RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDX49 (Homo sapiens)

Ensembl gene IDs: ENSG00000105671

Ensembl transcript IDs: ENST00000247003.9, ENST00000593361.5, ENST00000594021.5, ENST00000595858.5, ENST00000598277.5, ENST00000598972.5, ENST00000599156.5, ENST00000599373.5, ENST00000599981.5, ENST00000601803.5, ENST00000602113.5, ENST00000629999.3

Found 626 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCTGGGAGGGGACTGGGCCTGAGTGGGACCCAGACGGTGTCCTaGGTGGACGCCCCTTGTGGCCAGCCCTGCCAGCCTTCTGTCGCT +
Preference number: 1 (lower is better)
Translates to: GPGRGLGLSGTQTVS*VDAPCGQPCQPSVA
Trigger: AGCGACAGAAGGCTGGCAGGGCTGGCCACAAGGGGCGTCCACCCAGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCTCCCAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 90 bp TGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTaGACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGG +
Preference number: 1 (lower is better)
Translates to: WPDPAAPGVCRSAWR*TAVSACGPAQPPGW
Trigger: CCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 90 bp GCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCTCATCCA +
Preference number: 1 (lower is better)
Translates to: ACGPAQPPGWPPGPR*SQCSPVPAAGLPHP
Trigger: TGGATGAGGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 90 bp CGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTaGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGC +
Preference number: 1 (lower is better)
Translates to: RCSPGPVLPRRRAGW*PDPAAPGVCRSAWR
Trigger: GCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 90 bp GCGCAGGTGATCTGCCAGGCGCCCCGGCGTGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCC +
Preference number: 1 (lower is better)
Translates to: AQVICQAPRRGDDHV*FPRELQRLGHHVHA
Trigger: GGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR CCA 90 bp GGGCCTGAGTGGGACCCAGACGGTGTCCTGGGTGGACGCCCCTTGTaGCCAGCCCTGCCAGCCTTCTGTCGCTTCAGCGTCTCCTCCACC +
Preference number: 1 (lower is better)
Translates to: GPEWDPDGVLGGRPL*PALPAFCRFSVSST
Trigger: GGTGGAGGAGACGCTGAAGCGACAGAAGGCTGGCAGGGCTGGCCACAAGGGGCGTCCACCCAGGACACCGTCTGGGTCCCACTCAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 90 bp TGTTGGAGCTGCGCAGGTGATCTGCCAGGCGCCCCGGCGTGGCGATaGCCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCA +
Preference number: 1 (lower is better)
Translates to: CWSCAGDLPGAPAWR*PRVVSERAPAPGPP
Trigger: TGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR CCA 90 bp CCACGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGG +
Preference number: 1 (lower is better)
Translates to: PRCSPGPVLPRRRAG*WPDPAAPGVCRSAW
Trigger: CCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 90 bp TGCTCCACGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGC +
Preference number: 1 (lower is better)
Translates to: CSTVLTGACASQKKG*LVARPCSSRSVSVS
Trigger: GCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCGTGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR GCA 90 bp GGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTaGAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGT +
Preference number: 1 (lower is better)
Translates to: GACASQKKGWLVARP*SSRSVSVSVALNSS
Trigger: ACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 90 bp AAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATaGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCAGACC +
Preference number: 1 (lower is better)
Translates to: KGCCPQGRFLRPSAP*TSQGLGRWPCGAQT
Trigger: GGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 90 bp GCTCATCCTGGAAGCGCTGGATCAGGTGGACCAGGTAGGCGTCCTTaGCCTTCTCAGGCACCAGCAGGTAGCGCTGGTCCAGCTGCTCCA +
Preference number: 1 (lower is better)
Translates to: AHPGSAGSGGPGRRP*PSQAPAGSAGPAAP
Trigger: TGGAGCAGCTGGACCAGCGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATCCAGCGCTTCCAGGATGAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 90 bp TGGCCCCTTCACTCTGGCCACAAACCCCAGATGTGGCCAGGTGGGTaGCCAGGGAAGCTTATAGCTGCACCCATTCGGCACAGGACTGAC +
Preference number: 1 (lower is better)
Translates to: WPLHSGHKPQMWPGG*PGKLIAAPIRHRTD
Trigger: GTCAGTCCTGTGCCGAATGGGTGCAGCTATAAGCTTCCCTGGCCACCCACCTGGCCACATCTGGGGTTTGTGGCCAGAGTGAAGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR GCA 90 bp CGCTTCAGCGTCTCCTCCACCTTCTCCTTGAAGCGCCGGTTCTTCTaGTTGATCTTGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCA +
Preference number: 1 (lower is better)
Translates to: RFSVSSTFSLKRRFF*LILASSALRLASRS
Trigger: TGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGAGACGCTGAAGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 90 bp CACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCTGAATCTTaGCCAGGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGA +
Preference number: 1 (lower is better)
Translates to: HNLPVMFFLPLQPES*PGLREGTSQWFRGR
Trigger: TCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCCTGGCCAAGATTCAGGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR GCA 90 bp GCGGATCTTCTTTATACTAAAAGTGTTGGAGCTGCGCAGGTGATCTaGCAGGCGCCCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGA +
Preference number: 1 (lower is better)
Translates to: ADLLYTKSVGAAQVI*QAPRRGDDHVWFPR
Trigger: TCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAACACTTTTAGTATAAAGAAGATCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR CCA 90 bp CCCACATTGTCTGGCCAAATTTGGACTTTCATGGCCCCTTCACTCTaGCCACAAACCCCAGATGTGGCCAGGTGGGTGGCCAGGGAAGCT +
Preference number: 1 (lower is better)
Translates to: PTLSGQIWTFMAPSL*PQTPDVARWVAREA
Trigger: AGCTTCCCTGGCCACCCACCTGGCCACATCTGGGGTTTGTGGCCAGAGTGAAGGGGCCATGAAAGTCCAAATTTGGCCAGACAATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR TCA 90 bp AGGAAGCGGATCTTCTTTATACTAAAAGTGTTGGAGCTGCGCAGGTaGTCTGCCAGGCGCCCCGGCGTGGCGATGACCACGTGTGGTTTC +
Preference number: 1 (lower is better)
Translates to: RKRIFFILKVLELRR*SARRPGVAMTTCGF
Trigger: GAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAACACTTTTAGTATAAAGAAGATCCGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR CCA 90 bp AGCTGGTGTCTGCAAAACTTTGGGCCTGCCTGGTGGAAATGGACATaGTGTTCTGGGCAGACACCTGAGAAACAACAGCGGCTGCACCCC +
Preference number: 1 (lower is better)
Translates to: SWCLQNFGPAWWKWT*CSGQTPEKQQRLHP
Trigger: GGGGTGCAGCCGCTGTTGTTTCTCAGGTGTCTGCCCAGAACACCATGTCCATTTCCACCAGGCAGGCCCAAAGTTTTGCAGACACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR TCA 90 bp GGGAGGCCACGTCTGTTGCGATCAGGATCCGGTAGATGCTGGACTTaGACTTGGCTAGGGCGGCAAAGCGTTCTTTCTGCTTCATCATGG +
Preference number: 1 (lower is better)
Translates to: GRPRLLRSGSGRCWT*TWLGRQSVLSASSW
Trigger: CCATGATGAAGCAGAAAGAACGCTTTGCCGCCCTAGCCAAGTTCAAGTCCAGCATCTACCGGATCCTGATCGCAACAGACGTGGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 90 bp CCCAAAATCCCATGGCCATTCGAGCAGCTGGTGTCTGCAAAACTTTaGGCCTGCCTGGTGGAAATGGACATGGTGTTCTGGGCAGACACC +
Preference number: 1 (lower is better)
Translates to: PKIPWPFEQLVSAKL*ACLVEMDMVFWADT
Trigger: GGTGTCTGCCCAGAACACCATGTCCATTTCCACCAGGCAGGCCCAAAGTTTTGCAGACACCAGCTGCTCGAATGGCCATGGGATTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR TCA 90 bp GTTCTTTCTGCTTCATCATGGAGTGCAGAGCCACGGTGGGGAAGCTaGATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACG +
Preference number: 1 (lower is better)
Translates to: VLSASSWSAEPRWGS*ICAASCTESGRSCT
Trigger: CGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCACCGTGGCTCTGCACTCCATGATGAAGCAGAAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 90 bp ATCTGGGCACTTAACATGTCGCCGGCGCCTTTCCCTGCGTCTTTTTaGGTGCCCCTGAATCCATGTAGCAGTTATAAGCCGCTTGCAGAT +
Preference number: 1 (lower is better)
Translates to: IWALNMSPAPFPASF*VPLNPCSSYKPLAD
Trigger: ATCTGCAAGCGGCTTATAACTGCTACATGGATTCAGGGGCACCCAAAAAGACGCAGGGAAAGGCGCCGGCGACATGTTAAGTGCCCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR-3UTR GCA 90 bp AGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGACAGCAGTGTCTGCCTaGGGGCCGGCACAGCCGCCA +
Preference number: 2 (lower is better)
Translates to: SSVCLRAGTAARMASRSTTAVSA*GPAQPP
Trigger: TGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT...CGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp GGCCTGACCCTGCCGCCCTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATGGAGGCAGAGGTGGCTaGTCAGCTCCACGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: GLTLPPCTGRPADSVDVDGGRGG*SAPREA
Trigger: GGCCTCCCGTGGAGCTGACCAGCCACCTCTGCCTCC...ATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAGGGCGGCAGGGTCAGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595858.5
3UTR-3UTR GCA 90 bp CGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGACAGCAGTGTCTGCCTaGGGGCCGGCACAGCCGCCA +
Preference number: 2 (lower is better)
Translates to: RAGTAARMASRSTVKSVQTAVSA*GPAQPP
Trigger: TGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT...CTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp CTGACCCTGCCGCCCTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATCTTGCCCCCGGGAAGGGCTaGTGCCCCCAAGGAAGGTTC +
Preference number: 2 (lower is better)
Translates to: LTLPPCTGRPADSVDVDLAPGKG*CPQGRF
Trigger: GAACCTTCCTTGGGGGCAGCAGCCCTTCCCGGGGGC...AAGATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAGGGCGGCAGGGTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: AGWWPDPAAPGVCRSAWRLNSSV*LRAGTA
Trigger: GGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAG...GCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp CGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: RAGTAARMASRSTVKSVQLNSSV*LRAGTA
Trigger: GGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAG...CTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp GCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCGAGAGCTCCAGCGCCTaGGCCACCATGTCCATGCCA +
Preference number: 2 (lower is better)
Translates to: ALNSSVCLRAGTAARMASESSSA*ATMSMP
Trigger: TGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTC...GGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594021.5
ENST00000602113.5
3UTR CAA 90 bp ACTGGGCCTGAGTGGGACCCAGACGGTGTCCTGGGTGGACGCCCCTaGTGGCCAGCCCTGCCAGCCTTCTGTCGCTTCAGCGTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TGPEWDPDGVLGGRP*WPALPAFCRFSVSS
Trigger: GGAGGAGACGCTGAAGCGACAGAAGGCTGGCAGGGCTGGCCACAAGGGGCGTCCACCCAGGACACCGTCTGGGTCCCACTCAGGCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTaGTGTGGGGCACTGGGTAGG +
Preference number: 2 (lower is better)
Translates to: GKGPASGFGAEEQGPHNTSAHGF*CGALGR
Trigger: CCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCT...CGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTTGGTGGCCAGACCCTaGAGCTCCCGGAGTGTGTCG +
Preference number: 2 (lower is better)
Translates to: AGWWPDPAAPGVCRSAWRLVARP*SSRSVS
Trigger: CGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAA...GCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp AGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACTCTGCTGTGGGGCACTaGGTAGGCCCCCGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: REGTSQWFRGRGAGPAQHSAVGH*VGPREG
Trigger: CCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGA...GTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp CACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGATGTATGCGGCACCCCTaGGGGGTGACCTTGGGTTGG +
Preference number: 2 (lower is better)
Translates to: HNTSAHGFCCGALGRPPGCMRHP*GVTLGW
Trigger: CCAACCCAAGGTCACCCCCCAGGGGTGCCGCATACA...TCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp AGGCCCTGGGAGGGGACTGGGCCTGAGTGGGACCCAGACGGTGTCCTGGGTGGATGTATGCGGCACCCCTaGGGGGTGACCTTGGGTTGG +
Preference number: 2 (lower is better)
Translates to: RPWEGTGPEWDPDGVLGGCMRHP*GVTLGW
Trigger: CCAACCCAAGGTCACCCCCCAGGGGTGCCGCATACA...TCCACCCAGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCTCCCAGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp GGCCTGACCCTGCCGCCCTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGC +
Preference number: 2 (lower is better)
Translates to: GLTLPPCTGRPADSVDVDSQKKG*LVARPC
Trigger: GCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGA...ATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAGGGCGGCAGGGTCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp CCCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCGAGAGCTCCAGCGCCTaGGCCACCATGTCCATGCCA +
Preference number: 2 (lower is better)
Translates to: PRRGDDHVWFPRELQRLGESSSA*ATMSMP
Trigger: TGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTC...GCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR-3UTR TCA 90 bp CCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGCGGTCAGCGTGGCGCTaGACAGCAGTGTCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: PRRRAGWWPDPAAPGVCRRSAWR*TAVSAC
Trigger: GCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCG...CCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR TCA 90 bp CTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCAGACACCAGCGTGATGGCCTaGCCCTGCCGCCCTGCACGG +
Preference number: 2 (lower is better)
Translates to: LSSMDESRTGQMAVWGSDTSVMA*PCRPAR
Trigger: CCGTGCAGGGCGGCAGGGTCAGGCCATCACGCTGGT...GTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp AGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGGCCCCCGGGAAGGGCTaGTGCCCCCAAGGAAGGTTC +
Preference number: 2 (lower is better)
Translates to: SRQDGLQVHGEVSAALFQAPGKG*CPQGRF
Trigger: GAACCTTCCTTGGGGGCAGCAGCCCTTCCCGGGGGC...CTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGGCCCCCGGGAAGGGCTaGTGCCCCCAAGGAAGGTTC +
Preference number: 2 (lower is better)
Translates to: VLPRRRAGWWPDPAAPGVAPGKG*CPQGRF
Trigger: GAACCTTCCTTGGGGGCAGCAGCCCTTCCCGGGGGC...CACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GGCCTGACCCTGCCGCCCTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATATGGACCAGTCCTCGTaGTCATCCTGGAAGCGCTGG +
Preference number: 2 (lower is better)
Translates to: GLTLPPCTGRPADSVDVDMDQSS*SSWKRW
Trigger: CCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCAT...ATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAGGGCGGCAGGGTCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp CTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATCTTGGGGAGCCCGGGGGAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: LHGPSGRLGGCRSWGARGRRRAG*WPDPAA
Trigger: AGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT...CCCCCGGGCTCCCCAAGATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR TCA 90 bp CCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTCCTCCACCTTCTCCTTaGAGCGCCGGTTCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: PVVSGQRSRARTTRAPTGPPPSP*SAGSSA
Trigger: AGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGG...ACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGCCCCCGGGAAGGGCTaGTGCCCCCAAGGAAGGTTC +
Preference number: 2 (lower is better)
Translates to: GCCPQGRFLRPSAPWTSQAPGKG*CPQGRF
Trigger: GAACCTTCCTTGGGGGCAGCAGCCCTTCCCGGGGGC...TTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp CTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATCTTGGGGAGCCCGGGGGTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 2 (lower is better)
Translates to: LHGPSGRLGGCRSWGARGFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...CCCCCGGGCTCCCCAAGATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: VLPRRRAGWWPDPAAPGVLNSSV*LRAGTA
Trigger: GGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAG...CACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAAGGGCTGCTGCCAGCTTCTTCTTGATCTaGTCCTCGATGGCGTGCACC +
Preference number: 2 (lower is better)
Translates to: AHGFCCGALGRPPGRAAASFFLI*SSMACT
Trigger: GGTGCACGCCATCGAGGAGCAGATCAAGAAGAAGCT...GGCAGCAGCCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp CAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGCTGTCTGCTGTGGGGCACTaGGTAGGCCCCCGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QVDQVGVLDLLRHQQVALSAVGH*VGPREG
Trigger: CCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGA...CAGCGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp ACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTGTATGCGGCACCCCTaGGGGGTGACCTTGGGTTGG +
Preference number: 2 (lower is better)
Translates to: TGACASQKKGWLVARPCSCMRHP*GVTLGW
Trigger: CCAACCCAAGGTCACCCCCCAGGGGTGCCGCATACA...GCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp CCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: PECVGQRGAEQQCLPAGRRRRAG*WPDPAA
Trigger: AGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT...CCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp AGGCCCTGGGAGGGGACTGGGCCTGAGTGGGACCCAGACGGTGTCCTGGGTGGATCCTCGTGCTCATCCTaGAAGCGCTGGATCAGGTGG +
Preference number: 2 (lower is better)
Translates to: RPWEGTGPEWDPDGVLGGSSCSS*KRWIRW
Trigger: CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGA...TCCACCCAGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCTCCCAGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR TCA 90 bp AGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACACCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: SVSVSVALNSSVCLRAGTPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...TGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp ACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGGCTCACCGGGGCCTGTaGTTCCCAGAAGAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: TLQLPECVGQRGAEQQCLAHRGL*FPEEGL
Trigger: CAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGC...CAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCGCTCACCGGGGCCTGTaGTTCCCAGAAGAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: DPQLHGRVKDWADGRVGLAHRGL*FPEEGL
Trigger: CAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGC...GAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp GAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGGGACGAGTCAAGGACTaGGCAGATGGCCGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: EGLLPPRKVPPTLSSMDEGRVKD*ADGRVG
Trigger: CCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCC...CTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR TCA 90 bp GGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGGGTAGATGCTGGACTTaGACTTGGCTAGGGCGGCAA +
Preference number: 2 (lower is better)
Translates to: GKGPASGFGAEEQGPHNTGRCWT*TWLGRQ
Trigger: TTGCCGCCCTAGCCAAGTTCAAGTCCAGCATCTACC...CGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GGCCGTCCGGCCGACTCGGTGGATGTAGATCTTGGGGAGCCCGGGGGTGTTGTGTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 2 (lower is better)
Translates to: GRPADSVDVDLGEPGGVVFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...CACAACACCCCCGGGCTCCCCAAGATCTACATCCACCGAGTCGGCCGGACGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GTGCTCATCCTGGAAGCGCTGGATCAGGTGGACCAGGTAGGCGTCCTTGACCTTACAGCAGTGTCTGCCTaGGGGCCGGCACAGCCGCCA +
Preference number: 2 (lower is better)
Translates to: VLILEALDQVDQVGVLDLTAVSA*GPAQPP
Trigger: TGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT...AAGGTCAAGGACGCCTACCTGGTCCACCTGATCCAGCGCTTCCAGGATGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp CCAGGCCCCGGGAGGCCACGTCTGTTGCGATCAGGATCCGGTAGATGCTGGACTGAAGGGACCAGCCAGTaGTTTCGGGGCAGAGGAGCA +
Preference number: 2 (lower is better)
Translates to: PGPGRPRLLRSGSGRCWTEGTSQ*FRGRGA
Trigger: TGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTC...AGTCCAGCATCTACCGGATCCTGATCGCAACAGACGTGGCCTCCCGGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp CTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCAGACTGTATGCGGCACCCCTaGGGGGTGACCTTGGGTTGG +
Preference number: 2 (lower is better)
Translates to: LSSMDESRTGQMAVWGSDCMRHP*GVTLGW
Trigger: CCAACCCAAGGTCACCCCCCAGGGGTGCCGCATACA...GTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp AGCGCCTGGGCCACCATGTCCATGCCACCGACGATGATGCAGTCTTTCAGCCCTGGTAGGCCAGCTCCCTaGTGGGTGTCAGGACGAGGC +
Preference number: 2 (lower is better)
Translates to: SAWATMSMPPTMMQSFSPGRPAP*WVSGRG
Trigger: GCCTCGTCCTGACACCCACCAGGGAGCTGGCCTACC...AGGGCTGAAAGACTGCATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602113.5
3UTR-3UTR CCA 90 bp GTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGCTGGTCCAGCTGCTCCACGGTGAGAGCTCCAGCGCCTaGGCCACCATGTCCATGCCA +
Preference number: 2 (lower is better)
Translates to: VLDLLRHQQVALVQLLHGESSSA*ATMSMP
Trigger: TGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTC...ACCGTGGAGCAGCTGGACCAGCGCTACCTGCTGGTGCCTGAGAAGGTCAAGGAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602113.5
3UTR-3UTR TCA 90 bp AGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCACCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: RRRAGWWPDPAAPGVCRSPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...TGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR TCA 90 bp ATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTCCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: MASRSTVKSVQPCSSSRSPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...AGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp CACGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 2 (lower is better)
