RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDX52 (Homo sapiens)

Ensembl gene IDs: ENSG00000277594, ENSG00000278053

Ensembl transcript IDs: ENST00000612255.4, ENST00000613633.1, ENST00000614307.4, ENST00000615769.2, ENST00000616646.4, ENST00000617633.5, ENST00000619418.1, ENST00000620209.4, ENST00000622140.1, ENST00000631452.1, ENST00000631762.1, ENST00000632030.1, ENST00000632046.1, ENST00000633356.1, ENST00000633389.1, ENST00000633791.1

Found 852 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAATG +
Preference number: 1 (lower is better)
Translates to: AEARSSRPCSITGMA*IWIGVGIWKPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR GCA 90 bp GTCCAGGTTGAGTTTGCACCACTGTTCAACATCATATGCAAAAGTTaGACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAG +
Preference number: 1 (lower is better)
Translates to: VQVEFAPLFNIICKS*TEHSSSDLVGCAGQ
Trigger: CTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGCATATGATGTTGAACAGTGGTGCAAACTCAACCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR CCA 90 bp ACATCATATGCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTaGGATGTGCAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAAC +
Preference number: 1 (lower is better)
Translates to: TSYAKVALNIALRTL*DVQARKMEASWSLN
Trigger: GTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGCATATGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR CCA 90 bp GTGCTACATGATGATGTTTTGGTCAGCCACAGACAGCAGATACAATaGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATC +
Preference number: 1 (lower is better)
Translates to: VLHDDVLVSHRQQIQ*WDEKWGWKTVRLMI
Trigger: GATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTGTATCTGCTGTCTGTGGCTGACCAAAACATCATCATGTAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR GCA 90 bp GATGACATTGTCCAGGTTGAGTTTGCACCACTGTTCAACATCATATaGAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGT +
Preference number: 1 (lower is better)
Translates to: DDIVQVEFAPLFNII*KSCTEHSSSDLVGC
Trigger: ACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGCATATGATGTTGAACAGTGGTGCAAACTCAACCTGGACAATGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR GCA 90 bp CATCATGGCCTTACATCTAACAGAGCACTTGCCACACTAGTCATGTaGTACATGATGATGTTTTGGTCAGCCACAGACAGCAGATACAAT +
Preference number: 1 (lower is better)
Translates to: HHGLTSNRALATLVM*YMMMFWSATDSRYN
Trigger: ATTGTATCTGCTGTCTGTGGCTGACCAAAACATCATCATGTAGCACATGACTAGTGTGGCAAGTGCTCTGTTAGATGTAAGGCCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR TCA 90 bp TTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGAGTTCACCACATTTTGGTGTTATTT +
Preference number: 1 (lower is better)
Translates to: FQMPLHSIHHTFLHT*REKSLRVHHILVLF
Trigger: AAATAACACCAAAATGTGGTGAACTCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR CCA 90 bp CAGGGAACTGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCCATCAACAAATTAGGAAATATTAAA +
Preference number: 1 (lower is better)
Translates to: QGTGITSHKRGLSLL*FTTQKAINKLGNIK
Trigger: TTTAATATTTCCTAATTTGTTGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCAGTTCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR CCA 90 bp AGAATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGTTTATT +
Preference number: 1 (lower is better)
Translates to: RIDFIFLVKLLKCSN*VRKIGSLDVNFVFI
Trigger: AATAAACACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCCCTGCCTCAGACTCCTaGGTAGCCGGGACTATGCCA +
Preference number: 2 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTPASDS*VAGTMP
Trigger: TGGCATAGTCCCGGCTACTCAGGAGTCTGAGGCAGG...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR GCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCTTCAAGCTATTCTCCTaGCTCAGACTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSFKLFS*LRLLSS
Trigger: GCTACTCAGGAGTCTGAGGCAGGAGAATAGCTTGAA...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR GCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTCCAGGAGTCAGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLPGVRG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCTGACTCCTGG...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR CCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCCCACAAAGTGAGCAGTaGAAGGGGTATTTAATGTCA +
Preference number: 2 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSPQSEQ*KGYLMS
Trigger: TGACATTAAATACCCCTTCCACTGCTCACTTTGTGG...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR CCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCAAAATCCCAGGGAACTaGAATAACCAGCCACAAAAG +
Preference number: 2 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSKIPGN*NNQPQK
Trigger: CTTTTGTGGCTGGTTATTCCAGTTCCCTGGGATTTT...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR CCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGATGAGAAGTGGGGGTaGAAGACAGTGAGACTGATG +
Preference number: 2 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGDEKWG*KTVRLM
Trigger: CATCAGTCTCACTGTCTTCCACCCCCACTTCTCATC...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR TCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTGGCAGGAGAATCACTTaGACCCAGGAGTCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSGRRIT*TQESEV
Trigger: AACCTCTGACTCCTGGGTTCAAGTGATTCTCCTGCC...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR CCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTTTAGGCACAAACCACTaGTCAGGAACTGTACACGCA +
Preference number: 2 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGLGTNH*SGTVHA
Trigger: TGCGTGTACAGTTCCTGACCAGTGGTTTGTGCCTAA...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR TCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGAAGCCAGCTGGTCTCTaGACCCAGTTTTGCCATCTT +
Preference number: 2 (lower is better)
Translates to: AKVALNIALRTLWDVQARKPAGL*TQFCHL
Trigger: AAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTT...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGCCTGCCTCAGACTCCTaGGTAGCCGGGACTATGCCA +
Preference number: 2 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQPASDS*VAGTMP
Trigger: TGGCATAGTCCCGGCTACTCAGGAGTCTGAGGCAGG...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGCTCTGTGAATCTGGCTaGCAAGTTCTCGTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: AKVALNIALRTLWDVQARLCESG*QVLVLV
Trigger: CACCAACACGAGAACTTGCCAGCCAGATTCACAGAG...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTTCGGTAGCTTCATGTTaGCACCTATCACAGACGCTG +
Preference number: 2 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSSVASC*HLSQTL
Trigger: CAGCGTCTGTGATAGGTGCCAACATGAAGCTACCGA...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR GCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCATTGGTTTTTACATTTaGAGGATTCAACTCAGGATG +
Preference number: 2 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSIGFYI*RIQLRM
Trigger: CATCCTGAGTTGAATCCTGCAAATGTAAAAACCAAT...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR GCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTACTCTTGTTTGGTTCTaGCATCCTGCCACCTTACAG +
Preference number: 2 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLTLVWF*HPATLQ
Trigger: CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGT...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp CAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGG +
Preference number: 2 (lower is better)
Translates to: QARKMEASWSLNPVLPSSGMACI*IGVGIW
Trigger: CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC...TGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTGCTCTTCGGACCTTGTaGGATGTGCAGGCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLALRTL*DVQARK
Trigger: TTTCCTGGCCTGCACATCCCACAAGGTCCGAAGAGC...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLGLSLL*FTTQKA
Trigger: GGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCC...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSGLSLL*FTTQKA
Trigger: GGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCC...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCCTTAGGAGTTACAATTaGCATCTTACAGATGAGAAA +
Preference number: 2 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSLRSYN*HLTDEK
Trigger: TTTCTCATCTGTAAGATGCCAATTGTAACTCCTAAG...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR TCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGATCTACTTATTAAATaGGGCACCATCAACCTAAGG +
Preference number: 2 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGDLLIK*GTINLR
Trigger: CCTTAGGTTGATGGTGCCTCATTTAATAAGTAGATC...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR GCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTTGGTAGACAGCTCATaGTACCATCCACAAAGTGAG +
Preference number: 2 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLLVDSS*YHPQSE
Trigger: CTCACTTTGTGGATGGTAGCATGAGCTGTCTACCAA...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR GCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGGGGGTTTTGCCATGTTaGCCGGGCTGGTCTCTAAAC +
Preference number: 2 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQGVLPC*PGWSLN
Trigger: GTTTAGAGACCAGCCCGGGCAACATGGCAAAACCCC...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 2 (lower is better)
Translates to: AKVALNIALRTLWDVQARLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGTTTTCCAGATCCAGTTaGAGCAGAAGCCAGAAGTTC +
Preference number: 2 (lower is better)
Translates to: AKVALNIALRTLWDVQARFSRSS*SRSQKF
Trigger: GAACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAA...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGA +
Preference number: 2 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLTFLHT*REKSLR
Trigger: TCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGT...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR TCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTCCAGTCTTACGTATATaGAGTCACTTTTTCATTCCA +
Preference number: 2 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGPVLRI*SHFFIP
Trigger: TGGAATGAAAAAGTGACTTCATATACGTAAGACTGG...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR CCA 90 bp CAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCACTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 2 (lower is better)
Translates to: QARKMEASWSLNPVLPSSLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...TGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGATTGGCGTAGGCATTTaGAAACCTGCATCTAGAATG +
Preference number: 2 (lower is better)
Translates to: AKVALNIALRTLWDVQARIGVGI*KPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAAT...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAAGGCTTGCATTTGGATTaGCGTAGGCATTTGGAAACC +
Preference number: 2 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKGLHLD*RRHLET
Trigger: GGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCC...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR CAA 90 bp GTGCAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTaGCCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCAC +
Preference number: 2 (lower is better)
Translates to: VQARKMEASWSLNPV*PSSNSLSDSSTTSH
Trigger: GTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp AGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCTTTGCTTCTACAGATaGCATCCACTGTATAGTAGC +
Preference number: 2 (lower is better)
Translates to: SQKFPTMQHNWDGLHLDWLCFYR*HPLYSS
Trigger: GCTACTATACAGTGGATGTCATCTGTAGAAGCAAAG...CCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAATCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCA +
Preference number: 2 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKSWSSC*NVAIGS
Trigger: TGACCCAATTGCTACATTTCAGCAACTTGACCAGGA...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCACTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTT +
Preference number: 2 (lower is better)
Translates to: PATKEASLCCGSQHKRPSLPSTK*AVEGVF
Trigger: AAATACCCCTTCCACTGCTCACTTTGTGGATGGTAG...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp TGCTCCAATGGACACACTGATGACATTGTCCAGGTTGAGTTTGCACCACTGTTCTTTCTTGGCTGCCACTaGTGCTTTGTGGATCATGTG +
Preference number: 2 (lower is better)
Translates to: CSNGHTDDIVQVEFAPLFFLGCH*CFVDHV
Trigger: CACATGATCCACAAAGCAGCAGTGGCAGCCAAGAAA...GAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGCTCTGTGAATCTGGCTaGCAAGTTCTCGTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRLCESG*QVLVLV
Trigger: CACCAACACGAGAACTTGCCAGCCAGATTCACAGAG...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTAGCTCTTCGGACCTTGTaGGATGTGCAGGCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: VVSENLLCILVQDTQPAVALRTL*DVQARK
Trigger: TTTCCTGGCCTGCACATCCCACAAGGTCCGAAGAGC...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCATGAGCCACTACGCCTaGCCAAGAAAAATATTTTCA +
Preference number: 2 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTMSHYA*PRKIFS
Trigger: TGAAAATATTTTTCTTGGCCAGGCGTAGTGGCTCAT...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR CCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTATGAGCCACTACGCCTaGCCAAGAAAAATATTTTCA +
Preference number: 2 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSMSHYA*PRKIFS
Trigger: TGAAAATATTTTTCTTGGCCAGGCGTAGTGGCTCAT...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR TCA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAACTTTGCTTCTACAGATaGCATCCACTGTATAGTAGC +
Preference number: 2 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKLCFYR*HPLYSS
Trigger: GCTACTATACAGTGGATGTCATCTGTAGAAGCAAAG...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAAAAGTTCTCGTGTTGGTaGTATAATCAGGGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKKFSCW*YNQGSE
Trigger: TTCAGAGCCCTGATTATATCACCAACACGAGAACTT...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGAAGCCAGCTGGTCTCTaGACCCAGTTTTGCCATCTT +
Preference number: 2 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVKPAGL*TQFCHL
Trigger: AAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTT...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTCCAGTCTTACGTATATaGAGTCACTTTTTCATTCCA +
Preference number: 2 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSPVLRI*SHFFIP
Trigger: TGGAATGAAAAAGTGACTTCATATACGTAAGACTGG...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR GCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTTTGGTAGACAGCTCATaGTACCATCCACAAAGTGAG +
Preference number: 2 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLLVDSS*YHPQSE
Trigger: CTCACTTTGTGGATGGTAGCATGAGCTGTCTACCAA...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCATTGGTAGACAGCTCATaGTACCATCCACAAAGTGAG +
Preference number: 2 (lower is better)
Translates to: PATKEASLCCGSQHKRPSLVDSS*YHPQSE
Trigger: CTCACTTTGTGGATGGTAGCATGAGCTGTCTACCAA...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQGLSLL*FTTQKA
Trigger: GGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCC...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRGLSLL*FTTQKA
Trigger: GGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCC...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCAAAGTCACACAGCTaGCAAATGGGTTGCACCAGT +
Preference number: 2 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQSKSHS*QMGCTS
Trigger: ACTGGTGCAACCCATTTGCCAGCTGTGTGACTTTGA...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR TCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACACTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTT +
Preference number: 2 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTLPSTK*AVEGVF
Trigger: AAATACCCCTTCCACTGCTCACTTTGTGGATGGTAG...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR TCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGCTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTT +
Preference number: 2 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILLPSTK*AVEGVF
Trigger: AAATACCCCTTCCACTGCTCACTTTGTGGATGGTAG...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR GCA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGTCCAAATTTCTTGGCTaGCACTGCTGCTTTGTGGAT +
Preference number: 2 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRSKFLG*HCCFVD
Trigger: ATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGA...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACGGACCTTGTGGGATGTaGAGGCCAGGAAAATGGAAG +
Preference number: 2 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNGPCGM*RPGKWK
Trigger: CTTCCATTTTCCTGGCCTGCACATCCCACAAGGTCC...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp GAGAAAATCAAGGTTAGAAACAGCTACTGTCATTTGTCCAGATCATACAGCTACGGGGTTTTGCCATGTTaGCCGGGCTGGTCTCTAAAC +
Preference number: 2 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYGVLPC*PGWSLN
Trigger: GTTTAGAGACCAGCCCGGGCAACATGGCAAAACCCC...GTAGCTGTATGATCTGGACAAATGACAGTAGCTGTTTCTAACCTTGATTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615769.2
3UTR-3UTR CCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTACTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 2 (lower is better)
Translates to: IWLASSRVGDIIRALKPLLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTAACCATGCAGCATAACTaGGATGGCTTGCATTTGGAT +
Preference number: 2 (lower is better)
Translates to: IWLASSRVGDIIRALKPLTMQHN*DGLHLD
Trigger: ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGT...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPGLSLL*FTTQKA
Trigger: GGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCC...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCCTCCAGAATATATATTaGGTAAAGGATCTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTLQNIY*VKDLFA
Trigger: TGCAAACAGATCCTTTACCCAATATATATTCTGGAG...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR CCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTCTCCAGAATATATATTaGGTAAAGGATCTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLLQNIY*VKDLFA
Trigger: TGCAAACAGATCCTTTACCCAATATATATTCTGGAG...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp TTAACTTTTGTCTTCAAGAGCTACTTTCTTCTTGCTGTTCTGACCAGTGACCTTTTGGGAAGCAATTTCTaGCTGGGCGTGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: LTFVFKSYFLLAVLTSDLLGSNF*LGVVAH
Trigger: GTGAGCCACCACGCCCAGCCAGAAATTGCTTCCCAA...AAGGTCACTGGTCAGAACAGCAAGAAGAAAGTAGCTCTTGAAGACAAAAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR CAA 90 bp GCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGTaGAGTTTGCACCACTGTTCAACATCATATGCAAAAGTTGCACTG +
Preference number: 2 (lower is better)
Translates to: AEFLAPMDTLMTLSR*SLHHCSTSYAKVAL
Trigger: CAGTGCAACTTTTGCATATGATGTTGAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTCTTTGCTTCTACAGATaGCATCCACTGTATAGTAGC +
Preference number: 2 (lower is better)
Translates to: ITGMACIWIGVGIWKPASLCFYR*HPLYSS
Trigger: GCTACTATACAGTGGATGTCATCTGTAGAAGCAAAG...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCA +
Preference number: 2 (lower is better)
Translates to: SIPLASKAVQIRTQIFPASWSSC*NVAIGS
Trigger: TGACCCAATTGCTACATTTCAGCAACTTGACCAGGA...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp AGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATGCATCTAGAATGTTCTaGAGTAGTCGAGAATTGATT +
Preference number: 2 (lower is better)
Translates to: RSQKFPTMQHNWDGLHLDASRMF*SSRELI
Trigger: AATCAATTCTCGACTACTTCAGAACATTCTAGATGC...ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAGTCAAGGCTTTATTTTaGATTTCTGTTCCAGATGCC +
Preference number: 2 (lower is better)
Translates to: PATKEASLCCGSQHKRPSVKALF*ISVPDA
Trigger: GGCATCTGGAACAGAAATTCAAAATAAAGCCTTGAC...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTACTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTT +
Preference number: 2 (lower is better)
Translates to: VVSENLLCILVQDTQPAVLPSTK*AVEGVF
Trigger: AAATACCCCTTCCACTGCTCACTTTGTGGATGGTAG...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR TCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAGATCTACTTATTAAATaGGGCACCATCAACCTAAGG +
Preference number: 2 (lower is better)
Translates to: PATKEASLCCGSQHKRPSDLLIK*GTINLR
Trigger: CCTTAGGTTGATGGTGCCTCATTTAATAAGTAGATC...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTAGGCTTGCATTTGGATTaGCGTAGGCATTTGGAAACC +
Preference number: 2 (lower is better)
Translates to: VVSENLLCILVQDTQPAVGLHLD*RRHLET
Trigger: GGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCC...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGCCACAAAGTGAGCAGTaGAAGGGGTATTTAATGTCA +
Preference number: 2 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQPQSEQ*KGYLMS
Trigger: TGACATTAAATACCCCTTCCACTGCTCACTTTGTGG...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTATGAGCCACTACGCCTaGCCAAGAAAAATATTTTCA +
Preference number: 2 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLMSHYA*PRKIFS
Trigger: TGAAAATATTTTTCTTGGCCAGGCGTAGTGGCTCAT...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR CAA 90 bp GTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTaGAAGGGAAAAGTCCTTAAGAGTTCACCACATTTTGGTGTTATT +
Preference number: 2 (lower is better)
Translates to: VPDASPQHSSHLPSH*KGKVLKSSPHFGVI
Trigger: AATAACACCAAAATGTGGTGAACTCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGA +
Preference number: 2 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPTFLHT*REKSLR
Trigger: TCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGT...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR TCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGA +
Preference number: 2 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTTFLHT*REKSLR
Trigger: TCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGT...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR GCA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGC +
Preference number: 2 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLAITGMA*IWIGVG
Trigger: GCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCACTTGGCTGCCACTGCTaGTTTGTGGATCATGTGTAT +
Preference number: 2 (lower is better)
Translates to: KPFMYSGTGHPACCITLALGCHC*FVDHVY
Trigger: ATACACATGATCCACAAAGCAGCAGTGGCAGCCAAG...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAAATTTCTGTTCCAGATaGCTCTCCACAGCATTCATC +
Preference number: 2 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTNFCSR*LSTAFI
Trigger: GATGAATGCTGTGGAGAGGCATCTGGAACAGAAATT...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp GGTCTCAGATCCAACAAAGAGAAGCTCTTGTTCTACAGTTTCTACTGCAGAATTGGCTTGCATTTGGATTaGCGTAGGCATTTGGAAACC +
Preference number: 2 (lower is better)
Translates to: GLRSNKEKLLFYSFYCRIGLHLD*RRHLET
Trigger: GGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCC...AATTCTGCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTTGGATCTGAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCTCTCTGGTTAACAGAATAGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGG +
Preference number: 2 (lower is better)
Translates to: DFSCSETVDCVISLVNRIGMACI*IGVGIW
Trigger: CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC...TATTCTGTTAACCAGAGAGATAACACAGTCCACAGTTTCAGAGCAGGAAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
3UTR-3UTR CCA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACCCTGCTCTGAAACTGTaGACTGTGTTATCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNPALKL*TVLSLW
Trigger: CCAGAGAGATAACACAGTCCACAGTTTCAGAGCAGG...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
3UTR-3UTR CCA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCC +
Preference number: 2 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLAGLSLL*FTTQKA
Trigger: GGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCC...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGAAAATCCCAGGGAACTaGAATAACCAGCCACAAAAG +
Preference number: 2 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILKIPGN*NNQPQK
Trigger: CTTTTGTGGCTGGTTATTCCAGTTCCCTGGGATTTT...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR CAA 90 bp TTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGTTGAGTTaGCACCACTGTTCAACATCATATGCAAAAGTTGCACTGAACATA +
Preference number: 2 (lower is better)
Translates to: FLAPMDTLMTLSRLS*HHCSTSYAKVALNI
Trigger: TATGTTCAGTGCAACTTTTGCATATGATGTTGAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR CAA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATaGTCCAGGTTGAGTTTGCACCACTGTTCAACATCATATGCAAAA +
Preference number: 2 (lower is better)
Translates to: VSTAEFLAPMDTLMT*SRLSLHHCSTSYAK
Trigger: TTTTGCATATGATGTTGAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR CAA 90 bp TCCCAGGGAACTGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTaGTGGTTCACAACACAAAAGGCCATCAACAAATTAGGAAATATT +
Preference number: 2 (lower is better)
Translates to: SQGTGITSHKRGLSL*WFTTQKAINKLGNI
Trigger: AATATTTCCTAATTTGTTGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCAGTTCCCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR CAA 90 bp AAATCCCAGGGAACTGGAATAACCAGCCACAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAAAAGGCCATCAACAAATTAGGAAAT +
Preference number: 2 (lower is better)
Translates to: KSQGTGITSHKRGLS*LWFTTQKAINKLGN
Trigger: ATTTCCTAATTTGTTGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCAGTTCCCTGGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTAGCATCTAGAATGTTCTaGAGTAGTCGAGAATTGATT +
Preference number: 2 (lower is better)
Translates to: IWLASSRVGDIIRALKPLASRMF*SSRELI
Trigger: AATCAATTCTCGACTACTTCAGAACATTCTAGATGC...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGGTCAAGGCTTTATTTTaGATTTCTGTTCCAGATGCC +
Preference number: 2 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILVKALF*ISVPDA
Trigger: GGCATCTGGAACAGAAATTCAAAATAAAGCCTTGAC...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR TCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGATCTACTTATTAAATaGGGCACCATCAACCTAAGG +
Preference number: 2 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTDLLIK*GTINLR
Trigger: CCTTAGGTTGATGGTGCCTCATTTAATAAGTAGATC...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR TCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGGATCTACTTATTAAATaGGGCACCATCAACCTAAGG +
Preference number: 2 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVDLLIK*GTINLR
Trigger: CCTTAGGTTGATGGTGCCTCATTTAATAAGTAGATC...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR GCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGGCGGGTTGTTTCAGCTaGATTAAAATAGGAATGCTA +
Preference number: 2 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVAGCFS*IKIGML
Trigger: TAGCATTCCTATTTTAATGCAGCTGAAACAACCCGC...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCTCCAAATTTCTTGGCTaGCACTGCTGCTTTGTGGAT +
Preference number: 2 (lower is better)
Translates to: CTNQNPDFSCSETVDCVISKFLG*HCCFVD
