGGCCTCCCAGGCCCGCGGCAGCGACTCGGAGGACGGCGAGTTTGAGATCCAGGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000551344.1
CDS GCA 72 bp TTCTTGGAGCGGGCACCCCGGCCGAAGGCGCCCTGCTaGAGCTCCTGGACGCGGCGGCGGTTGCGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: FLERAPRPKAPC*SSWTRRRLRAE
Trigger: CTCTGCCCGCAACCGCCGCCGCGTCCAGGAGCTGCAGCAGGGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CCA 72 bp TCAAACTCGCCGTCCTCCGAGTCGCTGCCGCGGGCCTaGGAGGCCGCGCCTCGGCGCTTCCGGAGCCCTTTC +
Preference number: 6 (lower is better)
Translates to: SNSPSSESLPRA*EAAPRRFRSPF
Trigger: GAAAGGGCTCCGGAAGCGCCGAGGCGCGGCCTCCCAGGCCCGCGGCAGCGACTCGGAGGACGGCGAGTTTGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000551344.1
CDS CCA 72 bp GCCGGGCCTCCTCCCTCCGCCTCTTGGCTCCCCTGTTaGGTCCTGACCGCTGCCGCTTCCGGCCCACGACCT +
Preference number: 6 (lower is better)
Translates to: AGPPPSASWLPC*VLTAAASGPRP
Trigger: AGGTCGTGGGCCGGAAGCGGCAGCGGTCAGGACCCAACAGGGGAGCCAAGAGGCGGAGGGAGGAGGCCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000546898.1
ENST00000548786.1
ENST00000550016.5
CDS CCA 72 bp GGCGAGGGCGCCGGGCGTGAGCGCACATACTGCTGCTaGGCGTTATCAGCAACGCGGGCCAGGCCCCGTAGC +
Preference number: 6 (lower is better)
Translates to: GEGAGRERTYCC*ALSATRARPRS
Trigger: GCTACGGGGCCTGGCCCGCGTTGCTGATAACGCCCAGCAGCAGTATGTGCGCTCACGCCCGGCGCCCTCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 72 bp TCAGGCGAGGGCGCCGGGCGTGAGCGCACATACTGCTaGTGGGCGTTATCAGCAACGCGGGCCAGGCCCCGT +
Preference number: 6 (lower is better)
Translates to: SGEGAGRERTYC*WALSATRARPR
Trigger: ACGGGGCCTGGCCCGCGTTGCTGATAACGCCCAGCAGCAGTATGTGCGCTCACGCCCGGCGCCCTCGCCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 72 bp GACTCAGGCGAGGGCGCCGGGCGTGAGCGCACATACTaGTGCTGGGCGTTATCAGCAACGCGGGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: DSGEGAGRERTY*CWALSATRARP
Trigger: GGGCCTGGCCCGCGTTGCTGATAACGCCCAGCAGCAGTATGTGCGCTCACGCCCGGCGCCCTCGCCTGAGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CCA 72 bp CCTGCCGCCCCTGCTGTCCCTGCTGGAAGCGGGCGATaGCCTTGCGGTCCTTCTGCCGCTTGGCGCGCATCA +
Preference number: 6 (lower is better)
Translates to: PAAPAVPAGSGR*PCGPSAAWRAS
Trigger: TGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGCCATCGCCCGCTTCCAGCAGGGACAGCAGGGGCGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS CAA 72 bp CGCCCCTGCTGTCCCTGCTGGAAGCGGGCGATGGCCTaGCGGTCCTTCTGCCGCTTGGCGCGCATCACCTGG +
Preference number: 6 (lower is better)
Translates to: RPCCPCWKRAMA*RSFCRLARITW
Trigger: CCAGGTGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGCCATCGCCCGCTTCCAGCAGGGACAGCAGGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS CAA 90 bp TGCTCCTGCCGCCCCTGCTGTCCCTGCTGGAAGCGGGCGATGGCCTaGCGGTCCTTCTGCCGCTTGGCGCGCATCACCTGGCTGCACAGG +
Preference number: 6 (lower is better)
Translates to: CSCRPCCPCWKRAMA*RSFCRLARITWLHR
Trigger: CCTGTGCAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGCCATCGCCCGCTTCCAGCAGGGACAGCAGGGGCGGCAGGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS CAA 90 bp AGCTTCTGGGCCCGGCGCCGCTGCTTCAGGATCTGCTGCTTGGTCTaGAGTTCCGGGCGGACTCGGCCTGCAGGGGTGCCTGGGGCGTGG +