Translates to: HGAHRGLCFPEEGLVGGQFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...CTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp CTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTGACCCGGAACTGCTCTaGGATCTGGTAGGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: LPRRRAGWWPDPAAPGVCDPELL*DLVGQL
Trigger: GAGCTGGCCTACCAGATCGCAGAGCAGTTCCGGGTC...ACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602113.5
3UTR-3UTR CCA 90 bp TTGGGGAGCCCGGGGGTGTTGTGGTTGATGACCACCTGTACCGTAGGGATGTCCGGACGAGTCAAGGACTaGGCAGATGGCCGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: LGSPGVLWLMTTCTVGMSGRVKD*ADGRVG
Trigger: CCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCC...GGACATCCCTACGGTACAGGTGGTCATCAACCACAACACCCCCGGGCTCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp GGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGAAGGGACCAGCCAGTaGTTTCGGGGCAGAGGAGCA +
Preference number: 2 (lower is better)
Translates to: GCCPQGRFLRPSAPWTSQEGTSQ*FRGRGA
Trigger: TGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTC...TTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR TCA 90 bp GATCAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGCCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: DQVDQVGVLDLLRHQQVAPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...CGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR TCA 90 bp GTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGACCATGCCACCGACGATaGTGCAGTCTTTCAGCCCTA +
Preference number: 2 (lower is better)
Translates to: VVSERAPAPGPPCPCHRRPCHRR*CSLSAL
Trigger: TAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGG...TCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000602113.5
3UTR-3UTR TCA 90 bp GAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGCCTCCAGCTTCTTCTTaGTCTGCTCCTCGATGGCGT +
Preference number: 2 (lower is better)
Translates to: EGLLPPRKVPPTLSSMDEPPASS*SAPRWR
Trigger: ACGCCATCGAGGAGCAGATCAAGAAGAAGCTGGAGG...CTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp AGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 2 (lower is better)
Translates to: SRQDGLQVHGEVSAALFQFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...CTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp TGCTCCACGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 2 (lower is better)
Translates to: CSTVLTGACASQKKGWLVFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...CACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCGTGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp CTCCTCCACCTTCTCCTTGAAGCGCCGGTTCTTCTGCTTGATCTTGGCCAGCTCCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: LLHLLLEAPVLLLDLGQLLNSSV*LRAGTA
Trigger: GGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAG...GAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp CCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTATTTGCGCAGCATCATaGACAGAATCTGGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: PVVSGQRSRARTTRAPTGICAAS*TESGRS
Trigger: AGACCTGCCAGATTCTGTGCATGATGCTGCGCAAAT...ACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GATCTTCTTTATACTAAAAGTGTTGGAGCTGCGCAGGTGATCTGCCAGGCGCCCGCTGCGCAGGTGATCTaGCAGGCGCCCCGGCGTGGC +
Preference number: 2 (lower is better)
Translates to: DLLYTKSVGAAQVICQAPAAQVI*QAPRRG
Trigger: GCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGC...GGGCGCCTGGCAGATCACCTGCGCAGCTCCAACACTTTTAGTATAAAGAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR-3UTR CCA 90 bp AGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGGACGAGTCAAGGACTaGGCAGATGGCCGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: RKVPPTLSSMDESRTGQMGRVKD*ADGRVG
Trigger: CCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCC...CATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp GTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGCTGGTCCAGCTGCTCCACGGTAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: VLDLLRHQQVALVQLLHGRRRAG*WPDPAA
Trigger: AGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT...ACCGTGGAGCAGCTGGACCAGCGCTACCTGCTGGTGCCTGAGAAGGTCAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp GATCAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGC +
Preference number: 2 (lower is better)
Translates to: DQVDQVGVLDLLRHQQVASQKKG*LVARPC
Trigger: GCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGA...CGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp TCCATGCCACCGACGATGATGCAGTCTTTCAGCCCTAGAGGCTTCCCCAGGACCGGTAGGCCAGCTCCCTaGAGCTCCCAAAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: SMPPTMMQSFSPRGFPRTGRPAP*SSQSAG
Trigger: CCCAGCACTTTGGGAGCTCCAGGGAGCTGGCCTACC...GGTCCTGGGGAAGCCTCTAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593361.5
3UTR CAA 90 bp GTCTCCTCCACCTTCTCCTTGAAGCGCCGGTTCTTCTGCTTGATCTaGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCAGGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: VSSTFSLKRRFFCLI*ASSALRLASRSGSF
Trigger: GAAGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CAA 90 bp GCCCTGCCAGCCTTCTGTCGCTTCAGCGTCTCCTCCACCTTCTCCTaGAAGCGCCGGTTCTTCTGCTTGATCTTGGCCAGCTCAGCCTTG +
Preference number: 2 (lower is better)
Translates to: ALPAFCRFSVSSTFS*KRRFFCLILASSAL
Trigger: CAAGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGAGACGCTGAAGCGACAGAAGGCTGGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp ACGTTGACCTGTGTGAGGATCTGTAGCACCTCGGCCTCTTCCACGGAGAACTCCTTGGTGGCCAGACCCTaGAGCTCCCGGAGTGTGTCG +
Preference number: 2 (lower is better)
Translates to: TLTCVRICSTSASSTENSLVARP*SSRSVS
Trigger: CGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAA...GGAGTTCTCCGTGGAAGAGGCCGAGGTGCTACAGATCCTCACACAGGTCAACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp ATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGCTGGATCAGGTGGACCAGGGCTCACCGGGGCCTGTaGTTCCCAGAAGAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: IMDQSSCSSWKRWIRWTRAHRGL*FPEEGL
Trigger: CAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGC...CCTGGTCCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp CCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCTGCTTCATCATGGAGTaGAGAGCCACGGTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: PQGRFLRPSAPWTSQGLGCFIME*RATVGK
Trigger: CTTCCCCACCGTGGCTCTGCACTCCATGATGAAGCA...GCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp TCTCTTCGCACCACGTTGACCTGTGTGAGGATCTGTAGCACCTCGGCCTCTTCCGGGGTGACCTTGGGTTaGGGTCACAACCTCCCGGTC +
Preference number: 2 (lower is better)
Translates to: SLRTTLTCVRICSTSASSGVTLG*GHNLPV
Trigger: GACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCC...GGAAGAGGCCGAGGTGCTACAGATCCTCACACAGGTCAACGTGGTGCGAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAAGCTTCTTCTTGATCTaGTCCTCGATGGCGTGCACC +
Preference number: 2 (lower is better)
Translates to: GCCPQGRFLRPSAPWTSQSFFLI*SSMACT
Trigger: GGTGCACGCCATCGAGGAGCAGATCAAGAAGAAGCT...TTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CAA 90 bp AAGTGGGCCGCCTCCAGTTTGATCTCACACTCTCTTCGCACCACGTaGACCTGTGTGAGGATCTGTAGCACCTCGGCCTCTTCCACGGAG +
Preference number: 2 (lower is better)
Translates to: KWAASSLISHSLRTT*TCVRICSTSASSTE
Trigger: CTCCGTGGAAGAGGCCGAGGTGCTACAGATCCTCACACAGGTCAACGTGGTGCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR TCA 90 bp GGCCTGCCTGGTGGAAATGGACATGGTGTTCTGGGCAGACACCTGAGAAACAACCCAGGTAGGCGTCCTTaGCCTTCTCAGGCACCAGCA +
Preference number: 2 (lower is better)
Translates to: GLPGGNGHGVLGRHLRNNPGRRP*PSQAPA
Trigger: TGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGG...GTTGTTTCTCAGGTGTCTGCCCAGAACACCATGTCCATTTCCACCAGGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR-3UTR TCA 90 bp TGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCTGAATGCCGGTTCTTCTGCTTaGTCTTGGCCAGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: WVGVTTSRSCSFFPCSLNAGSSA*SWPAQP
Trigger: AGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGC...ATTCAGGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GCAAAGCGTTCTTTCTGCTTCATCATGGAGTGCAGAGCCACGGTGGGGAAGCTGATGGACCAGTCCTCGTaGTCATCCTGGAAGCGCTGG +
Preference number: 2 (lower is better)
Translates to: AKRSFCFIMECRATVGKLMDQSS*SSWKRW
Trigger: CCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCAT...CAGCTTCCCCACCGTGGCTCTGCACTCCATGATGAAGCAGAAAGAACGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp TGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCTGAATAGCCCGGGGGTGTTGTaGTTGATGACCACCTGTACC +
Preference number: 2 (lower is better)
Translates to: WVGVTTSRSCSFFPCSLNSPGVL*LMTTCT
Trigger: GGTACAGGTGGTCATCAACCACAACACCCCCGGGCT...ATTCAGGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp TGGGCCGCCTCCAGTTTGATCTCACACTCTCTTCGCACCACGTTGACCTGTGTGATGGCGTGCACCAGGTaGATGTCGTACTGTGTCACC +
Preference number: 2 (lower is better)
Translates to: WAASSLISHSLRTTLTCVMACTR*MSYCVT
Trigger: GGTGACACAGTACGACATCCACCTGGTGCACGCCAT...CACACAGGTCAACGTGGTGCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CAA 90 bp GCCCAAAATCCCATGGCCATTCGAGCAGCTGGTGTCTGCAAAACTTaGGGCCTGCCTGGTGGAAATGGACATGGTGTTCTGGGCAGACAC +
Preference number: 2 (lower is better)
Translates to: AQNPMAIRAAGVCKT*GLPGGNGHGVLGRH
Trigger: GTGTCTGCCCAGAACACCATGTCCATTTCCACCAGGCAGGCCCAAAGTTTTGCAGACACCAGCTGCTCGAATGGCCATGGGATTTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR-3UTR CCA 90 bp CAGCTGCTTCCGTTTGTTGATCTCCTTCTTTTCGTCAAAGTGGGCCGCCTCCAGTCCTCGTGCTCATCCTaGAAGCGCTGGATCAGGTGG +
Preference number: 2 (lower is better)
Translates to: QLLPFVDLLLFVKVGRLQSSCSS*KRWIRW
Trigger: CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGA...CTGGAGGCGGCCCACTTTGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp TGGCTGGTCAGCTCCACGGGAGGCCACGTCTGTTGCGATCAGGATCCGGTAGATATCATGCACAGAATCTaGCAGGTCTTGCACGTGTTG +
Preference number: 2 (lower is better)
Translates to: WLVSSTGGHVCCDQDPVDIMHRI*QVLHVL
Trigger: CAACACGTGCAAGACCTGCCAGATTCTGTGCATGAT...ATCTACCGGATCCTGATCGCAACAGACGTGGCCTCCCGTGGAGCTGACCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595858.5
3UTR-3UTR TCA 90 bp GAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGAACCAGGTAGGCGTCCTTaGCCTTCTCAGGCACCAGCA +
Preference number: 2 (lower is better)
Translates to: EFAQHHAQNLAGLARVGEPGRRP*PSQAPA
Trigger: TGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGG...TTCACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp GCTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: AEFAQHHAQNLAGLARVGRRRAG*WPDPAA
Trigger: AGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT...ACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CCA 90 bp TGGCAGGTCTTGCACGTGTTGGTGAAGATGATAATGGACCAGTCCTCGTGCTCAGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: WQVLHVLVKMIMDQSSCSGDDHV*FPRELQ
Trigger: CTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCC...TGAGCACGAGGACTGGTCCATTATCATCTTCACCAACACGTGCAAGACCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602113.5
3UTR CAA 90 bp TTCTGCTTCATCATGGAGTGCAGAGCCACGGTGGGGAAGCTGAATTaGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTG +
Preference number: 2 (lower is better)
Translates to: FCFIMECRATVGKLN*RSIMHRIWQVLHVL
Trigger: CAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCACCGTGGCTCTGCACTCCATGATGAAGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR GCA 90 bp GATCTTCTTTATACTAAAAGTGTTGGAGCTGCGCAGGTGATCTGCCAGGCGCCCTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 2 (lower is better)
Translates to: DLLYTKSVGAAQVICQAPFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...GGGCGCCTGGCAGATCACCTGCGCAGCTCCAACACTTTTAGTATAAAGAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR-3UTR CCA 90 bp ACGTTGACCTGTGTGAGGATCTGTAGCACCTCGGCCTCTTCCACGGAGAACTCCATCATGCACAGAATCTaGCAGGTCTTGCACGTGTTG +
Preference number: 2 (lower is better)
Translates to: TLTCVRICSTSASSTENSIMHRI*QVLHVL
Trigger: CAACACGTGCAAGACCTGCCAGATTCTGTGCATGAT...GGAGTTCTCCGTGGAAGAGGCCGAGGTGCTACAGATCCTCACACAGGTCAACGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR GCA 72 bp GAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTaGTGTGGGGCACTGGGTAGGCCCCCGGGAAGGGCT +
Preference number: 3 (lower is better)
Translates to: EQGPHNTSAHGF*CGALGRPPGRA
Trigger: AGCCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 72 bp CCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTaGACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCG +
Preference number: 3 (lower is better)
Translates to: PAAPGVCRSAWR*TAVSACGPAQP
Trigger: CGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 72 bp AGGGGACTGGGCCTGAGTGGGACCCAGACGGTGTCCTaGGTGGACGCCCCTTGTGGCCAGCCCTGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: RGLGLSGTQTVS*VDAPCGQPCQP
Trigger: AGGCTGGCAGGGCTGGCCACAAGGGGCGTCCACCCAGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR GCA 72 bp AGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCC +
Preference number: 3 (lower is better)
Translates to: SVSVSVALNSSV*LRAGTAARMAS
Trigger: GGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CAA 90 bp GTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGGGGGTGACCTTGGGTaGGGGTCACAACCTCCCGGT +
Preference number: 3 (lower is better)
Translates to: VSGQRSRARTTRAPTGSAGGDLG*GSQPPG
Trigger: ACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCCC...AGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 72 bp CCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTG +
Preference number: 3 (lower is better)
Translates to: PAQPPGWPPGPR*SQCSPVPAAGL
Trigger: CAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 72 bp TGCGCAGGTGATCTGCCAGGCGCCCCGGCGTGGCGATaGCCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCT +
Preference number: 3 (lower is better)
Translates to: CAGDLPGAPAWR*PRVVSERAPAP
Trigger: AGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR TCA 72 bp AGGTGGATGTCGTACTGTGTCACCAGCGTGATGGCCTaGCCCTGCCGCCCTGCACGGGCCGTCCGGCCGACT +
Preference number: 3 (lower is better)
Translates to: RWMSYCVTSVMA*PCRPARAVRPT
Trigger: AGTCGGCCGGACGGCCCGTGCAGGGCGGCAGGGTCAGGCCATCACGCTGGTGACACAGTACGACATCCACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 72 bp CGTGCACCAGGTGGATGTCGTACTGTGTCACCAGCGTaGTGGCCTGACCCTGCCGCCCTGCACGGGCCGTCC +
Preference number: 3 (lower is better)
Translates to: RAPGGCRTVSPA*WPDPAALHGPS
Trigger: GGACGGCCCGTGCAGGGCGGCAGGGTCAGGCCATCACGCTGGTGACACAGTACGACATCCACCTGGTGCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 72 bp ATCTGCCAGGCGCCCCGGCGTGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCAT +
Preference number: 3 (lower is better)
Translates to: ICQAPRRGDDHV*FPRELQRLGHH
Trigger: ATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR-3UTR CAA 90 bp GGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGGGGAGCCCGGGGGTGTaGTGGTTGATGACCACCTGT +
Preference number: 3 (lower is better)
Translates to: GKGPASGFGAEEQGPHNTGSPGV*WLMTTC
Trigger: ACAGGTGGTCATCAACCACAACACCCCCGGGCTCCC...CGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR GCA 72 bp GCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTaGAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTG +
Preference number: 3 (lower is better)
Translates to: ASQKKGWLVARP*SSRSVSVSVAL
Trigger: CAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR GCA 72 bp ACGGTGTCCTGGGTGGACGCCCCTTGTGGCCAGCCCTaGCAGCCTTCTGTCGCTTCAGCGTCTCCTCCACCT +
Preference number: 3 (lower is better)
Translates to: TVSWVDAPCGQP*QPSVASASPPP
Trigger: AGGTGGAGGAGACGCTGAAGCGACAGAAGGCTGGCAGGGCTGGCCACAAGGGGCGTCCACCCAGGACACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 72 bp CCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTaGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCA +
Preference number: 3 (lower is better)
Translates to: PGPVLPRRRAGW*PDPAAPGVCRS
Trigger: TGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 72 bp GTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTG +
Preference number: 3 (lower is better)
Translates to: VLTGACASQKKG*LVARPCSSRSV
Trigger: CACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CAA 90 bp AGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGGGGGGTGACCTTGGGTaGGGGTCACAACCTCCCGGT +
Preference number: 3 (lower is better)
Translates to: SRQDGLQVHGEVSAALFQGGDLG*GSQPPG
Trigger: ACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCCC...CTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CAA 90 bp CCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTGGGCCGCCTCCAGTTaGATCTCACACTCTCTTCGC +
Preference number: 3 (lower is better)
Translates to: PVVSGQRSRARTTRAPTGWAASS*ISHSLR
Trigger: GCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCA...ACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 72 bp TCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTaGGCAGATGGCCGTGTGGGGCTCAGACCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: SSDPQLHGRVKD*ADGRVGLRPGP
Trigger: AGGGCCTGGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 72 bp TGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATaGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGG +
Preference number: 3 (lower is better)
Translates to: CPQGRFLRPSAP*TSQGLGRWPCG
Trigger: CCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CAA 90 bp TCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCAGACCAGGCCGGGAGGCCACGTCTGTaGCGATCAGGATCCGGTAGA +
Preference number: 3 (lower is better)
Translates to: SMDESRTGQMAVWGSDQAGRPRL*RSGSGR
Trigger: TCTACCGGATCCTGATCGCAACAGACGTGGCCTCCC...GGCCTGGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 72 bp GGAAGCGCTGGATCAGGTGGACCAGGTAGGCGTCCTTaGCCTTCTCAGGCACCAGCAGGTAGCGCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: GSAGSGGPGRRP*PSQAPAGSAGP
Trigger: TGGACCAGCGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATCCAGCGCTTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 72 bp CCAGCGCCTGGGCCACCATGTCCATGCCACCGACGATaGTGCAGTCTTTCAGCCCTAGAGGCTTCCCCAGGA +
Preference number: 3 (lower is better)
Translates to: PAPGPPCPCHRR*CSLSALEASPG
Trigger: TCCTGGGGAAGCCTCTAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000602113.5
3UTR-3UTR CAA 90 bp TTGATCTTGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCAGGGTCCTTCCCCCCGGGGGTGTTGTGGTaGATGACCACCTGTACCGTA +
Preference number: 3 (lower is better)
Translates to: LILASSALRLASRSGSFPPGVLW*MTTCTV
Trigger: TACGGTACAGGTGGTCATCAACCACAACACCCCCGG...GGGGAAGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCAAGATCAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 72 bp ATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTaGGCCACCATGTCCATGCCACCGACGATGATGCAG +
Preference number: 3 (lower is better)
Translates to: MTTCGFRESSSA*ATMSMPPTMMQ
Trigger: CTGCATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR-3UTR CAA 90 bp TGGGCCGCCTCCAGTTTGATCTCACACTCTCTTCGCACCACGTTGACCTGTGTGGGGAGCCCGGGGGTGTaGTGGTTGATGACCACCTGT +
Preference number: 3 (lower is better)
Translates to: WAASSLISHSLRTTLTCVGSPGV*WLMTTC
Trigger: ACAGGTGGTCATCAACCACAACACCCCCGGGCTCCC...CACACAGGTCAACGTGGTGCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR GCA 72 bp CTTTATACTAAAAGTGTTGGAGCTGCGCAGGTGATCTaGCAGGCGCCCCGGCGTGGCGATGACCACGTGTGG +
Preference number: 3 (lower is better)
Translates to: LYTKSVGAAQVI*QAPRRGDDHVW
Trigger: CCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAACACTTTTAGTATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR GCA 72 bp GTCTCCTCCACCTTCTCCTTGAAGCGCCGGTTCTTCTaGTTGATCTTGGCCAGCTCAGCCTTGCGCTTGGCC +
Preference number: 3 (lower is better)
Translates to: VSSTFSLKRRFF*LILASSALRLA
Trigger: GGCCAAGCGCAAGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGAGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR GCA 72 bp AGGTGGCTGGTCAGCTCCACGGGAGGCCACGTCTGTTaGGATCAGGATCCGGTAGATGCTGGACTTGAACTT +
Preference number: 3 (lower is better)
Translates to: RWLVSSTGGHVC*DQDPVDAGLEL
Trigger: AAGTTCAAGTCCAGCATCTACCGGATCCTGATCGCAACAGACGTGGCCTCCCGTGGAGCTGACCAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595858.5
3UTR GCA 72 bp TTCGGCACAGGACTGACCTCACCAAAGCCTCACAGCTaGCTCTGGAGAGCAGGGCAGTTGCTATGCCCATTC +
Preference number: 3 (lower is better)
Translates to: FGTGLTSPKPHS*LWRAGQLLCPF
Trigger: GAATGGGCATAGCAACTGCCCTGCTCTCCAGAGGCAGCTGTGAGGCTTTGGTGAGGTCAGTCCTGTGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR CCA 72 bp GCACCGGGGCCATCTTGTTTAATTCTGCAGGACCCCTaGTGGGTGTCAGGACGAGGCAGAAGATGCCATAGG +
Preference number: 3 (lower is better)
Translates to: APGPSCLILQDP*WVSGRGRRCHR
Trigger: CCTATGGCATCTTCTGCCTCGTCCTGACACCCACCAGGGGTCCTGCAGAATTAAACAAGATGGCCCCGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593361.5
3UTR CCA 72 bp TCTGGCCAAATTTGGACTTTCATGGCCCCTTCACTCTaGCCACAAACCCCAGATGTGGCCAGGTGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: SGQIWTFMAPSL*PQTPDVARWVA
Trigger: GGCCACCCACCTGGCCACATCTGGGGTTTGTGGCCAGAGTGAAGGGGCCATGAAAGTCCAAATTTGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR-3UTR CAA 90 bp TTCAGCGTCTCCTCCACCTTCTCCTTGAAGCGCCGGTTCTTCTGCTTGATCTTGGGGAGGCCACGTCTGTaGCGATCAGGATCCGGTAGA +