Trigger: ATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGA...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAGGACCTTGTGGGATGTaGAGGCCAGGAAAATGGAAG +
Preference number: 2 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEGPCGM*RPGKWK
Trigger: CTTCCATTTTCCTGGCCTGCACATCCCACAAGGTCC...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR GCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAAGTGAAAAATGTAATTaGTTTTCCCTTATTCCCTGC +
Preference number: 2 (lower is better)
Translates to: PATKEASLCCGSQHKRPSSEKCN*FSLIPC
Trigger: GCAGGGAATAAGGGAAAAGCAATTACATTTTTCACT...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CCA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACTTTTCCAGATCCAGTTaGAGCAGAAGCCAGAAGTTC +
Preference number: 2 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNFSRSS*SRSQKF
Trigger: GAACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAA...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCAAAAATGGAAGCCAGCTaGTCTCTGAACCCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: KPFMYSGTGHPACCITLAKMEAS*SLNPVL
Trigger: CAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTT...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAAAAATCCCAGGGAACTaGAATAACCAGCCACAAAAG +
Preference number: 2 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLKIPGN*NNQPQK
Trigger: CTTTTGTGGCTGGTTATTCCAGTTCCCTGGGATTTT...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACCCTGCTCTGAAACTGTaGACTGTGTTATCTCTCTGT +
Preference number: 2 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNPALKL*TVLSLC
Trigger: ACAGAGAGATAACACAGTCCACAGTTTCAGAGCAGG...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR CAA 90 bp AGATGTGACCTCAGTTTGTCCTGGAATCCTTTTTGTTCCTCTTCTTaGCCTATTGGTTTTTACATTTGCAGGATTCAACTCAGGATGTCG +
Preference number: 2 (lower is better)
Translates to: RCDLSLSWNPFCSSS*PIGFYICRIQLRMS
Trigger: CGACATCCTGAGTTGAATCCTGCAAATGTAAAAACCAATAGGCAAAGAAGAGGAACAAAAAGGATTCCAGGACAAACTGAGGTCACATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR TCA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTTTCAAACAGTTTATCTaGTTCGTCTACTACAAGCCA +
Preference number: 2 (lower is better)
Translates to: SIPLASKAVQIRTQIFPAFKQFI*FVYYKP
Trigger: TGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAA...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCAACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGA +
Preference number: 2 (lower is better)
Translates to: KPFMYSGTGHPACCITLATFLHT*REKSLR
Trigger: TCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGT...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR TCA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTAGATCTACTTATTAAATaGGGCACCATCAACCTAAGG +
Preference number: 2 (lower is better)
Translates to: VVSENLLCILVQDTQPAVDLLIK*GTINLR
Trigger: CCTTAGGTTGATGGTGCCTCATTTAATAAGTAGATC...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR TCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGCCAGTCTTACGTATATaGAGTCACTTTTTCATTCCA +
Preference number: 2 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVPVLRI*SHFFIP
Trigger: TGGAATGAAAAAGTGACTTCATATACGTAAGACTGG...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR GCA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCTCTGAAGCCTTTATTTaGGGGTTGTTTCAGCTGCAT +
Preference number: 2 (lower is better)
Translates to: CTNQNPDFSCSETVDCVISEAFI*GLFQLH
Trigger: ATGCAGCTGAAACAACCCGCAAATAAAGGCTTCAGA...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp TTAACTTTTGTCTTCAAGAGCTACTTTCTTCTTGCTGTTCTGACCAGTGACCTTTCCAAATTTCTTGGCTaGCACTGCTGCTTTGTGGAT +
Preference number: 2 (lower is better)
Translates to: LTFVFKSYFLLAVLTSDLSKFLG*HCCFVD
Trigger: ATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGA...AAGGTCACTGGTCAGAACAGCAAGAAGAAAGTAGCTCTTGAAGACAAAAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CCA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTGGCGTAGGCATTTaGAAACCTGCATCTAGAATG +
Preference number: 2 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNIGVGI*KPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAAT...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCTCTCTGGTTAACAGAATAAAAATGGAAGCCAGCTaGTCTCTGAACCCAGTTTTG +
Preference number: 2 (lower is better)
Translates to: DFSCSETVDCVISLVNRIKMEAS*SLNPVL
Trigger: CAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTT...TATTCTGTTAACCAGAGAGATAACACAGTCCACAGTTTCAGAGCAGGAAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
3UTR CAA 90 bp GTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTaGGACGTGAATTTTGTGTTTATTCCGCAAGAAGTTTATCTTTTC +
Preference number: 2 (lower is better)
Translates to: VKLLKCSNWVRKIGS*DVNFVFIPQEVYLF
Trigger: GAAAAGATAAACTTCTTGCGGAATAAACACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACTTTATTAACTCTCTGTaGATCTGGCTGGCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNFINSL*IWLASS
Trigger: AGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAA...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCAAGATTTTTCCTGCTCTaGAACTGTGGACTGTGTTAT +
Preference number: 2 (lower is better)
Translates to: KPFMYSGTGHPACCITLARFFLL*NCGLCY
Trigger: ATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCT...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGC +
Preference number: 2 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEITGMA*IWIGVG
Trigger: GCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR GCA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCGCGGGTTGTTTCAGCTaGATTAAAATAGGAATGCTA +
Preference number: 2 (lower is better)
Translates to: CTNQNPDFSCSETVDCVIAGCFS*IKIGML
Trigger: TAGCATTCCTATTTTAATGCAGCTGAAACAACCCGC...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGTTCAACATCATATaGAAAAGTTGCACTGAACAT +
Preference number: 2 (lower is better)
Translates to: SIPLASKAVQIRTQIFPALFNII*KSCTEH
Trigger: ATGTTCAGTGCAACTTTTGCATATGATGTTGAACAG...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGTTGGTAGACAGCTCATaGTACCATCCACAAAGTGAG +
Preference number: 2 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKLVDSS*YHPQSE
Trigger: CTCACTTTGTGGATGGTAGCATGAGCTGTCTACCAA...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GAGAAAATCAAGGTTAGAAACAGCTACTGTCATTTGTCCAGATCATACAGCTACCCACAAAGTGAGCAGTaGAAGGGGTATTTAATGTCA +
Preference number: 2 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYPQSEQ*KGYLMS
Trigger: TGACATTAAATACCCCTTCCACTGCTCACTTTGTGG...GTAGCTGTATGATCTGGACAAATGACAGTAGCTGTTTCTAACCTTGATTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615769.2
3UTR-3UTR TCA 90 bp TTAACTTTTGTCTTCAAGAGCTACTTTCTTCTTGCTGTTCTGACCAGTGACCTTTTTATTAACTCTCTGTaGATCTGGCTGGCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: LTFVFKSYFLLAVLTSDLFINSL*IWLASS
Trigger: AGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAA...AAGGTCACTGGTCAGAACAGCAAGAAGAAAGTAGCTCTTGAAGACAAAAGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR TCA 90 bp GAGAAAATCAAGGTTAGAAACAGCTACTGTCATTTGTCCAGATCATACAGCTACGTCAAGGCTTTATTTTaGATTTCTGTTCCAGATGCC +
Preference number: 2 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYVKALF*ISVPDA
Trigger: GGCATCTGGAACAGAAATTCAAAATAAAGCCTTGAC...GTAGCTGTATGATCTGGACAAATGACAGTAGCTGTTTCTAACCTTGATTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615769.2
3UTR-3UTR GCA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATCATATGCAAAAGTTaGACTGAACATAGCTCTTCG +
Preference number: 2 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNIICKS*TEHSSS
Trigger: CGAAGAGCTATGTTCAGTGCAACTTTTGCATATGAT...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGAATTTCTGTTCCAGATaGCTCTCCACAGCATTCATC +
Preference number: 2 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKNFCSR*LSTAFI
Trigger: GATGAATGCTGTGGAGAGGCATCTGGAACAGAAATT...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTTTGGTAGACAGCTCATaGTACCATCCACAAAGTGAG +
Preference number: 2 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSLVDSS*YHPQSE
Trigger: CTCACTTTGTGGATGGTAGCATGAGCTGTCTACCAA...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CCA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGACCATGCAGCATAACTaGGATGGCTTGCATTTGGAT +
Preference number: 2 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKTMQHN*DGLHLD
Trigger: ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGT...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGA +
Preference number: 2 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHETFLHT*REKSLR
Trigger: TCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGT...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR GCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCATTGTTGTGTTCTCTCTaGATGAATAACATCCACATT +
Preference number: 2 (lower is better)
Translates to: KPFMYSGTGHPACCITLALLCSL*MNNIHI
Trigger: AATGTGGATGTTATTCATGCAGAGAGAACACAACAA...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAACCACAAAGTGAGCAGTaGAAGGGGTATTTAATGTCA +
Preference number: 2 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEPQSEQ*KGYLMS
Trigger: TGACATTAAATACCCCTTCCACTGCTCACTTTGTGG...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAAAAATCCCAGGGAACTaGAATAACCAGCCACAAAAG +
Preference number: 2 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEKIPGN*NNQPQK
Trigger: CTTTTGTGGCTGGTTATTCCAGTTCCCTGGGATTTT...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR TCA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGGTCAAGGCTTTATTTTaGATTTCTGTTCCAGATGCC +
Preference number: 2 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLVKALF*ISVPDA
Trigger: GGCATCTGGAACAGAAATTCAAAATAAAGCCTTGAC...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR GCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGATCATATGCAAAAGTTaGACTGAACATAGCTCTTCG +
Preference number: 2 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKIICKS*TEHSSS
Trigger: CGAAGAGCTATGTTCAGTGCAACTTTTGCATATGAT...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR TCA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGTTCAAACAGTTTATCTaGTTCGTCTACTACAAGCCA +
Preference number: 2 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKFKQFI*FVYYKP
Trigger: TGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAA...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCCAGCTGGCAAATGGGTaGCACCAGTATACCTACCTC +
Preference number: 3 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSQLANG*HQYTYL
Trigger: GAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTG...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR GCA 72 bp CTGCAACCTCCGCCTCACAGGTTCAAGCTATTCTCCTaGCTCAGACTCCTGAGTAGCCGGGACTATGCCACC +
Preference number: 3 (lower is better)
Translates to: LQPPPHRFKLFS*LRLLSSRDYAT
Trigger: GGTGGCATAGTCCCGGCTACTCAGGAGTCTGAGGCAGGAGAATAGCTTGAACCTGTGAGGCGGAGGTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAACAAGCCACTCAACACTaGCTAGGTCGATTCCGGGGG +
Preference number: 3 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKQATQH*LGRFRG
Trigger: CCCCCGGAATCGACCTAGCAAGTGTTGAGTGGCTTG...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTGCTAAGGCAGGAGGATaGTGTGAGGTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLAKAGG*CEVRSS
Trigger: TGAACTCCTGACCTCACACAATCCTCCTGCCTTAGC...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCCCTCTTCTTTGCCTATaGGTTTTTACATTTGCAGGA +
Preference number: 3 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSPLLCL*VFTFAG
Trigger: TCCTGCAAATGTAAAAACCAATAGGCAAAGAAGAGG...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR CAA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTCTCGGTAGCTTCATGTaGGCACCTATCACAGACGCT +
Preference number: 3 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLLGSFM*APITDA
Trigger: AGCGTCTGTGATAGGTGCCAACATGAAGCTACCGAG...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTCTCGGTAGCTTCATGTaGGCACCTATCACAGACGCT +
Preference number: 3 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSLGSFM*APITDA
Trigger: AGCGTCTGTGATAGGTGCCAACATGAAGCTACCGAG...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp AAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGGCTAAGGCAGGAGGATaGTGTGAGGTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: KFPTMQHNWDGLHLDWRRAKAGG*CEVRSS
Trigger: TGAACTCCTGACCTCACACAATCCTCCTGCCTTAGC...CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CAA 90 bp CAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCATGGGATGGCTTGCATTaGGATTGGCGTAGGCATTTG +
Preference number: 3 (lower is better)
Translates to: QARKMEASWSLNPVLPSSWDGLH*DWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCA...TGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR CCA 72 bp AGCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTaGGATGGCTTGCATTTGGATTGGCGTAGGCATTTG +
Preference number: 3 (lower is better)
Translates to: SRSQKFPTMQHN*DGLHLDWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTATAGCTCTTCGGACCTaGTGGGATGTGCAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SIPLASKAVQIRTQIFPAIALRT*WDVQAR
Trigger: CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTAT...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTCACCTTCCTTCACACTaGAAGGGAAAAGTCCTTAAG +
Preference number: 3 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLHLPSH*KGKVLK
Trigger: CTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTG...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCACAGCTGGCAAATGGGTaGCACCAGTATACCTACCTC +
Preference number: 3 (lower is better)
Translates to: PATKEASLCCGSQHKRPSQLANG*HQYTYL
Trigger: GAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTG...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR GCA 72 bp AGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGCATTTGGAAACCTGCA +
Preference number: 3 (lower is better)
Translates to: RSSRPCSITGMA*IWIGVGIWKPA
Trigger: TGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR CCA 72 bp TCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGGAAACCTGCATCTAGA +
Preference number: 3 (lower is better)
Translates to: SRPCSITGMACI*IGVGIWKPASR
Trigger: TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR CCA 72 bp GATGATGTTTTGGTCAGCCACAGACAGCAGATACAATaGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGA +
Preference number: 3 (lower is better)
Translates to: DDVLVSHRQQIQ*WDEKWGWKTVR
Trigger: TCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTGTATCTGCTGTCTGTGGCTGACCAAAACATCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR CAA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 3 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR-3UTR CAA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGAGTAGCACCTTCTTCTaGGGAAGCAATTTCGTTTTA +
Preference number: 3 (lower is better)
Translates to: AKVALNIALRTLWDVQARSSTFF*GSNFVL
Trigger: TAAAACGAAATTGCTTCCCAAGAAGAAGGTGCTACT...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
3UTR-3UTR CAA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAGGAAGATCGGTTCCTaGGACGTGAATTTTGTGTTT +
Preference number: 3 (lower is better)
Translates to: RPCSITGMACIWIGVGIWRKIGS*DVNFVF
Trigger: AAACACAAAATTCACGTCCAAGGAACCGATCTTCCT...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCATAGCTCTTCGGACCTaGTGGGATGTGCAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: CTNQNPDFSCSETVDCVIIALRT*WDVQAR
Trigger: CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTAT...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTGCTAAGGCAGGAGGATaGTGTGAGGTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPAKAGG*CEVRSS
Trigger: TGAACTCCTGACCTCACACAATCCTCCTGCCTTAGC...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTCCTCCAGAATATATATaGGGTAAAGGATCTGTTTGC +
Preference number: 3 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSPPEYI*GKGSVC
Trigger: GCAAACAGATCCTTTACCCAATATATATTCTGGAGG...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTCCTCCAGAATATATATaGGGTAAAGGATCTGTTTGC +
Preference number: 3 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLPPEYI*GKGSVC
Trigger: GCAAACAGATCCTTTACCCAATATATATTCTGGAGG...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACACAGCTGGCAAATGGGTaGCACCAGTATACCTACCTC +
Preference number: 3 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTQLANG*HQYTYL
Trigger: GAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTG...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAGTAGCACCTTCTTCTaGGGAAGCAATTTCGTTTTA +
Preference number: 3 (lower is better)
Translates to: RPCSITGMACIWIGVGIWSSTFF*GSNFVL
Trigger: TAAAACGAAATTGCTTCCCAAGAAGAAGGTGCTACT...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
3UTR-3UTR CAA 90 bp TCCAGATCCAGTTGGAGCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGTTTTGTCTTCAATCTTaGCTTCTACAGATGACATCC +
Preference number: 3 (lower is better)
Translates to: SRSSWSRSQKFPTMQHNWFCLQS*LLQMTS
Trigger: GGATGTCATCTGTAGAAGCAAAGATTGAAGACAAAA...CCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCTCCAACTGGATCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCATAACTGGGATGGCTaGCATTTGGATTGGCGTAGG +
Preference number: 3 (lower is better)
Translates to: SIPLASKAVQIRTQIFPAHNWDG*HLDWRR
Trigger: CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGCTAAGGCAGGAGGATaGTGTGAGGTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKAKAGG*CEVRSS
Trigger: TGAACTCCTGACCTCACACAATCCTCCTGCCTTAGC...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCACACCTTCCTTCACACTaGAAGGGAAAAGTCCTTAAG +
Preference number: 3 (lower is better)
Translates to: PATKEASLCCGSQHKRPSHLPSH*KGKVLK
Trigger: CTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTG...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAAAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAA +
Preference number: 3 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKKRGLS*LWFTTQ
Trigger: TTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTT...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CAA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTTCTACAGCTGTACATTaGCATTTTAGGCTAAGTGTT +
Preference number: 3 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSSTAVH*HFRLSV
Trigger: AACACTTAGCCTAAAATGCAAATGTACAGCTGTAGA...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR TCA 72 bp ATGTGCAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTaGACCCAGTTTTGCCATCTTCAAACAGTTTATCTG +
Preference number: 3 (lower is better)
Translates to: MCRPGKWKPAGL*TQFCHLQTVYL
Trigger: CAGATAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATGGGATGGCTTGCATTaGGATTGGCGTAGGCATTTG +
Preference number: 3 (lower is better)
Translates to: VVSENLLCILVQDTQPAVWDGLH*DWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCA...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTTTCCAGATCCAGTaGGAGCAGAAGCCAGAAGTT +
Preference number: 3 (lower is better)
Translates to: IWLASSRVGDIIRALKPLFFQIQ*EQKPEV
Trigger: AACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAA...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGGACACACTGATGACATaGTCCAGGTTGAGTTTGCAC +
Preference number: 3 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVDTLMT*SRLSLH
Trigger: GTGCAAACTCAACCTGGACAATGTCATCAGTGTGTC...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGCACCTTCCTTCACACTaGAAGGGAAAAGTCCTTAAG +
Preference number: 3 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQHLPSH*KGKVLK
Trigger: CTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTG...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAA +
Preference number: 3 (lower is better)
Translates to: PATKEASLCCGSQHKRPSKRGLS*LWFTTQ
Trigger: TTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTT...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR GCA 72 bp CTTACATCTAACAGAGCACTTGCCACACTAGTCATGTaGTACATGATGATGTTTTGGTCAGCCACAGACAGC +
Preference number: 3 (lower is better)
Translates to: LTSNRALATLVM*YMMMFWSATDS
Trigger: GCTGTCTGTGGCTGACCAAAACATCATCATGTAGCACATGACTAGTGTGGCAAGTGCTCTGTTAGATGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR CCA 72 bp TCTCCCCTCTTTCTCTGGAACTCGGTAGCTTCATGTTaGCACCTATCACAGACGCTGAAGGCATTTAAATTT +
Preference number: 3 (lower is better)
Translates to: SPLFLWNSVASC*HLSQTLKAFKF
Trigger: AAATTTAAATGCCTTCAGCGTCTGTGATAGGTGCCAACATGAAGCTACCGAGTTCCAGAGAAAGAGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACCATAACTGGGATGGCTaGCATTTGGATTGGCGTAGG +
Preference number: 3 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNHNWDG*HLDWRR
Trigger: CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR TCA 72 bp CCTCTCCACAGCATTCATCACACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGAGTTCACCACATTTTG +
Preference number: 3 (lower is better)
Translates to: PLHSIHHTFLHT*REKSLRVHHIL
Trigger: CAAAATGTGGTGAACTCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR TCA 72 bp CTTCTTGGTAGACAGCTCATGCTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTTAATGTCAAGGCTTTA +
Preference number: 3 (lower is better)
Translates to: LLGRQLMLPSTK*AVEGVFNVKAL
Trigger: TAAAGCCTTGACATTAAATACCCCTTCCACTGCTCACTTTGTGGATGGTAGCATGAGCTGTCTACCAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR GCA 72 bp GAGTTTGCACCACTGTTCAACATCATATGCAAAAGTTaGACTGAACATAGCTCTTCGGACCTTGTGGGATGT +
Preference number: 3 (lower is better)
Translates to: EFAPLFNIICKS*TEHSSSDLVGC
Trigger: ACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGCATATGATGTTGAACAGTGGTGCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR GCA 72 bp GTCCAGGTTGAGTTTGCACCACTGTTCAACATCATATaGAAAAGTTGCACTGAACATAGCTCTTCGGACCTT +
Preference number: 3 (lower is better)
Translates to: VQVEFAPLFNII*KSCTEHSSSDL
Trigger: AAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGCATATGATGTTGAACAGTGGTGCAAACTCAACCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTTTAGGTCCAAATTTCTaGGCTGCCACTGCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLALGPNF*AATAAL
Trigger: CAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAA...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 3 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAAAGCTGATCATGATCTaGTACAACATTATGACAGCA +
Preference number: 3 (lower is better)
Translates to: PATKEASLCCGSQHKRPSKLIMI*YNIMTA
Trigger: TGCTGTCATAATGTTGTACAAGATCATGATCAGCTT...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGCCTCCAGAATATATATaGGGTAAAGGATCTGTTTGC +
Preference number: 3 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQPPEYI*GKGSVC
Trigger: GCAAACAGATCCTTTACCCAATATATATTCTGGAGG...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR GCA 72 bp TCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTaGCACCTTACAGTCCTTTTGTTTTTCCTATTCTTG +
Preference number: 3 (lower is better)
Translates to: SKVYYSCLVLPS*HLTVLLFFLFL
Trigger: CAAGAATAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR CCA 72 bp GGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCCATCAACAAATTAGGA +
Preference number: 3 (lower is better)
Translates to: GITSHKRGLSLL*FTTQKAINKLG
Trigger: TCCTAATTTGTTGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACTTTTTCCAGATCCAGTaGGAGCAGAAGCCAGAAGTT +
Preference number: 3 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNFFQIQ*EQKPEV
Trigger: AACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAA...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCTTTTTCCAGATCCAGTaGGAGCAGAAGCCAGAAGTT +
Preference number: 3 (lower is better)
Translates to: CTNQNPDFSCSETVDCVIFFQIQ*EQKPEV
Trigger: AACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAA...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCATTGTCCAGGTTGAGTTaGCACCACTGTTCAACATCA +
Preference number: 3 (lower is better)
Translates to: KPFMYSGTGHPACCITLALSRLS*HHCSTS
Trigger: TGATGTTGAACAGTGGTGCAAACTCAACCTGGACAA...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 3 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTGCTAAGGCAGGAGGATaGTGTGAGGTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSAKAGG*CEVRSS
Trigger: TGAACTCCTGACCTCACACAATCCTCCTGCCTTAGC...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTCACCTTCCTTCACACTaGAAGGGAAAAGTCCTTAAG +
Preference number: 3 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLAHLPSH*KGKVLK
Trigger: CTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTG...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CAA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATGTGTTATCTCTCTGTaGTTGTGTTCTCTCTGCATG +
Preference number: 3 (lower is better)
Translates to: VVSENLLCILVQDTQPAVCVISL*LCSLCM
Trigger: CATGCAGAGAGAACACAACAACAGAGAGATAACACA...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CAA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATCTCTGAACCCAGTTTaGCCATCTTCAAACAGTTTA +
Preference number: 3 (lower is better)
Translates to: VVSENLLCILVQDTQPAVSLNPV*PSSNSL
Trigger: TAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGA...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 3 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp GAGAAAATCAAGGTTAGAAACAGCTACTGTCATTTGTCCAGATCATACAGCTACCACCTTCCTTCACACTaGAAGGGAAAAGTCCTTAAG +
Preference number: 3 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYHLPSH*KGKVLK
Trigger: CTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTG...GTAGCTGTATGATCTGGACAAATGACAGTAGCTGTTTCTAACCTTGATTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615769.2
3UTR-3UTR CAA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGTGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 3 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILCQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACATGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 3 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTCQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAAGCTGATCATGATCTaGTACAACATTATGACAGCA +
Preference number: 3 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPKLIMI*YNIMTA
Trigger: TGCTGTCATAATGTTGTACAAGATCATGATCAGCTT...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGTTAGGTCCAAATTTCTaGGCTGCCACTGCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKLGPNF*AATAAL
Trigger: CAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAA...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 3 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR TCA 72 bp AGTCGAGAATTGATTTTATATTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCAGGAAGATCGGTTCCT +
Preference number: 3 (lower is better)
Translates to: SRELILYSWSSC*NVAIGSGRSVP