Preference number: 6 (lower is better)
Translates to: SFWARRRCFRICCLV*SSGRTRPAGVPGAW
Trigger: CCACGCCCCAGGCACCCCTGCAGGCCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCAGAAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CAA 90 bp GGAGCCACGGGGCTGGGTCCTGGTCCTCACATCCTCTTCCGCATCTaGCCCTTCTTGGAGCGGGCACCCCGGCCGAAGGCGCCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GATGLGPGPHILFRI*PFLERAPRPKAPCC
Trigger: GCAGCAGGGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGATGTGAGGACCAGGACCCAGCCCCGTGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CAA 90 bp GAGCTGAAGAGGGGGTGCAGGCCCAGCCCCACAAGGTCCATCTCCTaGGCCCTCTTGATGGACTCAGGCGAGGGCGCCGGGCGTGAGCGC +
Preference number: 6 (lower is better)
Translates to: ELKRGCRPSPTRSIS*ALLMDSGEGAGRER
Trigger: GCGCTCACGCCCGGCGCCCTCGCCTGAGTCCATCAAGAGGGCCAAGGAGATGGACCTTGTGGGGCTGGGCCTGCACCCCCTCTTCAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CAA 90 bp GGGCTGGGTCCTGGTCCTCACATCCTCTTCCGCATCTTGCCCTTCTaGGAGCGGGCACCCCGGCCGAAGGCGCCCTGCTGCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GLGPGPHILFRILPF*ERAPRPKAPCCSSW
Trigger: CCAGGAGCTGCAGCAGGGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGATGTGAGGACCAGGACCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS GCA 72 bp CTCTCTCCCGCCTCCTCCTCCTCCTCCTTCTCAGGCTaGTTCTCCTGCAGTGCTGGGCGGCTCGGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LSPASSSSSFSG*FSCSAGRLGAG
Trigger: CCCAGCCCCGAGCCGCCCAGCACTGCAGGAGAAGCAGCCTGAGAAGGAGGAGGAGGAGGAGGCGGGAGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS CCA 72 bp GGTCCCAGCTTCCGGGCCCGGGCGTCATCTTCCGCCTaGATCTCAAACTCGCCGTCCTCCGAGTCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: GPSFRARASSSA*ISNSPSSESLP
Trigger: CGGCAGCGACTCGGAGGACGGCGAGTTTGAGATCCAGGCGGAAGATGACGCCCGGGCCCGGAAGCTGGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000551344.1
CDS CCA 72 bp GGAAGCGGGCGATGGCCTTGCGGTCCTTCTGCCGCTTaGCGCGCATCACCTGGCTGCACAGGTCTCGGCTGG +
Preference number: 6 (lower is better)
Translates to: GSGRWPCGPSAA*RASPGCTGLGW
Trigger: CCAGCCGAGACCTGTGCAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGCCATCGCCCGCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS CAA 72 bp AGGGGGTGCAGGCCCAGCCCCACAAGGTCCATCTCCTaGGCCCTCTTGATGGACTCAGGCGAGGGCGCCGGG +
Preference number: 6 (lower is better)
Translates to: RGCRPSPTRSIS*ALLMDSGEGAG
Trigger: CCCGGCGCCCTCGCCTGAGTCCATCAAGAGGGCCAAGGAGATGGACCTTGTGGGGCTGGGCCTGCACCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CAA 72 bp GCCCGGCGCCGCTGCTTCAGGATCTGCTGCTTGGTCTaGAGTTCCGGGCGGACTCGGCCTGCAGGGGTGCCT +
Preference number: 6 (lower is better)
Translates to: ARRRCFRICCLV*SSGRTRPAGVP
Trigger: AGGCACCCCTGCAGGCCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CAA 90 bp AGGGGGTGCAGGCCCAGCCCCACAAGGTCCATCTCCTTGGCCCTCTaGATGGACTCAGGCGAGGGCGCCGGGCGTGAGCGCACATACTGC +
Preference number: 6 (lower is better)