Preference number: 3 (lower is better)
Translates to: FSVSSTFSLKRRFFCLILGRPRL*RSGSGR
Trigger: TCTACCGGATCCTGATCGCAACAGACGTGGCCTCCC...CAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGAGACGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 72 bp ATCTTCTTTATACTAAAAGTGTTGGAGCTGCGCAGGTaGTCTGCCAGGCGCCCCGGCGTGGCGATGACCACG +
Preference number: 3 (lower is better)
Translates to: IFFILKVLELRR*SARRPGVAMTT
Trigger: CGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAACACTTTTAGTATAAAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
3UTR TCA 72 bp CTGGTGGAAATGGACATGGTGTTCTGGGCAGACACCTaGGAAACAACAGCGGCTGCACCCCACCTCTCCTGT +
Preference number: 3 (lower is better)
Translates to: LVEMDMVFWADT*ETTAAAPHLSC
Trigger: ACAGGAGAGGTGGGGTGCAGCCGCTGTTGTTTCTCAGGTGTCTGCCCAGAACACCATGTCCATTTCCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR TCA 72 bp CGCCGGCGCCTTTCCCTGCGTCTTTTTGGGTGCCCCTaGATCCATGTAGCAGTTATAAGCCGCTTGCAGATG +
Preference number: 3 (lower is better)
Translates to: RRRLSLRLFGCP*IHVAVISRLQM
Trigger: CATCTGCAAGCGGCTTATAACTGCTACATGGATTCAGGGGCACCCAAAAAGACGCAGGGAAAGGCGCCGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR GCA 72 bp AGGGCGGCAAAGCGTTCTTTCTGCTTCATCATGGAGTaGAGAGCCACGGTGGGGAAGCTGAATTTGCGCAGC +
Preference number: 3 (lower is better)
Translates to: RAAKRSFCFIME*RATVGKLNLRS
Trigger: GCTGCGCAAATTCAGCTTCCCCACCGTGGCTCTGCACTCCATGATGAAGCAGAAAGAACGCTTTGCCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR GCA 72 bp TCCTCCAGCTTCTTCTTGATCTGCTCCTCGATGGCGTaGACCAGGTGGATGTCGTACTGTGTCACCAGCGTG +
Preference number: 3 (lower is better)
Translates to: SSSFFLICSSMA*TRWMSYCVTSV
Trigger: CACGCTGGTGACACAGTACGACATCCACCTGGTGCACGCCATCGAGGAGCAGATCAAGAAGAAGCTGGAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CAA 90 bp ACGTTGACCTGTGTGAGGATCTGTAGCACCTCGGCCTCTTCCACGGAGAACTCCGTGGGGAAGCTGAATTaGCGCAGCATCATGCACAGA +
Preference number: 3 (lower is better)
Translates to: TLTCVRICSTSASSTENSVGKLN*RSIMHR
Trigger: TCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCAC...GGAGTTCTCCGTGGAAGAGGCCGAGGTGCTACAGATCCTCACACAGGTCAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR TCA 72 bp GCTTCATCATGGAGTGCAGAGCCACGGTGGGGAAGCTaGATTTGCGCAGCATCATGCACAGAATCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: ASSWSAEPRWGS*ICAASCTESGR
Trigger: CCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCACCGTGGCTCTGCACTCCATGATGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR GCA 72 bp CACGTGTTGGTGAAGATGATAATGGACCAGTCCTCGTaGTCATCCTGGAAGCGCTGGATCAGGTGGACCAGG +
Preference number: 3 (lower is better)
Translates to: HVLVKMIMDQSS*SSWKRWIRWTR
Trigger: CCTGGTCCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCATTATCATCTTCACCAACACGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 72 bp CCATGGCCATTCGAGCAGCTGGTGTCTGCAAAACTTTaGGCCTGCCTGGTGGAAATGGACATGGTGTTCTGG +
Preference number: 3 (lower is better)
Translates to: PWPFEQLVSAKL*ACLVEMDMVFW
Trigger: CCAGAACACCATGTCCATTTCCACCAGGCAGGCCCAAAGTTTTGCAGACACCAGCTGCTCGAATGGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR CCA 72 bp CTTCAGGGCCCAAAATCCCATGGCCATTCGAGCAGCTaGTGTCTGCAAAACTTTGGGCCTGCCTGGTGGAAA +
Preference number: 3 (lower is better)
Translates to: LQGPKSHGHSSS*CLQNFGPAWWK
Trigger: TTTCCACCAGGCAGGCCCAAAGTTTTGCAGACACCAGCTGCTCGAATGGCCATGGGATTTTGGGCCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR-3UTR CAA 90 bp ACGTTGACCTGTGTGAGGATCTGTAGCACCTCGGCCTCTTCCACGGAGAACTCCAGAATCTGGCAGGTCTaGCACGTGTTGGTGAAGATG +
Preference number: 3 (lower is better)
Translates to: TLTCVRICSTSASSTENSRIWQV*HVLVKM
Trigger: CATCTTCACCAACACGTGCAAGACCTGCCAGATTCT...GGAGTTCTCCGTGGAAGAGGCCGAGGTGCTACAGATCCTCACACAGGTCAACGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 72 bp CTGCAAAACTTTGGGCCTGCCTGGTGGAAATGGACATaGTGTTCTGGGCAGACACCTGAGAAACAACAGCGG +
Preference number: 3 (lower is better)
Translates to: LQNFGPAWWKWT*CSGQTPEKQQR
Trigger: CCGCTGTTGTTTCTCAGGTGTCTGCCCAGAACACCATGTCCATTTCCACCAGGCAGGCCCAAAGTTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR CCA 72 bp TCTCTGCCTGTCCCCTTGGGCTTAGCCCACATTGTCTaGCCAAATTTGGACTTTCATGGCCCCTTCACTCTG +
Preference number: 3 (lower is better)
Translates to: SLPVPLGLAHIV*PNLDFHGPFTL
Trigger: CAGAGTGAAGGGGCCATGAAAGTCCAAATTTGGCCAGACAATGTGGGCTAAGCCCAAGGGGACAGGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR CCA 72 bp CTTAACATGTCGCCGGCGCCTTTCCCTGCGTCTTTTTaGGTGCCCCTGAATCCATGTAGCAGTTATAAGCCG +
Preference number: 3 (lower is better)
Translates to: LNMSPAPFPASF*VPLNPCSSYKP
Trigger: CGGCTTATAACTGCTACATGGATTCAGGGGCACCCAAAAAGACGCAGGGAAAGGCGCCGGCGACATGTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR-3UTR CAA 90 bp TCCTTCTTTTCGTCAAAGTGGGCCGCCTCCAGTTTGATCTCACACTCTCTTCGCATGCTGGACTTGAACTaGGCTAGGGCGGCAAAGCGT +
Preference number: 3 (lower is better)
Translates to: SFFSSKWAASSLISHSLRMLDLN*ARAAKR
Trigger: ACGCTTTGCCGCCCTAGCCAAGTTCAAGTCCAGCAT...GCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCACTTTGACGAAAAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR-3UTR CAA 90 bp TGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCTGAATAGCTGCTTCCGTTTGTaGATCTCCTTCTTTTCGTCA +
Preference number: 3 (lower is better)
Translates to: WVGVTTSRSCSFFPCSLNSCFRL*ISFFSS
Trigger: TGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCT...ATTCAGGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CCA 72 bp TGCTTCCGTTTGTTGATCTCCTTCTTTTCGTCAAAGTaGGCCGCCTCCAGTTTGATCTCACACTCTCTTCGC +
Preference number: 3 (lower is better)
Translates to: CFRLLISFFSSK*AASSLISHSLR
Trigger: GCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCACTTTGACGAAAAGAAGGAGATCAACAAACGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAAGGGCTGCTGCCCCAGGATGGCGGGGATaGAGCCGAGCTGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: AHGFCCGALGRPPGRAAAPGWRG*SRAARA
Trigger: CGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGG...GGCAGCAGCCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCTTGGAGCTGCGCAGGTaGTCTGCCAGGCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: ALNSSVCLRAGTAARMASLELRR*SARRPG
Trigger: GCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAA...GGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp ACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCAGCTGCGCAGGTGATCTaGCAGGCGCCCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TAVSACGPAQPPGWPPGPAAQVI*QAPRRG
Trigger: GCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGC...TGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp AGGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCTTGGAGCTGCGCAGGTaGTCTGCCAGGCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: RAQGRDQPVVSGQRSRARLELRR*SARRPG
Trigger: GCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAA...GCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp ACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACCAGGATGGCGGGGATaGAGCCGAGCTGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: TAVSACGPAQPPGWPPGPPGWRG*SRAARA
Trigger: CGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGG...TGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGCTGCGCAGGTGATCTaGCAGGCGCCCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RGAGPAQHERPRVLLWGTAAQVI*QAPRRG
Trigger: GCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGC...AGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCAGCCCCGGCGTGGCGATaGCCACGTGTGGTTTCCGAG +
Preference number: 4 (lower is better)
Translates to: GLREGTSQWFRGRGAGPAAPAWR*PRVVSE
Trigger: CTCGGAAACCACACGTGGTCATCGCCACGCCGGGGC...TGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp AGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGCCCCGGCGTGGCGATaGCCACGTGTGGTTTCCGAG +
Preference number: 4 (lower is better)
Translates to: RSRARTTRAPTGSAVGHWAPAWR*PRVVSE
Trigger: CTCGGAAACCACACGTGGTCATCGCCACGCCGGGGC...CCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCTTGGAGCTGCGCAGGTaGTCTGCCAGGCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SRSVSVSVALNSSVCLRALELRR*SARRPG
Trigger: GCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAA...GGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAGGAGGGGACTGGGCCTaGGTGGGACCCAGACGGTGT +
Preference number: 4 (lower is better)
Translates to: HNTSAHGFCCGALGRPPGGGDWA*VGPRRC
Trigger: ACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCTCC...TCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACGGAGGGGACTGGGCCTaGGTGGGACCCAGACGGTGT +
Preference number: 4 (lower is better)
Translates to: QRSRARTTRAPTGSAVGHGGDWA*VGPRRC
Trigger: ACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCTCC...GTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GCGCAGGTGATCTGCCAGGCGCCCCGGCGTGGCGATGACCACGTGTGGTTTCCGACAGCAGTGTCTGCCTaGGGGCCGGCACAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: AQVICQAPRRGDDHVWFPTAVSA*GPAQPP
Trigger: TGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT...CGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594021.5
ENST00000602113.5
CDS-3UTR GCA 90 bp GTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCAGCGCCCACGGGTTCTaGTGTGGGGCACTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: VALNSSVCLRAGTAARMASAHGF*CGALGR
Trigger: CCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCT...GGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp ACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCATCTGCTGTGGGGCACTaGGTAGGCCCCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TAVSACGPAQPPGWPPGPSAVGH*VGPREG
Trigger: CCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGA...TGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCTTCCACGAGCCACGATaGCAGCCCGAGCTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: LPAGRHSRQDGLQVHGEVFHEPR*QPELRE
Trigger: TTCGCGGAGCTCGGGCTGTCATCGTGGCTCGTGGAA...GACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TGCCAGGCGCCCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGGCCCCGGCGTGGCGATaGCCACGTGTGGTTTCCGAG +
Preference number: 4 (lower is better)
Translates to: CQAPRRGDDHVWFPRELQAPAWR*PRVVSE
Trigger: CTCGGAAACCACACGTGGTCATCGCCACGCCGGGGC...CTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR TCA 90 bp AGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGTTGGAGCTGCGCAGGTaGTCTGCCAGGCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSRSVSVSVALNSSVCLRLELRR*SARRPG
Trigger: GCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAA...CCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp AGGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCCGGTCAGCGTGGCGCTaGACAGCAGTGTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RAQGRDQPVVSGQRSRARRSAWR*TAVSAC
Trigger: GCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCG...GCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGACTGTGTCACCAGCGTaGTGGCCTGACCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: QGPHNTSAHGFCCGALGRTVSPA*WPDPAA
Trigger: GGCGGCAGGGTCAGGCCATCACGCTGGTGACACAGT...CCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCAACTGTGTCACCAGCGTaGTGGCCTGACCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLREGTSQWFRGRGAGPATVSPA*WPDPAA
Trigger: GGCGGCAGGGTCAGGCCATCACGCTGGTGACACAGT...TGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAAGGGCTGCTGAGCTCCGCGAAGCCTaGCATCCTTGTGGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SAHGFCCGALGRPPGRAAELREA*HPCGRL
Trigger: CAAGCGGCCACAAGGATGGCAGGCTTCGCGGAGCTC...AGCAGCCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCGAGCTCCGCGAAGCCTaGCATCCTTGTGGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: VALNSSVCLRAGTAARMAELREA*HPCGRL
Trigger: CAAGCGGCCACAAGGATGGCAGGCTTCGCGGAGCTC...GGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGAGCTCCGCGAAGCCTaGCATCCTTGTGGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GAEEQGPHNTSAHGFCCGELREA*HPCGRL
Trigger: CAAGCGGCCACAAGGATGGCAGGCTTCGCGGAGCTC...CCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CCGGGAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACCAGGATGGCGGGGATaGAGCCGAGCTGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: PGRAAAPKEGSSDPQLHGPGWRG*SRAARA
Trigger: CGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGG...TCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCCCAGGATGGCGGGGATaGAGCCGAGCTGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: KGPASGFGAEEQGPHNTSPGWRG*SRAARA
Trigger: CGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGG...GCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGAGCTGCGCAGGTGATCTaGCAGGCGCCCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RVVSERAPAPGPPCPCHRAAQVI*QAPRRG
Trigger: GCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGC...TCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR GCA 90 bp GGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGACAGCAGTGTCTGCCTaGGGGCCGGCACAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GKGPASGFGAEEQGPHNTTAVSA*GPAQPP
Trigger: TGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT...CGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: RSVSVSVALNSSVCLRAGLNSSV*LRAGTA
Trigger: GGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAG...GCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGGCGCCCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: RRPGVAMTTCGFRESSSALNSSV*LRAGTA
Trigger: GGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAG...GGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594021.5
ENST00000602113.5
CDS-3UTR GCA 90 bp TGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCGCCCCCGGGAAGGGCTaGTGCCCCCAAGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: CVGQRGAEQQCLPAGRHSAPGKG*CPQGRF
Trigger: GAACCTTCCTTGGGGGCAGCAGCCCTTCCCGGGGGC...GCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCAGCCTGCCATCCTTGTaGCCGCTTGTAGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VALNSSVCLRAGTAARMASLPSL*PLVGAP
Trigger: AGGGGCCCCTACAAGCGGCCACAAGGATGGCAGGCT...GGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594021.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGCTCGACCCTCCAGGATaGCGGGGATGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: RSRARTTRAPTGSAVGHWLDPPG*RGCSRA
Trigger: AGCTCGGCTGCATCCCCGCCATCCTGGAGGGTCGAG...CCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCTCGACCCTCCAGGATaGCGGGGATGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PECVGQRGAEQQCLPAGRLDPPG*RGCSRA
Trigger: AGCTCGGCTGCATCCCCGCCATCCTGGAGGGTCGAG...CCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTGGTAGGCCAGCTCCCTaGTGGGTGTCAGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: PVVSGQRSRARTTRAPTGGRPAP*WVSGRG
Trigger: GCCTCGTCCTGACACCCACCAGGGAGCTGGCCTACC...ACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000247003.9
ENST00000602113.5
CDS-3UTR TCA 90 bp GCGCAGGTGATCTGCCAGGCGCCCCGGCGTGGCGATGACCACGTGTGGTTTCCGTTCCACGAGCCACGATaGCAGCCCGAGCTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: AQVICQAPRRGDDHVWFPFHEPR*QPELRE
Trigger: TTCGCGGAGCTCGGGCTGTCATCGTGGCTCGTGGAA...CGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR TCA 90 bp CGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCGCCCCGGCGTGGCGATaGCCACGTGTGGTTTCCGAG +
Preference number: 4 (lower is better)
Translates to: RGLCFPEEGLVGGQTLQLAPAWR*PRVVSE
Trigger: CTCGGAAACCACACGTGGTCATCGCCACGCCGGGGC...GAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTTGGAGCTGCGCAGGTaGTCTGCCAGGCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VAMTTCGFRESSSAWATMLELRR*SARRPG
Trigger: GCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAA...CATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR TCA 90 bp CACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCTTGGAGCTGCGCAGGTaGTCTGCCAGGCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: HSRQDGLQVHGEVSAALFLELRR*SARRPG
Trigger: GCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAA...GAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAAGGGCTGCTGCCCCACGGTGGGGAAGCTaGATTTGCGCAGCATCATGC +
Preference number: 4 (lower is better)
Translates to: AHGFCCGALGRPPGRAAAPRWGS*ICAASC
Trigger: GCATGATGCTGCGCAAATTCAGCTTCCCCACCGTGG...GGCAGCAGCCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp ACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCACCAGCGTGATGGCCTaGCCCTGCCGCCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: TAARMASRSTVKSVQPCSTSVMA*PCRPAR
Trigger: CCGTGCAGGGCGGCAGGGTCAGGCCATCACGCTGGT...GGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAAGGAGGGGACTGGGCCTaGGTGGGACCCAGACGGTGT +
Preference number: 4 (lower is better)
Translates to: VGGQTLQLPECVGQRGAEGGDWA*VGPRRC
Trigger: ACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCTCC...TTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGCCAGGATGGCGGGGATaGAGCCGAGCTGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: RMASRSTVKSVQPCSSSRPGWRG*SRAARA
Trigger: CGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGG...CCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCGACCCGGAACTGCTCTaGGATCTGGTAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ARTTRAPTGSAVGHWVGPDPELL*DLVGQL
Trigger: GAGCTGGCCTACCAGATCGCAGAGCAGTTCCGGGTC...GGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGCCTGACCCTGCCGCCCTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATGACCCGGAACTGCTCTaGGATCTGGTAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLTLPPCTGRPADSVDVDDPELL*DLVGQL
Trigger: GAGCTGGCCTACCAGATCGCAGAGCAGTTCCGGGTC...ATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAGGGCGGCAGGGTCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCGCTGCGCAGGTGATCTaGCAGGCGCCCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PQGRFLRPSAPWTSQGLGAAQVI*QAPRRG
Trigger: GCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGC...GCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CCGGGAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGAACAGCAGTGTCTGCCTaGGGGCCGGCACAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PGRAAAPKEGSSDPQLHGTAVSA*GPAQPP
Trigger: TGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT...TCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: CVGQRGAEQQCLPAGRHSLNSSV*LRAGTA
Trigger: GGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAG...GCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGATTGGTGGCCAGACCCTaGAGCTCCCGGAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: HNTSAHGFCCGALGRPPGLVARP*SSRSVS
Trigger: CGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAA...TCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCGCTCACCGGGGCCTGTaGTTCCCAGAAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPASGFGAEEQGPHNTSAAHRGL*FPEEGL
Trigger: CAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGC...GGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAGCTCACCGGGGCCTGTaGTTCCCAGAAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HNTSAHGFCCGALGRPPGAHRGL*FPEEGL
Trigger: CAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGC...TCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGCCCCCGGGAAGGGCTaGTGCCCCCAAGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: EGLVGGQTLQLPECVGQRAPGKG*CPQGRF
Trigger: GAACCTTCCTTGGGGGCAGCAGCCCTTCCCGGGGGC...ACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCGCCCCCGGGAAGGGCTaGTGCCCCCAAGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: RGLCFPEEGLVGGQTLQLAPGKG*CPQGRF
Trigger: GAACCTTCCTTGGGGGCAGCAGCCCTTCCCGGGGGC...GAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGGCCCTGGGAGGGGACTGGGCCTGAGTGGGACCCAGACGGTGTCCTGGGTGGAGCCGGCGCCTTTCCCTaGGTCTTTTTGGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RPWEGTGPEWDPDGVLGGAGAFP*VFLGAP
Trigger: AGGGGCACCCAAAAAGACGCAGGGAAAGGCGCCGGC...TCCACCCAGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCTCCCAGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCGAGAGCTCCAGCGCCTaGGCCACCATGTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: RAQGRDQPVVSGQRSRARESSSA*ATMSMP
Trigger: TGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTC...GCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAAGGGCTGCTGCCAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AHGFCCGALGRPPGRAAARRRAG*WPDPAA
Trigger: AGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT...GGCAGCAGCCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp ACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCAGCTCAGCCTTGCGCTTaGCCTCCAGGTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TAVSACGPAQPPGWPPGPAQPCA*PPGQGP
Trigger: AGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGC...TGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCAAGGACTGGGCAGATaGCCGTGTGGGGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: QGPHNTSAHGFCCGALGRQGLGR*PCGAQT
Trigger: GGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTG...CCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGTATGCGGCACCCCTaGGGGGTGACCTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: AGWWPDPAAPGVCRSAWRCMRHP*GVTLGW