Trigger: AGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCTCGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR GCA 72 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTaGTGTATAACATTAGCAACGCTTCTTAATAATGGC +
Preference number: 3 (lower is better)
Translates to: KPFMYSGTGHPA*CITLATLLNNG
Trigger: GCCATTATTAAGAAGCGTTGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR CCA 72 bp TTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTT +
Preference number: 3 (lower is better)
Translates to: FIFLVKLLKCSN*VRKIGSLDVNF
Trigger: AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 3 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLAVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CAA 90 bp GATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCTCTCTGGTTAACAGAATAACAAGAACAGGTGGATaGAAACCCTTTTTAACAAGT +
Preference number: 3 (lower is better)
Translates to: DFSCSETVDCVISLVNRITRTGG*KPFLTS
Trigger: ACTTGTTAAAAAGGGTTTCAATCCACCTGTTCTTGT...TATTCTGTTAACCAGAGAGATAACACAGTCCACAGTTTCAGAGCAGGAAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
3UTR-3UTR CAA 90 bp TTAACTTTTGTCTTCAAGAGCTACTTTCTTCTTGCTGTTCTGACCAGTGACCTTTGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 3 (lower is better)
Translates to: LTFVFKSYFLLAVLTSDLCQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...AAGGTCACTGGTCAGAACAGCAAGAAGAAAGTAGCTCTTGAAGACAAAAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR-3UTR CAA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAA +
Preference number: 3 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSKRGLS*LWFTTQ
Trigger: TTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTT...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAA +
Preference number: 3 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEKRGLS*LWFTTQ
Trigger: TTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTT...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAATGTGTTATCTCTCTGTaGTTGTGTTCTCTCTGCATG +
Preference number: 3 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHECVISL*LCSLCM
Trigger: CATGCAGAGAGAACACAACAACAGAGAGATAACACA...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
3UTR TCA 72 bp ATTTGGAGTAGTCACAAGAATATCAAACTTTTTAGATaGTTTAGGTCCAAATTTCTTGGCTGCCACTGCTGC +
Preference number: 3 (lower is better)
Translates to: IWSSHKNIKLFR*FRSKFLGCHCC
Trigger: GCAGCAGTGGCAGCCAAGAAATTTGGACCTAAATCATCTAAAAAGTTTGATATTCTTGTGACTACTCCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp ATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGTTTTGTCTTCAATCTTaGCTTCTACAGATGACATCC +
Preference number: 3 (lower is better)
Translates to: IDFIFLVKLLKCSNWVRKFCLQS*LLQMTS
Trigger: GGATGTCATCTGTAGAAGCAAAGATTGAAGACAAAA...CTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGTGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 3 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKCQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGAAGCTGATCATGATCTaGTACAACATTATGACAGCA +
Preference number: 3 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKKLIMI*YNIMTA
Trigger: TGCTGTCATAATGTTGTACAAGATCATGATCAGCTT...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAATGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 3 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHECQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR-3UTR CAA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTTGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 3 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSCQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR-3UTR CAA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGAAGCTGATCATGATCTaGTACAACATTATGACAGCA +
Preference number: 3 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLKLIMI*YNIMTA
Trigger: TGCTGTCATAATGTTGTACAAGATCATGATCAGCTT...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR TCA 72 bp ACTGTGTTATCTCTCTGTTGTTGTGTTCTCTCTGCATaGATAACATCCACATTAATACCTTCATATATGAGC +
Preference number: 3 (lower is better)
Translates to: TVLSLCCCVLSA*ITSTLIPSYMS
Trigger: GCTCATATATGAAGGTATTAATGTGGATGTTATTCATGCAGAGAGAACACAACAACAGAGAGATAACACAGT
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCCTCGCCTCAGCCTCCTaGGTAGCTGGGACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSLASAS*VAGTAG
Trigger: GCCTGCGGTCCCAGCTACTCAGGAGGCTGAGGCGAG...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615769.2
CDS-3UTR CCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCGTCTCGTGTCGAATTTaGCCCCCGCGCCGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSVSCRI*PPRRAG
Trigger: GCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGAC...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCGCTCTTCGGACCTTGTaGGATGTGCAGGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSALRTL*DVQARK
Trigger: TTTCCTGGCCTGCACATCCCACAAGGTCCGAAGAGC...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCCGGGAGGCTGAGGTTTaGGGATCACTTGAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSREAEV*GSLESK
Trigger: CTTAGACTCAAGTGATCCTCAAACCTCAGCCTCCCG...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCCGGCGAAAGAGATCGTaGACGTCCATCTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSRRKRS*TSIFTQ
Trigger: CTGGGTAAAGATGGACGTCCACGATCTCTTTCGCCG...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGAATCGAGCTGCGTCTaGCGAGAAGCGTCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGESSCV*REASRV
Trigger: GACACGAGACGCTTCTCGGCAGACGCAGCTCGATTC...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp AGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATGTCTCGTGTCGAATTTaGCCCCCGCGCCGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: RSQKFPTMQHNWDGLHLDVSCRI*PPRRAG
Trigger: GCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGAC...ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCCCATTTTGGGGCTTCTaGTGTGTTTGTGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSPFWGF*CVCDAP
Trigger: TGGAGCATCACAAACACATCAGAAGCCCCAAAATGG...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTTCCAGGTCAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGSRSGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTGGA...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTGAATCGAGCTGCGTCTaGCGAGAAGCGTCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLESSCV*REASRV
Trigger: GACACGAGACGCTTCTCGGCAGACGCAGCTCGATTC...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTAGTCTCGTGTCGAATTTaGCCCCCGCGCCGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: IWLASSRVGDIIRALKPLVSCRI*PPRRAG
Trigger: GCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGAC...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTGTCTCGTGTCGAATTTaGCCCCCGCGCCGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSVSCRI*PPRRAG
Trigger: GCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGAC...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTGTCTCGTGTCGAATTTaGCCCCCGCGCCGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASVSCRI*PPRRAG
Trigger: GCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGAC...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATGGAGCCCAAGGTGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHGAQGG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATTCACCCACCTTGGGCTCC...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp CAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAGAATCGAGCTGCGTCTaGCGAGAAGCGTCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: QARKMEASWSLNPVLPSSESSCV*REASRV
Trigger: GACACGAGACGCTTCTCGGCAGACGCAGCTCGATTC...TGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TCCAGATCCAGTTGGAGCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGCTCTTCGGACCTTGTaGGATGTGCAGGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SRSSWSRSQKFPTMQHNWALRTL*DVQARK
Trigger: TTTCCTGGCCTGCACATCCCACAAGGTCCGAAGAGC...CCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCTCCAACTGGATCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCGTGGATATATTCCACTaGGCTAGTTGGAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSVDIFH*ASWKVI
Trigger: TATGACTTTCCAACTAGCTCAGTGGAATATATCCAC...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTCTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGLPSTK*AVEGVF
Trigger: AAATACCCCTTCCACTGCTCACTTTGTGGATGGTAG...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTCCTGCCTCAGACTCCTaGGTAGCCGGGACTATGCCA +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLPASDS*VAGTMP
Trigger: TGGCATAGTCCCGGCTACTCAGGAGTCTGAGGCAGG...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCCTCAAGCACGTAGTTTaGTTGCTAACAAGTAATGGA +
Preference number: 4 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSLKHVV*LLTSNG
Trigger: TCCATTACTTGTTAGCAAGCAAACTACGTGCTTGAG...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTACTCTTGTTTGGTTCTaGCATCCTGCCACCTTACAG +
Preference number: 4 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGTLVWF*HPATLQ
Trigger: CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGT...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCCGGCGAAAGAGATCGTaGACGTCCATCTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTRRKRS*TSIFTQ
Trigger: CTGGGTAAAGATGGACGTCCACGATCTCTTTCGCCG...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTAGTCTCGTGTCGAATTTaGCCCCCGCGCCGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: VVSENLLCILVQDTQPAVVSCRI*PPRRAG
Trigger: GCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGAC...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTTTCCTTTTTCCTATCTaGAATCGAGCTGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGFLFPI*NRAASA
Trigger: GGCAGACGCAGCTCGATTCCAGATAGGAAAAAGGAA...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp TCCAGATCCAGTTGGAGCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGCTTCTGATGTGTTTGTaGTGCTCCACACACACCTGG +
Preference number: 4 (lower is better)
Translates to: SRSSWSRSQKFPTMQHNWLLMCL*CSTHTW
Trigger: CCAGGTGTGTGTGGAGCATCACAAACACATCAGAAG...CCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCTCCAACTGGATCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTAAGCCAGCTGGTCTCTaGACCCAGTTTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLKPAGL*TQFCHL
Trigger: AAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTT...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTGCCTCAGACTCCTaGGTAGCCGGGACTATGCCA +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSPASDS*VAGTMP
Trigger: TGGCATAGTCCCGGCTACTCAGGAGTCTGAGGCAGG...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGTATCTGGAATCGAGCTaGGTCTGCCGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: RPCSITGMACIWIGVGIWYLESS*VCREAS
Trigger: AGACGCTTCTCGGCAGACGCAGCTCGATTCCAGATA...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TCCAGATCCAGTTGGAGCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGTGCTCCACACACACCTaGGACAGACTTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SRSSWSRSQKFPTMQHNWCSTHT*DRLLVS
Trigger: GGAAACAAGAAGTCTGTCCCAGGTGTGTGTGGAGCA...CCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCTCCAACTGGATCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTTTTTCCAGATCCAGTTaGAGCAGAAGCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGFSRSS*SRSQKF
Trigger: GAACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAA...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTCTCTGTGAATCTGGCTaGCAAGTTCTCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLLCESG*QVLVLV
Trigger: CACCAACACGAGAACTTGCCAGCCAGATTCACAGAG...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTACCTTTTATGTATTCTaGTACAGGACACCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGTFYVF*YRTPSL
Trigger: CAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGT...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTAAAAAGTCCAGTCCCTaGAGCACCTCCGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSKKSSP*STSEES
Trigger: TGATTCTTCGGAGGTGCTTCAGGGACTGGACTTTTT...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTTGCTGTTCTGACCAGTaGCCTTTTTCTGTTTATCCT +
Preference number: 4 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGCCSDQ*PFSVYP
Trigger: AGGATAAACAGAAAAAGGTCACTGGTCAGAACAGCA...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACACCTGCCTCAGACTCCTaGGTAGCCGGGACTATGCCA +
Preference number: 4 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTPASDS*VAGTMP
Trigger: TGGCATAGTCCCGGCTACTCAGGAGTCTGAGGCAGG...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTACCAAGTGCCAGGGTGTaGGCCACATGCCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLPSARV*ATCLGC
Trigger: ACAGCCCAGGCATGTGGCTCACACCCTGGCACTTGG...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCCTTGGCTGCCACTGCTaGTTTGTGGATCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTLGCHC*FVDHVY
Trigger: ATACACATGATCCACAAAGCAGCAGTGGCAGCCAAG...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGTTTCTTGGCTGCCACTaGTGCTTTGTGGATCATGTG +
Preference number: 4 (lower is better)
Translates to: AKVALNIALRTLWDVQARFLGCH*CFVDHV
Trigger: CACATGATCCACAAAGCAGCAGTGGCAGCCAAGAAA...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAGGGGTTTTGCCATGTTaGCCGGGCTGGTCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSGVLPC*PGWSLN
Trigger: GTTTAGAGACCAGCCCGGGCAACATGGCAAAACCCC...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCTTCAAGCTATTCTCCTaGCTCAGACTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTFKLFS*LRLLSS
Trigger: GCTACTCAGGAGTCTGAGGCAGGAGAATAGCTTGAA...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGTTCCTTTTTCCTATCTaGAATCGAGCTGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: AKVALNIALRTLWDVQARFLFPI*NRAASA
Trigger: GGCAGACGCAGCTCGATTCCAGATAGGAAAAAGGAA...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGTGCTCCACACACACCTaGGACAGACTTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLCSTHT*DRLLVS
Trigger: GGAAACAAGAAGTCTGTCCCAGGTGTGTGTGGAGCA...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: SQKFPTMQHNWDGLHLDWGMACI*IGVGIW
Trigger: CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC...CCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHGMACI*IGVGIW
Trigger: CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGCTCTGTGAATCTGGCTaGCAAGTTCTCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RPCSITGMACIWIGVGIWLCESG*QVLVLV
Trigger: CACCAACACGAGAACTTGCCAGCCAGATTCACAGAG...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGCTCTGTGAATCTGGCTaGCAAGTTCTCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLLCESG*QVLVLV
Trigger: CACCAACACGAGAACTTGCCAGCCAGATTCACAGAG...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCGCTCTTCGGACCTTGTaGGATGTGCAGGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HNWDGLHLDWRRHLETCIALRTL*DVQARK
Trigger: TTTCCTGGCCTGCACATCCCACAAGGTCCGAAGAGC...GATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTTTAGGCACAAACCACTaGTCAGGAACTGTACACGCA +
Preference number: 4 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSLGTNH*SGTVHA
Trigger: TGCGTGTACAGTTCCTGACCAGTGGTTTGTGCCTAA...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTTCTCCCCTCTTTCTCTaGAACTCGGTAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSSPLFL*NSVASC
Trigger: ACATGAAGCTACCGAGTTCCAGAGAAAGAGGGGAGA...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR CAA 72 bp CAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTaGCATTTGGATTGGCGTAGGCATTTGGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: QKFPTMQHNWDG*HLDWRRHLETC
Trigger: GCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAACTTCTGATGTGTTTGTaGTGCTCCACACACACCTGG +
Preference number: 4 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKLLMCL*CSTHTW
Trigger: CCAGGTGTGTGTGGAGCATCACAAACACATCAGAAG...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATCTTCTGATGTGTTTGTaGTGCTCCACACACACCTGG +
Preference number: 4 (lower is better)
Translates to: RSQKFPTMQHNWDGLHLDLLMCL*CSTHTW
Trigger: CCAGGTGTGTGTGGAGCATCACAAACACATCAGAAG...ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCCATTTTGGGGCTTCTaGTGTGTTTGTGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: KFPTMQHNWDGLHLDWRRPFWGF*CVCDAP
Trigger: TGGAGCATCACAAACACATCAGAAGCCCCAAAATGG...CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATCCATTTTGGGGCTTCTaGTGTGTTTGTGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHPFWGF*CVCDAP
Trigger: TGGAGCATCACAAACACATCAGAAGCCCCAAAATGG...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTGGAGCCCAAGGTGGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SIPLASKAVQIRTQIFPAGAQGG*ITRSGD
Trigger: ATCTCCTGACCTCGTGATTCACCCACCTTGGGCTCC...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTGGCAGGAGAATCACTTaGACCCAGGAGTCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLGRRIT*TQESEV
Trigger: AACCTCTGACTCCTGGGTTCAAGTGATTCTCCTGCC...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGGAATCGAGCTGCGTCTaGCGAGAAGCGTCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVESSCV*REASRV
Trigger: GACACGAGACGCTTCTCGGCAGACGCAGCTCGATTC...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCATATCTGGAATCGAGCTaGGTCTGCCGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSYLESS*VCREAS
Trigger: AGACGCTTCTCGGCAGACGCAGCTCGATTCCAGATA...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACTATCTGGAATCGAGCTaGGTCTGCCGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDYLESS*VCREAS
Trigger: AGACGCTTCTCGGCAGACGCAGCTCGATTCCAGATA...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLITGMA*IWIGVG
Trigger: GCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHITGMA*IWIGVG
Trigger: GCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATCTTGGCTGCCACTGCTaGTTTGTGGATCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHLGCHC*FVDHVY
Trigger: ATACACATGATCCACAAAGCAGCAGTGGCAGCCAAG...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGTTTCTTGGCTGCCACTaGTGCTTTGTGGATCATGTG +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLFLGCH*CFVDHV
Trigger: CACATGATCCACAAAGCAGCAGTGGCAGCCAAGAAA...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCCAAATTTCTTGGCTaGCACTGCTGCTTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLSKFLG*HCCFVD
Trigger: ATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGA...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp TCCAGATCCAGTTGGAGCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGTCCAAATTTCTTGGCTaGCACTGCTGCTTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SRSSWSRSQKFPTMQHNWSKFLG*HCCFVD
Trigger: ATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGA...CCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCTCCAACTGGATCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp ACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAGGACCTTGTGGGATGTaGAGGCCAGGAAAATGGAAG +
Preference number: 4 (lower is better)
Translates to: TGMACIWIGVGIWKPASRGPCGM*RPGKWK
Trigger: CTTCCATTTTCCTGGCCTGCACATCCCACAAGGTCC...TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACCGGCGAAAGAGATCGTaGACGTCCATCTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDRRKRS*TSIFTQ
Trigger: CTGGGTAAAGATGGACGTCCACGATCTCTTTCGCCG...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGTTCCTTTTTCCTATCTaGAATCGAGCTGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RPCSITGMACIWIGVGIWFLFPI*NRAASA
Trigger: GGCAGACGCAGCTCGATTCCAGATAGGAAAAAGGAA...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 4 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGGGCTTGCATTTGGATTaGCGTAGGCATTTGGAAACC +
Preference number: 4 (lower is better)
Translates to: RPCSITGMACIWIGVGIWGLHLD*RRHLET
Trigger: GGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCC...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGGCTTGCATTTGGATTaGCGTAGGCATTTGGAAACC +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLGLHLD*RRHLET
Trigger: GGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCC...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTGCTCTTCGGACCTTGTaGGATGTGCAGGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASALRTL*DVQARK
Trigger: TTTCCTGGCCTGCACATCCCACAAGGTCCGAAGAGC...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGCCTGCTCTGAAACTGTaGACTGTGTTATCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLPALKL*TVLSLW
Trigger: CCAGAGAGATAACACAGTCCACAGTTTCAGAGCAGG...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
CDS-3UTR CCA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCACCTTTTATGTATTCTaGTACAGGACACCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTTFYVF*YRTPSL
Trigger: CAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGT...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGACCTTTTATGTATTCTaGTACAGGACACCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AKVALNIALRTLWDVQARTFYVF*YRTPSL
Trigger: CAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGT...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTCTTTGCTTCTACAGATaGCATCCACTGTATAGTAGC +
Preference number: 4 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSLCFYR*HPLYSS
Trigger: GCTACTATACAGTGGATGTCATCTGTAGAAGCAAAG...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTAAGTTCTCGTGTTGGTaGTATAATCAGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLKFSCW*YNQGSE
Trigger: TTCAGAGCCCTGATTATATCACCAACACGAGAACTT...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp TCCAGATCCAGTTGGAGCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGAAGTTCTCGTGTTGGTaGTATAATCAGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SRSSWSRSQKFPTMQHNWKFSCW*YNQGSE
Trigger: TTCAGAGCCCTGATTATATCACCAACACGAGAACTT...CCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCTCCAACTGGATCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACAAGCCAGCTGGTCTCTaGACCCAGTTTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDKPAGL*TQFCHL
Trigger: AAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTT...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TGCTCCAATGGACACACTGATGACATTGTCCAGGTTGAGTTTGCACCACTGTTCAAGCCAGCTGGTCTCTaGACCCAGTTTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: CSNGHTDDIVQVEFAPLFKPAGL*TQFCHL
Trigger: AAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTT...GAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCACAGCACTAAGAAGTaGGCATATGTGCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: KFPTMQHNWDGLHLDWRRHSTKK*AYVQGI
Trigger: TATTCCCTGCACATATGCTCACTTCTTAGTGCTGTG...CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
CDS-3UTR TCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGCGGGAGGCTGAGGTTTaGGGATCACTTGAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQREAEV*GSLESK
Trigger: CTTAGACTCAAGTGATCCTCAAACCTCAGCCTCCCG...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATATCTGGAATCGAGCTaGGTCTGCCGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: IWLASSRVGDIIRALKPLYLESS*VCREAS
Trigger: AGACGCTTCTCGGCAGACGCAGCTCGATTCCAGATA...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTTCTGAAGCCTTTATTTaGGGGTTGTTTCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSSEAFI*GLFQLH
Trigger: ATGCAGCTGAAACAACCCGCAAATAAAGGCTTCAGA...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp AGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGTCCAAATTTCTTGGCTaGCACTGCTGCTTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SQKFPTMQHNWDGLHLDWSKFLG*HCCFVD
Trigger: ATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGA...CCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGTCCAAATTTCTTGGCTaGCACTGCTGCTTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: KFPTMQHNWDGLHLDWRRSKFLG*HCCFVD
Trigger: ATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGA...CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGTCCAAATTTCTTGGCTaGCACTGCTGCTTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: RPCSITGMACIWIGVGIWSKFLG*HCCFVD
Trigger: ATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGA...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGGGACCTTGTGGGATGTaGAGGCCAGGAAAATGGAAG +
Preference number: 4 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRGPCGM*RPGKWK
Trigger: CTTCCATTTTCCTGGCCTGCACATCCCACAAGGTCC...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTAGGACCTTGTGGGATGTaGAGGCCAGGAAAATGGAAG +
Preference number: 4 (lower is better)
Translates to: IWLASSRVGDIIRALKPLGPCGM*RPGKWK
Trigger: CTTCCATTTTCCTGGCCTGCACATCCCACAAGGTCC...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTTACTGCAGAATTCCTTaGTCCAATGGACACACTGAT +
Preference number: 4 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSYCRIP*SNGHTD
Trigger: ATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTA...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTGGGGTTTTGCCATGTTaGCCGGGCTGGTCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPGVLPC*PGWSLN
Trigger: GTTTAGAGACCAGCCCGGGCAACATGGCAAAACCCC...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACACCAGGAGTCAGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTPGVRG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCTGACTCCTGG...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGCGGCGAAAGAGATCGTaGACGTCCATCTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFARRKRS*TSIFTQ
Trigger: CTGGGTAAAGATGGACGTCCACGATCTCTTTCGCCG...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAGTCTCGTGTCGAATTTaGCCCCCGCGCCGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEVSCRI*PPRRAG
Trigger: GCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGAC...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp GGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAATGTGCTCCACACACACCTaGGACAGACTTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GMACIWIGVGIWKPASRMCSTHT*DRLLVS
Trigger: GGAAACAAGAAGTCTGTCCCAGGTGTGTGTGGAGCA...CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCATGCTCCACACACACCTaGGACAGACTTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSCSTHT*DRLLVS
Trigger: GGAAACAAGAAGTCTGTCCCAGGTGTGTGTGGAGCA...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACTGCTCCACACACACCTaGGACAGACTTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDCSTHT*DRLLVS
Trigger: GGAAACAAGAAGTCTGTCCCAGGTGTGTGTGGAGCA...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 4 (lower is better)
Translates to: SQKFPTMQHNWDGLHLDWLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...CCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 4 (lower is better)
Translates to: KFPTMQHNWDGLHLDWRRLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 4 (lower is better)