Translates to: RGCRPSPTRSISLAL*MDSGEGAGRERTYC
Trigger: GCAGTATGTGCGCTCACGCCCGGCGCCCTCGCCTGAGTCCATCAAGAGGGCCAAGGAGATGGACCTTGTGGGGCTGGGCCTGCACCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CAA 90 bp TGTCCCTGCTGGAAGCGGGCGATGGCCTTGCGGTCCTTCTGCCGCTaGGCGCGCATCACCTGGCTGCACAGGTCTCGGCTGGAGGCGTTG +
Preference number: 6 (lower is better)
Translates to: CPCWKRAMALRSFCR*ARITWLHRSRLEAL
Trigger: CAACGCCTCCAGCCGAGACCTGTGCAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGCCATCGCCCGCTTCCAGCAGGGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS CAA 90 bp AAGTGCAGCTTCTGGGCCCGGCGCCGCTGCTTCAGGATCTGCTGCTaGGTCTTGAGTTCCGGGCGGACTCGGCCTGCAGGGGTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: KCSFWARRRCFRICC*VLSSGRTRPAGVPG
Trigger: CCCAGGCACCCCTGCAGGCCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCAGAAGCTGCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS GCA 72 bp CCCTGCTGGAAGCGGGCGATGGCCTTGCGGTCCTTCTaGCGCTTGGCGCGCATCACCTGGCTGCACAGGTCT +
Preference number: 6 (lower is better)
Translates to: PCWKRAMALRSF*RLARITWLHRS
Trigger: AGACCTGTGCAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGCCATCGCCCGCTTCCAGCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS GCA 72 bp AGCTCCTGGACGCGGCGGCGGTTGCGGGCAGAGAGCTaGTTGAGGCCACCACGCTGCAGGAAGTGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SSWTRRRLRAES*LRPPRCRKCSF
Trigger: GAAGCTGCACTTCCTGCAGCGTGGTGGCCTCAAGCAGCTCTCTGCCCGCAACCGCCGCCGCGTCCAGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS GCA 72 bp GGCTGGGTCCTGGTCCTCACATCCTCTTCCGCATCTTaGCCTTCTTGGAGCGGGCACCCCGGCCGAAGGCGC +
Preference number: 6 (lower is better)
Translates to: GWVLVLTSSSAS*PSWSGHPGRRR
Trigger: GCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGATGTGAGGACCAGGACCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CAA 72 bp TGGAAGCGGGCGATGGCCTTGCGGTCCTTCTGCCGCTaGGCGCGCATCACCTGGCTGCACAGGTCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: WKRAMALRSFCR*ARITWLHRSRL
Trigger: CAGCCGAGACCTGTGCAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGCCATCGCCCGCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS CAA 72 bp TTCTGGGCCCGGCGCCGCTGCTTCAGGATCTGCTGCTaGGTCTTGAGTTCCGGGCGGACTCGGCCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: FWARRRCFRICC*VLSSGRTRPAG
Trigger: CCCTGCAGGCCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CAA 72 bp TCCTGGACGCGGCGGCGGTTGCGGGCAGAGAGCTGCTaGAGGCCACCACGCTGCAGGAAGTGCAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SWTRRRLRAESC*RPPRCRKCSFW
Trigger: CCAGAAGCTGCACTTCCTGCAGCGTGGTGGCCTCAAGCAGCTCTCTGCCCGCAACCGCCGCCGCGTCCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CAA 72 bp GGGCTGGGTCCTGGTCCTCACATCCTCTTCCGCATCTaGCCCTTCTTGGAGCGGGCACCCCGGCCGAAGGCG +
Preference number: 6 (lower is better)
Translates to: GLGPGPHILFRI*PFLERAPRPKA
Trigger: CGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGATGTGAGGACCAGGACCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS GCA 72 bp AGGGGATTTCATCAGGGGCCACCAAGGAGTAGGCTGTaGCACTTCGGCCAGCCCGAGCCACACGGCCCACGC +