Trigger: CCAACCCAAGGTCACCCCCCAGGGGTGCCGCATACA...GCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CCCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCAGCTTCCTCCAGGATaGCGGGGATGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PRRGDDHVWFPRELQRLGQLPPG*RGCSRA
Trigger: AGCTCGGCTGCATCCCCGCCATCCTGGAGGAAGCTG...GCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000602113.5
CDS-3UTR CCA 90 bp CTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCATTCTGCAGGACCCCTaGTGGGTGTCAGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: LPAGRHSRQDGLQVHGEVILQDP*WVSGRG
Trigger: GCCTCGTCCTGACACCCACCAGGGGTCCTGCAGAAT...GACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595858.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCGGTAGGCCAGCTCCCTaGAGCTCCCAAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRHSRQDGLQVHGEVSAAGRPAP*SSQSAG
Trigger: CCCAGCACTTTGGGAGCTCCAGGGAGCTGGCCTACC...GGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000629999.3
3UTR CAA 72 bp GAGTGGGACCCAGACGGTGTCCTGGGTGGACGCCCCTaGTGGCCAGCCCTGCCAGCCTTCTGTCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EWDPDGVLGGRP*WPALPAFCRFS
Trigger: GCTGAAGCGACAGAAGGCTGGCAGGGCTGGCCACAAGGGGCGTCCACCCAGGACACCGTCTGGGTCCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTTTCCACGAGCCACGATaGCAGCCCGAGCTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: VSGQRSRARTTRAPTGSAFHEPR*QPELRE
Trigger: TTCGCGGAGCTCGGGCTGTCATCGTGGCTCGTGGAA...AGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCACGAGCCACGATaGCAGCCCGAGCTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: RHSRQDGLQVHGEVSAALFHEPR*QPELRE
Trigger: TTCGCGGAGCTCGGGCTGTCATCGTGGCTCGTGGAA...CAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp AGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGGCCCCGGCGTGGCGATaGCCACGTGTGGTTTCCGAG +
Preference number: 4 (lower is better)
Translates to: RMASRSTVKSVQPCSSSRAPAWR*PRVVSE
Trigger: CTCGGAAACCACACGTGGTCATCGCCACGCCGGGGC...CCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCAGACCAGGCCGCCCCGGCGTGGCGATaGCCACGTGTGGTTTCCGAG +
Preference number: 4 (lower is better)
Translates to: SMDESRTGQMAVWGSDQAAPAWR*PRVVSE
Trigger: CTCGGAAACCACACGTGGTCATCGCCACGCCGGGGC...GGCCTGGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCGCCCCGGCGTGGCGATaGCCACGTGTGGTTTCCGAG +
Preference number: 4 (lower is better)
Translates to: HSRQDGLQVHGEVSAALFAPAWR*PRVVSE
Trigger: CTCGGAAACCACACGTGGTCATCGCCACGCCGGGGC...GAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCACCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: AGRHSRQDGLQVHGEVSAPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...TGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: GRHSRQDGLQVHGEVSAAPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...GGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: RAGTAARMASRSTVKSVQPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...CTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACCGGTCAGCGTGGCGCTaGACAGCAGTGTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SGKGPASGFGAEEQGPHNRSAWR*TAVSAC
Trigger: GCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCG...GTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp AGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGCCAGGTAGGCGTCCTTaGCCTTCTCAGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: RSRARTTRAPTGSAVGHWPGRRP*PSQAPA
Trigger: TGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGG...CCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGCCAGGTAGGCGTCCTTaGCCTTCTCAGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: SGQRSRARTTRAPTGSAVPGRRP*PSQAPA
Trigger: TGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGG...CACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCCAGGTAGGCGTCCTTaGCCTTCTCAGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PECVGQRGAEQQCLPAGRPGRRP*PSQAPA
Trigger: TGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGG...CCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCACGGTGGGGAAGCTaGATTTGCGCAGCATCATGC +
Preference number: 4 (lower is better)
Translates to: GPHNTSAHGFCCGALGRPPRWGS*ICAASC
Trigger: GCATGATGCTGCGCAAATTCAGCTTCCCCACCGTGG...GGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACTGTGTCACCAGCGTaGTGGCCTGACCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SGKGPASGFGAEEQGPHNTVSPA*WPDPAA
Trigger: GGCGGCAGGGTCAGGCCATCACGCTGGTGACACAGT...GTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAAGGGCTGCTGCCCCTCCAGCTTCTTCTTaGTCTGCTCCTCGATGGCGT +
Preference number: 4 (lower is better)
Translates to: AHGFCCGALGRPPGRAAAPPASS*SAPRWR
Trigger: ACGCCATCGAGGAGCAGATCAAGAAGAAGCTGGAGG...GGCAGCAGCCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCCCTCCACCTTCTCCTTaGAGCGCCGGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LPAGRHSRQDGLQVHGEVPPPSP*SAGSSA
Trigger: AGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGG...GACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTTGCACGGGCGTGGGCTaGTTCAAACCCAGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: RGAGPAQHERPRVLLWGTCTGVG*FKPSCR
Trigger: TCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCA...AGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGATCCAGGATGGCGGGGATaGAGCCGAGCTGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: WFPRELQRLGHHVHATDDPGWRG*SRAARA
Trigger: CGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGG...ATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR GCA 90 bp TCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGACCCGGAACTGCTCTaGGATCTGGTAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SGQRSRARTTRAPTGSAVDPELL*DLVGQL
Trigger: GAGCTGGCCTACCAGATCGCAGAGCAGTTCCGGGTC...CACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TGCTCCACGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGACAGCAGTGTCTGCCTaGGGGCCGGCACAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: CSTVLTGACASQKKGWLVTAVSA*GPAQPP
Trigger: TGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT...CACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCGTGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GLQVHGEVSAALFQQPVCLNSSV*LRAGTA
Trigger: GGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAG...GCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGTGCTCCTCGATGGCGTaGACCAGGTGGATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: GQRGAEQQCLPAGRHSRQCSSMA*TRWMSY
Trigger: GTACGACATCCACCTGGTGCACGCCATCGAGGAGCA...CTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGACAGGTGTGAGCCACTaGACCGGGGCCATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: AVSACGPAQPPGWPPGPRTGVSH*TGAILF
Trigger: AAACAAGATGGCCCCGGTGCAGTGGCTCACACCTGT...CCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000629999.3
CDS-3UTR CCA 90 bp ATCTGCCAGGCGCCCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCTCGACCCTCCAGGATaGCGGGGATGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: ICQAPRRGDDHVWFPRELLDPPG*RGCSRA
Trigger: AGCTCGGCTGCATCCCCGCCATCCTGGAGGGTCGAG...GAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594021.5
CDS-3UTR CCA 90 bp ACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCCTCGACCCTCCAGGATaGCGGGGATGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: TGACASQKKGWLVARPCSLDPPG*RGCSRA
Trigger: AGCTCGGCTGCATCCCCGCCATCCTGGAGGGTCGAG...GCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCGGTAGGCCAGCTCCCTaGTGGGTGTCAGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: ASRSTVKSVQPCSSSRSAGRPAP*WVSGRG
Trigger: GCCTCGTCCTGACACCCACCAGGGAGCTGGCCTACC...GGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR CCA 90 bp GCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: AGWWPDPAAPGVCRSAWRSQKKG*LVARPC
Trigger: GCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGA...GCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: RAQGRDQPVVSGQRSRARSQKKG*LVARPC
Trigger: GCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGA...GCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGACCCAGACGGTGTCCTaGGTGGACGCCCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SSRSVSVSVALNSSVCLRTQTVS*VDAPCG
Trigger: GCCACAAGGGGCGTCCACCCAGGACACCGTCTGGGT...CCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGCAAGGACTGGGCAGATaGCCGTGTGGGGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: GKGPASGFGAEEQGPHNTQGLGR*PCGAQT
Trigger: GGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTG...CGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGACGAGTCAAGGACTaGGCAGATGGCCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGAGPAQHERPRVLLWGTGRVKD*ADGRVG
Trigger: CCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCC...AGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CTGACCCTGCCGCCCTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATCTTGGACGAGTCAAGGACTaGGCAGATGGCCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LTLPPCTGRPADSVDVDLGRVKD*ADGRVG
Trigger: CCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCC...AAGATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAGGGCGGCAGGGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCTCTGCTGTGGGGCACTaGGTAGGCCCCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: DPQLHGRVKDWADGRVGLSAVGH*VGPREG
Trigger: CCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGA...GAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TGCTCCACGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGTCTGCTGTGGGGCACTaGGTAGGCCCCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: CSTVLTGACASQKKGWLVSAVGH*VGPREG
Trigger: CCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGA...CACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCGTGGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGGGGGTGACCTTGGGTTaGGGTCACAACCTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: GGQTLQLPECVGQRGAEQGVTLG*GHNLPV
Trigger: GACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCC...CTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGCCAGATGTGGCCAGGTaGGTGGCCAGGGAAGCTTAT +
Preference number: 4 (lower is better)
Translates to: GAEEQGPHNTSAHGFCCGPDVAR*VAREAY
Trigger: ATAAGCTTCCCTGGCCACCCACCTGGCCACATCTGG...CCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR TCA 90 bp TGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGACCAGCGTGATGGCCTaGCCCTGCCGCCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: CPQGRFLRPSAPWTSQGLTSVMA*PCRPAR
Trigger: CCGTGCAGGGCGGCAGGGTCAGGCCATCACGCTGGT...CAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TTGGGGAGCCCGGGGGTGTTGTGGTTGATGACCACCTGTACCGTAGGGATGTCCACCAGCGTGATGGCCTaGCCCTGCCGCCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: LGSPGVLWLMTTCTVGMSTSVMA*PCRPAR
Trigger: CCGTGCAGGGCGGCAGGGTCAGGCCATCACGCTGGT...GGACATCCCTACGGTACAGGTGGTCATCAACCACAACACCCCCGGGCTCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAACTGTGTCACCAGCGTaGTGGCCTGACCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLLPPRKVPPTLSSMDESTVSPA*WPDPAA
Trigger: GGCGGCAGGGTCAGGCCATCACGCTGGTGACACAGT...TGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCCTCCAGCTTCTTCTTaGTCTGCTCCTCGATGGCGT +
Preference number: 4 (lower is better)
Translates to: ARTTRAPTGSAVGHWVGPPPASS*SAPRWR
Trigger: ACGCCATCGAGGAGCAGATCAAGAAGAAGCTGGAGG...GGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp AGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGGGCCGCCTCCAGTTTaGTCTCACACTCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: RSRARTTRAPTGSAVGHWGPPPV*SHTLFA
Trigger: TGCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCC...CCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp ACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCAGGGCCGCCTCCAGTTTaGTCTCACACTCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: TAVSACGPAQPPGWPPGPGPPPV*SHTLFA
Trigger: TGCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCC...TGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCAGGGCCGCCTCCAGTTTaGTCTCACACTCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: GLREGTSQWFRGRGAGPAGPPPV*SHTLFA
Trigger: TGCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCC...TGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GCCAGGCGCCCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCGGTTCTTCTGCTTaGTCTTGGCCAGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ARRPGVAMTTCGFRESSSAGSSA*SWPAQP
Trigger: AGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGC...GCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR TCA 90 bp CCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCGGAGGGGACTGGGCCTaGGTGGGACCCAGACGGTGT +
Preference number: 4 (lower is better)
Translates to: PQGRFLRPSAPWTSQGLGGGDWA*VGPRRC
Trigger: ACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCTCC...GCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACGAGCTCCGCGAAGCCTaGCATCCTTGTGGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SGKGPASGFGAEEQGPHNELREA*HPCGRL
Trigger: CAAGCGGCCACAAGGATGGCAGGCTTCGCGGAGCTC...GTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGGAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGTGCACGGGCGTGGGCTaGTTCAAACCCAGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: GKGCCPQGRFLRPSAPWTCTGVG*FKPSCR
Trigger: TCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCA...CGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAAGGGCTGCTGCCGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: AHGFCCGALGRPPGRAAAGRGRR*HRDPQT
Trigger: TGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCC...GGCAGCAGCCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: ALNSSVCLRAGTAARMASFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...GGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TTGATCTTGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCAGGGTCCTTCCCCACAGCAGTGTCTGCCTaGGGGCCGGCACAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LILASSALRLASRSGSFPTAVSA*GPAQPP
Trigger: TGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT...GGGGAAGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCAAGATCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: QDGLQVHGEVSAALFQQPLNSSV*LRAGTA
Trigger: GGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAG...CGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGATGGACCAGTCCTCGTaGTCATCCTGGAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SGQRSRARTTRAPTGSAVMDQSS*SSWKRW
Trigger: CCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCAT...CACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTCCTTGTGGCCAGCCCTaGCAGCCTTCTGTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: FGAEEQGPHNTSAHGFCCPCGQP*QPSVAS
Trigger: TGAAGCGACAGAAGGCTGGCAGGGCTGGCCACAAGG...ACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGAGCGCCCACGGGTTCTaGTGTGGGGCACTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LCFPEEGLVGGQTLQLPESAHGF*CGALGR
Trigger: CCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCT...CTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCCGAGCTGCACGGGCGTaGGCTGCTTCAAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: KGPASGFGAEEQGPHNTSRAARA*AASNPA
Trigger: AGCTGGGTTTGAAGCAGCCCACGCCCGTGCAGCTCG...GCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCTCGACCCTCCAGGATaGCGGGGATGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: RQDGLQVHGEVSAALFQQLDPPG*RGCSRA
Trigger: AGCTCGGCTGCATCCCCGCCATCCTGGAGGGTCGAG...CTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GTTGGAGCTGCGCAGGTGATCTGCCAGGCGCCCCGGCGTGGCGATGACCACGTGGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VGAAQVICQAPRRGDDHVGDDHV*FPRELQ
Trigger: CTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCC...CACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR CCA 90 bp TGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: CVGQRGAEQQCLPAGRHSSQKKG*LVARPC
Trigger: GCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGA...GCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGAGCCCGGGGGTGTTGTaGTTGATGACCACCTGTACC +
Preference number: 4 (lower is better)
Translates to: SGQRSRARTTRAPTGSAVSPGVL*LMTTCT
Trigger: GGTACAGGTGGTCATCAACCACAACACCCCCGGGCT...CACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTACCCAGACGGTGTCCTaGGTGGACGCCCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: QTLQLPECVGQRGAEQQCTQTVS*VDAPCG
Trigger: GCCACAAGGGGCGTCCACCCAGGACACCGTCTGGGT...ACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTGGGACTGGGCCTGAGTaGGACCCAGACGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QTLQLPECVGQRGAEQQCGTGPE*DPDGVL
Trigger: CAGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCC...ACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CCGGCCGACTCGGTGGATGTAGATCTTGGGGAGCCCGGGGGTGTTGTGGTTGATGGGCAGATGGCCGTGTaGGGCTCAGACCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PADSVDVDLGEPGGVVVDGQMAV*GSDQAL
Trigger: CAGGGCCTGGTCTGAGCCCCACACGGCCATCTGCCC...ATCAACCACAACACCCCCGGGCTCCCCAAGATCTACATCCACCGAGTCGGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGGACGAGTCAAGGACTaGGCAGATGGCCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: REGTSQWFRGRGAGPAQHGRVKD*ADGRVG
Trigger: CCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCC...GTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGAAGGGACCAGCCAGTaGTTTCGGGGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SRSVSVSVALNSSVCLRAEGTSQ*FRGRGA
Trigger: TGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTC...GGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CCGGGAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGAGGGGTGACCTTGGGTTaGGGTCACAACCTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: PGRAAAPKEGSSDPQLHGGVTLG*GHNLPV
Trigger: GACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCC...TCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTTGTATGCGGCACCCCTaGGGGGTGACCTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: EGLVGGQTLQLPECVGQRCMRHP*GVTLGW
Trigger: CCAACCCAAGGTCACCCCCCAGGGGTGCCGCATACA...ACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGGGACTGGGCCTGAGTGGGACCCAGACGGTGTCCTGGGTGGACGCCCCTTGTATTCTGCAGGACCCCTaGTGGGTGTCAGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: RGLGLSGTQTVSWVDAPCILQDP*WVSGRG
Trigger: GCCTCGTCCTGACACCCACCAGGGGTCCTGCAGAAT...ACAAGGGGCGTCCACCCAGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000595858.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGGGCCACCATGTCTaGTGGGTGTCAGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: GAHRGLCFPEEGLVGGQTLGHHV*WVSGRG
Trigger: GCCTCGTCCTGACACCCACCAGACATGGTGGCCCAG...GGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598972.5
CDS-3UTR CCA 90 bp AGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGGAGAGCTCCAGCGCCTaGGCCACCATGTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SRQDGLQVHGEVSAALFQESSSA*ATMSGG
Trigger: CCCACCAGACATGGTGGCCCAGGCGCTGGAGCTCTC...CTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598972.5
CDS-3UTR TCA 90 bp GTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTTCCACGAGCCACGATaGCAGCCCGAGCTCCGCGAA +
Preference number: 4 (lower is better)
Translates to: VAMTTCGFRESSSAWATMFHEPR*QPELRE
Trigger: TTCGCGGAGCTCGGGCTGTCATCGTGGCTCGTGGAA...CATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR TCA 90 bp CAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACCCATGCCACCGACGATaGTGCAGTCTTTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: QRSRARTTRAPTGSAVGHPCHRR*CSLSAL
Trigger: TAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGG...GTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CGCCCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGCCATGCCACCGACGATaGTGCAGTCTTTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: RPGVAMTTCGFRESSSAWPCHRR*CSLSAL
Trigger: TAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGG...CCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR TCA 90 bp GGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACCATGCCACCGACGATaGTGCAGTCTTTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: GLREGTSQWFRGRGAGPAPCHRR*CSLSAL
Trigger: TAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGG...TGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCACCATGCCACCGACGATaGTGCAGTCTTTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: AGRHSRQDGLQVHGEVSAPCHRR*CSLSAL
Trigger: TAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGG...TGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GTTGGAGCTGCGCAGGTGATCTGCCAGGCGCCCCGGCGTGGCGATGACCACGTGCCTCCAGCTTCTTCTTaGTCTGCTCCTCGATGGCGT +
Preference number: 4 (lower is better)
Translates to: VGAAQVICQAPRRGDDHVPPASS*SAPRWR
Trigger: ACGCCATCGAGGAGCAGATCAAGAAGAAGCTGGAGG...CACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR TCA 90 bp GGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGGCCGGTTCTTCTGCTTaGTCTTGGCCAGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GQTLQLPECVGQRGAEQQAGSSA*SWPAQP
Trigger: AGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGC...CTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGATGCACGGGCGTGGGCTaGTTCAAACCCAGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: VVSERAPAPGPPCPCHRRCTGVG*FKPSCR