Translates to: RPCSITGMACIWIGVGIWLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 4 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGACCATGCAGCATAACTaGGATGGCTTGCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: SQKFPTMQHNWDGLHLDWTMQHN*DGLHLD
Trigger: ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGT...CCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGACCTTTTATGTATTCTaGTACAGGACACCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLTFYVF*YRTPSL
Trigger: CAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGT...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGCCTGCTCTGAAACTGTaGACTGTGTTATCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RPCSITGMACIWIGVGIWPALKL*TVLSLC
Trigger: ACAGAGAGATAACACAGTCCACAGTTTCAGAGCAGG...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTCCACAAAGTGAGCAGTaGAAGGGGTATTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSPQSEQ*KGYLMS
Trigger: TGACATTAAATACCCCTTCCACTGCTCACTTTGTGG...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCGACCTCAGTTTGTCCTaGAATCCTTTTTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTDLSLS*NPFCSS
Trigger: AGAGGAACAAAAAGGATTCCAGGACAAACTGAGGTC...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTATACGGTGGGTACACTaGTGTTCTTTTATTGTTACT +
Preference number: 4 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGIRWVH*CSFIVT
Trigger: AGTAACAATAAAAGAACACCAGTGTACCCACCGTAT...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617633.5
CDS-3UTR TCA 90 bp TGCTCCAATGGACACACTGATGACATTGTCCAGGTTGAGTTTGCACCACTGTTCAAAAAGTCCAGTCCCTaGAGCACCTCCGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: CSNGHTDDIVQVEFAPLFKKSSP*STSEES
Trigger: TGATTCTTCGGAGGTGCTTCAGGGACTGGACTTTTT...GAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGCTTCTGATGTGTTTGTaGTGCTCCACACACACCTGG +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFALLMCL*CSTHTW
Trigger: CCAGGTGTGTGTGGAGCATCACAAACACATCAGAAG...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGCTTCTGATGTGTTTGTaGTGCTCCACACACACCTGG +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLLLMCL*CSTHTW
Trigger: CCAGGTGTGTGTGGAGCATCACAAACACATCAGAAG...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGCTTCTGATGTGTTTGTaGTGCTCCACACACACCTGG +
Preference number: 4 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRLLMCL*CSTHTW
Trigger: CCAGGTGTGTGTGGAGCATCACAAACACATCAGAAG...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCTTTGCTTCTACAGATaGCATCCACTGTATAGTAGC +
Preference number: 4 (lower is better)
Translates to: KFPTMQHNWDGLHLDWRRLCFYR*HPLYSS
Trigger: GCTACTATACAGTGGATGTCATCTGTAGAAGCAAAG...CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCAGATTTTTCCTGCTCTaGAACTGTGGACTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTRFFLL*NCGLCY
Trigger: ATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCT...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTTGGAAAGTCATAGTTaGTCACCAAGTTCACACCTT +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLLESHS*SPSSHL
Trigger: AAGGTGTGAACTTGGTGATCAACTATGACTTTCCAA...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTGTGGATATATTCCACTaGGCTAGTTGGAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLVDIFH*ASWKVI
Trigger: TATGACTTTCCAACTAGCTCAGTGGAATATATCCAC...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp CAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: QARKMEASWSLNPVLPSSTFLHT*REKSLR
Trigger: TCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGT...TGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTGTCAAGGCTTTATTTTaGATTTCTGTTCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLVKALF*ISVPDA
Trigger: GGCATCTGGAACAGAAATTCAAAATAAAGCCTTGAC...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGGTCAAGGCTTTATTTTaGATTTCTGTTCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: AKVALNIALRTLWDVQARVKALF*ISVPDA
Trigger: GGCATCTGGAACAGAAATTCAAAATAAAGCCTTGAC...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp CATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCCTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: HNWDGLHLDWRRHLETCILPSTK*AVEGVF
Trigger: AAATACCCCTTCCACTGCTCACTTTGTGGATGGTAG...GATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAATCCAGGTCAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKSRSGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTGGA...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCATTAGATGCCCTCTTGTaGTGCTTTAGCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSLDALL*CFSIMA
Trigger: GGCCATGATGCTAAAGCATCACAAGAGGGCATCTAA...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGTATCTGGAATCGAGCTaGGTCTGCCGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILYLESS*VCREAS
Trigger: AGACGCTTCTCGGCAGACGCAGCTCGATTCCAGATA...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLITGMA*IWIGVG
Trigger: GCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGGCGGGTTGTTTCAGCTaGATTAAAATAGGAATGCTA +
Preference number: 4 (lower is better)
Translates to: AKVALNIALRTLWDVQARAGCFS*IKIGML
Trigger: TAGCATTCCTATTTTAATGCAGCTGAAACAACCCGC...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGTCTGAAGCCTTTATTTaGGGGTTGTTTCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RPCSITGMACIWIGVGIWSEAFI*GLFQLH
Trigger: ATGCAGCTGAAACAACCCGCAAATAAAGGCTTCAGA...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGTCTGAAGCCTTTATTTaGGGGTTGTTTCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLSEAFI*GLFQLH
Trigger: ATGCAGCTGAAACAACCCGCAAATAAAGGCTTCAGA...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCCTTGGCTGCCACTGCTaGTTTGTGGATCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: HNWDGLHLDWRRHLETCILGCHC*FVDHVY
Trigger: ATACACATGATCCACAAAGCAGCAGTGGCAGCCAAG...GATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACCTTGGCTGCCACTGCTaGTTTGTGGATCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDLGCHC*FVDHVY
Trigger: ATACACATGATCCACAAAGCAGCAGTGGCAGCCAAG...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp ACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGACTTGGCTGCCACTGCTaGTTTGTGGATCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: TGMACIWIGVGIWKPASRLGCHC*FVDHVY
Trigger: ATACACATGATCCACAAAGCAGCAGTGGCAGCCAAG...TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCATTTCTTGGCTGCCACTaGTGCTTTGTGGATCATGTG +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSFLGCH*CFVDHV
Trigger: CACATGATCCACAAAGCAGCAGTGGCAGCCAAGAAA...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp ACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGATTTCTTGGCTGCCACTaGTGCTTTGTGGATCATGTG +
Preference number: 4 (lower is better)
Translates to: TGMACIWIGVGIWKPASRFLGCH*CFVDHV
Trigger: CACATGATCCACAAAGCAGCAGTGGCAGCCAAGAAA...TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGGACCTTGTGGGATGTaGAGGCCAGGAAAATGGAAG +
Preference number: 4 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTGPCGM*RPGKWK
Trigger: CTTCCATTTTCCTGGCCTGCACATCCCACAAGGTCC...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGTACTGCAGAATTCCTTaGTCCAATGGACACACTGAT +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLYCRIP*SNGHTD
Trigger: ATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTA...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAATTTCTGTTCCAGATaGCTCTCCACAGCATTCATC +
Preference number: 4 (lower is better)
Translates to: QARKMEASWSLNPVLPSSNFCSR*LSTAFI
Trigger: GATGAATGCTGTGGAGAGGCATCTGGAACAGAAATT...TGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTATTGGTTTTTACATTTaGAGGATTCAACTCAGGATG +
Preference number: 4 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGIGFYI*RIQLRM
Trigger: CATCCTGAGTTGAATCCTGCAAATGTAAAAACCAAT...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCATTCCTTTTTCCTATCTaGAATCGAGCTGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSFLFPI*NRAASA
Trigger: GGCAGACGCAGCTCGATTCCAGATAGGAAAAAGGAA...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp CAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAATTGGCGTAGGCATTTaGAAACCTGCATCTAGAATG +
Preference number: 4 (lower is better)
Translates to: QARKMEASWSLNPVLPSSIGVGI*KPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAAT...TGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGATTGGCGTAGGCATTTaGAAACCTGCATCTAGAATG +
Preference number: 4 (lower is better)
Translates to: RPCSITGMACIWIGVGIWIGVGI*KPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAAT...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp ACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAGGCTTGCATTTGGATTaGCGTAGGCATTTGGAAACC +
Preference number: 4 (lower is better)
Translates to: TGMACIWIGVGIWKPASRGLHLD*RRHLET
Trigger: GGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCC...TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAGGCTTGCATTTGGATTaGCGTAGGCATTTGGAAACC +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSGLHLD*RRHLET
Trigger: GGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCC...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFAGMACI*IGVGIW
Trigger: CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTTTTCCAGATCCAGTTaGAGCAGAAGCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RSQKFPTMQHNWDGLHLDFSRSS*SRSQKF
Trigger: GAACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAA...ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAAACCTTTTATGTATTCTaGTACAGGACACCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKTFYVF*YRTPSL
Trigger: CAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGT...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATTGGGAAGCAATTTCTaGCTGGGCGTGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VVSENLLCILVQDTQPAVLGSNF*LGVVAH
Trigger: GTGAGCCACCACGCCCAGCCAGAAATTGCTTCCCAA...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAATTGGGAAGCAATTTCTaGCTGGGCGTGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKLGSNF*LGVVAH
Trigger: GTGAGCCACCACGCCCAGCCAGAAATTGCTTCCCAA...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGGTTCGACCTATCCTGTaGATATATTCCACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: RPCSITGMACIWIGVGIWVRPIL*IYSTEL
Trigger: TAGCTCAGTGGAATATATCCACAGGATAGGTCGAAC...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATAAAATCCCAGGGAACTaGAATAACCAGCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHKIPGN*NNQPQK
Trigger: CTTTTGTGGCTGGTTATTCCAGTTCCCTGGGATTTT...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTGATGAGAAGTGGGGGTaGAAGACAGTGAGACTGATG +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSDEKWG*KTVRLM
Trigger: CATCAGTCTCACTGTCTTCCACCCCCACTTCTCATC...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAAAAAGTCCAGTCCCTaGAGCACCTCCGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASKKSSP*STSEES
Trigger: TGATTCTTCGGAGGTGCTTCAGGGACTGGACTTTTT...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAAAAGTCCAGTCCCTaGAGCACCTCCGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLKKSSP*STSEES
Trigger: TGATTCTTCGGAGGTGCTTCAGGGACTGGACTTTTT...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCATTTTGGGGCTTCTaGTGTGTTTGTGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSPFWGF*CVCDAP
Trigger: TGGAGCATCACAAACACATCAGAAGCCCCAAAATGG...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTACCATTTTGGGGCTTCTaGTGTGTTTGTGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: IWLASSRVGDIIRALKPLPFWGF*CVCDAP
Trigger: TGGAGCATCACAAACACATCAGAAGCCCCAAAATGG...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp ACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGATCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TGMACIWIGVGIWKPASRSWSSC*NVAIGS
Trigger: TGACCCAATTGCTACATTTCAGCAACTTGACCAGGA...TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLSWSSC*NVAIGS
Trigger: TGACCCAATTGCTACATTTCAGCAACTTGACCAGGA...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTGCATCTAGAATGTTCTaGAGTAGTCGAGAATTGATT +
Preference number: 4 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSASRMF*SSRELI
Trigger: AATCAATTCTCGACTACTTCAGAACATTCTAGATGC...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp TCCAGATCCAGTTGGAGCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGCATCTAGAATGTTCTaGAGTAGTCGAGAATTGATT +
Preference number: 4 (lower is better)
Translates to: SRSSWSRSQKFPTMQHNWASRMF*SSRELI
Trigger: AATCAATTCTCGACTACTTCAGAACATTCTAGATGC...CCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCTCCAACTGGATCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGTTTATTAACTCTCTGTaGATCTGGCTGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: KFPTMQHNWDGLHLDWRRFINSL*IWLASS
Trigger: AGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAA...CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATGTGGATATATTCCACTaGGCTAGTTGGAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHVDIFH*ASWKVI
Trigger: TATGACTTTCCAACTAGCTCAGTGGAATATATCCAC...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSLPSTK*AVEGVF
Trigger: AAATACCCCTTCCACTGCTCACTTTGTGGATGGTAG...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAGGCAGGAGAATCACTTaGACCCAGGAGTCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLGRRIT*TQESEV
Trigger: AACCTCTGACTCCTGGGTTCAAGTGATTCTCCTGCC...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp TTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTTATCTGGAATCGAGCTaGGTCTGCCGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: LLKCSNWVRKIGSLDVNFYLESS*VCREAS
Trigger: AGACGCTTCTCGGCAGACGCAGCTCGATTCCAGATA...AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTAATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: IWLASSRVGDIIRALKPLITGMA*IWIGVG
Trigger: GCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGCTTGGCTGCCACTGCTaGTTTGTGGATCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRLGCHC*FVDHVY
Trigger: ATACACATGATCCACAAAGCAGCAGTGGCAGCCAAG...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTTTCTTGGCTGCCACTaGTGCTTTGTGGATCATGTG +
Preference number: 4 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQFLGCH*CFVDHV
Trigger: CACATGATCCACAAAGCAGCAGTGGCAGCCAAGAAA...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCATCCAAATTTCTTGGCTaGCACTGCTGCTTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSSKFLG*HCCFVD
Trigger: ATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGA...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTTCTACAGTTTCTACTaGAGAATTCCTTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLFYSFY*RIPCSN
Trigger: ATTGGAGCAAGGAATTCTGCAGTAGAAACTGTAGAA...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTTTCTACAGTTTCTACTaGAGAATTCCTTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSFYSFY*RIPCSN
Trigger: ATTGGAGCAAGGAATTCTGCAGTAGAAACTGTAGAA...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAAAACCCAGATTTTTCCTaGTCTGAAACTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKNPDFS*SETVDC
Trigger: ACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTT...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTTTCAAGCTATTCTCCTaGCTCAGACTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSFKLFS*LRLLSS
Trigger: GCTACTCAGGAGTCTGAGGCAGGAGAATAGCTTGAA...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGTTCAAGCTATTCTCCTaGCTCAGACTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLFKLFS*LRLLSS
Trigger: GCTACTCAGGAGTCTGAGGCAGGAGAATAGCTTGAA...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTTTGGTTCTGCCATCCTaGCACCTTACAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSLVLPS*HLTVLL
Trigger: CAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAA...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGTTCCTTTTTCCTATCTaGAATCGAGCTGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFAFLFPI*NRAASA
Trigger: GGCAGACGCAGCTCGATTCCAGATAGGAAAAAGGAA...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTGCTCCACACACACCTaGGACAGACTTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVCSTHT*DRLLVS
Trigger: GGAAACAAGAAGTCTGTCCCAGGTGTGTGTGGAGCA...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTAGGCTTGCATTTGGATTaGCGTAGGCATTTGGAAACC +
Preference number: 4 (lower is better)
Translates to: IWLASSRVGDIIRALKPLGLHLD*RRHLET
Trigger: GGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCC...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAATGACCATGCAGCATAACTaGGATGGCTTGCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: GMACIWIGVGIWKPASRMTMQHN*DGLHLD
Trigger: ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGT...CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp ACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAACCATGCAGCATAACTaGGATGGCTTGCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: TGMACIWIGVGIWKPASRTMQHN*DGLHLD
Trigger: ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGT...TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTCTGTGAATCTGGCTaGCAAGTTCTCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SIPLASKAVQIRTQIFPALCESG*QVLVLV
Trigger: CACCAACACGAGAACTTGCCAGCCAGATTCACAGAG...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TGCTCCAATGGACACACTGATGACATTGTCCAGGTTGAGTTTGCACCACTGTTCAAAATGGAAGCCAGCTaGTCTCTGAACCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: CSNGHTDDIVQVEFAPLFKMEAS*SLNPVL
Trigger: CAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTT...GAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCAGCTCTTCGGACCTTGTaGGATGTGCAGGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KPFMYSGTGHPACCITLAALRTL*DVQARK
Trigger: TTTCCTGGCCTGCACATCCCACAAGGTCCGAAGAGC...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCACCTGCTCTGAAACTGTaGACTGTGTTATCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSPALKL*TVLSLC
Trigger: ACAGAGAGATAACACAGTCCACAGTTTCAGAGCAGG...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLGLSLL*FTTQKA
Trigger: GGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCC...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFAGLSLL*FTTQKA
Trigger: GGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCC...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp AGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATAAAATCCCAGGGAACTaGAATAACCAGCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: RSQKFPTMQHNWDGLHLDKIPGN*NNQPQK
Trigger: CTTTTGTGGCTGGTTATTCCAGTTCCCTGGGATTTT...ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTTCAAAGTCACACAGCTaGCAAATGGGTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSSKSHS*QMGCTS
Trigger: ACTGGTGCAACCCATTTGCCAGCTGTGTGACTTTGA...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGTCAAAGTCACACAGCTaGCAAATGGGTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLSKSHS*QMGCTS
Trigger: ACTGGTGCAACCCATTTGCCAGCTGTGTGACTTTGA...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGGATGAGAAGTGGGGGTaGAAGACAGTGAGACTGATG +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILDEKWG*KTVRLM
Trigger: CATCAGTCTCACTGTCTTCCACCCCCACTTCTCATC...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTTCGGTAGCTTCATGTTaGCACCTATCACAGACGCTG +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPSVASC*HLSQTL
Trigger: CAGCGTCTGTGATAGGTGCCAACATGAAGCTACCGA...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCCATTTTGGGGCTTCTaGTGTGTTTGTGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: SIPLASKAVQIRTQIFPAPFWGF*CVCDAP
Trigger: TGGAGCATCACAAACACATCAGAAGCCCCAAAATGG...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCACTTTGCTTCTACAGATaGCATCCACTGTATAGTAGC +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSLCFYR*HPLYSS
Trigger: GCTACTATACAGTGGATGTCATCTGTAGAAGCAAAG...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASSWSSC*NVAIGS
Trigger: TGACCCAATTGCTACATTTCAGCAACTTGACCAGGA...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSSWSSC*NVAIGS
Trigger: TGACCCAATTGCTACATTTCAGCAACTTGACCAGGA...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLSWSSC*NVAIGS
Trigger: TGACCCAATTGCTACATTTCAGCAACTTGACCAGGA...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGCATCTAGAATGTTCTaGAGTAGTCGAGAATTGATT +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLASRMF*SSRELI
Trigger: AATCAATTCTCGACTACTTCAGAACATTCTAGATGC...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTCAAACAGTTTATCTaGTTCGTCTACTACAAGCCA +
Preference number: 4 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHFKQFI*FVYYKP
Trigger: TGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAA...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAAAGATTTTTCCTGCTCTaGAACTGTGGACTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKRFFLL*NCGLCY
Trigger: ATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCT...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLTFLHT*REKSLR
Trigger: TCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGT...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTCTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPLPSTK*AVEGVF
Trigger: AAATACCCCTTCCACTGCTCACTTTGTGGATGGTAG...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTTTAGATGCCCTCTTGTaGTGCTTTAGCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPLDALL*CFSIMA
Trigger: GGCCATGATGCTAAAGCATCACAAGAGGGCATCTAA...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp TCGAGAATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCGAATCGAGCTGCGTCTaGCGAGAAGCGTCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: SRIDFIFLVKLLKCSNWVESSCV*REASRV
Trigger: GACACGAGACGCTTCTCGGCAGACGCAGCTCGATTC...GACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCTATCTGGAATCGAGCTaGGTCTGCCGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: CTNQNPDFSCSETVDCVIYLESS*VCREAS
Trigger: AGACGCTTCTCGGCAGACGCAGCTCGATTCCAGATA...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPITGMA*IWIGVG
Trigger: GCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp ACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGATCTGAAGCCTTTATTTaGGGGTTGTTTCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: TGMACIWIGVGIWKPASRSEAFI*GLFQLH
Trigger: ATGCAGCTGAAACAACCCGCAAATAAAGGCTTCAGA...TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGTCCAAATTTCTTGGCTaGCACTGCTGCTTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFASKFLG*HCCFVD
Trigger: ATCCACAAAGCAGCAGTGGCAGCCAAGAAATTTGGA...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TCCAGATCCAGTTGGAGCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGCTGTTCAACATCATATaGAAAAGTTGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: SRSSWSRSQKFPTMQHNWLFNII*KSCTEH
Trigger: ATGTTCAGTGCAACTTTTGCATATGATGTTGAACAG...CCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCTCCAACTGGATCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACTACTGCAGAATTCCTTaGTCCAATGGACACACTGAT +
Preference number: 4 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDYCRIP*SNGHTD
Trigger: ATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTA...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTTACTGCAGAATTCCTTaGTCCAATGGACACACTGAT +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLYCRIP*SNGHTD
Trigger: ATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTA...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGTTCTACAGTTTCTACTaGAGAATTCCTTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLFYSFY*RIPCSN
Trigger: ATTGGAGCAAGGAATTCTGCAGTAGAAACTGTAGAA...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCTTGTTGTGTTCTCTCTaGATGAATAACATCCACATT +
Preference number: 4 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTLLCSL*MNNIHI
Trigger: AATGTGGATGTTATTCATGCAGAGAGAACACAACAA...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTAACCCAGATTTTTCCTaGTCTGAAACTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLNPDFS*SETVDC
Trigger: ACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTT...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAAACCCAGATTTTTCCTaGTCTGAAACTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSNPDFS*SETVDC
Trigger: ACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTT...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTAGTGAAAAATGTAATTaGTTTTCCCTTATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLSEKCN*FSLIPC
Trigger: GCAGGGAATAAGGGAAAAGCAATTACATTTTTCACT...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp GCAAAAGTTGCACTGAACATAGCTCTTCGGACCTTGTGGGATGTGCAGGCCAGGAGTGAAAAATGTAATTaGTTTTCCCTTATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: AKVALNIALRTLWDVQARSEKCN*FSLIPC
Trigger: GCAGGGAATAAGGGAAAAGCAATTACATTTTTCACT...CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTATGTTCAGTGCAACTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAAATTTCTGTTCCAGATaGCTCTCCACAGCATTCATC +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSNFCSR*LSTAFI
Trigger: GATGAATGCTGTGGAGAGGCATCTGGAACAGAAATT...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTAATTTCTGTTCCAGATaGCTCTCCACAGCATTCATC +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLNFCSR*LSTAFI
Trigger: GATGAATGCTGTGGAGAGGCATCTGGAACAGAAATT...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACAATTTCTGTTCCAGATaGCTCTCCACAGCATTCATC +
Preference number: 4 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDNFCSR*LSTAFI
Trigger: GATGAATGCTGTGGAGAGGCATCTGGAACAGAAATT...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTTTCAAGCTATTCTCCTaGCTCAGACTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPFKLFS*LRLLSS
Trigger: GCTACTCAGGAGTCTGAGGCAGGAGAATAGCTTGAA...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGTTGGTTCTGCCATCCTaGCACCTTACAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILLVLPS*HLTVLL
Trigger: CAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAA...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGTTCCTTTTTCCTATCTaGAATCGAGCTGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILFLFPI*NRAASA
Trigger: GGCAGACGCAGCTCGATTCCAGATAGGAAAAAGGAA...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp AGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGTTTATTCCGTTCCTTTTTCCTATCTaGAATCGAGCTGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SNWVRKIGSLDVNFVFIPFLFPI*NRAASA
Trigger: GGCAGACGCAGCTCGATTCCAGATAGGAAAAAGGAA...CGGAATAAACACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 4 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTCTGAAATGTAGCAATTaGGTCAGGAAGATCGGTTCC +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASLKCSN*VRKIGS
Trigger: GGAACCGATCTTCCTGACCCAATTGCTACATTTCAG...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACATTGGCGTAGGCATTTaGAAACCTGCATCTAGAATG +