Preference number: 6 (lower is better)
Translates to: RGFHQGPPRSRL*HFGQPEPHGPR
Trigger: GCGTGGGCCGTGTGGCTCGGGCTGGCCGAAGTGGCACAGCCTACTCCTTGGTGGCCCCTGATGAAATCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 72 bp AGCTTCTGGGCCCGGCGCCGCTGCTTCAGGATCTGCTaGTTGGTCTTGAGTTCCGGGCGGACTCGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: SFWARRRCFRIC*LVLSSGRTRPA
Trigger: TGCAGGCCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCAGAAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS GCA 72 bp TGCAGCTTCTGGGCCCGGCGCCGCTGCTTCAGGATCTaGTGCTTGGTCTTGAGTTCCGGGCGGACTCGGCCT +
Preference number: 6 (lower is better)
Translates to: CSFWARRRCFRI*CLVLSSGRTRP
Trigger: AGGCCGAGTCCGCCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCAGAAGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CCA 72 bp GGGTGTCCGGCTCCACATCCGAGGTGCATTCCGAGGTaGGGAAGGTGGGCAGGGGTCTTCCAGGTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: GCPAPHPRCIPR*GRWAGVFQVPA
Trigger: AGCTGGGACCTGGAAGACCCCTGCCCACCTTCCCCACCTCGGAATGCACCTCGGATGTGGAGCCGGACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000551344.1
CDS CCA 72 bp TCGGCGTGGTGCTTCGTGGCCACAAACACCACGGTCTaGTCCTGGGGCCGCACCACGTTGTGCAGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: SAWCFVATNTTV*SWGRTTLCSRW
Trigger: CCACCTGCTGCACAACGTGGTGCGGCCCCAGGACCAGACCGTGGTGTTTGTGGCCACGAAGCACCACGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CCA 72 bp CTGGTCCTCACATCCTCTTCCGCATCTTGCCCTTCTTaGAGCGGGCACCCCGGCCGAAGGCGCCCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LVLTSSSASCPS*SGHPGRRRPAA
Trigger: TGCAGCAGGGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATGCGGAAGAGGATGTGAGGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS TCA 72 bp GGCCCTCTTGATGGACTCAGGCGAGGGCGCCGGGCGTaGGCGCACATACTGCTGCTGGGCGTTATCAGCAAC +
Preference number: 6 (lower is better)
Translates to: GPLDGLRRGRRA*AHILLLGVISN
Trigger: GTTGCTGATAACGCCCAGCAGCAGTATGTGCGCTCACGCCCGGCGCCCTCGCCTGAGTCCATCAAGAGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 72 bp CGCTGCAGGAAGTGCAGCTTCTGGGCCCGGCGCCGCTaGTTCAGGATCTGCTGCTTGGTCTTGAGTTCCGGG +
Preference number: 6 (lower is better)
Translates to: RCRKCSFWARRR*FRICCLVLSSG
Trigger: CCCGGAACTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCAGAAGCTGCACTTCCTGCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CCA 72 bp TGGTGCTTCGTGGCCACAAACACCACGGTCTGGTCCTaGGGCCGCACCACGTTGTGCAGCAGGTGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: WCFVATNTTVWS*GRTTLCSRWSS
Trigger: GCTGCTCCACCTGCTGCACAACGTGGTGCGGCCCCAGGACCAGACCGTGGTGTTTGTGGCCACGAAGCACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CCA 72 bp CTGCAGACCACTGTCCTCCTCGTCCACCACACTCTGTaGCACCCGACCCAGCATGCCATCCACACCGGCCAC +
Preference number: 6 (lower is better)
Translates to: LQTTVLLVHHTL*HPTQHAIHTGH
Trigger: GTGGCCGGTGTGGATGGCATGCTGGGTCGGGTGCCACAGAGTGTGGTGGACGAGGAGGACAGTGGTCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CCA 72 bp GCCTTGCGGTCCTTCTGCCGCTTGGCGCGCATCACCTaGCTGCACAGGTCTCGGCTGGAGGCGTTGATCTCA +