Trigger: TCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCA...TCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR GCA 90 bp TCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGTGCACGGGCGTGGGCTaGTTCAAACCCAGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: SDPQLHGRVKDWADGRVGCTGVG*FKPSCR
Trigger: TCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCA...CCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGCACGGGCGTGGGCTaGTTCAAACCCAGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LCFPEEGLVGGQTLQLPECTGVG*FKPSCR
Trigger: TCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCA...CTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: PECVGQRGAEQQCLPAGRFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...CCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGCTGAACAGCAGTGTCTaGCTGCGGGCCGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: RFLRPSAPWTSQGLGRWPLNSSV*LRAGTA
Trigger: GGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAG...CGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCTTGGTGGCCAGACCCTaGAGCTCCCGGAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: HSRQDGLQVHGEVSAALFLVARP*SSRSVS
Trigger: CGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAA...GAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTGCTTCATCATGGAGTaGAGAGCCACGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PVVSGQRSRARTTRAPTGCFIME*RATVGK
Trigger: CTTCCCCACCGTGGCTCTGCACTCCATGATGAAGCA...ACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTTGCTCCTCGATGGCGTaGACCAGGTGGATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: FGAEEQGPHNTSAHGFCCCSSMA*TRWMSY
Trigger: GTACGACATCCACCTGGTGCACGCCATCGAGGAGCA...ACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGCCGTCCGGCCGACTCGGTGGATGTAGATCTTGGGGAGCCCGGGGGTGTTGTGTGCTCCTCGATGGCGTaGACCAGGTGGATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: GRPADSVDVDLGEPGGVVCSSMA*TRWMSY
Trigger: GTACGACATCCACCTGGTGCACGCCATCGAGGAGCA...CACAACACCCCCGGGCTCCCCAAGATCTACATCCACCGAGTCGGCCGGACGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTGGCCAGCTCAGCCTTaGGCTTGGCCTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: EGLLPPRKVPPTLSSMDEWPAQP*AWPPGQ
Trigger: CTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCA...CTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCAAGCGCCGGTTCTTCTaGTTGATCTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ARTTRAPTGSAVGHWVGPKRRFF*LILASS
Trigger: TGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTT...GGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAAGCGCCCACGGGTTCTaGTGTGGGGCACTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GCCPQGRFLRPSAPWTSQSAHGF*CGALGR
Trigger: CCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCT...TTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTCCTCTCCTGTCCCCCTaGTCTTCGAAAGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: PVVSGQRSRARTTRAPTGPLLSP*SSKVRL
Trigger: CAGTCTGACTTTCGAAGAGCAGGGGGACAGGAGAGG...ACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp GGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GKGPASGFGAEEQGPHNTGDDHV*FPRELQ
Trigger: CTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCC...CGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVGGQTLQLPECVGQRGAGDDHV*FPRELQ
Trigger: CTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCC...AGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SRSVSVSVALNSSVCLRARRRAG*WPDPAA
Trigger: AGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT...GGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: KGPASGFGAEEQGPHNTSSQKKG*LVARPC
Trigger: GCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGA...GCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTCCTCGTGCTCATCCTaGAAGCGCTGGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GQTLQLPECVGQRGAEQQSSCSS*KRWIRW
Trigger: CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGA...CTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCAGCCCGGGGGTGTTGTaGTTGATGACCACCTGTACC +
Preference number: 4 (lower is better)
Translates to: SRSVSVSVALNSSVCLRASPGVL*LMTTCT
Trigger: GGTACAGGTGGTCATCAACCACAACACCCCCGGGCT...GGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGACGGTGTCCTGGGTaGACGCCCCTTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQGRFLRPSAPWTSQGLGRRCPG*TPLVAS
Trigger: GCTGGCCACAAGGGGCGTCCACCCAGGACACCGTCT...GCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGGGGGTGACCTTGGGTTaGGGTCACAACCTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: SDPQLHGRVKDWADGRVGGVTLG*GHNLPV
Trigger: GACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCC...CCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGA
64% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGGGGGTGACCTTGGGTTaGGGTCACAACCTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: EGLLPPRKVPPTLSSMDEGVTLG*GHNLPV
Trigger: GACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCC...CTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCTTGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCAGGGTCCTTCCCCTCCATGTATGCGGCACCCCTaGGGGGTGACCTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SWPAQPCAWPPGQGPSPPCMRHP*GVTLGW
Trigger: CCAACCCAAGGTCACCCCCCAGGGGTGCCGCATACA...TGGAGGGGAAGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCATTCTGCAGGACCCCTaGTGGGTGTCAGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: GLQVHGEVSAALFQQPVCILQDP*WVSGRG
Trigger: GCCTCGTCCTGACACCCACCAGGGGTCCTGCAGAAT...GCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000595858.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCGGTAGGCCAGCTCCCTaGAGCTCCCAAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSRQDGLQVHGEVSAALFGRPAP*SSQSAG
Trigger: CCCAGCACTTTGGGAGCTCCAGGGAGCTGGCCTACC...GAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGGGTAGGCCAGCTCCCTaGAGCTCCCAAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VAMTTCGFRESSSAWATMGRPAP*SSQSAG
Trigger: CCCAGCACTTTGGGAGCTCCAGGGAGCTGGCCTACC...CATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000594021.5
CDS-3UTR CCA 90 bp AGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGGGTAGGCCAGCTCCCTaGAGCTCCCAAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RMASRSTVKSVQPCSSSRGRPAP*SSQSAG
Trigger: CCCAGCACTTTGGGAGCTCCAGGGAGCTGGCCTACC...CCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCTGCCTGGTGGAAATaGACATGGTGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGPHNTSAHGFCCGALGRPAWWK*TWCSGQ
Trigger: CTGCCCAGAACACCATGTCCATTTCCACCAGGCAGG...CCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCATGGCCCCTTCACTCTaGCCACAAACCCCAGATGTG +
Preference number: 4 (lower is better)
Translates to: RAQGRDQPVVSGQRSRARMAPSL*PQTPDV
Trigger: CACATCTGGGGTTTGTGGCCAGAGTGAAGGGGCCAT...GCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR TCA 90 bp GTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGCCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: VLPRRRAGWWPDPAAPGVPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...CACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGCCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LCFPEEGLVGGQTLQLPEPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...CTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGATGATCGGTCAGCGTGGCGCTaGACAGCAGTGTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: FPRELQRLGHHVHATDDDRSAWR*TAVSAC
Trigger: GCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCG...ATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594021.5
ENST00000602113.5
CDS-3UTR TCA 90 bp GTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGGTAGATGCTGGACTTaGACTTGGCTAGGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: VSGQRSRARTTRAPTGSAGRCWT*TWLGRQ
Trigger: TTGCCGCCCTAGCCAAGTTCAAGTCCAGCATCTACC...AGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGTAGATGCTGGACTTaGACTTGGCTAGGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: FGAEEQGPHNTSAHGFCCGRCWT*TWLGRQ
Trigger: TTGCCGCCCTAGCCAAGTTCAAGTCCAGCATCTACC...ACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CCGGGAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGAGGGCCGCCTCCAGTTTaGTCTCACACTCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: PGRAAAPKEGSSDPQLHGGPPPV*SHTLFA
Trigger: TGCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCC...TCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACCCTCCACCTTCTCCTTaGAGCGCCGGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LVARPCSSRSVSVSVALNPPPSP*SAGSSA
Trigger: AGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGG...GTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCTCATCTGCACGGGCGTGGGCTaGTTCAAACCCAGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: QVHGEVSAALFQQPVCLICTGVG*FKPSCR
Trigger: TCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCA...GATGAGGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: RSVSVSVALNSSVCLRAGGRGRR*HRDPQT
Trigger: TGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCC...GCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGACCCGGAACTGCTCTaGGATCTGGTAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QDGLQVHGEVSAALFQQPDPELL*DLVGQL
Trigger: GAGCTGGCCTACCAGATCGCAGAGCAGTTCCGGGTC...CGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCAGACTTGGTGGCCAGACCCTaGAGCTCCCGGAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: LSSMDESRTGQMAVWGSDLVARP*SSRSVS
Trigger: CGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAA...GTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACCCCTCCAGGATCAGCTaGTTCCGTTTGTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: QRSRARTTRAPTGSAVGHPSRIS*FRLLIS
Trigger: GGAGATCAACAAACGGAAGCAGCTGATCCTGGAGGG...GTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGCCCTCCAGGATCAGCTaGTTCCGTTTGTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: RSRARTTRAPTGSAVGHWPSRIS*FRLLIS
Trigger: GGAGATCAACAAACGGAAGCAGCTGATCCTGGAGGG...CCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCCCCTCCAGGATCAGCTaGTTCCGTTTGTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: AGWWPDPAAPGVCRSAWRPSRIS*FRLLIS
Trigger: GGAGATCAACAAACGGAAGCAGCTGATCCTGGAGGG...GCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGCTGGTCCAGCTGCTCCACGGTTGGCCAGCTCAGCCTTaGGCTTGGCCTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: VLDLLRHQQVALVQLLHGWPAQP*AWPPGQ
Trigger: CTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCA...ACCGTGGAGCAGCTGGACCAGCGCTACCTGCTGGTGCCTGAGAAGGTCAAGGAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAAAGCGCCGGTTCTTCTaGTTGATCTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HNTSAHGFCCGALGRPPGKRRFF*LILASS
Trigger: TGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTT...TCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCACCTTGTGGCCAGCCCTaGCAGCCTTCTGTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: SPGPVLPRRRAGWWPDPAPCGQP*QPSVAS
Trigger: TGAAGCGACAGAAGGCTGGCAGGGCTGGCCACAAGG...TGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGCCTTGTGGCCAGCCCTaGCAGCCTTCTGTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: RMASRSTVKSVQPCSSSRPCGQP*QPSVAS
Trigger: TGAAGCGACAGAAGGCTGGCAGGGCTGGCCACAAGG...CCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCAGAAACAACAGCGGCTaGACCCCACCTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GAHRGLCFPEEGLVGGQTRNNSG*TPPLLS
Trigger: GGACAGGAGAGGTGGGGTGCAGCCGCTGTTGTTTCT...GGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp AGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGACAGCTTCTGCAAGATaGGAAGGACAAACGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSVCLRAGTAARMASRSTTASAR*EGQTLL
Trigger: CAGCAGCGTTTGTCCTTCCCATCTTGCAGAAGCTGT...CGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGATGATGGAGAGCTCCAGCGCCTaGGCCACCATGTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: FRESSSAWATMSMPPTMMESSSA*ATMSMP
Trigger: TGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTC...CATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR CCA 90 bp TTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVARPCSSRSVSVSVALNGDDHV*FPRELQ
Trigger: CTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCC...GTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGLVGGQTLQLPECVGQRRRRAG*WPDPAA
Trigger: AGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT...ACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGKGPASGFGAEEQGPHNRRRAG*WPDPAA
Trigger: AGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT...GTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACTCCTCGTGCTCATCCTaGAAGCGCTGGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: REGTSQWFRGRGAGPAQHSSCSS*KRWIRW
Trigger: CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGA...GTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCTCCTCGTGCTCATCCTaGAAGCGCTGGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ASRSTVKSVQPCSSSRSASSCSS*KRWIRW
Trigger: CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGA...GGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGCTTTCTGCTTCATCATaGAGTGCAGAGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: SGQRSRARTTRAPTGSAVLSASS*SAEPRW
Trigger: CCACCGTGGCTCTGCACTCCATGATGAAGCAGAAAG...CACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGCGCCCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCCTTTCTGCTTCATCATaGAGTGCAGAGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: RRPGVAMTTCGFRESSSALSASS*SAEPRW
Trigger: CCACCGTGGCTCTGCACTCCATGATGAAGCAGAAAG...GGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR CCA 90 bp TTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTATGGCGTGCACCAGGTaGATGTCGTACTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: FGAEEQGPHNTSAHGFCCMACTR*MSYCVT
Trigger: GGTGACACAGTACGACATCCACCTGGTGCACGCCAT...ACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GATCAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGAGACGGTGTCCTGGGTaGACGCCCCTTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DQVDQVGVLDLLRHQQVARRCPG*TPLVAS
Trigger: GCTGGCCACAAGGGGCGTCCACCCAGGACACCGTCT...CGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGGACTGGGCCTGAGTaGGACCCAGACGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CPQGRFLRPSAPWTSQGLGTGPE*DPDGVL
Trigger: CAGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCC...CAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CTGGATCAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAGGGCAGATGGCCGTGTaGGGCTCAGACCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LDQVDQVGVLDLLRHQQVGQMAV*GSDQAL
Trigger: CAGGGCCTGGTCTGAGCCCCACACGGCCATCTGCCC...TACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGTCTGCTGTGGGGCACTaGGTAGGCCCCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RKVPPTLSSMDESRTGQMSAVGH*VGPREG
Trigger: CCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGA...CATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCAGACCAGGCCGAAGGGACCAGCCAGTaGTTTCGGGGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SMDESRTGQMAVWGSDQAEGTSQ*FRGRGA
Trigger: TGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTC...GGCCTGGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGGAAGGGACCAGCCAGTaGTTTCGGGGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: EGLLPPRKVPPTLSSMDEEGTSQ*FRGRGA
Trigger: TGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTC...CTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTATGCGGCACCCCTaGGGGGTGACCTTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RFLRPSAPWTSQGLGRWPCMRHP*GVTLGW
Trigger: CCAACCCAAGGTCACCCCCCAGGGGTGCCGCATACA...CGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp ATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTCAGCTTCCTCCAGGATaGCGGGGATGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: MASRSTVKSVQPCSSSRSQLPPG*RGCSRA
Trigger: AGCTCGGCTGCATCCCCGCCATCCTGGAGGAAGCTG...AGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000602113.5
CDS-3UTR CCA 90 bp ACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCGGCCACCATGTCTGGTaGGTGTCAGGACGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TAARMASRSTVKSVQPCSGHHVW*VSGRGR
Trigger: TCTGCCTCGTCCTGACACCCACCAGACATGGTGGCC...GGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598972.5
CDS-3UTR TCA 90 bp CTGGATCAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTACGGTCAGCGTGGCGCTaGACAGCAGTGTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LDQVDQVGVLDLLRHQQVRSAWR*TAVSAC
Trigger: GCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCG...TACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATCCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACGGTAGATGCTGGACTTaGACTTGGCTAGGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: SGKGPASGFGAEEQGPHNGRCWT*TWLGRQ
Trigger: TTGCCGCCCTAGCCAAGTTCAAGTCCAGCATCTACC...GTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCGGTAGATGCTGGACTTaGACTTGGCTAGGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: ASRSTVKSVQPCSSSRSAGRCWT*TWLGRQ
Trigger: TTGCCGCCCTAGCCAAGTTCAAGTCCAGCATCTACC...GGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TGTAGCACCTCGGCCTCTTCCACGGAGAACTCCTCCAGCTTCTTCTTGATCTGCACCAGCGTGATGGCCTaGCCCTGCCGCCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: CSTSASSTENSSSFFLICTSVMA*PCRPAR
Trigger: CCGTGCAGGGCGGCAGGGTCAGGCCATCACGCTGGT...GCAGATCAAGAAGAAGCTGGAGGAGTTCTCCGTGGAAGAGGCCGAGGTGCTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGKGPASGFGAEEQGPHNFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...GTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: ASRSTVKSVQPCSSSRSAFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...GGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGCTCACCGGGGCCTGTaGTTCCCAGAAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPPRKVPPTLSSMDESRTAHRGL*FPEEGL
Trigger: CAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGC...AGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCTCATCCATCGCTCACCGGGGCCTGTaGTTCCCAGAAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: STVKSVQPCSSSRSASSIAHRGL*FPEEGL
Trigger: CAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGC...GATGGATGAGGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGATTTGCGCAGCATCATaGACAGAATCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GAEEQGPHNTSAHGFCCGICAAS*TESGRS
Trigger: AGACCTGCCAGATTCTGTGCATGATGCTGCGCAAAT...CCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GCTCCACGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGTGCTTCATCATGGAGTaGAGAGCCACGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: APRCSPGPVLPRRRAGWWCFIME*RATVGK
Trigger: CTTCCCCACCGTGGCTCTGCACTCCATGATGAAGCA...CCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCGTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACATGCTTCATCATGGAGTaGAGAGCCACGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SVSVSVALNSSVCLRAGTCFIME*RATVGK
Trigger: CTTCCCCACCGTGGCTCTGCACTCCATGATGAAGCA...TGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCAGACCAGGCCTGCTCCTCGATGGCGTaGACCAGGTGGATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: SMDESRTGQMAVWGSDQACSSMA*TRWMSY
Trigger: GTACGACATCCACCTGGTGCACGCCATCGAGGAGCA...GGCCTGGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TGCCAGGCGCCCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCCCTCCAGGATCAGCTaGTTCCGTTTGTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: CQAPRRGDDHVWFPRELQPSRIS*FRLLIS
Trigger: GGAGATCAACAAACGGAAGCAGCTGATCCTGGAGGG...CTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR GCA 90 bp CTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTAAGCGCCGGTTCTTCTaGTTGATCTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVGGQTLQLPECVGQRGAKRRFF*LILASS
Trigger: TGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTT...AGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp ACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCTGCCCCCGGGAAGGGCTaGTGCCCCCAAGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: TLGWGHNLPVMFFLPLQPAPGKG*CPQGRF
Trigger: GAACCTTCCTTGGGGGCAGCAGCCCTTCCCGGGGGC...AGGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CTGACCCTGCCGCCCTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATCTTGGAGAGCAGGGCAGTTaGTATGCCCATTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LTLPPCTGRPADSVDVDLGEQGS*YAHSPD
Trigger: ATCTGGAGAATGGGCATAGCAACTGCCCTGCTCTCC...AAGATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAGGGCGGCAGGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR GCA 90 bp CTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCCAAAGCCTCACAGCTaGCTCTGGAGAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LPRRRAGWWPDPAAPGVCPKPHS*LWRAGQ
Trigger: CTGCCCTGCTCTCCAGAGGCAGCTGTGAGGCTTTGG...ACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp AGCGCCTGGGCCACCATGTCCATGCCACCGACGATGATGCAGTCTTTCAGCCCTCGAGCTGCACGGGCGTaGGCTGCTTCAAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: SAWATMSMPPTMMQSFSPRAARA*AASNPA