Preference number: 4 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDIGVGI*KPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAAT...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLGMACI*IGVGIW
Trigger: CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGACCATGCAGCATAACTaGGATGGCTTGCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFATMQHN*DGLHLD
Trigger: ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGT...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTACCATGCAGCATAACTaGGATGGCTTGCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSTMQHN*DGLHLD
Trigger: ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGT...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp TTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTCTCTGTGAATCTGGCTaGCAAGTTCTCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLKCSNWVRKIGSLDVNFLCESG*QVLVLV
Trigger: CACCAACACGAGAACTTGCCAGCCAGATTCACAGAG...AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGAAAATGGAAGCCAGCTaGTCTCTGAACCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQKMEAS*SLNPVL
Trigger: CAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTT...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGAAAATGGAAGCCAGCTaGTCTCTGAACCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFAKMEAS*SLNPVL
Trigger: CAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTT...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTCCTGCTCTGAAACTGTaGACTGTGTTATCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASPALKL*TVLSLC
Trigger: ACAGAGAGATAACACAGTCCACAGTTTCAGAGCAGG...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAGTAGCACCTTCTTCTTaGGAAGCAATTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSVAPSS*EAISEV
Trigger: GACTTCAGAAATTGCTTCCCAAGAAGAAGGTGCTAC...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp GAAGGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTCTCTTCTTTGCCTATTaGTTTTTACATTTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: EGPFDSLAALMSDQLSPLLFFAY*FLHLQD
Trigger: ATCCTGCAAATGTAAAAACCAATAGGCAAAGAAGAG...AAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR CAA 72 bp GCAGAATTCCTTGCTCCAATGGACACACTGATGACATaGTCCAGGTTGAGTTTGCACCACTGTTCAACATCA +
Preference number: 4 (lower is better)
Translates to: AEFLAPMDTLMT*SRLSLHHCSTS
Trigger: TGATGTTGAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAAAAAAGTCCAGTCCCTaGAGCACCTCCGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKKKSSP*STSEES
Trigger: TGATTCTTCGGAGGTGCTTCAGGGACTGGACTTTTT...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
44% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAAGCATCTAGAATGTTCTaGAGTAGTCGAGAATTGATT +
Preference number: 4 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKASRMF*SSRELI
Trigger: AATCAATTCTCGACTACTTCAGAACATTCTAGATGC...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGAAGTTCTCGTGTTGGTaGTATAATCAGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFAKFSCW*YNQGSE
Trigger: TTCAGAGCCCTGATTATATCACCAACACGAGAACTT...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAAGTTCTCGTGTTGGTaGTATAATCAGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASKFSCW*YNQGSE
Trigger: TTCAGAGCCCTGATTATATCACCAACACGAGAACTT...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTAAAGTTCTCGTGTTGGTaGTATAATCAGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: IWLASSRVGDIIRALKPLKFSCW*YNQGSE
Trigger: TTCAGAGCCCTGATTATATCACCAACACGAGAACTT...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTTTATTAACTCTCTGTaGATCTGGCTGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HNWDGLHLDWRRHLETCIFINSL*IWLASS
Trigger: AGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAA...GATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTTTTATTAACTCTCTGTaGATCTGGCTGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLFINSL*IWLASS
Trigger: AGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAA...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTAAGCCAGCTGGTCTCTaGACCCAGTTTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLAKPAGL*TQFCHL
Trigger: AAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTT...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCAAGCCAGCTGGTCTCTaGACCCAGTTTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: CTNQNPDFSCSETVDCVIKPAGL*TQFCHL
Trigger: AAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTT...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCGTGGATATATTCCACTaGGCTAGTTGGAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: HNWDGLHLDWRRHLETCIVDIFH*ASWKVI
Trigger: TATGACTTTCCAACTAGCTCAGTGGAATATATCCAC...GATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTTGCTGTTCTGACCAGTaGCCTTTTTCTGTTTATCCT +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSCCSDQ*PFSVYP
Trigger: AGGATAAACAGAAAAAGGTCACTGGTCAGAACAGCA...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLTFLHT*REKSLR
Trigger: TCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGT...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSTFLHT*REKSLR
Trigger: TCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGT...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTGATCTACTTATTAAATaGGGCACCATCAACCTAAGG +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLDLLIK*GTINLR
Trigger: CCTTAGGTTGATGGTGCCTCATTTAATAAGTAGATC...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTACAGCTACAAGCAATaGGGATCAGGATTCAAATCC +
Preference number: 4 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQYSYKQ*GSGFKS
Trigger: GGATTTGAATCCTGATCCTCATTGCTTGTAGCTGTA...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp GGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAATGCGCAAGAAGTTTATCTaGAGTCATCGTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: GMACIWIGVGIWKPASRMRKKFI*SHRLPF
Trigger: AAAAGGAAGACGATGACTTCAGATAAACTTCTTGCG...CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613633.1
ENST00000632030.1
CDS-3UTR GCA 90 bp GGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAATGGCGGGTTGTTTCAGCTaGATTAAAATAGGAATGCTA +
Preference number: 4 (lower is better)
Translates to: GMACIWIGVGIWKPASRMAGCFS*IKIGML
Trigger: TAGCATTCCTATTTTAATGCAGCTGAAACAACCCGC...CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATTTCTTGGCTGCCACTaGTGCTTTGTGGATCATGTG +
Preference number: 4 (lower is better)
Translates to: VVSENLLCILVQDTQPAVFLGCH*CFVDHV
Trigger: CACATGATCCACAAAGCAGCAGTGGCAGCCAAGAAA...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTTACTGCAGAATTCCTTaGTCCAATGGACACACTGAT +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSYCRIP*SNGHTD
Trigger: ATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTA...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGTACTGCAGAATTCCTTaGTCCAATGGACACACTGAT +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFAYCRIP*SNGHTD
Trigger: ATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTA...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCATTGTTGTGTTCTCTCTaGATGAATAACATCCACATT +
Preference number: 4 (lower is better)
Translates to: QARKMEASWSLNPVLPSSLLCSL*MNNIHI
Trigger: AATGTGGATGTTATTCATGCAGAGAGAACACAACAA...TGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTAACCCAGATTTTTCCTaGTCTGAAACTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSNPDFS*SETVDC
Trigger: ACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTT...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTTTGGTAGACAGCTCATaGTACCATCCACAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPLVDSS*YHPQSE
Trigger: CTCACTTTGTGGATGGTAGCATGAGCTGTCTACCAA...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTGGTAGACAGCTCATaGTACCATCCACAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVLVDSS*YHPQSE
Trigger: CTCACTTTGTGGATGGTAGCATGAGCTGTCTACCAA...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGTTGGTAGACAGCTCATaGTACCATCCACAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILLVDSS*YHPQSE
Trigger: CTCACTTTGTGGATGGTAGCATGAGCTGTCTACCAA...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp AGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGTTTATTCCGTTGGTAGACAGCTCATaGTACCATCCACAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: SNWVRKIGSLDVNFVFIPLVDSS*YHPQSE
Trigger: CTCACTTTGTGGATGGTAGCATGAGCTGTCTACCAA...CGGAATAAACACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp GAGAAAATCAAGGTTAGAAACAGTTACTGTCATTTGTCCAGATCATACAGCTACGGGGTTTTGCCATGTTaGCCGGGCTGGTCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYGVLPC*PGWSLN
Trigger: GTTTAGAGACCAGCCCGGGCAACATGGCAAAACCCC...GTAGCTGTATGATCTGGACAAATGACAGTAACTGTTTCTAACCTTGATTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617633.5
CDS-3UTR GCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGGCCACACTAGTCATGTaGTACATGATGATGTTTTGG +
Preference number: 4 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQATLVM*YMMMFW
Trigger: CCAAAACATCATCATGTAGCACATGACTAGTGTGGC...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTATTGGTTCTGCCATCCTaGCACCTTACAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLLVLPS*HLTVLL
Trigger: CAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAA...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAACTCTTGTTTGGTTCTaGCATCCTGCCACCTTACAG +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKTLVWF*HPATLQ
Trigger: CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGT...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACTGCTCCACACACACCTaGGACAGACTTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNCSTHT*DRLLVS
Trigger: GGAAACAAGAAGTCTGTCCCAGGTGTGTGTGGAGCA...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGATTGGCGTAGGCATTTaGAAACCTGCATCTAGAATG +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFAIGVGI*KPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAAT...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCTTGCATTTGGATTaGCGTAGGCATTTGGAAACC +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKGLHLD*RRHLET
Trigger: GGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCC...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCAGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: KPFMYSGTGHPACCITLAGMACI*IGVGIW
Trigger: CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GGTCTCAGATCCAACAAAGAGAAGCTCTTGTTCTACAGTTTCTACTGCAGAATTGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: GLRSNKEKLLFYSFYCRIGMACI*IGVGIW
Trigger: CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC...AATTCTGCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTTGGATCTGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGTTTTCCAGATCCAGTTaGAGCAGAAGCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LKCSNWVRKIGSLDVNFVFSRSS*SRSQKF
Trigger: GAACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAA...CACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGTTTTCCAGATCCAGTTaGAGCAGAAGCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILFSRSS*SRSQKF
Trigger: GAACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAA...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCCTCTGTGAATCTGGCTaGCAAGTTCTCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: CTNQNPDFSCSETVDCVILCESG*QVLVLV
Trigger: CACCAACACGAGAACTTGCCAGCCAGATTCACAGAG...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGTTTATTCCGAAAATGGAAGCCAGCTaGTCTCTGAACCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SNWVRKIGSLDVNFVFIPKMEAS*SLNPVL
Trigger: CAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTT...CGGAATAAACACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTACCTTTTATGTATTCTaGTACAGGACACCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPTFYVF*YRTPSL
Trigger: CAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGT...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAAATCCCAGGGAACTaGAATAACCAGCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLKIPGN*NNQPQK
Trigger: CTTTTGTGGCTGGTTATTCCAGTTCCCTGGGATTTT...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGGTAGCACCTTCTTCTTaGGAAGCAATTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLVAPSS*EAISEV
Trigger: GACTTCAGAAATTGCTTCCCAAGAAGAAGGTGCTAC...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTATGTACTACTCTTGTTTaGTTCTGCCATCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLCTTLV*FCHPAT
Trigger: GGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACA...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR CAA 72 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTaGAAGGGAAAAGTCCTTAAGAGTTCACCACATTTT +
Preference number: 4 (lower is better)
Translates to: ASPQHSSHLPSH*KGKVLKSSPHF
Trigger: AAAATGTGGTGAACTCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR CAA 72 bp TGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTaGTTTTTCCTATTCTTGCAGGCAAGTGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: CLVLPSCHLTVL*FFLFLQASAKQ
Trigger: CTGTTTTGCACTTGCCTGCAAGAATAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGAGTTCATCATTCACCTaGAGTCATCGTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRSSSFT*SHRLPF
Trigger: AAAAGGAAGACGATGACTTCAGGTGAATGATGAACT...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
CDS-3UTR TCA 90 bp TGCTCCAATGGACACACTGATGACATTGTCCAGGTTGAGTTTGCACCACTGTTCTTCAAACAGTTTATCTaGTTCGTCTACTACAAGCCA +
Preference number: 4 (lower is better)
Translates to: CSNGHTDDIVQVEFAPLFFKQFI*FVYYKP
Trigger: TGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAA...GAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTTCAAACAGTTTATCTaGTTCGTCTACTACAAGCCA +
Preference number: 4 (lower is better)
Translates to: HNWDGLHLDWRRHLETCIFKQFI*FVYYKP
Trigger: TGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAA...GATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGAGATTTTTCCTGCTCTaGAACTGTGGACTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRRFFLL*NCGLCY
Trigger: ATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCT...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTTGGAAAGTCATAGTTaGTCACCAAGTTCACACCTT +
Preference number: 4 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQLESHS*SPSSHL
Trigger: AAGGTGTGAACTTGGTGATCAACTATGACTTTCCAA...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGTTGGAAAGTCATAGTTaGTCACCAAGTTCACACCTT +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFALESHS*SPSSHL
Trigger: AAGGTGTGAACTTGGTGATCAACTATGACTTTCCAA...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTGTGGATATATTCCACTaGGCTAGTTGGAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASVDIFH*ASWKVI
Trigger: TATGACTTTCCAACTAGCTCAGTGGAATATATCCAC...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGTGCTGTTCTGACCAGTaGCCTTTTTCTGTTTATCCT +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILCCSDQ*PFSVYP
Trigger: AGGATAAACAGAAAAAGGTCACTGGTCAGAACAGCA...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACATGCTGTTCTGACCAGTaGCCTTTTTCTGTTTATCCT +
Preference number: 4 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTCCSDQ*PFSVYP
Trigger: AGGATAAACAGAAAAAGGTCACTGGTCAGAACAGCA...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTGCTGTTCTGACCAGTaGCCTTTTTCTGTTTATCCT +
Preference number: 4 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVCCSDQ*PFSVYP
Trigger: AGGATAAACAGAAAAAGGTCACTGGTCAGAACAGCA...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGGTCAAGGCTTTATTTTaGATTTCTGTTCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQVKALF*ISVPDA
Trigger: GGCATCTGGAACAGAAATTCAAAATAAAGCCTTGAC...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTGTCAAGGCTTTATTTTaGATTTCTGTTCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASVKALF*ISVPDA
Trigger: GGCATCTGGAACAGAAATTCAAAATAAAGCCTTGAC...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCCTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: CTNQNPDFSCSETVDCVILPSTK*AVEGVF
Trigger: AAATACCCCTTCCACTGCTCACTTTGTGGATGGTAG...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTGATCTACTTATTAAATaGGGCACCATCAACCTAAGG +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSDLLIK*GTINLR
Trigger: CCTTAGGTTGATGGTGCCTCATTTAATAAGTAGATC...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGGATCTACTTATTAAATaGGGCACCATCAACCTAAGG +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFADLLIK*GTINLR
Trigger: CCTTAGGTTGATGGTGCCTCATTTAATAAGTAGATC...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACATACAGCTACAAGCAATaGGGATCAGGATTCAAATCC +
Preference number: 4 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTYSYKQ*GSGFKS
Trigger: GGATTTGAATCCTGATCCTCATTGCTTGTAGCTGTA...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNITGMA*IWIGVG
Trigger: GCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTAGCGGGTTGTTTCAGCTaGATTAAAATAGGAATGCTA +
Preference number: 4 (lower is better)
Translates to: IWLASSRVGDIIRALKPLAGCFS*IKIGML
Trigger: TAGCATTCCTATTTTAATGCAGCTGAAACAACCCGC...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGGCGGGTTGTTTCAGCTaGATTAAAATAGGAATGCTA +
Preference number: 4 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRAGCFS*IKIGML
Trigger: TAGCATTCCTATTTTAATGCAGCTGAAACAACCCGC...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTGCGGGTTGTTTCAGCTaGATTAAAATAGGAATGCTA +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASAGCFS*IKIGML
Trigger: TAGCATTCCTATTTTAATGCAGCTGAAACAACCCGC...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTTCTGAAGCCTTTATTTaGGGGTTGTTTCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SIPLASKAVQIRTQIFPASEAFI*GLFQLH
Trigger: ATGCAGCTGAAACAACCCGCAAATAAAGGCTTCAGA...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTCTGAAGCCTTTATTTaGGGGTTGTTTCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVSEAFI*GLFQLH
Trigger: ATGCAGCTGAAACAACCCGCAAATAAAGGCTTCAGA...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGAACCCAGATTTTTCCTaGTCTGAAACTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVNPDFS*SETVDC
Trigger: ACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTT...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGAACCCAGATTTTTCCTaGTCTGAAACTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILNPDFS*SETVDC
Trigger: ACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTT...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAAAGTGAAAAATGTAATTaGTTTTCCCTTATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKSEKCN*FSLIPC
Trigger: GCAGGGAATAAGGGAAAAGCAATTACATTTTTCACT...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGAATTTCTGTTCCAGATaGCTCTCCACAGCATTCATC +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILNFCSR*LSTAFI
Trigger: GATGAATGCTGTGGAGAGGCATCTGGAACAGAAATT...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAGGGGTTTTGCCATGTTaGCCGGGCTGGTCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEGVLPC*PGWSLN
Trigger: GTTTAGAGACCAGCCCGGGCAACATGGCAAAACCCC...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAACCAGGAGTCAGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEPGVRG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCTGACTCCTGG...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp ATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGCGGCGAAAGAGATCGTaGACGTCCATCTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: IDFIFLVKLLKCSNWVRKRRKRS*TSIFTQ
Trigger: CTGGGTAAAGATGGACGTCCACGATCTCTTTCGCCG...CTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGATTGGCGTAGGCATTTaGAAACCTGCATCTAGAATG +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILIGVGI*KPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAAT...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCAGGCTTGCATTTGGATTaGCGTAGGCATTTGGAAACC +
Preference number: 4 (lower is better)
Translates to: KPFMYSGTGHPACCITLAGLHLD*RRHLET
Trigger: GGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCC...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAACCATGCAGCATAACTaGGATGGCTTGCATTTGGAT +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLTMQHN*DGLHLD
Trigger: ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGT...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTAAAAATGGAAGCCAGCTaGTCTCTGAACCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VVSENLLCILVQDTQPAVKMEAS*SLNPVL
Trigger: CAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTT...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAAAAATGGAAGCCAGCTaGTCTCTGAACCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKKMEAS*SLNPVL
Trigger: CAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTT...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
43% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTGCTCTTCGGACCTTGTaGGATGTGCAGGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSALRTL*DVQARK
Trigger: TTTCCTGGCCTGCACATCCCACAAGGTCCGAAGAGC...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAACCTTTTATGTATTCTaGTACAGGACACCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKTFYVF*YRTPSL
Trigger: CAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGT...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTTCGACCTATCCTGTaGATATATTCCACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTVRPIL*IYSTEL
Trigger: TAGCTCAGTGGAATATATCCACAGGATAGGTCGAAC...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp CTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGGTTCGACCTATCCTGTaGATATATTCCACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: LKCSNWVRKIGSLDVNFVVRPIL*IYSTEL
Trigger: TAGCTCAGTGGAATATATCCACAGGATAGGTCGAAC...CACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp AGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGTTTATTCCGCCACAAAGTGAGCAGTaGAAGGGGTATTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: SNWVRKIGSLDVNFVFIPPQSEQ*KGYLMS
Trigger: TGACATTAAATACCCCTTCCACTGCTCACTTTGTGG...CGGAATAAACACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAAAAATCCCAGGGAACTaGAATAACCAGCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTKIPGN*NNQPQK
Trigger: CTTTTGTGGCTGGTTATTCCAGTTCCCTGGGATTTT...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAAAATCCCAGGGAACTaGAATAACCAGCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPKIPGN*NNQPQK
Trigger: CTTTTGTGGCTGGTTATTCCAGTTCCCTGGGATTTT...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCAATACGGTGGGTACACTaGTGTTCTTTTATTGTTACT +
Preference number: 4 (lower is better)
Translates to: PATKEASLCCGSQHKRPSIRWVH*CSFIVT
Trigger: AGTAACAATAAAAGAACACCAGTGTACCCACCGTAT...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR CAA 72 bp AGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTaGCCATCTTCAAACAGTTTATCTGATTCGTCTACT +
Preference number: 4 (lower is better)
Translates to: RKMEASWSLNPV*PSSNSLSDSST
Trigger: AGTAGACGAATCAGATAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR CAA 72 bp CCAATGGACACACTGATGACATTGTCCAGGTTGAGTTaGCACCACTGTTCAACATCATATGCAAAAGTTGCA +
Preference number: 4 (lower is better)
Translates to: PMDTLMTLSRLS*HHCSTSYAKVA
Trigger: TGCAACTTTTGCATATGATGTTGAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
3UTR CAA 72 bp CTTGCTCCAATGGACACACTGATGACATTGTCCAGGTaGAGTTTGCACCACTGTTCAACATCATATGCAAAA +
Preference number: 4 (lower is better)
Translates to: LAPMDTLMTLSR*SLHHCSTSYAK
Trigger: TTTTGCATATGATGTTGAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTCTTTGCTTCTACAGATaGCATCCACTGTATAGTAGC +
Preference number: 4 (lower is better)
Translates to: LLKCSNWVRKIGSLDVNFLCFYR*HPLYSS
Trigger: GCTACTATACAGTGGATGTCATCTGTAGAAGCAAAG...AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CTNQNPDFSCSETVDCVISWSSC*NVAIGS
Trigger: TGACCCAATTGCTACATTTCAGCAACTTGACCAGGA...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GGTCTCAGATCCAACAAAGAGAAGCTCTTGTTCTACAGTTTCTACTGCAGAATTTCCTGGTCAAGTTGCTaGAATGTAGCAATTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GLRSNKEKLLFYSFYCRISWSSC*NVAIGS
Trigger: TGACCCAATTGCTACATTTCAGCAACTTGACCAGGA...AATTCTGCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTTGGATCTGAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTGCATCTAGAATGTTCTaGAGTAGTCGAGAATTGATT +
Preference number: 4 (lower is better)
Translates to: ITGMACIWIGVGIWKPASASRMF*SSRELI
Trigger: AATCAATTCTCGACTACTTCAGAACATTCTAGATGC...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTAAGTTCTCGTGTTGGTaGTATAATCAGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LLKCSNWVRKIGSLDVNFKFSCW*YNQGSE
Trigger: TTCAGAGCCCTGATTATATCACCAACACGAGAACTT...AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGTTTATTAACTCTCTGTaGATCTGGCTGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILFINSL*IWLASS
Trigger: AGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAA...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp CTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGTTTATTAACTCTCTGTaGATCTGGCTGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LKCSNWVRKIGSLDVNFVFINSL*IWLASS
Trigger: AGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAA...CACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTTTCAAACAGTTTATCTaGTTCGTCTACTACAAGCCA +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSFKQFI*FVYYKP
Trigger: TGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAA...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp CTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGAGATTTTTCCTGCTCTaGAACTGTGGACTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: LKCSNWVRKIGSLDVNFVRFFLL*NCGLCY
Trigger: ATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCT...CACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGGTGGATATATTCCACTaGGCTAGTTGGAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: LKCSNWVRKIGSLDVNFVVDIFH*ASWKVI
Trigger: TATGACTTTCCAACTAGCTCAGTGGAATATATCCAC...CACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGGTGGATATATTCCACTaGGCTAGTTGGAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILVDIFH*ASWKVI
Trigger: TATGACTTTCCAACTAGCTCAGTGGAATATATCCAC...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCACACAGCACTAAGAAGTaGGCATATGTGCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: KPFMYSGTGHPACCITLAHSTKK*AYVQGI
Trigger: TATTCCCTGCACATATGCTCACTTCTTAGTGCTGTG...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
CDS-3UTR TCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGCCAGTCTTACGTATATaGAGTCACTTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLPVLRI*SHFFIP
Trigger: TGGAATGAAAAAGTGACTTCATATACGTAAGACTGG...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTGATGTCGGCCTTCCATaGCATCCCCAATCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSDVGLP*HPQSGL