Preference number: 6 (lower is better)
Translates to: ALRSFCRLARIT*LHRSRLEALIS
Trigger: TGAGATCAACGCCTCCAGCCGAGACCTGTGCAGCCAGGTGATGCGCGCCAAGCGGCAGAAGGACCGCAAGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000550016.5
CDS CCA 72 bp TGCTTGGCCACGGTCTCGCTTCCCACCTCTTCGCTCTaGGCCTCGCCGGTCAGATGCCCCTTCTTCGTCCGA +
Preference number: 6 (lower is better)
Translates to: CLATVSLPTSSL*ASPVRCPFFVR
Trigger: TCGGACGAAGAAGGGGCATCTGACCGGCGAGGCCCAGAGCGAAGAGGTGGGAAGCGAGACCGTGGCCAAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314045.11
ENST00000551912.1
CDS CCA 72 bp TGCTTGAGGCCACCACGCTGCAGGAAGTGCAGCTTCTaGGCCCGGCGCCGCTGCTTCAGGATCTGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: CLRPPRCRKCSF*ARRRCFRICCL
Trigger: CAAGCAGCAGATCCTGAAGCAGCGGCGCCGGGCCCAGAAGCTGCACTTCCTGCAGCGTGGTGGCCTCAAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS CCA 72 bp ACCTTGGCCACGGTCTCGCTTCCCACCTCTTCGCTCTaGGCCTCGCCGGTCAGATGCCCCTTCTTCGTCCGA +
Preference number: 6 (lower is better)
Translates to: TLATVSLPTSSL*ASPVRCPFFVR
Trigger: TCGGACGAAGAAGGGGCATCTGACCGGCGAGGCCCAGAGCGAAGAGGTGGGAAGCGAGACCGTGGCCAAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000549271.1
CDS CCA 72 bp GGGTGTCCGGCTCCACATCCGAGGTGCATTCCGAGGTaGGGAAGGTGGGCAGGGGTCTTCCAGGTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: GCPAPHPRCIPR*GRWAGVFQVPE
Trigger: TTCTGGGACCTGGAAGACCCCTGCCCACCTTCCCCACCTCGGAATGCACCTCGGATGTGGAGCCGGACACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552375.1
CDS GCA 72 bp AGGCCCCGTAGCTCCAGCGATGCCTCCAGGGTGCTCTaGAGACCACTGTCCTCCTCGTCCACCACACTCTGT +
Preference number: 6 (lower is better)
Translates to: RPRSSSDASRVL*RPLSSSSTTLC
Trigger: ACAGAGTGTGGTGGACGAGGAGGACAGTGGTCTGCAGAGCACCCTGGAGGCATCGCTGGAGCTACGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CCA 72 bp CGCTGGGTCGTCAGCAGCTCAGTGAGGTACTCGGCGTaGTGCTTCGTGGCCACAAACACCACGGTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: RWVVSSSVRYSA*CFVATNTTVWS
Trigger: GGACCAGACCGTGGTGTTTGTGGCCACGAAGCACCACGCCGAGTACCTCACTGAGCTGCTGACGACCCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CCA 72 bp TCCCACTTGAGCTGCTGCCGGCCCCTCGTCAGGTTCTaGGCTTCATCCCCCATCAAGTCCAGGACAGCGCCA +
Preference number: 6 (lower is better)
Translates to: SHLSCCRPLVRF*ASSPIKSRTAP
Trigger: TGGCGCTGTCCTGGACTTGATGGGGGATGAAGCCCAGAACCTGACGAGGGGCCGGCAGCAGCTCAAGTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000546898.1
CDS CCA 72 bp CACCACTTGAGCTGCTGCCGGCCCCTCGTCAGGTTCTaGGCTTCATCCCCCATCAAGTCCAGGACAGCGCCA +
Preference number: 6 (lower is better)
Translates to: HHLSCCRPLVRF*ASSPIKSRTAP
Trigger: TGGCGCTGTCCTGGACTTGATGGGGGATGAAGCCCAGAACCTGACGAGGGGCCGGCAGCAGCTCAAGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548786.1
ENST00000550016.5
CDS GCA 72 bp TGGGTCGTCAGCAGCTCAGTGAGGTACTCGGCGTGGTaGTTCGTGGCCACAAACACCACGGTCTGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: WVVSSSVRYSAW*FVATNTTVWSW