Trigger: AGCTGGGTTTGAAGCAGCCCACGCCCGTGCAGCTCG...AGGGCTGAAAGACTGCATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000602113.5
CDS-3UTR CCA 90 bp CACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAACAGCTTCTGCAAGATaGGAAGGACAAACGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HNTSAHGFCCGALGRPPGTASAR*EGQTLL
Trigger: CAGCAGCGTTTGTCCTTCCCATCTTGCAGAAGCTGT...TCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CGFRESSSAWATMSMPPTGDDHV*FPRELQ
Trigger: CTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCC...CGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR CCA 90 bp CACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HSRQDGLQVHGEVSAALFRRRAG*WPDPAA
Trigger: AGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT...GAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACATGGCGTGCACCAGGTaGATGTCGTACTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: SGKGPASGFGAEEQGPHNMACTR*MSYCVT
Trigger: GGTGACACAGTACGACATCCACCTGGTGCACGCCAT...GTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCTTCTTTTCGTCAAAGTaGGCCGCCTCCAGTTTGATC +
Preference number: 4 (lower is better)
Translates to: GPHNTSAHGFCCGALGRPFFSSK*AASSLI
Trigger: GATCAAACTGGAGGCGGCCCACTTTGACGAAAAGAA...GGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCAGACGGTGTCCTGGGTaGACGCCCCTTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DLGLGSQPPGHVLSSPAARRCPG*TPLVAS
Trigger: GCTGGCCACAAGGGGCGTCCACCCAGGACACCGTCT...GGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGTGACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGGGCAGATGGCCGTGTaGGGCTCAGACCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GDLGLGSQPPGHVLSSPAGQMAV*GSDQAL
Trigger: CAGGGCCTGGTCTGAGCCCCACACGGCCATCTGCCC...TGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGCGCCTGGGCCACCATGTCCATGCCACCGACGATGATGCAGTCTTTCAGCCCTGGACGAGTCAAGGACTaGGCAGATGGCCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SAWATMSMPPTMMQSFSPGRVKD*ADGRVG
Trigger: CCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCC...AGGGCTGAAAGACTGCATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR CCA 90 bp GATCAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGCACAAACCCCAGATGTaGCCAGGTGGGTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DQVDQVGVLDLLRHQQVAHKPQM*PGGWPG
Trigger: CCCTGGCCACCCACCTGGCCACATCTGGGGTTTGTG...CGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR TCA 90 bp TCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCTCATCCATCCCAGGTAGGCGTCCTTaGCCTTCTCAGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: STVKSVQPCSSSRSASSIPGRRP*PSQAPA
Trigger: TGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGG...GATGGATGAGGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp AGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGGCCGGTTCTTCTGCTTaGTCTTGGCCAGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RFLRPSAPWTSQGLGRWPAGSSA*SWPAQP
Trigger: AGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGC...CGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TTGATCTTGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCAGGGTCCTTCCCCGCCGGTTCTTCTGCTTaGTCTTGGCCAGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LILASSALRLASRSGSFPAGSSA*SWPAQP
Trigger: AGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGC...GGGGAAGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCAAGATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACTGCTTCAAACCCAGCTaGCGACATTGTTCCACGAGC +
Preference number: 4 (lower is better)
Translates to: REGTSQWFRGRGAGPAQHCFKPS*RHCSTS
Trigger: GCTCGTGGAACAATGTCGGCAGCTGGGTTTGAAGCA...GTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: GLQVHGEVSAALFQQPVCGRGRR*HRDPQT
Trigger: TGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCC...GCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGGCTGCGCAGGTGATCTaGCAGGCGCCCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: LNLRSIMHRIWQVLHVLVAAQVI*QAPRRG
Trigger: GCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGC...CACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGAGAGCAGGGCAGTTGCTATGCCCATTCTCCAGATGAGGAAACTGGAAGCCCAACAGCAGTGTCTGCCTaGGGGCCGGCACAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GEQGSCYAHSPDEETGSPTAVSA*GPAQPP
Trigger: TGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT...TGGGCTTCCAGTTTCCTCATCTGGAGAATGGGCATAGCAACTGCCCTGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR GCA 90 bp CACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGAGCTTCTTCTTGATCTaGTCCTCGATGGCGTGCACC +
Preference number: 4 (lower is better)
Translates to: HRGLCFPEEGLVGGQTLQSFFLI*SSMACT
Trigger: GGTGCACGCCATCGAGGAGCAGATCAAGAAGAAGCT...CTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GTGCTCATCCTGGAAGCGCTGGATCAGGTGGACCAGGTAGGCGTCCTTGACCTTTGGCCAGCTCAGCCTTaGGCTTGGCCTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: VLILEALDQVDQVGVLDLWPAQP*AWPPGQ
Trigger: CTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCA...AAGGTCAAGGACGCCTACCTGGTCCACCTGATCCAGCGCTTCCAGGATGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGCTCAGACCAGGCCACAGGTGTGAGCCACTaGACCGGGGCCATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SMDESRTGQMAVWGSDQATGVSH*TGAILF
Trigger: AAACAAGATGGCCCCGGTGCAGTGGCTCACACCTGT...GGCCTGGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595858.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGGCAAAACTTTGGGCCTaGCTGGTGGAAATGGACATG +
Preference number: 4 (lower is better)
Translates to: GQTLQLPECVGQRGAEQQAKLWA*LVEMDM
Trigger: CATGTCCATTTCCACCAGGCAGGCCCAAAGTTTTGC...CTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp ACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCAATCATGCACAGAATCTaGCAGGTCTTGCACGTGTTG +
Preference number: 4 (lower is better)
Translates to: TAVSACGPAQPPGWPPGPIMHRI*QVLHVL
Trigger: CAACACGTGCAAGACCTGCCAGATTCTGTGCATGAT...TGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTGTGGGGATGGCGTGCACCAGGTaGATGTCGTACTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: SDPQLHGRVKDWADGRVGMACTR*MSYCVT
Trigger: GGTGACACAGTACGACATCCACCTGGTGCACGCCAT...CCCCACACGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGATGGCGTGCACCAGGTaGATGTCGTACTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: EGLLPPRKVPPTLSSMDEMACTR*MSYCVT
Trigger: GGTGACACAGTACGACATCCACCTGGTGCACGCCAT...CTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATCTTGGGGAGCCCGGGGGTTTCTTTTCGTCAAAGTaGGCCGCCTCCAGTTTGATC +
Preference number: 4 (lower is better)
Translates to: CTGRPADSVDVDLGEPGGFFSSK*AASSLI
Trigger: GATCAAACTGGAGGCGGCCCACTTTGACGAAAAGAA...ACCCCCGGGCTCCCCAAGATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATACCCAGACGGTGTCCTaGGTGGACGCCCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KEGSSDPQLHGRVKDWADTQTVS*VDAPCG
Trigger: GCCACAAGGGGCGTCCACCCAGGACACCGTCTGGGT...ATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGGACTGGGCCTGAGTaGGACCCAGACGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: KEGSSDPQLHGRVKDWADGTGPE*DPDGVL
Trigger: CAGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCC...ATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGGGCCATTCGAGCAGCTaGTGTCTGCAAAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: PRRRAGWWPDPAAPGVCRGHSSS*CLQNFG
Trigger: CCCAAAGTTTTGCAGACACCAGCTGCTCGAATGGCC...CCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp GTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGATGTGGCCAGGTGGGTaGCCAGGGAAGCTTATAGCT +
Preference number: 4 (lower is better)
Translates to: VLPRRRAGWWPDPAAPGVMWPGG*PGKLIA
Trigger: AGCTATAAGCTTCCCTGGCCACCCACCTGGCCACAT...CACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR TCA 90 bp CAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGCTGCCATGCCACCGACGATaGTGCAGTCTTTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: QVDQVGVLDLLRHQQVALPCHRR*CSLSAL
Trigger: TAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGG...CAGCGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GCTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTTTGGAGCTGCGCAGGTaGTCTGCCAGGCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AEFAQHHAQNLAGLARVGLELRR*SARRPG
Trigger: GCCGGGGCGCCTGGCAGATCACCTGCGCAGCTCCAA...ACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTCCACGGTGGGGAAGCTaGATTTGCGCAGCATCATGC +
Preference number: 4 (lower is better)
Translates to: LPPRKVPPTLSSMDESRTPRWGS*ICAASC
Trigger: GCATGATGCTGCGCAAATTCAGCTTCCCCACCGTGG...AGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTCTTCGAAAGTCAGACTaGGGAAGTCAAAAGACCCGT +
Preference number: 4 (lower is better)
Translates to: VSGQRSRARTTRAPTGSALRKSD*GSQKTR
Trigger: ACGGGTCTTTTGACTTCCTCAGTCTGACTTTCGAAG...AGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR TCA 90 bp CTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCATTCGGCACAGGACTaGCCTCACCAAAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: LPRRRAGWWPDPAAPGVCHSAQD*PHQSLT
Trigger: TGTGAGGCTTTGGTGAGGTCAGTCCTGTGCCGAATG...ACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR GCA 90 bp GGTGACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCATTGGTGGCCAGACCCTaGAGCTCCCGGAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: GDLGLGSQPPGHVLSSPALVARP*SSRSVS
Trigger: CGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAA...TGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTATGGACCAGTCCTCGTaGTCATCCTGGAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LPPRKVPPTLSSMDESRTMDQSS*SSWKRW
Trigger: CCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCAT...AGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCGGAGGCCACGTCTGTTaGGATCAGGATCCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: PQGRFLRPSAPWTSQGLGGGHVC*DQDPVD
Trigger: ATCTACCGGATCCTGATCGCAACAGACGTGGCCTCC...GCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTAGCTTCTTCTTGATCTaGTCCTCGATGGCGTGCACC +
Preference number: 4 (lower is better)
Translates to: QTLQLPECVGQRGAEQQCSFFLI*SSMACT
Trigger: GGTGCACGCCATCGAGGAGCAGATCAAGAAGAAGCT...ACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGAGCTTCTTCTTGATCTaGTCCTCGATGGCGTGCACC +
Preference number: 4 (lower is better)
Translates to: RMASRSTVKSVQPCSSSRSFFLI*SSMACT
Trigger: GGTGCACGCCATCGAGGAGCAGATCAAGAAGAAGCT...CCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TGCTCCACGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGAAGCGCCGGTTCTTCTaGTTGATCTTGGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: CSTVLTGACASQKKGWLVKRRFF*LILASS
Trigger: TGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTT...CACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCGTGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGATGATGACAGGTGTGAGCCACTaGACCGGGGCCATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FRESSSAWATMSMPPTMMTGVSH*TGAILF
Trigger: AAACAAGATGGCCCCGGTGCAGTGGCTCACACCTGT...CATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000594021.5
CDS-3UTR CCA 90 bp GGTGACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAAGCCTGCCATCCTTGTaGCCGCTTGTAGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GDLGLGSQPPGHVLSSPASLPSL*PLVGAP
Trigger: AGGGGCCCCTACAAGCGGCCACAAGGATGGCAGGCT...TGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000247003.9
ENST00000629999.3
CDS-3UTR CCA 90 bp GCCACCATGTCCATGCCACCGACGATGATGCAGTCTTTCAGCCCTAGAGGCTTCGAGAGCTCCAGCGCCTaGGCCACCATGTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: ATMSMPPTMMQSFSPRGFESSSA*ATMSMP
Trigger: TGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTC...GAAGCCTCTAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGGACATGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000602113.5
CDS-3UTR CCA 90 bp TTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGATGATAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FPRELQRLGHHVHATDDDRRRAG*WPDPAA
Trigger: AGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCT...ATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594021.5
ENST00000602113.5
CDS-3UTR CCA 90 bp AGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: RKVPPTLSSMDESRTGQMSQKKG*LVARPC
Trigger: GCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGA...CATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp ACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCTTTCTGCTTCATCATaGAGTGCAGAGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: TLQLPECVGQRGAEQQCLLSASS*SAEPRW
Trigger: CCACCGTGGCTCTGCACTCCATGATGAAGCAGAAAG...CAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTTTCTTTTCGTCAAAGTaGGCCGCCTCCAGTTTGATC +
Preference number: 4 (lower is better)
Translates to: FGAEEQGPHNTSAHGFCCFFSSK*AASSLI
Trigger: GATCAAACTGGAGGCGGCCCACTTTGACGAAAAGAA...ACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGCTCAGCCTTGCGCTTaGCCTCCAGGTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: KEGSSDPQLHGRVKDWADAQPCA*PPGQGP
Trigger: AGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGC...ATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CTTCTTGATCTGCTCCTCGATGGCGTGCACCAGGTGGATGTCGTACTGTGTCACACCCAGACGGTGTCCTaGGTGGACGCCCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLDLLLDGVHQVDVVLCHTQTVS*VDAPCG
Trigger: GCCACAAGGGGCGTCCACCCAGGACACCGTCTGGGT...GTGACACAGTACGACATCCACCTGGTGCACGCCATCGAGGAGCAGATCAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AAGATGATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGCTGGATCAGGTGGGGGCAGATGGCCGTGTaGGGCTCAGACCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KMIMDQSSCSSWKRWIRWGQMAV*GSDQAL
Trigger: CAGGGCCTGGTCTGAGCCCCACACGGCCATCTGCCC...CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCATTATCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGTGACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCACAAGGACTGGGCAGATaGCCGTGTGGGGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: GDLGLGSQPPGHVLSSPAQGLGR*PCGAQT
Trigger: GGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTG...TGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp ACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTTTGGGCCTGCCTGGTaGAAATGGACATGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: TGACASQKKGWLVARPCSFGPAW*KWTWCS
Trigger: AGAACACCATGTCCATTTCCACCAGGCAGGCCCAAA...GCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR CAA 72 bp TCCTCCACCTTCTCCTTGAAGCGCCGGTTCTTCTGCTaGATCTTGGCCAGCTCAGCCTTGCGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSTFSLKRRFFC*ILASSALRLAS
Trigger: GGAGGCCAAGCGCAAGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp AAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATCCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: KEGSSDPQLHGRVKDWADPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...ATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGCCGGTCTGCCTCATCCATCACCAGGAAGCGGATCTTCTTTATACTAAAAGTGGCTGCGCAGGTGATCTaGCAGGCGCCCCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: SRSASSITRKRIFFILKVAAQVI*QAPRRG
Trigger: GCCACGCCGGGGCGCCTGGCAGATCACCTGCGCAGC...CACTTTTAGTATAAAGAAGATCCGCTTCCTGGTGATGGATGAGGCAGACCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR GCA 90 bp TGTAGCACCTCGGCCTCTTCCACGGAGAACTCCTCCAGCTTCTTCTTGATCTGCGCTCACCGGGGCCTGTaGTTCCCAGAAGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CSTSASSTENSSSFFLICAHRGL*FPEEGL
Trigger: CAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGC...GCAGATCAAGAAGAAGCTGGAGGAGTTCTCCGTGGAAGAGGCCGAGGTGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACATTTGCGCAGCATCATaGACAGAATCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: REGTSQWFRGRGAGPAQHICAAS*TESGRS
Trigger: AGACCTGCCAGATTCTGTGCATGATGCTGCGCAAAT...GTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GATCAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGGGAGGCCACGTCTGTTaGGATCAGGATCCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: DQVDQVGVLDLLRHQQVAGGHVC*DQDPVD
Trigger: ATCTACCGGATCCTGATCGCAACAGACGTGGCCTCC...CGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GGGGAAGCTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTAGCGCCCACGGGTTCTaGTGTGGGGCACTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GEAEFAQHHAQNLAGLARSAHGF*CGALGR
Trigger: CCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCT...ACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGCCTGCCTGGTGGAAATGGACATGGTGTTCTGGGCAGACACCTGAGAAACAACAGCCTGCCATCCTTGTaGCCGCTTGTAGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GLPGGNGHGVLGRHLRNNSLPSL*PLVGAP
Trigger: AGGGGCCCCTACAAGCGGCCACAAGGATGGCAGGCT...GTTGTTTCTCAGGTGTCTGCCCAGAACACCATGTCCATTTCCACCAGGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp ACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGACAGCTTCTGCAAGATaGGAAGGACAAACGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLQLPECVGQRGAEQQCLTASAR*EGQTLL
Trigger: CAGCAGCGTTTGTCCTTCCCATCTTGCAGAAGCTGT...CAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TGTAGCACCTCGGCCTCTTCCACGGAGAACTCCTCCAGCTTCTTCTTGATCTGCGAGAGCTCCAGCGCCTaGGCCACCATGTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: CSTSASSTENSSSFFLICESSSA*ATMSMP
Trigger: TGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTC...GCAGATCAAGAAGAAGCTGGAGGAGTTCTCCGTGGAAGAGGCCGAGGTGCTACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATCCTCGTGCTCATCCTaGAAGCGCTGGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QGRFLRPSAPWTSQGLGRSSCSS*KRWIRW
Trigger: CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGA...TCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CTGGATCAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTATCCTCGTGCTCATCCTaGAAGCGCTGGATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LDQVDQVGVLDLLRHQQVSSCSS*KRWIRW
Trigger: CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGA...TACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATCCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTATCATGCACAGAATCTaGCAGGTCTTGCACGTGTTG +
Preference number: 4 (lower is better)
Translates to: EGLVGGQTLQLPECVGQRIMHRI*QVLHVL
Trigger: CAACACGTGCAAGACCTGCCAGATTCTGTGCATGAT...ACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp ATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTCTTTCTGCTTCATCATaGAGTGCAGAGCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: MASRSTVKSVQPCSSSRSLSASS*SAEPRW
Trigger: CCACCGTGGCTCTGCACTCCATGATGAAGCAGAAAG...AGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCAGCCCGGGGGTGTTGTaGTTGATGACCACCTGTACC +
Preference number: 4 (lower is better)
Translates to: DLGLGSQPPGHVLSSPAASPGVL*LMTTCT
Trigger: GGTACAGGTGGTCATCAACCACAACACCCCCGGGCT...GGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CAGCTGGTGTCTGCAAAACTTTGGGCCTGCCTGGTGGAAATGGACATGGTGTTCAGACGGTGTCCTGGGTaGACGCCCCTTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QLVSAKLWACLVEMDMVFRRCPG*TPLVAS
Trigger: GCTGGCCACAAGGGGCGTCCACCCAGGACACCGTCT...GAACACCATGTCCATTTCCACCAGGCAGGCCCAAAGTTTTGCAGACACCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp GGTGACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGAAGGGACCAGCCAGTaGTTTCGGGGCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GDLGLGSQPPGHVLSSPAEGTSQ*FRGRGA
Trigger: TGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTC...TGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CAGGATCAGCTGCTTCCGTTTGTTGATCTCCTTCTTTTCGTCAAAGTGGGCCGCGGAGGCAGAGGTGGCTaGTCAGCTCCACGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QDQLLPFVDLLLFVKVGRGGRGG*SAPREA
Trigger: GGCCTCCCGTGGAGCTGACCAGCCACCTCTGCCTCC...GCGGCCCACTTTGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCTGATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595858.5
CDS-3UTR CCA 90 bp AGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGAACTTTGGGCCTGCCTaGTGGAAATGGACATGGTGT +
Preference number: 4 (lower is better)
Translates to: RMASRSTVKSVQPCSSSRNFGPA*WKWTWC
Trigger: ACACCATGTCCATTTCCACCAGGCAGGCCCAAAGTT...CCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp TCTTGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCAGGGTCCTTCCCCTCCAGTGTCTGCAAAACTTTaGGCCTGCCTGGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: SWPAQPCAWPPGQGPSPPVSAKL*ACLVEM
Trigger: CATTTCCACCAGGCAGGCCCAAAGTTTTGCAGACAC...TGGAGGGGAAGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR TCA 90 bp TGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCTGAATCCTCCAGGTCCACGGTaGAGTCAGTGCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: WVGVTTSRSCSFFPCSLNPPGPR*SQCSPV
Trigger: AACAGGGCTGCACTGACTTCACCGTGGACCTGGAGG...ATTCAGGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGCGGTCAGCGTGGCGCTaGACAGCAGTGTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LNLRSIMHRIWQVLHVLVRSAWR*TAVSAC
Trigger: GCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCG...CACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CGTCTCCTCCACCTTCTCCTTGAAGCGCCGGTTCTTCTGCTTGATCTTGGCCAGCCACGGTGGGGAAGCTaGATTTGCGCAGCATCATGC +
Preference number: 4 (lower is better)
Translates to: RLLHLLLEAPVLLLDLGQPRWGS*ICAASC