Trigger: TAACCCAGATTGGGGATGTCATGGAAGGCCGACATC...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAGATGTCGGCCTTCCATaGCATCCCCAATCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEDVGLP*HPQSGL
Trigger: TAACCCAGATTGGGGATGTCATGGAAGGCCGACATC...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAATATCTGGAATCGAGCTaGGTCTGCCGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEYLESS*VCREAS
Trigger: AGACGCTTCTCGGCAGACGCAGCTCGATTCCAGATA...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGGCGGGTTGTTTCAGCTaGATTAAAATAGGAATGCTA +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILAGCFS*IKIGML
Trigger: TAGCATTCCTATTTTAATGCAGCTGAAACAACCCGC...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp CATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCAGTGAAAAATGTAATTaGTTTTCCCTTATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: HNWDGLHLDWRRHLETCISEKCN*FSLIPC
Trigger: GCAGGGAATAAGGGAAAAGCAATTACATTTTTCACT...GATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAAATTTCTGTTCCAGATaGCTCTCCACAGCATTCATC +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKNFCSR*LSTAFI
Trigger: GATGAATGCTGTGGAGAGGCATCTGGAACAGAAATT...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TCGAGAATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: SRIDFIFLVKLLKCSNWVGMACI*IGVGIW
Trigger: CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC...GACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTTTTTCCAGATCCAGTTaGAGCAGAAGCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLAFSRSS*SRSQKF
Trigger: GAACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAA...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGCTCTGTGAATCTGGCTaGCAAGTTCTCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKLCESG*QVLVLV
Trigger: CACCAACACGAGAACTTGCCAGCCAGATTCACAGAG...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAGTTCGACCTATCCTGTaGATATATTCCACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLVRPIL*IYSTEL
Trigger: TAGCTCAGTGGAATATATCCACAGGATAGGTCGAAC...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAACCACAAAGTGAGCAGTaGAAGGGGTATTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKPQSEQ*KGYLMS
Trigger: TGACATTAAATACCCCTTCCACTGCTCACTTTGTGG...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTCCACAAAGTGAGCAGTaGAAGGGGTATTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: LLKCSNWVRKIGSLDVNFPQSEQ*KGYLMS
Trigger: TGACATTAAATACCCCTTCCACTGCTCACTTTGTGG...AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp TTAACTTTTGTCTTCAAGAGCTACTTTCTTCTTGCTGTTCTGACCAGTGACCTTGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LTFVFKSYFLLAVLTSDLGLSLL*FTTQKA
Trigger: GGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCC...AAGGTCACTGGTCAGAACAGCAAGAAGAAAGTAGCTCTTGAAGACAAAAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGACCTCAGTTTGTCCTaGAATCCTTTTTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKDLSLS*NPFCSS
Trigger: AGAGGAACAAAAAGGATTCCAGGACAAACTGAGGTC...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTATACGGTGGGTACACTaGTGTTCTTTTATTGTTACT +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSIRWVH*CSFIVT
Trigger: AGTAACAATAAAAGAACACCAGTGTACCCACCGTAT...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGCTTCTGATGTGTTTGTaGTGCTCCACACACACCTGG +
Preference number: 4 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLLLMCL*CSTHTW
Trigger: CCAGGTGTGTGTGGAGCATCACAAACACATCAGAAG...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp TTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACCTTTGCTTCTACAGATaGCATCCACTGTATAGTAGC +
Preference number: 4 (lower is better)
Translates to: FLKTFYVFWYRTPSLLYNLCFYR*HPLYSS
Trigger: GCTACTATACAGTGGATGTCATCTGTAGAAGCAAAG...GTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTGCATCTAGAATGTTCTaGAGTAGTCGAGAATTGATT +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPASRMF*SSRELI
Trigger: AATCAATTCTCGACTACTTCAGAACATTCTAGATGC...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTGCATCTAGAATGTTCTaGAGTAGTCGAGAATTGATT +
Preference number: 4 (lower is better)
Translates to: SIPLASKAVQIRTQIFPAASRMF*SSRELI
Trigger: AATCAATTCTCGACTACTTCAGAACATTCTAGATGC...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTTTTATTAACTCTCTGTaGATCTGGCTGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLKCSNWVRKIGSLDVNFFINSL*IWLASS
Trigger: AGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAA...AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGAAGCCAGCTGGTCTCTaGACCCAGTTTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLKPAGL*TQFCHL
Trigger: AAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTT...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp TTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTTTGGAAAGTCATAGTTaGTCACCAAGTTCACACCTT +
Preference number: 4 (lower is better)
Translates to: LLKCSNWVRKIGSLDVNFLESHS*SPSSHL
Trigger: AAGGTGTGAACTTGGTGATCAACTATGACTTTCCAA...AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGTGGATATATTCCACTaGGCTAGTTGGAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKVDIFH*ASWKVI
Trigger: TATGACTTTCCAACTAGCTCAGTGGAATATATCCAC...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGTCAAGGCTTTATTTTaGATTTCTGTTCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKVKALF*ISVPDA
Trigger: GGCATCTGGAACAGAAATTCAAAATAAAGCCTTGAC...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAGTCAAGGCTTTATTTTaGATTTCTGTTCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLVKALF*ISVPDA
Trigger: GGCATCTGGAACAGAAATTCAAAATAAAGCCTTGAC...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAGATCTACTTATTAAATaGGGCACCATCAACCTAAGG +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLDLLIK*GTINLR
Trigger: CCTTAGGTTGATGGTGCCTCATTTAATAAGTAGATC...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGCCAGTCTTACGTATATaGAGTCACTTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILPVLRI*SHFFIP
Trigger: TGGAATGAAAAAGTGACTTCATATACGTAAGACTGG...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp ATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: IDFIFLVKLLKCSNWVRKITGMA*IWIGVG
Trigger: GCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT...CTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp ATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGCTTGGCTGCCACTGCTaGTTTGTGGATCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: IDFIFLVKLLKCSNWVRKLGCHC*FVDHVY
Trigger: ATACACATGATCCACAAAGCAGCAGTGGCAGCCAAG...CTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TCGAGAATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCTTTCTTGGCTGCCACTaGTGCTTTGTGGATCATGTG +
Preference number: 4 (lower is better)
Translates to: SRIDFIFLVKLLKCSNWVFLGCH*CFVDHV
Trigger: CACATGATCCACAAAGCAGCAGTGGCAGCCAAGAAA...GACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGCTGTTCAACATCATATaGAAAAGTTGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: LASSRVGDIIRALKPLFALFNII*KSCTEH
Trigger: ATGTTCAGTGCAACTTTTGCATATGATGTTGAACAG...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGCTGTTCAACATCATATaGAAAAGTTGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQLFNII*KSCTEH
Trigger: ATGTTCAGTGCAACTTTTGCATATGATGTTGAACAG...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTACTGTTCAACATCATATaGAAAAGTTGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: IWLASSRVGDIIRALKPLLFNII*KSCTEH
Trigger: ATGTTCAGTGCAACTTTTGCATATGATGTTGAACAG...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGTTTATTCCGTTCTACAGTTTCTACTaGAGAATTCCTTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SNWVRKIGSLDVNFVFIPFYSFY*RIPCSN
Trigger: ATTGGAGCAAGGAATTCTGCAGTAGAAACTGTAGAA...CGGAATAAACACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTTTGTTGTGTTCTCTCTaGATGAATAACATCCACATT +
Preference number: 4 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSLLCSL*MNNIHI
Trigger: AATGTGGATGTTATTCATGCAGAGAGAACACAACAA...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGTTGGTTCTGCCATCCTaGCACCTTACAGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKLVLPS*HLTVLL
Trigger: CAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAA...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGACTCTTGTTTGGTTCTaGCATCCTGCCACCTTACAG +
Preference number: 4 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKTLVWF*HPATLQ
Trigger: CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGT...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAATGCTCCACACACACCTaGGACAGACTTCTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHECSTHT*DRLLVS
Trigger: GGAAACAAGAAGTCTGTCCCAGGTGTGTGTGGAGCA...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCAATTGGCGTAGGCATTTaGAAACCTGCATCTAGAATG +
Preference number: 4 (lower is better)
Translates to: KPFMYSGTGHPACCITLAIGVGI*KPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAAT...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCATTGGCGTAGGCATTTaGAAACCTGCATCTAGAATG +
Preference number: 4 (lower is better)
Translates to: CTNQNPDFSCSETVDCVIIGVGI*KPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAAT...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLGMACI*IGVGIW
Trigger: CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGCTCCAGAATATATATTaGGTAAAGGATCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLLQNIY*VKDLFA
Trigger: TGCAAACAGATCCTTTACCCAATATATATTCTGGAG...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAATGAGCCACTACGCCTaGCCAAGAAAAATATTTTCA +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKMSHYA*PRKIFS
Trigger: TGAAAATATTTTTCTTGGCCAGGCGTAGTGGCTCAT...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGCTCTTCTTTGCCTATTaGTTTTTACATTTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLLFFAY*FLHLQD
Trigger: ATCCTGCAAATGTAAAAACCAATAGGCAAAGAAGAG...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGCTTAGGAGTTACAATTaGCATCTTACAGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLLRSYN*HLTDEK
Trigger: TTTCTCATCTGTAAGATGCCAATTGTAACTCCTAAG...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGTTAGGCACAAACCACTaGTCAGGAACTGTACACGCA +
Preference number: 4 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKLGTNH*SGTVHA
Trigger: TGCGTGTACAGTTCCTGACCAGTGGTTTGTGCCTAA...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTTCGGTAGCTTCATGTTaGCACCTATCACAGACGCTG +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSSVASC*HLSQTL
Trigger: CAGCGTCTGTGATAGGTGCCAACATGAAGCTACCGA...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGTCTCCCCTCTTTCTCTaGAACTCGGTAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKSPLFL*NSVASC
Trigger: ACATGAAGCTACCGAGTTCCAGAGAAAGAGGGGAGA...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGCCATTTTGGGGCTTCTaGTGTGTTTGTGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKPFWGF*CVCDAP
Trigger: TGGAGCATCACAAACACATCAGAAGCCCCAAAATGG...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTAGTTCATCATTCACCTaGAGTCATCGTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLASSSFT*SHRLPF
Trigger: AAAAGGAAGACGATGACTTCAGGTGAATGATGAACT...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
CDS-3UTR TCA 90 bp TTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTTTCAAACAGTTTATCTaGTTCGTCTACTACAAGCCA +
Preference number: 4 (lower is better)
Translates to: LLKCSNWVRKIGSLDVNFFKQFI*FVYYKP
Trigger: TGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAA...AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GGTCTCAGATCCAACAAAGAGAAGCTCTTGTTCTACAGTTTCTACTGCAGAATTAGATTTTTCCTGCTCTaGAACTGTGGACTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: GLRSNKEKLLFYSFYCRIRFFLL*NCGLCY
Trigger: ATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCT...AATTCTGCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTTGGATCTGAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GGTCTCAGATCCAACAAAGAGAAGCTCTTGTTCTACAGTTTCTACTGCAGAATTTTGGAAAGTCATAGTTaGTCACCAAGTTCACACCTT +
Preference number: 4 (lower is better)
Translates to: GLRSNKEKLLFYSFYCRILESHS*SPSSHL
Trigger: AAGGTGTGAACTTGGTGATCAACTATGACTTTCCAA...AATTCTGCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTTGGATCTGAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTTTGGAAAGTCATAGTTaGTCACCAAGTTCACACCTT +
Preference number: 4 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLALESHS*SPSSHL
Trigger: AAGGTGTGAACTTGGTGATCAACTATGACTTTCCAA...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTCTACCATCCACAAAGTaGGCAGTGGAAGGGGTATTT +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSLPSTK*AVEGVF
Trigger: AAATACCCCTTCCACTGCTCACTTTGTGGATGGTAG...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp TTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTCCAGTCTTACGTATATaGAGTCACTTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: LLKCSNWVRKIGSLDVNFPVLRI*SHFFIP
Trigger: TGGAATGAAAAAGTGACTTCATATACGTAAGACTGG...AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAACTTGGCTGCCACTGCTaGTTTGTGGATCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHELGCHC*FVDHVY
Trigger: ATACACATGATCCACAAAGCAGCAGTGGCAGCCAAG...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGTTTCTTGGCTGCCACTaGTGCTTTGTGGATCATGTG +
Preference number: 4 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKFLGCH*CFVDHV
Trigger: CACATGATCCACAAAGCAGCAGTGGCAGCCAAGAAA...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAATCATATGCAAAAGTTaGACTGAACATAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKIICKS*TEHSSS
Trigger: CGAAGAGCTATGTTCAGTGCAACTTTTGCATATGAT...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp CTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGTTGTTGTGTTCTCTCTaGATGAATAACATCCACATT +
Preference number: 4 (lower is better)
Translates to: LKCSNWVRKIGSLDVNFVLLCSL*MNNIHI
Trigger: AATGTGGATGTTATTCATGCAGAGAGAACACAACAA...CACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTGTTGTGTTCTCTCTaGATGAATAACATCCACATT +
Preference number: 4 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVLLCSL*MNNIHI
Trigger: AATGTGGATGTTATTCATGCAGAGAGAACACAACAA...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAGTGAAAAATGTAATTaGTTTTCCCTTATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPSEKCN*FSLIPC
Trigger: GCAGGGAATAAGGGAAAAGCAATTACATTTTTCACT...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTATTGGTTTTTACATTTaGAGGATTCAACTCAGGATG +
Preference number: 4 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPIGFYI*RIQLRM
Trigger: CATCCTGAGTTGAATCCTGCAAATGTAAAAACCAAT...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTACTCTTGTTTGGTTCTaGCATCCTGCCACCTTACAG +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSTLVWF*HPATLQ
Trigger: CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGT...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGTTCCTTTTTCCTATCTaGAATCGAGCTGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKFLFPI*NRAASA
Trigger: GGCAGACGCAGCTCGATTCCAGATAGGAAAAAGGAA...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGTTTTCCAGATCCAGTTaGAGCAGAAGCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKFSRSS*SRSQKF
Trigger: GAACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAA...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGCCTGCTCTGAAACTGTaGACTGTGTTATCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKPALKL*TVLSLW
Trigger: CCAGAGAGATAACACAGTCCACAGTTTCAGAGCAGG...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
CDS-3UTR CCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAGGCCTCTCTTTGTTGTaGTTCACAACACAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEGLSLL*FTTQKA
Trigger: GGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCC...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CCA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGTCAAAGTCACACAGCTaGCAAATGGGTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLSKSHS*QMGCTS
Trigger: ACTGGTGCAACCCATTTGCCAGCTGTGTGACTTTGA...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAATCAAAGTCACACAGCTaGCAAATGGGTTGCACCAGT +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHESKSHS*QMGCTS
Trigger: ACTGGTGCAACCCATTTGCCAGCTGTGTGACTTTGA...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTTGTACTACTCTTGTTTaGTTCTGCCATCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSCTTLV*FCHPAT
Trigger: GGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACA...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAATGTACTACTCTTGTTTaGTTCTGCCATCCTGCCACC +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHECTTLV*FCHPAT
Trigger: GGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACA...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTTCTCCCCTCTTTCTCTaGAACTCGGTAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSSPLFL*NSVASC
Trigger: ACATGAAGCTACCGAGTTCCAGAGAAAGAGGGGAGA...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAATCTCCCCTCTTTCTCTaGAACTCGGTAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHESPLFL*NSVASC
Trigger: ACATGAAGCTACCGAGTTCCAGAGAAAGAGGGGAGA...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
3UTR CAA 72 bp CACAATAAAGTCAAGGATCATAGATGTGACCTCAGTTaGTCCTGGAATCCTTTTTGTTCCTCTTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: HNKVKDHRCDLS*SWNPFCSSSLP
Trigger: AGGCAAAGAAGAGGAACAAAAAGGATTCCAGGACAAACTGAGGTCACATCTATGATCCTTGACTTTATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR CAA 72 bp AGGATTCAAATCCAGGCCAGTTTGACTCTAAAGTCCTaGCTCATTTCACCAGAGCCAGCTATTCAATTTTTA +
Preference number: 4 (lower is better)
Translates to: RIQIQASLTLKS*LISPEPAIQFL
Trigger: TAAAAATTGAATAGCTGGCTCTGGTGAAATGAGCAAGGACTTTAGAGTCAAACTGGCCTGGATTTGAATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp GGTCTCAGATCCAACAAAGAGAAGCTCTTGTTCTACAGTTTCTACTGCAGAATTGCATCTAGAATGTTCTaGAGTAGTCGAGAATTGATT +
Preference number: 4 (lower is better)
Translates to: GLRSNKEKLLFYSFYCRIASRMF*SSRELI
Trigger: AATCAATTCTCGACTACTTCAGAACATTCTAGATGC...AATTCTGCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTTGGATCTGAGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GGTCTCAGATCCAACAAAGAGAAGCTCTTGTTCTACAGTTTCTACTGCAGAATTCCAGTCTTACGTATATaGAGTCACTTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: GLRSNKEKLLFYSFYCRIPVLRI*SHFFIP
Trigger: TGGAATGAAAAAGTGACTTCATATACGTAAGACTGG...AATTCTGCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTTGGATCTGAGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR GCA 90 bp ATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGTCTGAAGCCTTTATTTaGGGGTTGTTTCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: IDFIFLVKLLKCSNWVRKSEAFI*GLFQLH
Trigger: ATGCAGCTGAAACAACCCGCAAATAAAGGCTTCAGA...CTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GGTCTCAGATCCAACAAAGAGAAGCTCTTGTTCTACAGTTTCTACTGCAGAATTATCATATGCAAAAGTTaGACTGAACATAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: GLRSNKEKLLFYSFYCRIIICKS*TEHSSS
Trigger: CGAAGAGCTATGTTCAGTGCAACTTTTGCATATGAT...AATTCTGCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTTGGATCTGAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCAATCATATGCAAAAGTTaGACTGAACATAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: KPFMYSGTGHPACCITLAIICKS*TEHSSS
Trigger: CGAAGAGCTATGTTCAGTGCAACTTTTGCATATGAT...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTATCATATGCAAAAGTTaGACTGAACATAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLAIICKS*TEHSSS
Trigger: CGAAGAGCTATGTTCAGTGCAACTTTTGCATATGAT...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTTTCTACAGTTTCTACTaGAGAATTCCTTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLAFYSFY*RIPCSN
Trigger: ATTGGAGCAAGGAATTCTGCAGTAGAAACTGTAGAA...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAAGTGAAAAATGTAATTaGTTTTCCCTTATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKSEKCN*FSLIPC
Trigger: GCAGGGAATAAGGGAAAAGCAATTACATTTTTCACT...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAAGTGAAAAATGTAATTaGTTTTCCCTTATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLSEKCN*FSLIPC
Trigger: GCAGGGAATAAGGGAAAAGCAATTACATTTTTCACT...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGCCTGCTCTGAAACTGTaGACTGTGTTATCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLPALKL*TVLSLC
Trigger: ACAGAGAGATAACACAGTCCACAGTTTCAGAGCAGG...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAACTCCAGAATATATATTaGGTAAAGGATCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKLQNIY*VKDLFA
Trigger: TGCAAACAGATCCTTTACCCAATATATATTCTGGAG...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CCA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTACTTAGGAGTTACAATTaGCATCTTACAGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLLRSYN*HLTDEK
Trigger: TTTCTCATCTGTAAGATGCCAATTGTAACTCCTAAG...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
3UTR CAA 72 bp CACCAGTCCCATGTACTTGTAGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGACTTCAAGTATTCCAT +
Preference number: 4 (lower is better)
Translates to: HQSHVLVVDFKC*VQVTVRLQVFH
Trigger: ATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAACTACAAGTACATGGGACTGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAACTTTGCTTCTACAGATaGCATCCACTGTATAGTAGC +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHELCFYR*HPLYSS
Trigger: GCTACTATACAGTGGATGTCATCTGTAGAAGCAAAG...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR TCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTAAGTTCTCGTGTTGGTaGTATAATCAGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSKFSCW*YNQGSE
Trigger: TTCAGAGCCCTGATTATATCACCAACACGAGAACTT...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp GAGAAAATCAAGGTTAGAAACAGTTACTGTCATTTGTCCAGATCATACAGCTACAGATTTTTCCTGCTCTaGAACTGTGGACTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYRFFLL*NCGLCY
Trigger: ATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCT...GTAGCTGTATGATCTGGACAAATGACAGTAACTGTTTCTAACCTTGATTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617633.5
CDS-3UTR TCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTACCTTCCTTCACACTTaGAGGGAAAAGTCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSTFLHT*REKSLR
Trigger: TCTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGT...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGTTGGGAAGCAATTTCTaGAGTCATCGTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKLGSNF*SHRLPF
Trigger: AAAAGGAAGACGATGACTTCAGAAATTGCTTCCCAA...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTTCTGAAGCCTTTATTTaGGGGTTGTTTCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSSEAFI*GLFQLH
Trigger: ATGCAGCTGAAACAACCCGCAAATAAAGGCTTCAGA...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCACTGTTCAACATCATATaGAAAAGTTGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: KPFMYSGTGHPACCITLALFNII*KSCTEH
Trigger: ATGTTCAGTGCAACTTTTGCATATGATGTTGAACAG...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGGCCACACTAGTCATGTaGTACATGATGATGTTTTGG +
Preference number: 4 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLATLVM*YMMMFW
Trigger: CCAAAACATCATCATGTAGCACATGACTAGTGTGGC...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTATTGGCGTAGGCATTTaGAAACCTGCATCTAGAATG +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSIGVGI*KPASRM
Trigger: CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAAT...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAGTTCGACCTATCCTGTaGATATATTCCACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEVRPIL*IYSTEL
Trigger: TAGCTCAGTGGAATATATCCACAGGATAGGTCGAAC...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTCCACAAAGTGAGCAGTaGAAGGGGTATTTAATGTCA +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSPQSEQ*KGYLMS
Trigger: TGACATTAAATACCCCTTCCACTGCTCACTTTGTGG...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTTTTATTAACTCTCTGTaGATCTGGCTGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSFINSL*IWLASS
Trigger: AGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAA...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR TCA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGTTTATTAACTCTCTGTaGATCTGGCTGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKFINSL*IWLASS
Trigger: AGAACTTGCCAGCCAGATTCACAGAGAGTTAATAAA...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR TCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGTTCAAACAGTTTATCTaGTTCGTCTACTACAAGCCA +
Preference number: 4 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKFKQFI*FVYYKP
Trigger: TGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAA...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTATGAGCCACTACGCCTaGCCAAGAAAAATATTTTCA +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSMSHYA*PRKIFS
Trigger: TGAAAATATTTTTCTTGGCCAGGCGTAGTGGCTCAT...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR TCA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAACCAGTCTTACGTATATaGAGTCACTTTTTCATTCCA +
Preference number: 4 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEPVLRI*SHFFIP
Trigger: TGGAATGAAAAAGTGACTTCATATACGTAAGACTGG...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTATCATATGCAAAAGTTaGACTGAACATAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSIICKS*TEHSSS
Trigger: CGAAGAGCTATGTTCAGTGCAACTTTTGCATATGAT...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR GCA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGCTGTTCAACATCATATaGAAAAGTTGCACTGAACAT +
Preference number: 4 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKLFNII*KSCTEH
Trigger: ATGTTCAGTGCAACTTTTGCATATGATGTTGAACAG...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
3UTR CAA 72 bp ACAGAAAATGAAGAAAGGGAGAAGCTGATCATGATCTaGTACAACATTATGACAGCACTAAGGTATTACGTA +
Preference number: 4 (lower is better)
Translates to: TENEEREKLIMI*YNIMTALRYYV
Trigger: TACGTAATACCTTAGTGCTGTCATAATGTTGTACAAGATCATGATCAGCTTCTCCCTTTCTTCATTTTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
3UTR CAA 72 bp TTTAAACTATACGGTGGGTACACTGGTGTTCTTTTATaGTTACTCTTTACACACAAAGAACAGATAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FKLYGGYTGVLL*LLFTHKEQIGP
Trigger: AGGACCTATCTGTTCTTTGTGTGTAAAGAGTAACAATAAAAGAACACCAGTGTACCCACCGTATAGTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR GCA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGTTGTTGTGTTCTCTCTaGATGAATAACATCCACATT +
Preference number: 4 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKLLCSL*MNNIHI
Trigger: AATGTGGATGTTATTCATGCAGAGAGAACACAACAA...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR GCA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGAGTGAAAAATGTAATTaGTTTTCCCTTATTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKSEKCN*FSLIPC