Trigger: CCAGGACCAGACCGTGGTGTTTGTGGCCACGAAGCACCACGCCGAGTACCTCACTGAGCTGCTGACGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CCA 72 bp CCACGTTGTGCAGCAGGTGGAGCAGCACGGCAGCCTTaGTGTCCTCCCGCACGAGGAAGAAGGAGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: PRCAAGGAARQP*CPPARGRRRSS
Trigger: TGAAGACCTCCTTCTTCCTCGTGCGGGAGGACACCAAGGCTGCCGTGCTGCTCCACCTGCTGCACAACGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS CAA 72 bp CCCATGGACTGGAAGCCTCCAGACTTCTTCTTCTTCTaGTTCTGGGCACGCACCATCTCCCGGGTGTCCGGC +
Preference number: 6 (lower is better)
Translates to: PMDWKPPDFFFF*FWARTISRVSG
Trigger: GCCGGACACCCGGGAGATGGTGCGTGCCCAGAACAAGAAGAAGAAGAAGTCTGGAGGCTTCCAGTCCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000552375.1
CDS CCA 72 bp GACTGGAAGCCTCCAGACTTCTTCTTCTTCTTGTTCTaGGCACGCACCATCTCCCGGGTGTCCGGCTCCACA +
Preference number: 6 (lower is better)
Translates to: DWKPPDFFFFLF*ARTISRVSGST
Trigger: TGTGGAGCCGGACACCCGGGAGATGGTGCGTGCCCAGAACAAGAAGAAGAAGAAGTCTGGAGGCTTCCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000552375.1
CDS CAA 72 bp ACGAGGAAGAAGGAGGTCTTCAGCTGCTCGTTGAGCTaGGTATCCACGTCAAGCCGGATGAGCACGGGCTCC +
Preference number: 6 (lower is better)
Translates to: TRKKEVFSCSLS*VSTSSRMSTGS
Trigger: GGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGAGCAGCTGAAGACCTCCTTCTTCCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 72 bp CTTCCCACCTCTTCGCTCTGGGCCTCGCCGGTCAGATaGCCCTTCTTCGTCCGAGTCACGATCATCAATTTT +
Preference number: 6 (lower is better)
Translates to: LPTSSLWASPVR*PFFVRVTIINF
Trigger: AAAATTGATGATCGTGACTCGGACGAAGAAGGGGCATCTGACCGGCGAGGCCCAGAGCGAAGAGGTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306014.10
ENST00000314045.11
ENST00000549271.1
ENST00000551912.1
CDS GCA 72 bp CGTCCGGGCGTGGCAATAATTATGTCGGGATTTTCGTaGAGGGCTGCAAACTGGTCTTCCATCCTAGAGAGG +
Preference number: 6 (lower is better)
Translates to: RPGVAIIMSGFS*RAANWSSILER
Trigger: CCTCTCTAGGATGGAAGACCAGTTTGCAGCCCTGCACGAAAATCCCGACATAATTATTGCCACGCCCGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546869.1
CDS CAA 72 bp GTCACAATGAGAGTGGAGCACTTGCCAAGCGTGAATTaGGCGAGATTGATCTTGCGGGCTGTCGGGTCTAGG +
Preference number: 6 (lower is better)
Translates to: VTMRVEHLPSVN*ARLILRAVGSR
Trigger: CCTAGACCCGACAGCCCGCAAGATCAATCTCGCCAAATTCACGCTTGGCAAGTGCTCCACTCTCATTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306014.10
ENST00000314045.11
CDS GCA 72 bp CGTGGCAATAATTATGTCGGGATTTTCGTGCAGGGCTaGAAACTGGTCTTCCATCCTAGAGAGGAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: RGNNYVGIFVQG*KLVFHPREERR
Trigger: CCTTCTCTCCTCTCTAGGATGGAAGACCAGTTTGCAGCCCTGCACGAAAATCCCGACATAATTATTGCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546869.1
CDS CCA 72 bp ATAATTATGTCGGGATTTTCGTGCAGGGCTGCAAACTaGTCTTCCATCCTAGAGAGGAGAGAAGGGGTTAGC +
Preference number: 6 (lower is better)
Translates to: IIMSGFSCRAAN*SSILERREGVS
Trigger: GCTAACCCCTTCTCTCCTCTCTAGGATGGAAGACCAGTTTGCAGCCCTGCACGAAAATCCCGACATAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546869.1