Trigger: GCATGATGCTGCGCAAATTCAGCTTCCCCACCGTGG...CTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCGCTGCTTCCGTTTGTTaGTCTCCTTCTTTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: ASRSTVKSVQPCSSSRSAAASVC*SPSFRQ
Trigger: TTGACGAAAAGAAGGAGATCAACAAACGGAAGCAGC...GGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp ACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCTCCTCCACCTTCTCCTTaGAGCGCCGGTTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TLGWGHNLPVMFFLPLQPPPPSP*SAGSSA
Trigger: AGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGG...AGGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp AAGATGATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGCTGGATCAGGTGGCTTGCAGATGAGGGGTaGGGCTTGGAGTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: KMIMDQSSCSSWKRWIRWLADEG*GLESEG
Trigger: CCCCTCGGACTCCAAGCCTCACCCCTCATCTGCAAG...CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCATTATCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR GCA 90 bp CAGCTGGTGTCTGCAAAACTTTGGGCCTGCCTGGTGGAAATGGACATGGTGTTCTGCACGGGCGTGGGCTaGTTCAAACCCAGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: QLVSAKLWACLVEMDMVFCTGVG*FKPSCR
Trigger: TCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCA...GAACACCATGTCCATTTCCACCAGGCAGGCCCAAAGTTTTGCAGACACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR GCA 90 bp TGCTCCTCGATGGCGTGCACCAGGTGGATGTCGTACTGTGTCACCAGCGTGATGTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: CSSMACTRWMSYCVTSVMFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...CATCACGCTGGTGACACAGTACGACATCCACCTGGTGCACGCCATCGAGGAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AAGATGATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGCTGGATCAGGTGGTTGGTGGCCAGACCCTaGAGCTCCCGGAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: KMIMDQSSCSSWKRWIRWLVARP*SSRSVS
Trigger: CGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAA...CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCATTATCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp ATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGCTGGATCAGGTGGACCAGGATGGACCAGTCCTCGTaGTCATCCTGGAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: IMDQSSCSSWKRWIRWTRMDQSS*SSWKRW
Trigger: CCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCAT...CCTGGTCCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCATTAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TCCATGCCACCGACGATGATGCAGTCTTTCAGCCCTAGAGGCTTCCCCAGGACCGGAGGCCACGTCTGTTaGGATCAGGATCCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: SMPPTMMQSFSPRGFPRTGGHVC*DQDPVD
Trigger: ATCTACCGGATCCTGATCGCAACAGACGTGGCCTCC...GGTCCTGGGGAAGCCTCTAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR GCA 90 bp TGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGAGCTTCTTCTTGATCTaGTCCTCGATGGCGTGCACC +
Preference number: 4 (lower is better)
Translates to: CPQGRFLRPSAPWTSQGLSFFLI*SSMACT
Trigger: GGTGCACGCCATCGAGGAGCAGATCAAGAAGAAGCT...CAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GTGGGGAAGCTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACTGGCCAGCTCAGCCTTaGGCTTGGCCTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: VGKLNLRSIMHRIWQVLHWPAQP*AWPPGQ
Trigger: CTGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCA...GTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGCTGGTCCAGCTGCTCCACGGTACAGCTTCTGCAAGATaGGAAGGACAAACGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLDLLRHQQVALVQLLHGTASAR*EGQTLL
Trigger: CAGCAGCGTTTGTCCTTCCCATCTTGCAGAAGCTGT...ACCGTGGAGCAGCTGGACCAGCGCTACCTGCTGGTGCCTGAGAAGGTCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TTCAGCGTCTCCTCCACCTTCTCCTTGAAGCGCCGGTTCTTCTGCTTGATCTTGGAGAGCTCCAGCGCCTaGGCCACCATGTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: FSVSSTFSLKRRFFCLILESSSA*ATMSMP
Trigger: TGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTC...CAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGAGACGCTGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GGCCGCCTCCAGTTTGATCTCACACTCTCTTCGCACCACGTTGACCTGTGTGAGGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRLQFDLTLSSHHVDLCEGDDHV*FPRELQ
Trigger: CTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCC...CTCACACAGGTCAACGTGGTGCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTATCATGCACAGAATCTaGCAGGTCTTGCACGTGTTG +
Preference number: 4 (lower is better)
Translates to: QTLQLPECVGQRGAEQQCIMHRI*QVLHVL
Trigger: CAACACGTGCAAGACCTGCCAGATTCTGTGCATGAT...ACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp ACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCTAGCCCGGGGGTGTTGTaGTTGATGACCACCTGTACC +
Preference number: 4 (lower is better)
Translates to: TLGWGHNLPVMFFLPLQPSPGVL*LMTTCT
Trigger: GGTACAGGTGGTCATCAACCACAACACCCCCGGGCT...AGGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AAGATGATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGCTGGATCAGGTGGGCTCAGCCTTGCGCTTaGCCTCCAGGTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: KMIMDQSSCSSWKRWIRWAQPCA*PPGQGP
Trigger: AGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGC...CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCATTATCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTTGGTGGAAATGGACATaGTGTTCTGGGCAGACACCT +
Preference number: 4 (lower is better)
Translates to: LPRRRAGWWPDPAAPGVCWWKWT*CSGQTP
Trigger: AGGTGTCTGCCCAGAACACCATGTCCATTTCCACCA...ACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp CCGGCCGACTCGGTGGATGTAGATCTTGGGGAGCCCGGGGGTGTTGTGGTTGATTTCCCTGCGTCTTTTTaGGTGCCCCTGAATCCATGT +
Preference number: 4 (lower is better)
Translates to: PADSVDVDLGEPGGVVVDFPASF*VPLNPC
Trigger: ACATGGATTCAGGGGCACCCAAAAAGACGCAGGGAA...ATCAACCACAACACCCCCGGGCTCCCCAAGATCTACATCCACCGAGTCGGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR CAA 72 bp ACCTTCTCCTTGAAGCGCCGGTTCTTCTGCTTGATCTaGGCCAGCTCAGCCTTGCGCTTGGCCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TFSLKRRFFCLI*ASSALRLASRS
Trigger: TGACCTGGAGGCCAAGCGCAAGGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GTGCTCATCCTGGAAGCGCTGGATCAGGTGGACCAGGTAGGCGTCCTTGACCTTGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: VLILEALDQVDQVGVLDLGRGRR*HRDPQT
Trigger: TGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCC...AAGGTCAAGGACGCCTACCTGGTCCACCTGATCCAGCGCTTCCAGGATGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TCCATGCCACCGACGATGATGCAGTCTTTCAGCCCTAGAGGCTTCCCCAGGACCGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: SMPPTMMQSFSPRGFPRTGRGRR*HRDPQT
Trigger: TGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCC...GGTCCTGGGGAAGCCTCTAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000602113.5
CDS-3UTR GCA 90 bp CGTCTCCTCCACCTTCTCCTTGAAGCGCCGGTTCTTCTGCTTGATCTTGGCCAGTTCCAGCAGCCGGTCTaGCTCATCCATCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: RLLHLLLEAPVLLLDLGQFQQPV*LIHHQE
Trigger: TTCCTGGTGATGGATGAGGCAGACCGGCTGCTGGAA...CTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGAGACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CAGGATCAGCTGCTTCCGTTTGTTGATCTCCTTCTTTTCGTCAAAGTGGGCCGCTTGGTGGCCAGACCCTaGAGCTCCCGGAGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: QDQLLPFVDLLLFVKVGRLVARP*SSRSVS
Trigger: CGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAA...GCGGCCCACTTTGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCTGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp ATGATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGCTGGATCAGGTGGACCATGGACCAGTCCTCGTaGTCATCCTGGAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: MIMDQSSCSSWKRWIRWTMDQSS*SSWKRW
Trigger: CCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCAT...GGTCCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCATTATCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGGAGAGCTCCAGCGCCTaGGCCACCATGTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: LNLRSIMHRIWQVLHVLVESSSA*ATMSMP
Trigger: TGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTC...CACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGATCATGCACAGAATCTaGCAGGTCTTGCACGTGTTG +
Preference number: 4 (lower is better)
Translates to: RFLRPSAPWTSQGLGRWPIMHRI*QVLHVL
Trigger: CAACACGTGCAAGACCTGCCAGATTCTGTGCATGAT...CGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp AGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCTCATCCATCATGCACAGAATCTaGCAGGTCTTGCACGTGTTG +
Preference number: 4 (lower is better)
Translates to: RSTVKSVQPCSSSRSASSIMHRI*QVLHVL
Trigger: CAACACGTGCAAGACCTGCCAGATTCTGTGCATGAT...GGATGAGGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGCTGTTCTTTTCGTCAAAGTaGGCCGCCTCCAGTTTGATC +
Preference number: 4 (lower is better)
Translates to: QVDQVGVLDLLRHQQVALFFSSK*AASSLI
Trigger: GATCAAACTGGAGGCGGCCCACTTTGACGAAAAGAA...CAGCGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCCTTCTTTTCGTCAAAGTGGGCCGCCTCCAGTTTGATCTCACACTCTCTTCGCGCTCAGCCTTGCGCTTaGCCTCCAGGTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SFFSSKWAASSLISHSLRAQPCA*PPGQGP
Trigger: AGGACCCTGACCTGGAGGCCAAGCGCAAGGCTGAGC...GCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCACTTTGACGAAAAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCTTGTCTGGCCAAATTTaGACTTTCATGGCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: HSRQDGLQVHGEVSAALFLSGQI*TFMAPS
Trigger: TGAAGGGGCCATGAAAGTCCAAATTTGGCCAGACAA...GAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp GCTGGTGTCTGCAAAACTTTGGGCCTGCCTGGTGGAAATGGACATGGTGTTCTGCCAGGAAGCTGGCTCTaGTGTCTCTCTGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AGVCKTLGLPGGNGHGVLPGSWL*CLSACP
Trigger: GGGACAGGCAGAGAGACACCAGAGCCAGCTTCCTGG...CAGAACACCATGTCCATTTCCACCAGGCAGGCCCAAAGTTTTGCAGACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR TCA 90 bp CTCCTCCACCTTCTCCTTGAAGCGCCGGTTCTTCTGCTTGATCTTGGCCAGCTCTGCCCATTCTCCAGATaGGGAAACTGGAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLHLLLEAPVLLLDLGQLCPFSR*GNWKPR
Trigger: TCTGGGCTTCCAGTTTCCTCATCTGGAGAATGGGCA...GAGCTGGCCAAGATCAAGCAGAAGAACCGGCGCTTCAAGGAGAAGGTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR GCA 90 bp CTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGGACCCGGAACTGCTCTaGGATCTGGTAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LNLRSIMHRIWQVLHVLVDPELL*DLVGQL
Trigger: GAGCTGGCCTACCAGATCGCAGAGCAGTTCCGGGTC...CACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: LNLRSIMHRIWQVLHVLVSQKKG*LVARPC
Trigger: GCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGA...CACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp GAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGAACAAGGACTGGGCAGATaGCCGTGTGGGGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: EFAQHHAQNLAGLARVGEQGLGR*PCGAQT
Trigger: GGTCTGAGCCCCACACGGCCATCTGCCCAGTCCTTG...TTCACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
3UTR CAA 72 bp GCCTCCAGTTTGATCTCACACTCTCTTCGCACCACGTaGACCTGTGTGAGGATCTGTAGCACCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ASSLISHSLRTT*TCVRICSTSAS
Trigger: AGAGGCCGAGGTGCTACAGATCCTCACACAGGTCAACGTGGTGCGAAGAGAGTGTGAGATCAAACTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp CAGCTGCTTCCGTTTGTTGATCTCCTTCTTTTCGTCAAAGTGGGCCGCCTCCAGCCTCCAGCTTCTTCTTaGTCTGCTCCTCGATGGCGT +
Preference number: 4 (lower is better)
Translates to: QLLPFVDLLLFVKVGRLQPPASS*SAPRWR
Trigger: ACGCCATCGAGGAGCAGATCAAGAAGAAGCTGGAGG...CTGGAGGCGGCCCACTTTGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR TCA 90 bp TTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGATGATGCTGCTTCCGTTTGTTaGTCTCCTTCTTTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: FPRELQRLGHHVHATDDDAASVC*SPSFRQ
Trigger: TTGACGAAAAGAAGGAGATCAACAAACGGAAGCAGC...ATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR TCA 90 bp TGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGCTGCTTCCGTTTGTTaGTCTCCTTCTTTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: CPQGRFLRPSAPWTSQGLAASVC*SPSFRQ
Trigger: TTGACGAAAAGAAGGAGATCAACAAACGGAAGCAGC...CAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGAAGATGATGGACCAGTCCTCGTaGTCATCCTGGAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LRSIMHRIWQVLHVLVKMMDQSS*SSWKRW
Trigger: CCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCAT...CATCTTCACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp TCCTTCTTTTCGTCAAAGTGGGCCGCCTCCAGTTTGATCTCACACTCTCTTCGCGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SFFSSKWAASSLISHSLRGDDHV*FPRELQ
Trigger: CTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCC...GCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCACTTTGACGAAAAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CCA 90 bp CCGGTCTGCCTCATCCATCACCAGGAAGCGGATCTTCTTTATACTAAAAGTGTTGGGACTGGGCCTGAGTaGGACCCAGACGGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PVCLIHHQEADLLYTKSVGTGPE*DPDGVL
Trigger: CAGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCC...AACACTTTTAGTATAAAGAAGATCCGCTTCCTGGTGATGGATGAGGCAGACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR CCA 90 bp CTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGCCTCACAGCTGCCTCTaGAGAGCAGGGCAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: LNLRSIMHRIWQVLHVLVPHSCL*RAGQLL
Trigger: TAGCAACTGCCCTGCTCTCCAGAGGCAGCTGTGAGG...CACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CCA 90 bp TGCTCCACGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGTTAGCCCACATTGTCTaGCCAAATTTGGACTTTCAT +
Preference number: 4 (lower is better)
Translates to: CSTVLTGACASQKKGWLVLAHIV*PNLDFH
Trigger: ATGAAAGTCCAAATTTGGCCAGACAATGTGGGCTAA...CACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCGTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
3UTR CAA 72 bp ATCATGGAGTGCAGAGCCACGGTGGGGAAGCTGAATTaGCGCAGCATCATGCACAGAATCTGGCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: IMECRATVGKLN*RSIMHRIWQVL
Trigger: CAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCACCGTGGCTCTGCACTCCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GTGGGGAAGCTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: VGKLNLRSIMHRIWQVLHGRGRR*HRDPQT
Trigger: TGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCC...GTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp CAGGATCAGCTGCTTCCGTTTGTTGATCTCCTTCTTTTCGTCAAAGTGGGCCGCGGAGGCCACGTCTGTTaGGATCAGGATCCGGTAGAT +
Preference number: 4 (lower is better)
Translates to: QDQLLPFVDLLLFVKVGRGGHVC*DQDPVD
Trigger: ATCTACCGGATCCTGATCGCAACAGACGTGGCCTCC...GCGGCCCACTTTGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCTGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GAAGCGGATCTTCTTTATACTAAAAGTGTTGGAGCTGCGCAGGTGATCTGCCAGCCTTGTGGCCAGCCCTaGCAGCCTTCTGTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: EADLLYTKSVGAAQVICQPCGQP*QPSVAS
Trigger: TGAAGCGACAGAAGGCTGGCAGGGCTGGCCACAAGG...CTGGCAGATCACCTGCGCAGCTCCAACACTTTTAGTATAAAGAAGATCCGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR TCA 90 bp AAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGCTGCTTCCGTTTGTTaGTCTCCTTCTTTTCGTCAA +
Preference number: 4 (lower is better)
Translates to: KEGSSDPQLHGRVKDWADAASVC*SPSFRQ
Trigger: TTGACGAAAAGAAGGAGATCAACAAACGGAAGCAGC...ATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp GATCTTCTTTATACTAAAAGTGTTGGAGCTGCGCAGGTGATCTGCCAGGCGCCCGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: DLLYTKSVGAAQVICQAPGRGRR*HRDPQT
Trigger: TGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCC...GGGCGCCTGGCAGATCACCTGCGCAGCTCCAACACTTTTAGTATAAAGAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR CCA 90 bp GCACGTGTTGGTGAAGATGATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGACAGCTTCTGCAAGATaGGAAGGACAAACGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ARVGEDDNGPVLVLILEATASAR*EGQTLL
Trigger: CAGCAGCGTTTGTCCTTCCCATCTTGCAGAAGCTGT...CGCTTCCAGGATGAGCACGAGGACTGGTCCATTATCATCTTCACCAACACGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000629999.3
CDS-3UTR TCA 90 bp GAAGCGGATCTTCTTTATACTAAAAGTGTTGGAGCTGCGCAGGTGATCTGCCAGCCATGCCACCGACGATaGTGCAGTCTTTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: EADLLYTKSVGAAQVICQPCHRR*CSLSAL
Trigger: TAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGG...CTGGCAGATCACCTGCGCAGCTCCAACACTTTTAGTATAAAGAAGATCCGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000594021.5
ENST00000602113.5
CDS-3UTR TCA 90 bp GGAGAGCAGGGCAGTTGCTATGCCCATTCTCCAGATGAGGAAACTGGAAGCCCACTTTTTGGGTGCCCCTaGATCCATGTAGCAGTTATA +
Preference number: 4 (lower is better)
Translates to: GEQGSCYAHSPDEETGSPLFGCP*IHVAVI
Trigger: TATAACTGCTACATGGATTCAGGGGCACCCAAAAAG...TGGGCTTCCAGTTTCCTCATCTGGAGAATGGGCATAGCAACTGCCCTGCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR GCA 90 bp GGGGAAGCTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTATTTGCGCAGCATCATaGACAGAATCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GEAEFAQHHAQNLAGLARICAAS*TESGRS
Trigger: AGACCTGCCAGATTCTGTGCATGATGCTGCGCAAAT...ACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp AGCCGGTCTGCCTCATCCATCACCAGGAAGCGGATCTTCTTTATACTAAAAGTGACAGGTGTGAGCCACTaGACCGGGGCCATCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SRSASSITRKRIFFILKVTGVSH*TGAILF
Trigger: AAACAAGATGGCCCCGGTGCAGTGGCTCACACCTGT...CACTTTTAGTATAAAGAAGATCCGCTTCCTGGTGATGGATGAGGCAGACCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000594021.5
CDS-3UTR GCA 90 bp AAGCTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGAGGGAAGCTTATAGCTaGACCCATTCGGCACAGGAC +
Preference number: 4 (lower is better)
Translates to: KLNLRSIMHRIWQVLHVLREAYS*THSAQD
Trigger: GTCCTGTGCCGAATGGGTGCAGCTATAAGCTTCCCT...CAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR GCA 90 bp GCTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTATTTGCGCAGCATCATaGACAGAATCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AEFAQHHAQNLAGLARVGICAAS*TESGRS
Trigger: AGACCTGCCAGATTCTGTGCATGATGCTGCGCAAAT...ACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR GCA 90 bp TTCCGTTTGTTGATCTCCTTCTTTTCGTCAAAGTGGGCCGCCTCCAGTTTGATCATTTGCGCAGCATCATaGACAGAATCTGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FRLLISFFSSKWAASSLIICAAS*TESGRS
Trigger: AGACCTGCCAGATTCTGTGCATGATGCTGCGCAAAT...GATCAAACTGGAGGCGGCCCACTTTGACGAAAAGAAGGAGATCAACAAACGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATCTGGGTGGACGCCCCTaGTGGCCAGCCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: QRGAEQQCLPAGRHSRQDLGGRP*WPALPA
Trigger: GGCTGGCAGGGCTGGCCACAAGGGGCGTCCACCCAG...ATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS CCA 90 bp GCGCAGGTGATCTGCCAGGCGCCCCGGCGTGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: AQVICQAPRRGDDHV*FPRELQRLGHHVWG
Trigger: CCCCCAGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599373.5
ENST00000599981.5
ENST00000601803.5
CDS-3UTR CAA 90 bp GGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCGAAGCCTGCCATCCTaGTGGCCGCTTGTAGGGGCC +
Preference number: 5 (lower is better)
Translates to: GPHNTSAHGFCCGALGRPRSLPS*WPLVGA
Trigger: GGCCCCTACAAGCGGCCACAAGGATGGCAGGCTTCG...GGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000247003.9
ENST00000629999.3
CDS GCA 90 bp GAGGGACAGAGGCCCAAGGCTCGGCCTCCCCCTCCACTGCTCACCTaGACGGGCCGTCCGGCCGACTCGGTGGATGTAGATCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: EGQRPKARPPPPLLT*TGRPADSVDVDLGE
Trigger: CTCCCCAAGATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAGGTGAGCAGTGGAGGGGGAGGCCGAGCCTTGGGCCTCTGTCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601803.5
CDS CCA 90 bp GCGCAGGTGATCTGCCAGGCGCCCCGGCGTGGCGATGACCACGTGTaGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AQVICQAPRRGDDHV*FPRELQRLGHHVWW
Trigger: CCACCAGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGGGCGCCTGGCAGATCACCTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598972.5
CDS-3UTR CAA 90 bp GCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGGGGAGGCCACGTCTGTaGCGATCAGGATCCGGTAGA +
Preference number: 5 (lower is better)
Translates to: AVSACGPAQPPGWPPGPRGRPRL*RSGSGR
Trigger: TCTACCGGATCCTGATCGCAACAGACGTGGCCTCCC...CCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp AGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGGGGGTGACCTTGGGTaGGGGTCACAACCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: RSRARTTRAPTGSAVGHWGGDLG*GSQPPG
Trigger: ACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCCC...CCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCT
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp AGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGGGGGTGACCTTGGGTaGGGGTCACAACCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: SVALNSSVCLRAGTAARMGGDLG*GSQPPG
Trigger: ACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCCC...CATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TGTCTGCCTGCGGGCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGGGGGTGACCTTGGGTaGGGGTCACAACCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: CLPAGRHSRQDGLQVHGEGGDLG*GSQPPG