Trigger: GCAGGGAATAAGGGAAAAGCAATTACATTTTTCACT...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS CCA 90 bp TCTGGAATCGAGCTGCGTCTGCCGAGAAGCGTCTCGTGTCGAATTTaGCCCCCGCGCCGAGCCGGCGAAAGAGATCGTGGACGTCCATCT +
Preference number: 5 (lower is better)
Translates to: SGIELRLPRSVSCRI*PPRRAGERDRGRPS
Trigger: AGATGGACGTCCACGATCTCTTTCGCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGACGCTTCTCGGCAGACGCAGCTCGATTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS CCA 90 bp CTCGTGTCGAATTTGGCCCCCGCGCCGAGCCGGCGAAAGAGATCGTaGACGTCCATCTTTACCCAGAAAGCGCCACAGTTCTACGGCGCC +
Preference number: 5 (lower is better)
Translates to: LVSNLAPAPSRRKRS*TSIFTQKAPQFYGA
Trigger: GGCGCCGTAGAACTGTGGCGCTTTCTGGGTAAAGATGGACGTCCACGATCTCTTTCGCCGGCTCGGCGCGGGGGCCAAATTCGACACGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615769.2
CDS-3UTR CAA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGCGTCTCGTGTCGAATTaGGCCCCCGCGCCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: RPCSITGMACIWIGVGIWRLVSN*APAPSR
Trigger: CCGGCTCGGCGCGGGGGCCAAATTCGACACGAGACG...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCACGTCTCGTGTCGAATTaGGCCCCCGCGCCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: PATKEASLCCGSQHKRPSRLVSN*APAPSR
Trigger: CCGGCTCGGCGCGGGGGCCAAATTCGACACGAGACG...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCTGGGATGGCTTGCATTaGGATTGGCGTAGGCATTTG +
Preference number: 5 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSWDGLH*DWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCA...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp CTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTATTTGCGCGTCTCGTGTCGAATTaGGCCCCCGCGCCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LASSRVGDIIRALKPLFARLVSN*APAPSR
Trigger: CCGGCTCGGCGCGGGGGCCAAATTCGACACGAGACG...CGCAAATAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTGAGCCAAATCCAGGCCAGTTaGACTCTAAAGTCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: LLGSSYAPTSASKCQGVSQIQAS*TLKSLL
Trigger: GAGCAAGGACTTTAGAGTCAAACTGGCCTGGATTTG...GCTCACACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGCGTCTCGTGTCGAATTaGGCCCCCGCGCCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILRLVSN*APAPSR
Trigger: CCGGCTCGGCGCGGGGGCCAAATTCGACACGAGACG...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTCAGCTGGCAAATGGGTaGCACCAGTATACCTACCTC +
Preference number: 5 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGQLANG*HQYTYL
Trigger: GAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTG...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp AAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCAAGCCACTCAACACTaGCTAGGTCGATTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: KFPTMQHNWDGLHLDWRRQATQH*LGRFRG
Trigger: CCCCCGGAATCGACCTAGCAAGTGTTGAGTGGCTTG...CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATCAAGCCACTCAACACTaGCTAGGTCGATTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: RSQKFPTMQHNWDGLHLDQATQH*LGRFRG
Trigger: CCCCCGGAATCGACCTAGCAAGTGTTGAGTGGCTTG...ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAAAATAGCTCTTCGGACCTaGTGGGATGTGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GQENGSQLVSEPSFAIFKIALRT*WDVQAR
Trigger: CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTAT...TTTGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAATGCAAGCCACTCAACACTaGCTAGGTCGATTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GMACIWIGVGIWKPASRMQATQH*LGRFRG
Trigger: CCCCCGGAATCGACCTAGCAAGTGTTGAGTGGCTTG...CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACCAAGCCACTCAACACTaGCTAGGTCGATTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDQATQH*LGRFRG
Trigger: CCCCCGGAATCGACCTAGCAAGTGTTGAGTGGCTTG...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCATAGCTCTTCGGACCTaGTGGGATGTGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: HNWDGLHLDWRRHLETCIIALRT*WDVQAR
Trigger: CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTAT...GATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTAGGAAGATCGGTTCCTaGGACGTGAATTTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGRKIGS*DVNFVF
Trigger: AAACACAAAATTCACGTCCAAGGAACCGATCTTCCT...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTGGGATGGCTTGCATTaGGATTGGCGTAGGCATTTG +
Preference number: 5 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHWDGLH*DWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCA...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGTGGGATGGCTTGCATTaGGATTGGCGTAGGCATTTG +
Preference number: 5 (lower is better)
Translates to: RPCSITGMACIWIGVGIWWDGLH*DWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCA...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGTGGGATGGCTTGCATTaGGATTGGCGTAGGCATTTG +
Preference number: 5 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLWDGLH*DWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCA...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TCCAGATCCAGTTGGAGCAGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGTTAGGTCCAAATTTCTaGGCTGCCACTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: SRSSWSRSQKFPTMQHNWLGPNF*AATAAL
Trigger: CAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAA...CCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCTCCAACTGGATCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTAGGTTTGAGGATCACTaGAGTCTAAGAGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSRFEDH*SLRGQG
Trigger: GCCTTGACCTCTTAGACTCAAGTGATCCTCAAACCT...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTGTCCTGGAATCCTTTTaGTTCCTCTTCTTTGCCTAT +
Preference number: 5 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGVLESF*FLFFAY
Trigger: ATAGGCAAAGAAGAGGAACAAAAAGGATTCCAGGAC...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTCGTCTCGTGTCGAATTaGGCCCCCGCGCCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSRLVSN*APAPSR
Trigger: CCGGCTCGGCGCGGGGGCCAAATTCGACACGAGACG...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp AGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATCATAACTGGGATGGCTaGCATTTGGATTGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: RSQKFPTMQHNWDGLHLDHNWDG*HLDWRR
Trigger: CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG...ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGTTAGGTCCAAATTTCTaGGCTGCCACTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLLGPNF*AATAAL
Trigger: CAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAA...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACACAAGCCACTCAACACTaGCTAGGTCGATTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTQATQH*LGRFRG
Trigger: CCCCCGGAATCGACCTAGCAAGTGTTGAGTGGCTTG...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp CATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCGCTAAGGCAGGAGGATaGTGTGAGGTCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: HNWDGLHLDWRRHLETCIAKAGG*CEVRSS
Trigger: TGAACTCCTGACCTCACACAATCCTCCTGCCTTAGC...GATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp TTCAAACTGCTAGGCTCAAGCTATGCTCCCACCTCGGCCTCCAAGTGCCAGGGTCCTCCAGAATATATATaGGGTAAAGGATCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: FKLLGSSYAPTSASKCQGPPEYI*GKGSVC
Trigger: GCAAACAGATCCTTTACCCAATATATATTCTGGAGG...ACCCTGGCACTTGGAGGCCGAGGTGGGAGCATAGCTTGAGCCTAGCAGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAATGTGGGATGGCTTGCATTaGGATTGGCGTAGGCATTTG +
Preference number: 5 (lower is better)
Translates to: GMACIWIGVGIWKPASRMWDGLH*DWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCA...CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp ACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGACATAACTGGGATGGCTaGCATTTGGATTGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: TGMACIWIGVGIWKPASRHNWDG*HLDWRR
Trigger: CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG...TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGTTTTTCCAGATCCAGTaGGAGCAGAAGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: SQKFPTMQHNWDGLHLDWFFQIQ*EQKPEV
Trigger: AACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAA...CCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGTTTTTCCAGATCCAGTaGGAGCAGAAGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: KFPTMQHNWDGLHLDWRRFFQIQ*EQKPEV
Trigger: AACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAA...CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTTAGGTCCAAATTTCTaGGCTGCCACTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: RSQKFPTMQHNWDGLHLDLGPNF*AATAAL
Trigger: CAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAA...ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAATAGCTCTTCGGACCTaGTGGGATGTGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLIALRT*WDVQAR
Trigger: CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTAT...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGGCTAAGGCAGGAGGATaGTGTGAGGTCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQAKAGG*CEVRSS
Trigger: TGAACTCCTGACCTCACACAATCCTCCTGCCTTAGC...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTAGCTAAGGCAGGAGGATaGTGTGAGGTCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: IWLASSRVGDIIRALKPLAKAGG*CEVRSS
Trigger: TGAACTCCTGACCTCACACAATCCTCCTGCCTTAGC...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGCAGCTGGCAAATGGGTaGCACCAGTATACCTACCTC +
Preference number: 5 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLQLANG*HQYTYL
Trigger: GAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTG...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCTCGGTAGCTTCATGTaGGCACCTATCACAGACGCT +
Preference number: 5 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSLGSFM*APITDA
Trigger: AGCGTCTGTGATAGGTGCCAACATGAAGCTACCGAG...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGCTCGGTAGCTTCATGTaGGCACCTATCACAGACGCT +
Preference number: 5 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQLGSFM*APITDA
Trigger: AGCGTCTGTGATAGGTGCCAACATGAAGCTACCGAG...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTGGGATGGCTTGCATTaGGATTGGCGTAGGCATTTG +
Preference number: 5 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQWDGLH*DWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCA...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp ACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGATTAGGTCCAAATTTCTaGGCTGCCACTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: TGMACIWIGVGIWKPASRLGPNF*AATAAL
Trigger: CAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAA...TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCTCTCTGAACCCAGTTTaGCCATCTTCAAACAGTTTA +
Preference number: 5 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTSLNPV*PSSNSL
Trigger: TAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGA...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTTCTCTGAACCCAGTTTaGCCATCTTCAAACAGTTTA +
Preference number: 5 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSSLNPV*PSSNSL
Trigger: TAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGA...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGTGTGTTATCTCTCTGTaGTTGTGTTCTCTCTGCATG +
Preference number: 5 (lower is better)
Translates to: RPCSITGMACIWIGVGIWCVISL*LCSLCM
Trigger: CATGCAGAGAGAACACAACAACAGAGAGATAACACA...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp AGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATCACCTTCCTTCACACTaGAAGGGAAAAGTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: RSQKFPTMQHNWDGLHLDHLPSH*KGKVLK
Trigger: CTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTG...ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp AAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAA +
Preference number: 5 (lower is better)
Translates to: KFPTMQHNWDGLHLDWRRKRGLS*LWFTTQ
Trigger: TTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTT...CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGCAGCTGGCAAATGGGTaGCACCAGTATACCTACCTC +
Preference number: 5 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILQLANG*HQYTYL
Trigger: GAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTG...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTTTGTTTTTCCTATTCTaGCAGGCAAGTGCAAAACAG +
Preference number: 5 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSLFFLF*QASAKQ
Trigger: CTGTTTTGCACTTGCCTGCAAGAATAGGAAAAACAA...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTGTGTACTACTCTTGTTaGGTTCTGCCATCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSVYYSC*VLPSCH
Trigger: GTGGCAGGATGGCAGAACCAAACAAGAGTAGTACAC...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGGTGTACTACTCTTGTTaGGTTCTGCCATCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQVYYSC*VLPSCH
Trigger: GTGGCAGGATGGCAGAACCAAACAAGAGTAGTACAC...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTCAAGGTGTACTACTCTaGTTTGGTTCTGCCATCCTG +
Preference number: 5 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLQGVLL*FGSAIL
Trigger: CAGGATGGCAGAACCAAACAAGAGTAGTACACCTTG...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGCTCGGTAGCTTCATGTaGGCACCTATCACAGACGCT +
Preference number: 5 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILLGSFM*APITDA
Trigger: AGCGTCTGTGATAGGTGCCAACATGAAGCTACCGAG...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp CCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGAGTAGCACCTTCTTCTaGGGAAGCAATTTCGTTTTA +
Preference number: 5 (lower is better)
Translates to: PTMQHNWDGLHLDWRRHLSSTFF*GSNFVL
Trigger: TAAAACGAAATTGCTTCCCAAGAAGAAGGTGCTACT...CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
CDS-3UTR CAA 90 bp CTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGCATAACTGGGATGGCTaGCATTTGGATTGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: LKCSNWVRKIGSLDVNFVHNWDG*HLDWRR
Trigger: CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG...CACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGCATAACTGGGATGGCTaGCATTTGGATTGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILHNWDG*HLDWRR
Trigger: CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGCATAACTGGGATGGCTaGCATTTGGATTGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVHNWDG*HLDWRR
Trigger: CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TGCTCCAATGGACACACTGATGACATTGTCCAGGTTGAGTTTGCACCACTGTTCTTTTTCCAGATCCAGTaGGAGCAGAAGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: CSNGHTDDIVQVEFAPLFFFQIQ*EQKPEV
Trigger: AACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAA...GAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACTTTTTCCAGATCCAGTaGGAGCAGAAGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDFFQIQ*EQKPEV
Trigger: AACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAA...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTTTAGGTCCAAATTTCTaGGCTGCCACTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSLGPNF*AATAAL
Trigger: CAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAA...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTTTAGGTCCAAATTTCTaGGCTGCCACTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: ITGMACIWIGVGIWKPASLGPNF*AATAAL
Trigger: CAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAA...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TGCTCCAATGGACACACTGATGACATTGTCCAGGTTGAGTTTGCACCACTGTTCTTGTCCAGGTTGAGTTaGCACCACTGTTCAACATCA +
Preference number: 5 (lower is better)
Translates to: CSNGHTDDIVQVEFAPLFLSRLS*HHCSTS
Trigger: TGATGTTGAACAGTGGTGCAAACTCAACCTGGACAA...GAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp ATCTGGCTGGCAAGTTCTCGTGTTGGTGATATAATCAGGGCTCTGAAGCCTTTAGACACACTGATGACATaGTCCAGGTTGAGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: IWLASSRVGDIIRALKPLDTLMT*SRLSLH
Trigger: GTGCAAACTCAACCTGGACAATGTCATCAGTGTGTC...TAAAGGCTTCAGAGCCCTGATTATATCACCAACACGAGAACTTGCCAGCCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATAACAAAGAGAAGCTCTaGTTCTACAGTTTCTACTGC +
Preference number: 5 (lower is better)
Translates to: FPTMQHNWDGLHLDWRRHNKEKL*FYSFYC
Trigger: GCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTT...ATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 5 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp CAATGGTGGGATGAGAAGTGGGGGTGGAAGACAGTGAGACTGATGATCCTGACCTGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 5 (lower is better)
Translates to: QWWDEKWGWKTVRLMILTCQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...GGTCAGGATCATCAGTCTCACTGTCTTCCACCCCCACTTCTCATCCCACCATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGCTACATGATGATGTTTaGGTCAGCCACAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQLHDDV*VSHRQQ
Trigger: CTGCTGTCTGTGGCTGACCAAAACATCATCATGTAG...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGCTACATGATGATGTTTaGGTCAGCCACAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLLHDDV*VSHRQQ
Trigger: CTGCTGTCTGTGGCTGACCAAAACATCATCATGTAG...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GGGCCCTTTGATAGTCTCGCAGCACTGATGAGTGATCAGCTCTCCCCTCTTTCTAAGCACGTAGTTTGCTaGCTAACAAGTAATGGATTA +
Preference number: 5 (lower is better)
Translates to: GPFDSLAALMSDQLSPLSKHVVC*LTSNGL
Trigger: TAATCCATTACTTGTTAGCAAGCAAACTACGTGCTT...AGAAAGAGGGGAGAGCTGATCACTCATCAGTGCTGCGAGACTATCAAAGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCAAGGTGTACTACTCTaGTTTGGTTCTGCCATCCTG +
Preference number: 5 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSQGVLL*FGSAIL
Trigger: CAGGATGGCAGAACCAAACAAGAGTAGTACACCTTG...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTAGGAAGATCGGTTCCTaGGACGTGAATTTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLRKIGS*DVNFVF
Trigger: AAACACAAAATTCACGTCCAAGGAACCGATCTTCCT...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACAGGAAGATCGGTTCCTaGGACGTGAATTTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDRKIGS*DVNFVF
Trigger: AAACACAAAATTCACGTCCAAGGAACCGATCTTCCT...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTTGGGATGGCTTGCATTaGGATTGGCGTAGGCATTTG +
Preference number: 5 (lower is better)
Translates to: LLKCSNWVRKIGSLDVNFWDGLH*DWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCA...AAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTACATAACTGGGATGGCTaGCATTTGGATTGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: YSCLVLPSCHLTVLLFFLHNWDG*HLDWRR
Trigger: CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG...TAGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp CACACAGCTGGCAAATGGGTTGCACCAGTATACCTACCTCCAGAATATATATTGTTAGGTCCAAATTTCTaGGCTGCCACTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: HTAGKWVAPVYLPPEYILLGPNF*AATAAL
Trigger: CAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAA...CAATATATATTCTGGAGGTAGGTATACTGGTGCAACCCATTTGCCAGCTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGCAAGCCACTCAACACTaGCTAGGTCGATTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKQATQH*LGRFRG
Trigger: CCCCCGGAATCGACCTAGCAAGTGTTGAGTGGCTTG...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp TCGAGAATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCATAGCTCTTCGGACCTaGTGGGATGTGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SRIDFIFLVKLLKCSNWVIALRT*WDVQAR
Trigger: CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTAT...GACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTTTGTCCAGGTTGAGTTaGCACCACTGTTCAACATCA +
Preference number: 5 (lower is better)
Translates to: RCLSTAFITPSFTLEGKSLSRLS*HHCSTS
Trigger: TGATGTTGAACAGTGGTGCAAACTCAACCTGGACAA...ACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTATGACATTGTCCAGGTaGAGTTTGCACCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: ITGMACIWIGVGIWKPASMTLSR*SLHHCS
Trigger: TGAACAGTGGTGCAAACTCAACCTGGACAATGTCAT...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGATGACATTGTCCAGGTaGAGTTTGCACCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRMTLSR*SLHHCS
Trigger: TGAACAGTGGTGCAAACTCAACCTGGACAATGTCAT...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CAGGCCAGGAAAATGGAAGCCAGCTGGTCTCTGAACCCAGTTTTGCCATCTTCAACAAGAACAGGTGGATaGAAACCCTTTTTAACAAGT +
Preference number: 5 (lower is better)
Translates to: QARKMEASWSLNPVLPSSTRTGG*KPFLTS
Trigger: ACTTGTTAAAAAGGGTTTCAATCCACCTGTTCTTGT...TGAAGATGGCAAAACTGGGTTCAGAGACCAGCTGGCTTCCATTTTCCTGGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCATGTGTTATCTCTCTGTaGTTGTGTTCTCTCTGCATG +
Preference number: 5 (lower is better)
Translates to: PATKEASLCCGSQHKRPSCVISL*LCSLCM
Trigger: CATGCAGAGAGAACACAACAACAGAGAGATAACACA...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp CGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 5 (lower is better)
Translates to: RPCSITGMACIWIGVGIWVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...CCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAA +
Preference number: 5 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDKRGLS*LWFTTQ
Trigger: TTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTT...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS CCA 90 bp AATGTTACAGGCATTCTAGATCTTCATACTCACATGCAGCATAACTaGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGC +
Preference number: 5 (lower is better)
Translates to: NVTGILDLHTHMQHN*DGLHLDWRRHLETC
Trigger: GCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGTGAGTATGAAGATCTAGAATGCCTGTAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619418.1
ENST00000633791.1
CDS CCA 90 bp AGGGGCAGGGTGAGGACTGAATGGAAAGGGCACAAGAAAATTGTCTaGGGTAATACATATGTTCTCTATCTTCACTGGAATAGTGGTTAC +
Preference number: 5 (lower is better)
Translates to: RGRVRTEWKGHKKIV*GNTYVLYLHWNSGY
Trigger: GTAACCACTATTCCAGTGAAGATAGAGAACATATGTATTACCCCAGACAATTTTCTTGTGCCCTTTCCATTCAGTCCTCACCCTGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619418.1
ENST00000633791.1
CDS CCA 90 bp CGAAAAGACAACTTACCATATTCTGAGAGGCAAGCTTCTGTCCCTTaGGATAAGAGCTGGGACAACACGCTTCTTAACCATTTACTCCTA +
Preference number: 5 (lower is better)
Translates to: RKDNLPYSERQASVP*DKSWDNTLLNHLLL
Trigger: TAGGAGTAAATGGTTAAGAAGCGTGTTGTCCCAGCTCTTATCCCAAGGGACAGAAGCTTGCCTCTCAGAATATGGTAAGTTGTCTTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622140.1
ENST00000631452.1
CDS-3UTR CAA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTTTTTTCCAGATCCAGTaGGAGCAGAAGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPFFQIQ*EQKPEV
Trigger: AACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAA...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTTCTCTGAACCCAGTTTaGCCATCTTCAAACAGTTTA +
Preference number: 5 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLSLNPV*PSSNSL
Trigger: TAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGA...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGATAGCTCTTCGGACCTaGTGGGATGTGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLIALRT*WDVQAR
Trigger: CCTGGCCTGCACATCCCACAAGGTCCGAAGAGCTAT...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTAGACACACTGATGACATaGTCCAGGTTGAGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: VVSENLLCILVQDTQPAVDTLMT*SRLSLH
Trigger: GTGCAAACTCAACCTGGACAATGTCATCAGTGTGTC...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCAACAAAGAGAAGCTCTaGTTCTACAGTTTCTACTGC +
Preference number: 5 (lower is better)
Translates to: HNWDGLHLDWRRHLETCINKEKL*FYSFYC
Trigger: GCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTT...GATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AGAAGCCAGAAGTTCCCGACCATGCAGCATAACTGGGATGGCTTGCATTTGGATACAAGAACAGGTGGATaGAAACCCTTTTTAACAAGT +
Preference number: 5 (lower is better)
Translates to: RSQKFPTMQHNWDGLHLDTRTGG*KPFLTS
Trigger: ACTTGTTAAAAAGGGTTTCAATCCACCTGTTCTTGT...ATCCAAATGCAAGCCATCCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTGTGTTATCTCTCTGTaGTTGTGTTCTCTCTGCATG +
Preference number: 5 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQCVISL*LCSLCM
Trigger: CATGCAGAGAGAACACAACAACAGAGAGATAACACA...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACACACCTTCCTTCACACTaGAAGGGAAAAGTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTHLPSH*KGKVLK
Trigger: CTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTG...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp TCAATCCCTCTTGCTAGCAAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCACCTTCCTTCACACTaGAAGGGAAAAGTCCTTAAG +
Preference number: 5 (lower is better)
Translates to: SIPLASKAVQIRTQIFPAHLPSH*KGKVLK
Trigger: CTTAAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTG...AGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTTGCTAGCAAGAGGGATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAA +
Preference number: 5 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQKRGLS*LWFTTQ
Trigger: TTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTT...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCATTGTTTTTCCTATTCTaGCAGGCAAGTGCAAAACAG +
Preference number: 5 (lower is better)
Translates to: PATKEASLCCGSQHKRPSLFFLF*QASAKQ
Trigger: CTGTTTTGCACTTGCCTGCAAGAATAGGAAAAACAA...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAACAAGGTGTACTACTCTaGTTTGGTTCTGCCATCCTG +
Preference number: 5 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKQGVLL*FGSAIL
Trigger: CAGGATGGCAGAACCAAACAAGAGTAGTACACCTTG...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGAACAGCTACTGTCATTaGTCCAGATCATACAGCTAC +
Preference number: 5 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQNSYCH*SRSYSY
Trigger: GTAGCTGTATGATCTGGACAAATGACAGTAGCTGTT...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615769.2
CDS-3UTR CAA 90 bp TGCTCCAATGGACACACTGATGACATTGTCCAGGTTGAGTTTGCACCACTGTTCTTTTGTCTTCAATCTTaGCTTCTACAGATGACATCC +
Preference number: 5 (lower is better)
Translates to: CSNGHTDDIVQVEFAPLFFCLQS*LLQMTS
Trigger: GGATGTCATCTGTAGAAGCAAAGATTGAAGACAAAA...GAACAGTGGTGCAAACTCAACCTGGACAATGTCATCAGTGTGTCCATTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGGGAAAAGTCCTTTTTTGTCTTCAATCTTaGCTTCTACAGATGACATCC +
Preference number: 5 (lower is better)
Translates to: ASPQHSSHLPSHLKGKVLFCLQS*LLQMTS
Trigger: GGATGTCATCTGTAGAAGCAAAGATTGAAGACAAAA...AAGGACTTTTCCCTTCAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAATTTTTCCAGATCCAGTaGGAGCAGAAGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKFFQIQ*EQKPEV
Trigger: AACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAA...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GGTCTCAGATCCAACAAAGAGAAGCTCTTGTTCTACAGTTTCTACTGCAGAATTTTAGGTCCAAATTTCTaGGCTGCCACTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: GLRSNKEKLLFYSFYCRILGPNF*AATAAL
Trigger: CAAAGCAGCAGTGGCAGCCAAGAAATTTGGACCTAA...AATTCTGCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTTGGATCTGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp ATAACTGGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTTCTCTGAACCCAGTTTaGCCATCTTCAAACAGTTTA +
Preference number: 5 (lower is better)
Translates to: ITGMACIWIGVGIWKPASSLNPV*PSSNSL
Trigger: TAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGA...AGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCAGACACACTGATGACATaGTCCAGGTTGAGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: KPFMYSGTGHPACCITLADTLMT*SRLSLH
Trigger: GTGCAAACTCAACCTGGACAATGTCATCAGTGTGTC...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAACAAAGAGAAGCTCTaGTTCTACAGTTTCTACTGC +
Preference number: 5 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLNKEKL*FYSFYC
Trigger: GCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTT...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGAACAAAGAGAAGCTCTaGTTCTACAGTTTCTACTGC +
Preference number: 5 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRNKEKL*FYSFYC
Trigger: GCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTT...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTTGGACACAAGAACAGGTGGATaGAAACCCTTTTTAACAAGT +
Preference number: 5 (lower is better)
Translates to: LVKLLKCSNWVRKIGSLDTRTGG*KPFLTS
Trigger: ACTTGTTAAAAAGGGTTTCAATCCACCTGTTCTTGT...GTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGGCTAAGGCAGGAGGATaGTGTGAGGTCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKAKAGG*CEVRSS
Trigger: TGAACTCCTGACCTCACACAATCCTCCTGCCTTAGC...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAAGGCCATCATGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 5 (lower is better)
Translates to: PATKEASLCCGSQHKRPSCQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...TGATGGCCTTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GGGATGGCTTGCATTTGGATTGGCGTAGGCATTTGGAAACCTGCATCTAGAATGTGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 5 (lower is better)
Translates to: GMACIWIGVGIWKPASRMCQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...CATTCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAA +
Preference number: 5 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPKRGLS*LWFTTQ
Trigger: TTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTT...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAA +
Preference number: 5 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTKRGLS*LWFTTQ
Trigger: TTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTT...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGCCTCCAGAATATATATaGGGTAAAGGATCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLPPEYI*GKGSVC
Trigger: GCAAACAGATCCTTTACCCAATATATATTCTGGAGG...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGCCTCTTCTTTGCCTATaGGTTTTTACATTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLPLLCL*VFTFAG
Trigger: TCCTGCAAATGTAAAAACCAATAGGCAAAGAAGAGG...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GTTTCTACTGCAGAATTCCTTGCTCCAATGGACACACTGATGACATTGTCCAGGTTTTGTCTTCAATCTTaGCTTCTACAGATGACATCC +
Preference number: 5 (lower is better)
Translates to: VSTAEFLAPMDTLMTLSRFCLQS*LLQMTS
Trigger: GGATGTCATCTGTAGAAGCAAAGATTGAAGACAAAA...CCTGGACAATGTCATCAGTGTGTCCATTGGAGCAAGGAATTCTGCAGTAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp ATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGCATAACTGGGATGGCTaGCATTTGGATTGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: IDFIFLVKLLKCSNWVRKHNWDG*HLDWRR
Trigger: CCTACGCCAATCCAAATGCAAGCCATCCCAGTTATG...CTTCCTGACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCATGACATTGTCCAGGTaGAGTTTGCACCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: CTNQNPDFSCSETVDCVIMTLSR*SLHHCS
Trigger: TGAACAGTGGTGCAAACTCAACCTGGACAATGTCAT...GATAACACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GAGAAAATCAAGGTTAGAAACAGCTACTGTCATTTGTCCAGATCATACAGCTACGACACACTGATGACATaGTCCAGGTTGAGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYDTLMT*SRLSLH
Trigger: GTGCAAACTCAACCTGGACAATGTCATCAGTGTGTC...GTAGCTGTATGATCTGGACAAATGACAGTAGCTGTTTCTAACCTTGATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615769.2
CDS-3UTR CAA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAGCTAAGGCAGGAGGATaGTGTGAGGTCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEAKAGG*CEVRSS
Trigger: TGAACTCCTGACCTCACACAATCCTCCTGCCTTAGC...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CAA 90 bp AAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGAAGCTGATCATGATCTaGTACAACATTATGACAGCA +
Preference number: 5 (lower is better)
Translates to: KTPRCTTLVWFCHPATLQKLIMI*YNIMTA
Trigger: TGCTGTCATAATGTTGTACAAGATCATGATCAGCTT...CTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGAAGCTGATCATGATCTaGTACAACATTATGACAGCA +
Preference number: 5 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLKLIMI*YNIMTA
Trigger: TGCTGTCATAATGTTGTACAAGATCATGATCAGCTT...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CAA 90 bp ATTTCTGTTCCAGATGCCTCTCCACAGCATTCATCACACCTTCCTTCACACTTGTCTACAGCTGTACATTaGCATTTTAGGCTAAGTGTT +
Preference number: 5 (lower is better)
Translates to: ISVPDASPQHSSHLPSHLSTAVH*HFRLSV
Trigger: AACACTTAGCCTAAAATGCAAATGTACAGCTGTAGA...CAAGTGTGAAGGAAGGTGTGATGAATGCTGTGGAGAGGCATCTGGAACAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GAGAAAATCAAGGTTAGAAACAGCTACTGTCATTTGTCCAGATCATACAGCTACCAAATCCAGGCCAGTTaGACTCTAAAGTCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYQIQAS*TLKSLL
Trigger: GAGCAAGGACTTTAGAGTCAAACTGGCCTGGATTTG...GTAGCTGTATGATCTGGACAAATGACAGTAGCTGTTTCTAACCTTGATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615769.2
CDS-3UTR CAA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTTTGTTTTTCCTATTCTaGCAGGCAAGTGCAAAACAG +
Preference number: 5 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPLFFLF*QASAKQ
Trigger: CTGTTTTGCACTTGCCTGCAAGAATAGGAAAAACAA...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAACTCGGTAGCTTCATGTaGGCACCTATCACAGACGCT +
Preference number: 5 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHELGSFM*APITDA
Trigger: AGCGTCTGTGATAGGTGCCAACATGAAGCTACCGAG...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTAAGTAGCACCTTCTTCTaGGGAAGCAATTTCGTTTTA +
Preference number: 5 (lower is better)
Translates to: VVSENLLCILVQDTQPAVSSTFF*GSNFVL
Trigger: TAAAACGAAATTGCTTCCCAAGAAGAAGGTGCTACT...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
CDS-3UTR CAA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACATTTTGTCTTCAATCTTaGCTTCTACAGATGACATCC +
Preference number: 5 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTFCLQS*LLQMTS
Trigger: GGATGTCATCTGTAGAAGCAAAGATTGAAGACAAAA...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAATCTCTGAACCCAGTTTaGCCATCTTCAAACAGTTTA +
Preference number: 5 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKSLNPV*PSSNSL
Trigger: TAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGA...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GATTTTTCCTGCTCTGAAACTGTGGACTGTGTTATCTCTCTGGTTAACAGAATATTGTCCAGGTTGAGTTaGCACCACTGTTCAACATCA +
Preference number: 5 (lower is better)
Translates to: DFSCSETVDCVISLVNRILSRLS*HHCSTS
Trigger: TGATGTTGAACAGTGGTGCAAACTCAACCTGGACAA...TATTCTGTTAACCAGAGAGATAACACAGTCCACAGTTTCAGAGCAGGAAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612255.4
ENST00000633356.1
CDS-3UTR CAA 90 bp GTAGTTTCTGAAAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTAAACAAAGAGAAGCTCTaGTTCTACAGTTTCTACTGC +
Preference number: 5 (lower is better)
Translates to: VVSENLLCILVQDTQPAVNKEKL*FYSFYC
Trigger: GCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTT...TACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTTTCAGAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTACAAGAACAGGTGGATaGAAACCCTTTTTAACAAGT +
Preference number: 5 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPTRTGG*KPFLTS
Trigger: ACTTGTTAAAAAGGGTTTCAATCCACCTGTTCTTGT...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp AAGGCTGTACAAATCAGAACCCAGATTTTTCCTGCTCTGAAACTGTGGACTGTGACAAGAACAGGTGGATaGAAACCCTTTTTAACAAGT +
Preference number: 5 (lower is better)
Translates to: KAVQIRTQIFPALKLWTVTRTGG*KPFLTS
Trigger: ACTTGTTAAAAAGGGTTTCAATCCACCTGTTCTTGT...CACAGTCCACAGTTTCAGAGCAGGAAAAATCTGGGTTCTGATTTGTACAGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp CTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAGTCCTTTTGTTTTTCCTGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 5 (lower is better)
Translates to: LLLFGSAILPPYSPFVFPVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...AGGAAAAACAAAAGGACTGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACAAAGCTGATCATGATCTaGTACAACATTATGACAGCA +
Preference number: 5 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTKLIMI*YNIMTA
Trigger: TGCTGTCATAATGTTGTACAAGATCATGATCAGCTT...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp AGCAATTGGGTCAGGAAGATCGGTTCCTTGGACGTGAATTTTGTGTTTATTCCGAAGCTGATCATGATCTaGTACAACATTATGACAGCA +
Preference number: 5 (lower is better)
Translates to: SNWVRKIGSLDVNFVFIPKLIMI*YNIMTA
Trigger: TGCTGTCATAATGTTGTACAAGATCATGATCAGCTT...CGGAATAAACACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGAGGTTTGAGGATCACTaGAGTCTAAGAGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKRFEDH*SLRGQG
Trigger: GCCTTGACCTCTTAGACTCAAGTGATCCTCAAACCT...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp AAAAACTCCAAGGTGTACTACTCTTGTTTGGTTCTGCCATCCTGCCACCTTACATCTACAGCTGTACATTaGCATTTTAGGCTAAGTGTT +
Preference number: 5 (lower is better)
Translates to: KNSKVYYSCLVLPSCHLTSTAVH*HFRLSV
Trigger: AACACTTAGCCTAAAATGCAAATGTACAGCTGTAGA...TGTAAGGTGGCAGGATGGCAGAACCAAACAAGAGTAGTACACCTTGGAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAGTGTACTACTCTTGTTaGGTTCTGCCATCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEVYYSC*VLPSCH
Trigger: GTGGCAGGATGGCAGAACCAAACAAGAGTAGTACAC...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp TGGAATAACCAGCCACAAAAGAGGCCTCTCTTTGTTGTGGTTCACAACACAAAATTTTGTCTTCAATCTTaGCTTCTACAGATGACATCC +
Preference number: 5 (lower is better)
Translates to: WNNQPQKRPLFVVVHNTKFCLQS*LLQMTS
Trigger: GGATGTCATCTGTAGAAGCAAAGATTGAAGACAAAA...TTTTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTTGTGGCTGGTTATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGTTTTTCCAGATCCAGTaGGAGCAGAAGCCAGAAGTT +
Preference number: 5 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKFFQIQ*EQKPEV
Trigger: AACTTCTGGCTTCTGCTCCAACTGGATCTGGAAAAA...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGTTGTCCAGGTTGAGTTaGCACCACTGTTCAACATCA +
Preference number: 5 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKLSRLS*HHCSTS
Trigger: TGATGTTGAACAGTGGTGCAAACTCAACCTGGACAA...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp TCGAGAATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCTTGTCCAGGTTGAGTTaGCACCACTGTTCAACATCA +
Preference number: 5 (lower is better)
Translates to: SRIDFIFLVKLLKCSNWVLSRLS*HHCSTS
Trigger: TGATGTTGAACAGTGGTGCAAACTCAACCTGGACAA...GACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGATGACATTGTCCAGGTaGAGTTTGCACCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKMTLSR*SLHHCS
Trigger: TGAACAGTGGTGCAAACTCAACCTGGACAATGTCAT...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGGACACACTGATGACATaGTCCAGGTTGAGTTTGCAC +
Preference number: 5 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLDTLMT*SRLSLH
Trigger: GTGCAAACTCAACCTGGACAATGTCATCAGTGTGTC...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGCAAGGTGTACTACTCTaGTTTGGTTCTGCCATCCTG +
Preference number: 5 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLQGVLL*FGSAIL
Trigger: CAGGATGGCAGAACCAAACAAGAGTAGTACACCTTG...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp TCGAGAATTGATTTTATATTCCTGGTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTaGGACGTGAATTTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: SRIDFIFLVKLLKCSNWVRKIGS*DVNFVF
Trigger: AAACACAAAATTCACGTCCAAGGAACCGATCTTCCT...GACCCAATTGCTACATTTCAGCAACTTGACCAGGAATATAAAATCAATTCTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGTTGTCCAGGTTGAGTTaGCACCACTGTTCAACATCA +
Preference number: 5 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKLSRLS*HHCSTS
Trigger: TGATGTTGAACAGTGGTGCAAACTCAACCTGGACAA...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTATGACATTGTCCAGGTaGAGTTTGCACCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSMTLSR*SLHHCS
Trigger: TGAACAGTGGTGCAAACTCAACCTGGACAATGTCAT...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAATGACATTGTCCAGGTaGAGTTTGCACCACTGTTCA +
Preference number: 5 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEMTLSR*SLHHCS
Trigger: TGAACAGTGGTGCAAACTCAACCTGGACAATGTCAT...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTGCTGTATAACATTAGCATGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 5 (lower is better)
Translates to: KPFMYSGTGHPACCITLACQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...TGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GAGAAAATCAAGGTTAGAAACAGTTACTGTCATTTGTCCAGATCATACAGCTACAAAAGAGGCCTCTCTTaGTTGTGGTTCACAACACAA +
Preference number: 5 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYKRGLS*LWFTTQ
Trigger: TTGTGTTGTGAACCACAACAAAGAGAGGCCTCTTTT...GTAGCTGTATGATCTGGACAAATGACAGTAACTGTTTCTAACCTTGATTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617633.5
CDS-3UTR CAA 90 bp CCATCTTCAAACAGTTTATCTGATTCGTCTACTACAAGCCACTCAACACTTGCTAAGCTGATCATGATCTaGTACAACATTATGACAGCA +
Preference number: 5 (lower is better)
Translates to: PSSNSLSDSSTTSHSTLAKLIMI*YNIMTA
Trigger: TGCTGTCATAATGTTGTACAAGATCATGATCAGCTT...AGCAAGTGTTGAGTGGCTTGTAGTAGACGAATCAGATAAACTGTTTGAAGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GAGAAAATCAAGGTTAGAAACAGTTACTGTCATTTGTCCAGATCATACAGCTACGTCCTGGAATCCTTTTaGTTCCTCTTCTTTGCCTAT +
Preference number: 5 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYVLESF*FLFFAY
Trigger: ATAGGCAAAGAAGAGGAACAAAAAGGATTCCAGGAC...GTAGCTGTATGATCTGGACAAATGACAGTAACTGTTTCTAACCTTGATTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617633.5
CDS TCA 90 bp TTCTCTATCTTCACTGGAATAGTGGTTACACAGGGCATGCATTGCTaGAACTCACTAAACTGGGCACTTAAAAATCTATGCATTTTATTG +
Preference number: 5 (lower is better)
Translates to: FSIFTGIVVTQGMHC*NSLNWALKNLCILL
Trigger: CAATAAAATGCATAGATTTTTAAGTGCCCAGTTTAGTGAGTTTCAGCAATGCATGCCCTGTGTAACCACTATTCCAGTGAAGATAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619418.1
ENST00000633791.1
CDS-3UTR CAA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGAGGAAGATCGGTTCCTaGGACGTGAATTTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKRKIGS*DVNFVF
Trigger: AAACACAAAATTCACGTCCAAGGAACCGATCTTCCT...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GAGAAAATCAAGGTTAGAAACAGCTACTGTCATTTGTCCAGATCATACAGCTACTGTCAAGGCTTTATTTaGAATTTCTGTTCCAGATGC +
Preference number: 5 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYCQGFI*NFCSRC
Trigger: GCATCTGGAACAGAAATTCAAAATAAAGCCTTGACA...GTAGCTGTATGATCTGGACAAATGACAGTAGCTGTTTCTAACCTTGATTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615769.2
CDS-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGCCTCCAGAATATATATaGGGTAAAGGATCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKPPEYI*GKGSVC
Trigger: GCAAACAGATCCTTTACCCAATATATATTCTGGAGG...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGCCTCTTCTTTGCCTATaGGTTTTTACATTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKPLLCL*VFTFAG
Trigger: TCCTGCAAATGTAAAAACCAATAGGCAAAGAAGAGG...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GAGAAAATCAAGGTTAGAAACAGTTACTGTCATTTGTCCAGATCATACAGCTACAACAGTTACTGTCATTaGTCCAGATCATACAGCTAC +
Preference number: 5 (lower is better)
Translates to: EKIKVRNSYCHLSRSYSYNSYCH*SRSYSY
Trigger: GTAGCTGTATGATCTGGACAAATGACAGTAACTGTT...GTAGCTGTATGATCTGGACAAATGACAGTAACTGTTTCTAACCTTGATTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617633.5
CDS-3UTR CAA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGAACAAAGAGAAGCTCTaGTTCTACAGTTTCTACTGC +
Preference number: 5 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLNKEKL*FYSFYC
Trigger: GCAGTAGAAACTGTAGAACAAGAGCTTCTCTTTGTT...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS-3UTR CAA 90 bp GTAGTACTGATAACATTCAAGTCATTCTTAGGCACCAGTCTTACGTATATGAAGGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 5 (lower is better)
Translates to: VVLITFKSFLGTSLTYMKVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...CTTCATATACGTAAGACTGGTGCCTAAGAATGACTTGAATGTTATCAGTACTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CAA 90 bp TTACATTGTAAGGGTAAGGACTGTGTTATCAAGCCTGTATTCCTAACAAAATCTCCTCCAGAATATATATaGGGTAAAGGATCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: LHCKGKDCVIKPVFLTKSPPEYI*GKGSVC
Trigger: GCAAACAGATCCTTTACCCAATATATATTCTGGAGG...AGATTTTGTTAGGAATACAGGCTTGATAACACAGTCCTTACCCTTACAATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000631762.1
CDS-3UTR CAA 90 bp TATGAGCTCATGAAAAAGTTCTTTAGCCCTTTCAATGGACTGAACAAAAACAAGTTTTGTCTTCAATCTTaGCTTCTACAGATGACATCC +
Preference number: 5 (lower is better)
Translates to: YELMKKFFSPFNGLNKNKFCLQS*LLQMTS
Trigger: GGATGTCATCTGTAGAAGCAAAGATTGAAGACAAAA...CTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000612255.4
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAACAAGAACAGGTGGATaGAAACCCTTTTTAACAAGT +
Preference number: 5 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHETRTGG*KPFLTS
Trigger: ACTTGTTAAAAAGGGTTTCAATCCACCTGTTCTTGT...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633389.1
CDS-3UTR CAA 90 bp GTTGATTTCAAATGTTTGGTACAGGTGACTGTAAGACTTCAAGTATTCCATGAAGTTGATTTCAAATGTTaGGTACAGGTGACTGTAAGA +
Preference number: 5 (lower is better)
Translates to: VDFKCLVQVTVRLQVFHEVDFKC*VQVTVR
Trigger: TCTTACAGTCACCTGTACCAAACATTTGAAATCAAC...TTCATGGAATACTTGAAGTCTTACAGTCACCTGTACCAAACATTTGAAATCAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615769.2
ENST00000616646.4
ENST00000617633.5
ENST00000620209.4
ENST00000631762.1
ENST00000633389.1
CDS-3UTR CAA 90 bp GATGAACAATTTTTGTCCCATCTAAAATATTCAAAGCAAAGTCCACCTGTTCTGAAGCACGTAGTTTGCTaGCTAACAAGTAATGGATTA +
Preference number: 5 (lower is better)
Translates to: DEQFLSHLKYSKQSPPVLKHVVC*LTSNGL
Trigger: TAATCCATTACTTGTTAGCAAGCAAACTACGTGCTT...CAGAACAGGTGGACTTTGCTTTGAATATTTTAGATGGGACAAAAATTGTTCATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615769.2
ENST00000617633.5
CDS CAA 72 bp CGAGCTGCGTCTGCCGAGAAGCGTCTCGTGTCGAATTaGGCCCCCGCGCCGAGCCGGCGAAAGAGATCGTGG +
Preference number: 6 (lower is better)
Translates to: RAASAEKRLVSN*APAPSRRKRSW
Trigger: CCACGATCTCTTTCGCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGACGCTTCTCGGCAGACGCAGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000614307.4
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000632030.1
ENST00000632046.1
ENST00000633356.1
ENST00000633389.1
CDS CCA 72 bp GAGCTGCGTCTGCCGAGAAGCGTCTCGTGTCGAATTTaGCCCCCGCGCCGAGCCGGCGAAAGAGATCGTGGA +
Preference number: 6 (lower is better)
Translates to: ELRLPRSVSCRI*PPRRAGERDRG
Trigger: TCCACGATCTCTTTCGCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGACGCTTCTCGGCAGACGCAGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000614307.4
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000632030.1
ENST00000632046.1
ENST00000633356.1
ENST00000633389.1
CDS CAA 90 bp ATCTGGAATCGAGCTGCGTCTGCCGAGAAGCGTCTCGTGTCGAATTaGGCCCCCGCGCCGAGCCGGCGAAAGAGATCGTGGACGTCCATC +
Preference number: 6 (lower is better)
Translates to: IWNRAASAEKRLVSN*APAPSRRKRSWTSI
Trigger: GATGGACGTCCACGATCTCTTTCGCCGGCTCGGCGCGGGGGCCAAATTCGACACGAGACGCTTCTCGGCAGACGCAGCTCGATTCCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000632030.1
ENST00000633356.1
ENST00000633389.1
CDS CCA 72 bp AATTTGGCCCCCGCGCCGAGCCGGCGAAAGAGATCGTaGACGTCCATCTTTACCCAGAAAGCGCCACAGTTC +
Preference number: 6 (lower is better)
Translates to: NLAPAPSRRKRS*TSIFTQKAPQF
Trigger: GAACTGTGGCGCTTTCTGGGTAAAGATGGACGTCCACGATCTCTTTCGCCGGCTCGGCGCGGGGGCCAAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612255.4
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000633356.1
ENST00000633389.1
CDS GCA 72 bp ATATTTCCTTTTTCCTATCTGGAATCGAGCTGCGTCTaGCGAGAAGCGTCTCGTGTCGAATTTGGCCCCCGC +
Preference number: 6 (lower is better)
Translates to: IFPFSYLESSCV*REASRVEFGPR
Trigger: GCGGGGGCCAAATTCGACACGAGACGCTTCTCGGCAGACGCAGCTCGATTCCAGATAGGAAAAAGGAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000612255.4
ENST00000613633.1
ENST00000614307.4
ENST00000615769.2
ENST00000617633.5
ENST00000620209.4
ENST00000632030.1
ENST00000632046.1
ENST00000633356.1
ENST00000633389.1
CDS CCA 72 bp TCTGAGAGGCAAGCTTCTGTCCCTTGGGATAAGAGCTaGGACAACACGCTTCTTAACCATTTACTCCTAGAT +
Preference number: 6 (lower is better)
Translates to: SERQASVPWDKS*DNTLLNHLLLD
Trigger: ATCTAGGAGTAAATGGTTAAGAAGCGTGTTGTCCCAGCTCTTATCCCAAGGGACAGAAGCTTGCCTCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622140.1
ENST00000631452.1
CDS CAA 72 bp GATCTTCATACTCACATGCAGCATAACTGGGATGGCTaGCATTTGGATTGGCGTAGGCATTTGGAAACCTGC +
Preference number: 6 (lower is better)
Translates to: DLHTHMQHNWDG*HLDWRRHLETC
Trigger: GCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGTGAGTATGAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619418.1
ENST00000633791.1
CDS TCA 72 bp CTGACTGAAGCCAGAGTCAAGCTTAAATTCATTAAGTaGAAGTGCCTACTATGGGGTTGGCACCGTTGCCAA +
Preference number: 6 (lower is better)
Translates to: LTEARVKLKFIK*KCLLWGWHRCQ
Trigger: TTGGCAACGGTGCCAACCCCATAGTAGGCACTTTCACTTAATGAATTTAAGCTTGACTCTGGCTTCAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614307.4
ENST00000632046.1
CDS GCA 72 bp ATCTTCATACTCACATGCAGCATAACTGGGATGGCTTaGATTTGGATTGGCGTAGGCATTTGGAAACCTGCA +
Preference number: 6 (lower is better)
Translates to: IFILTCSITGMA*IWIGVGIWKPA
Trigger: TGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGTGAGTATGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619418.1
ENST00000633791.1
CDS CCA 72 bp ATACTCACATGCAGCATAACTGGGATGGCTTGCATTTaGATTGGCGTAGGCATTTGGAAACCTGCATCTAGA +
Preference number: 6 (lower is better)
Translates to: ILTCSITGMACI*IGVGIWKPASR
Trigger: TCTAGATGCAGGTTTCCAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGTGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619418.1
ENST00000633791.1
CDS CCA 72 bp GGCATTCTAGATCTTCATACTCACATGCAGCATAACTaGGATGGCTTGCATTTGGATTGGCGTAGGCATTTG +
Preference number: 6 (lower is better)
Translates to: GILDLHTHMQHN*DGLHLDWRRHL
Trigger: CAAATGCCTACGCCAATCCAAATGCAAGCCATCCCAGTTATGCTGCATGTGAGTATGAAGATCTAGAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619418.1
ENST00000633791.1
CDS CCA 72 bp TTGGAGTTGCTGAGGCCTATGGTGGATCTAGGTTGTTaGAATATACCCCTCTACACACGCACATTTGAATCT +
Preference number: 6 (lower is better)
Translates to: LELLRPMVDLGC*NIPLYTRTFES
Trigger: AGATTCAAATGTGCGTGTGTAGAGGGGTATATTCCAACAACCTAGATCCACCATAGGCCTCAGCAACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614307.4
ENST00000632046.1
CDS CAA 72 bp ACTAATATTTGGGTCATGGGATTCACATGCTTGGAGTaGCTGAGGCCTATGGTGGATCTAGGTTGTTGGAAT +
Preference number: 6 (lower is better)
Translates to: TNIWVMGFTCLE*LRPMVDLGCWN
Trigger: ATTCCAACAACCTAGATCCACCATAGGCCTCAGCAACTCCAAGCATGTGAATCCCATGACCCAAATATTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614307.4
ENST00000632046.1
CDS CAA 72 bp GTGCCTACTATGGGGTTGGCACCGTTGCCAAGTTTTTaGTGTATAGTAACTTCTTCACTCTTCACAACAAGC +
Preference number: 6 (lower is better)
Translates to: VPTMGLAPLPSF*CIVTSSLFTTS
Trigger: GCTTGTTGTGAAGAGTGAAGAAGTTACTATACACAAAAAACTTGGCAACGGTGCCAACCCCATAGTAGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614307.4
ENST00000632046.1
CDS CAA 72 bp CATTTATCAAGCCCTACAAAACTGGTAAACTCAATCTaGGAGGAAGCACTGACTGAAGCCAGAGTCAAGCTT +
Preference number: 6 (lower is better)
Translates to: HLSSPTKLVNSI*EEALTEARVKL
Trigger: AAGCTTGACTCTGGCTTCAGTCAGTGCTTCCTCCAAGATTGAGTTTACCAGTTTTGTAGGGCTTGATAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614307.4
ENST00000632046.1
CDS TCA 72 bp TTCACTGGAATAGTGGTTACACAGGGCATGCATTGCTaGAACTCACTAAACTGGGCACTTAAAAATCTATGC +
Preference number: 6 (lower is better)
Translates to: FTGIVVTQGMHC*NSLNWALKNLC
Trigger: GCATAGATTTTTAAGTGCCCAGTTTAGTGAGTTTCAGCAATGCATGCCCTGTGTAACCACTATTCCAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619418.1
ENST00000633791.1
CDS GCA 72 bp AAACCTTTTATGTATTCTGGTACAGGACACCCAGCCTaGTGTATAACATTAGCAACGCTGAAAAAGAAACCC +
Preference number: 6 (lower is better)
Translates to: KPFMYSGTGHPA*CITLATLKKKP
Trigger: GGGTTTCTTTTTCAGCGTTGCTAATGTTATACAGCAGGCTGGGTGTCCTGTACCAGAATACATAAAAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614307.4
ENST00000632046.1
CDS CCA 72 bp ATAAATGTTGCAAGGAAAAGAACACACCAAATACCATaGAAGAACTGCAGTGTGGGGGAAAGGGTACTAGAA +
Preference number: 6 (lower is better)
Translates to: INVARKRTHQIP*KNCSVGERVLE
Trigger: TTCTAGTACCCTTTCCCCCACACTGCAGTTCTTCCATGGTATTTGGTGTGTTCTTTTCCTTGCAACATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619418.1
ENST00000633791.1
CDS CAA 90 bp GTCAAGTTGCTGAAATGTAGCAATTGGGTCAGGAAGATCGGTTCCTaGGACGTGAATTTTGTGTTTATTCCGCAAGAAGTTTATCTGAAG +
Preference number: 6 (lower is better)
Translates to: VKLLKCSNWVRKIGS*DVNFVFIPQEVYLK
Trigger: CTTCAGATAAACTTCTTGCGGAATAAACACAAAATTCACGTCCAAGGAACCGATCTTCCTGACCCAATTGCTACATTTCAGCAACTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613633.1
ENST00000632030.1
CDS CCA 72 bp ACAGATGACATCCACTGTATAGTAGCACCTTCTTCTTaGGAAGCAATTTCTGAAGTCATCGTCTTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: TDDIHCIVAPSS*EAISEVIVFLF
Trigger: AAAAAGGAAGACGATGACTTCAGAAATTGCTTCCCAAGAAGAAGGTGCTACTATACAGTGGATGTCATCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000614307.4
ENST00000615769.2
ENST00000617633.5
ENST00000619418.1
ENST00000632046.1
ENST00000633791.1
CDS CCA 72 bp GTGAGGACTGAATGGAAAGGGCACAAGAAAATTGTCTaGGGTAATACATATGTTCTCTATCTTCACTGGAAT +
Preference number: 6 (lower is better)
Translates to: VRTEWKGHKKIV*GNTYVLYLHWN
Trigger: ATTCCAGTGAAGATAGAGAACATATGTATTACCCCAGACAATTTTCTTGTGCCCTTTCCATTCAGTCCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619418.1
ENST00000633791.1
CDS CAA 90 bp CTATTTCAACATTTATCAAGCCCTACAAAACTGGTAAACTCAATCTaGGAGGAAGCACTGACTGAAGCCAGAGTCAAGCTTAAATTCATT +
Preference number: 6 (lower is better)
Translates to: LFQHLSSPTKLVNSI*EEALTEARVKLKFI
Trigger: AATGAATTTAAGCTTGACTCTGGCTTCAGTCAGTGCTTCCTCCAAGATTGAGTTTACCAGTTTTGTAGGGCTTGATAAATGTTGAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614307.4
ENST00000632046.1