Trigger: ACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCCC...TTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGCCCGCAGGCAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS GCA 90 bp TCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCTCATCCATCACCTaGCGTGCCAATGGGGGCAGGGGTGAGGGTGCCGTCCATGGCCCC +
Preference number: 5 (lower is better)
Translates to: SVQPCSSSRSASSIT*RANGGRGEGAVHGP
Trigger: GGGGCCATGGACGGCACCCTCACCCCTGCCCCCATTGGCACGGCAGGTGATGGATGAGGCAGACCGGCTGCTGGAACAGGGCTGCACTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601803.5
CDS-3UTR CAA 90 bp AGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGGGAGCCCGGGGGTGTaGTGGTTGATGACCACCTGT +
Preference number: 5 (lower is better)
Translates to: RSRARTTRAPTGSAVGHWGSPGV*WLMTTC
Trigger: ACAGGTGGTCATCAACCACAACACCCCCGGGCTCCC...CCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGGGGAGCCCGGGGGTGTaGTGGTTGATGACCACCTGT +
Preference number: 5 (lower is better)
Translates to: QGPHNTSAHGFCCGALGRGSPGV*WLMTTC
Trigger: ACAGGTGGTCATCAACCACAACACCCCCGGGCTCCC...CCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGCCGGTTCTTCTGCTaGATCTTGGCCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ARTTRAPTGSAVGHWVGPRRFFC*ILASSA
Trigger: GGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCG...GGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS GCA 90 bp GGGATGCAGCCGAGCTGCACGGGCGTGGGCTGCTTCAAACCCAGCTaGCGACATTGTTCCACGAGCCACGATGACAGCCCGAGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: GMQPSCTGVGCFKPS*RHCSTSHDDSPSSA
Trigger: CGCGGAGCTCGGGCTGTCATCGTGGCTCGTGGAACAATGTCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCAGCTCGGCTGCATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000247003.9
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000599373.5
ENST00000599981.5
ENST00000602113.5
ENST00000629999.3
CDS CCA 90 bp CTCGACCCTCCAGGATGGCGGGGATGCAGCCGAGCTGCACGGGCGTaGGCTGCTTCAAACCCAGCTGCCGACATTGTTCCACGAGCCACG +
Preference number: 5 (lower is better)
Translates to: LDPPGWRGCSRAARA*AASNPAADIVPRAT
Trigger: CGTGGCTCGTGGAACAATGTCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGGAGGGTCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000247003.9
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000599373.5
ENST00000599981.5
ENST00000629999.3
CDS CCA 90 bp TCGTGCTCATCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTaGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: SCSSGPVLPRRRAGW*PDPAAPGVCRSAWR
Trigger: GCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGATGAGCACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599156.5
CDS-3UTR CAA 90 bp TCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGGAGGCCACGTCTGTaGCGATCAGGATCCGGTAGA +
Preference number: 5 (lower is better)
Translates to: SGQRSRARTTRAPTGSAVGRPRL*RSGSGR
Trigger: TCTACCGGATCCTGATCGCAACAGACGTGGCCTCCC...CACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGGGAGCCCGGGGGTGTaGTGGTTGATGACCACCTGT +
Preference number: 5 (lower is better)
Translates to: FGAEEQGPHNTSAHGFCCGSPGV*WLMTTC
Trigger: ACAGGTGGTCATCAACCACAACACCCCCGGGCTCCC...ACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTCTGGGTGGACGCCCCTaGTGGCCAGCCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LPPRKVPPTLSSMDESRTLGGRP*WPALPA
Trigger: GGCTGGCAGGGCTGGCCACAAGGGGCGTCCACCCAG...AGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS GCA 90 bp CCCTCCAGGATGGCGGGGATGCAGCCGAGCTGCACGGGCGTGGGCTaGTTCAAACCCAGCTGCCGACATTGTTCCACGAGCCACGATGAC +
Preference number: 5 (lower is better)
Translates to: PSRMAGMQPSCTGVG*FKPSCRHCSTSHDD
Trigger: GTCATCGTGGCTCGTGGAACAATGTCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000247003.9
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000599373.5
ENST00000599981.5
ENST00000629999.3
CDS CCA 90 bp CAGCTTCCTCCAGGATGGCGGGGATGCAGCCGAGCTGCACGGGCGTaGGCTGCTTCAAACCCAGCTGCCGACATTGTTCCACGAGCCACG +
Preference number: 5 (lower is better)
Translates to: QLPPGWRGCSRAARA*AASNPAADIVPRAT
Trigger: CGTGGCTCGTGGAACAATGTCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGGAGGAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000602113.5
CDS CCA 90 bp TCCTCGTGCTCATCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTaGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: SSCSSGPVLPRRRAG*WPDPAAPGVCRSAW
Trigger: CCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGATGAGCACGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599156.5
CDS CCA 90 bp CCAGTCCTCGTGCTCATCGGGGCCTGTGCTTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PVLVLIGACASQKKG*LVARPCSSRSVSVS
Trigger: GCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGATGAGCACGAGGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599156.5
CDS-3UTR CAA 90 bp CGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGAAGCCTGCCATCCTaGTGGCCGCTTGTAGGGGCC +
Preference number: 5 (lower is better)
Translates to: RVVSERAPAPGPPCPCHRRSLPS*WPLVGA
Trigger: GGCCCCTACAAGCGGCCACAAGGATGGCAGGCTTCG...TCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594021.5
CDS-3UTR CAA 90 bp CCTGACCCTGCCGCCCTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATCTCCGGGGGTGTTGTGGTaGATGACCACCTGTACCGTA +
Preference number: 5 (lower is better)
Translates to: PDPAALHGPSGRLGGCRSPGVLW*MTTCTV
Trigger: TACGGTACAGGTGGTCATCAACCACAACACCCCCGG...AGATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAGGGCGGCAGGGTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCATGGGCCGCCTCCAGTTaGATCTCACACTCTCTTCGC +
Preference number: 5 (lower is better)
Translates to: GLREGTSQWFRGRGAGPAWAASS*ISHSLR
Trigger: GCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCA...TGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCTGGGCCGCCTCCAGTTaGATCTCACACTCTCTTCGC +
Preference number: 5 (lower is better)
Translates to: GPASGFGAEEQGPHNTSAWAASS*ISHSLR
Trigger: GCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCA...GGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTGGGGGTGACCTTGGGTaGGGGTCACAACCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: QTLQLPECVGQRGAEQQCGGDLG*GSQPPG
Trigger: ACCGGGAGGTTGTGACCCCAACCCAAGGTCACCCCC...ACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS GCA 90 bp TCCTCCAGGATGGCGGGGATGCAGCCGAGCTGCACGGGCGTGGGCTaGTTCAAACCCAGCTGCCGACATTGTTCCACGAGCCACGATGAC +
Preference number: 5 (lower is better)
Translates to: SSRMAGMQPSCTGVG*FKPSCRHCSTSHDD
Trigger: GTCATCGTGGCTCGTGGAACAATGTCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593361.5
ENST00000602113.5
CDS-3UTR CAA 90 bp AGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGAAGGGCTGCTGTGGGGAAGCTGAATTaGCGCAGCATCATGCACAGA +
Preference number: 5 (lower is better)
Translates to: SAHGFCCGALGRPPGRAAVGKLN*RSIMHR
Trigger: TCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCAC...AGCAGCCCTTCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCATGCTGGACTTGAACTaGGCTAGGGCGGCAAAGCGT +
Preference number: 5 (lower is better)
Translates to: GPASGFGAEEQGPHNTSAMLDLN*ARAAKR
Trigger: ACGCTTTGCCGCCCTAGCCAAGTTCAAGTCCAGCAT...GGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GTTTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTCCGGGGGTGTTGTGGTaGATGACCACCTGTACCGTA +
Preference number: 5 (lower is better)
Translates to: VSGQRSRARTTRAPTGSAPGVLW*MTTCTV
Trigger: TACGGTACAGGTGGTCATCAACCACAACACCCCCGG...AGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGGGGAGCCCGGGGGTGTaGTGGTTGATGACCACCTGT +
Preference number: 5 (lower is better)
Translates to: EGLLPPRKVPPTLSSMDEGSPGV*WLMTTC
Trigger: ACAGGTGGTCATCAACCACAACACCCCCGGGCTCCC...CTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GCCGGCACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTCCTCCAGCTTCTTCTaGATCTGCTCCTCGATGGCG +
Preference number: 5 (lower is better)
Translates to: AGTAARMASRSTVKSVQPSSSFF*ICSSMA
Trigger: CGCCATCGAGGAGCAGATCAAGAAGAAGCTGGAGGA...GGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGCGCCGGTTCTTCTGCTaGATCTTGGCCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: QLPECVGQRGAEQQCLPARRFFC*ILASSA
Trigger: GGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCG...CGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACACTCCGGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GGTGACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCACTGGGTGGACGCCCCTaGTGGCCAGCCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GDLGLGSQPPGHVLSSPALGGRP*WPALPA
Trigger: GGCTGGCAGGGCTGGCCACAAGGGGCGTCCACCCAG...TGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CACAACACGAGCGCCCACGGGTTCTGCTGTGGGGCACTGGGTAGGCCCCCGGGATGCACCGGGGCCATCTaGTTTAATTCTGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: HNTSAHGFCCGALGRPPGCTGAI*FNSAGP
Trigger: GGGTCCTGCAGAATTAAACAAGATGGCCCCGGTGCA...TCCCGGGGGCCTACCCAGTGCCCCACAGCAGAACCCGTGGGCGCTCGTGTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000595858.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CCTGACCCTGCCGCCCTGCACGGGCCGTCCGGCCGACTCGGTGGATGTAGATCTTGCACCGGGGCCATCTaGTTTAATTCTGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: PDPAALHGPSGRLGGCRSCTGAI*FNSAGP
Trigger: GGGTCCTGCAGAATTAAACAAGATGGCCCCGGTGCA...AGATCTACATCCACCGAGTCGGCCGGACGGCCCGTGCAGGGCGGCAGGGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595858.5
ENST00000629999.3
CDS TCA 90 bp GGGCTGCTTCAAACCCAGCTGCCGACATTGTTCCACGAGCCACGATaGCAGCCCGAGCTCCGCGAAGCCTGCCATCCTTGTGGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: GLLQTQLPTLFHEPR*QPELREACHPCGRL
Trigger: CAAGCGGCCACAAGGATGGCAGGCTTCGCGGAGCTCGGGCTGTCATCGTGGCTCGTGGAACAATGTCGGCAGCTGGGTTTGAAGCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247003.9
ENST00000594021.5
ENST00000595858.5
ENST00000599373.5
ENST00000599981.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TTCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTATGCTGGACTTGAACTaGGCTAGGGCGGCAAAGCGT +
Preference number: 5 (lower is better)
Translates to: FGAEEQGPHNTSAHGFCCMLDLN*ARAAKR
Trigger: ACGCTTTGCCGCCCTAGCCAAGTTCAAGTCCAGCAT...ACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GGGAAGGGCTGCTGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGTGGGCCGCCTCCAGTTaGATCTCACACTCTCTTCGC +
Preference number: 5 (lower is better)
Translates to: GKGCCPQGRFLRPSAPWTWAASS*ISHSLR
Trigger: GCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCA...CGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCAGCAGCCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGCGCCGGTTCTTCTGCTaGATCTTGGCCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LCFPEEGLVGGQTLQLPERRFFC*ILASSA
Trigger: GGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCG...CTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS TCA 90 bp AGTAGCTCTCATCTGTGGGCTGCACCCTACCCACGTCCTACCACCTaGATTTGCTGGGCAGGCTGGAGGGACAGAGGCCCAAGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: SSSHLWAAPYPRPTT*ICWAGWRDRGPRLG
Trigger: GCCGAGCCTTGGGCCTCTGTCCCTCCAGCCTGCCCAGCAAATTCAGGTGGTAGGACGTGGGTAGGGTGCAGCCCACAGATGAGAGCTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601803.5
CDS GCA 90 bp GCTCTGACATTGGGCCTGGAGGCTCCGAGCCCAGCTCCTGAGGTCTaGAGGGGCGGGGCGAACTCACCAGGAAGCGGATCTTCTTTATAC +
Preference number: 5 (lower is better)
Translates to: ALTLGLEAPSPAPEV*RGGANSPGSGSSLY
Trigger: GTATAAAGAAGATCCGCTTCCTGGTGAGTTCGCCCCGCCCCTGCAGACCTCAGGAGCTGGGCTCGGAGCCTCCAGGCCCAATGTCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599373.5
ENST00000601803.5
CDS-3UTR CAA 90 bp AGGGCTCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCAGAATCTGGCAGGTCTaGCACGTGTTGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: RAQGRDQPVVSGQRSRARRIWQV*HVLVKM
Trigger: CATCTTCACCAACACGTGCAAGACCTGCCAGATTCT...GCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GCTGGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCAGCGTGGCGCAGAATCTGGCAGGTCTaGCACGTGTTGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: AGWWPDPAAPGVCRSAWRRIWQV*HVLVKM
Trigger: CATCTTCACCAACACGTGCAAGACCTGCCAGATTCT...GCGCCACGCTGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CCCGGCGTGGCGATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCAGAATCTGGCAGGTCTaGCACGTGTTGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: PGVAMTTCGFRESSSAWARIWQV*HVLVKM
Trigger: CATCTTCACCAACACGTGCAAGACCTGCCAGATTCT...GGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCATCGCCACGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR CAA 90 bp AGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGGGGAGGCCACGTCTGTaGCGATCAGGATCCGGTAGA +
Preference number: 5 (lower is better)
Translates to: RFLRPSAPWTSQGLGRWPGRPRL*RSGSGR
Trigger: TCTACCGGATCCTGATCGCAACAGACGTGGCCTCCC...CGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TGTGTCGGTCAGCGTGGCGCTGAACAGCAGTGTCTGCCTGCGGGCCGGCACAGCTCTCTTCGCACCACGTaGACCTGTGTGAGGATCTGT +
Preference number: 5 (lower is better)
Translates to: CVGQRGAEQQCLPAGRHSSLRTT*TCVRIC
Trigger: ACAGATCCTCACACAGGTCAACGTGGTGCGAAGAGA...GCTGTGCCGGCCCGCAGGCAGACACTGCTGTTCAGCGCCACGCTGACCGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GCACGTGTTGGTGAAGATGATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGCTGGGTGGACGCCCCTaGTGGCCAGCCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: ARVGEDDNGPVLVLILEALGGRP*WPALPA
Trigger: GGCTGGCAGGGCTGGCCACAAGGGGCGTCCACCCAG...CGCTTCCAGGATGAGCACGAGGACTGGTCCATTATCATCTTCACCAACACGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS CCA 90 bp CTGAAGCAGGCCTCTTTGAGAGGCATGGACATGGACCCTAGGCCCTaGAGTACCCTCCTTCCAAGGGAGGCCTGCCCCTCACCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: LKQASLRGMDMDPRP*STLLPREACPSPKS
Trigger: AGACTTGGGTGAGGGGCAGGCCTCCCTTGGAAGGAGGGTACTCCAGGGCCTAGGGTCCATGTCCATGCCTCTCAAAGAGGCCTGCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601803.5
CDS-3UTR CAA 90 bp TCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGCAGGTCTTGCACGTGTaGGTGAAGATGATAATGGAC +
Preference number: 5 (lower is better)
Translates to: SGQRSRARTTRAPTGSAVQVLHV*VKMIMD
Trigger: GTCCATTATCATCTTCACCAACACGTGCAAGACCTG...CACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCGTGGGGAAGCTGAATTaGCGCAGCATCATGCACAGA +
Preference number: 5 (lower is better)
Translates to: RGLCFPEEGLVGGQTLQLVGKLN*RSIMHR
Trigger: TCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCAC...GAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TCAGGGAAGGGACCAGCCAGTGGTTTCGGGGCAGAGGAGCAGGGCCCGCACAACGTGGGGAAGCTGAATTaGCGCAGCATCATGCACAGA +
Preference number: 5 (lower is better)
Translates to: SGKGPASGFGAEEQGPHNVGKLN*RSIMHR
Trigger: TCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCAC...GTTGTGCGGGCCCTGCTCCTCTGCCCCGAAACCACTGGCTGGTCCCTTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp ATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTTGGGCCGCCTCCAGTTaGATCTCACACTCTCTTCGC +
Preference number: 5 (lower is better)
Translates to: MASRSTVKSVQPCSSSRSWAASS*ISHSLR
Trigger: GCGAAGAGAGTGTGAGATCAAACTGGAGGCGGCCCA...AGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GCCCAGAGAAGGGGCTTCAGGGCCCAAAATCCCATGGCCATTCGAGCAGCTGGTCGCCGGTTCTTCTGCTaGATCTTGGCCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: AQRRGFRAQNPMAIRAAGRRFFC*ILASSA
Trigger: GGCTGAGCTGGCCAAGATCAAGCAGAAGAACCGGCG...ACCAGCTGCTCGAATGGCCATGGGATTTTGGGCCCTGAAGCCCCTTCTCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CAA 90 bp CACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCTGCACCGGGGCCATCTaGTTTAATTCTGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: HSRQDGLQVHGEVSAALFCTGAI*FNSAGP
Trigger: GGGTCCTGCAGAATTAAACAAGATGGCCCCGGTGCA...GAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593361.5
ENST00000595858.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GCAAAGCGTTCTTTCTGCTTCATCATGGAGTGCAGAGCCACGGTGGGGAAGCTGCGAAGCCTGCCATCCTaGTGGCCGCTTGTAGGGGCC +
Preference number: 5 (lower is better)
Translates to: AKRSFCFIMECRATVGKLRSLPS*WPLVGA
Trigger: GGCCCCTACAAGCGGCCACAAGGATGGCAGGCTTCG...CAGCTTCCCCACCGTGGCTCTGCACTCCATGATGAAGCAGAAAGAACGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CAA 90 bp TTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGACGATGATCCGGGGGTGTTGTGGTaGATGACCACCTGTACCGTA +
Preference number: 5 (lower is better)
Translates to: FPRELQRLGHHVHATDDDPGVLW*MTTCTV
Trigger: TACGGTACAGGTGGTCATCAACCACAACACCCCCGG...ATCATCGTCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR CAA 90 bp TCGGGGCAGAGGAGCAGGGCCCGCACAACACGAGCGCCCACGGGTTCTGCTGTGATCAGCTGCTTCCGTTaGTTGATCTCCTTCTTTTCG +
Preference number: 5 (lower is better)
Translates to: SGQRSRARTTRAPTGSAVISCFR*LISFFS
Trigger: CGAAAAGAAGGAGATCAACAAACGGAAGCAGCTGAT...CACAGCAGAACCCGTGGGCGCTCGTGTTGTGCGGGCCCTGCTCCTCTGCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGTCTCTGCCTGTCCCCTaGGGCTTAGCCCACATTGTC +
Preference number: 5 (lower is better)
Translates to: CPQGRFLRPSAPWTSQGLSLPVP*GLAHIV
Trigger: GACAATGTGGGCTAAGCCCAAGGGGACAGGCAGAGA...CAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CAA 90 bp TCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCATTTCCCTGCGTCTTTTaGGGTGCCCCTGAATCCATG +
Preference number: 5 (lower is better)
Translates to: SPGPVLPRRRAGWWPDPAFPCVF*GAPESM
Trigger: CATGGATTCAGGGGCACCCAAAAAGACGCAGGGAAA...TGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CAA 90 bp AAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGGAGGCCACGTCTGTaGCGATCAGGATCCGGTAGA +
Preference number: 5 (lower is better)
Translates to: KEGSSDPQLHGRVKDWADGRPRL*RSGSGR
Trigger: TCTACCGGATCCTGATCGCAACAGACGTGGCCTCCC...ATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAGCCCCGGGGGTGTTGTGGTaGATGACCACCTGTACCGTA +
Preference number: 5 (lower is better)
Translates to: DLGLGSQPPGHVLSSPAAPGVLW*MTTCTV
Trigger: TACGGTACAGGTGGTCATCAACCACAACACCCCCGG...GGCTGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TGCCCCCAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGTCCTCCAGCTTCTTCTaGATCTGCTCCTCGATGGCG +
Preference number: 5 (lower is better)
Translates to: CPQGRFLRPSAPWTSQGLSSSFF*ICSSMA
Trigger: CGCCATCGAGGAGCAGATCAAGAAGAAGCTGGAGGA...CAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp AGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGGCCGTCTCTTCGCACCACGTaGACCTGTGTGAGGATCTGT +
Preference number: 5 (lower is better)
Translates to: RFLRPSAPWTSQGLGRWPSLRTT*TCVRIC
Trigger: ACAGATCCTCACACAGGTCAACGTGGTGCGAAGAGA...CGGCCATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGCTGGTCCAGCTGCTCCACGGTTCTCTTCGCACCACGTaGACCTGTGTGAGGATCTGT +
Preference number: 5 (lower is better)
Translates to: VLDLLRHQQVALVQLLHGSLRTT*TCVRIC
Trigger: ACAGATCCTCACACAGGTCAACGTGGTGCGAAGAGA...ACCGTGGAGCAGCTGGACCAGCGCTACCTGCTGGTGCCTGAGAAGGTCAAGGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS GCA 90 bp TTAATTCTGCAGGACCCCTGGTGGGTGTCAGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACAGCTTCCTCCAGGATGGCGGGGATG +
Preference number: 5 (lower is better)
Translates to: LILQDPWWVSGRGRR*HRDPQTASSRMAGM
Trigger: CATCCCCGCCATCCTGGAGGAAGCTGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCCTGACACCCACCAGGGGTCCTGCAGAATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593361.5
CDS GCA 90 bp CGCCTGGGCCACCATGTCTGGTGGGTGTCAGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACAGCTTCTGCAAGATGGGAAGGACAA +
Preference number: 5 (lower is better)
Translates to: RLGHHVWWVSGRGRR*HRDPQTASARWEGQ
Trigger: TTGTCCTTCCCATCTTGCAGAAGCTGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCCTGACACCCACCAGACATGGTGGCCCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598972.5
CDS-3UTR CAA 90 bp CAAGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATCCTCCAGCTTCTTCTaGATCTGCTCCTCGATGGCG +
Preference number: 5 (lower is better)
Translates to: QGRFLRPSAPWTSQGLGRSSSFF*ICSSMA
Trigger: CGCCATCGAGGAGCAGATCAAGAAGAAGCTGGAGGA...TCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCCTGCAGCTCAGCTGCTTCCGTTTGTaGATCTCCTTCTTTTCGTCA +
Preference number: 5 (lower is better)
Translates to: RGLCFPEEGLVGGQTLQLSCFRL*ISFFSS
Trigger: TGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCT...GAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGCCAGACCAGCTGCTTCCGTTTGTaGATCTCCTTCTTTTCGTCA +
Preference number: 5 (lower is better)
Translates to: GAHRGLCFPEEGLVGGQTSCFRL*ISFFSS
Trigger: TGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCT...GGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GCTCCACGGTGCTCACCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTGGATCAGCTGCTTCCGTTaGTTGATCTCCTTCTTTTCG +
Preference number: 5 (lower is better)
Translates to: APRCSPGPVLPRRRAGWWISCFR*LISFFS
Trigger: CGAAAAGAAGGAGATCAACAAACGGAAGCAGCTGAT...CCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGGTGAGCACCGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GATCAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAGCGAGAATCTGGCAGGTCTaGCACGTGTTGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: DQVDQVGVLDLLRHQQVARIWQV*HVLVKM
Trigger: CATCTTCACCAACACGTGCAAGACCTGCCAGATTCT...CGCTACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CACAGCCGCCAGGATGGCCTCCAGGTCCACGGTGAAGTCAGTGCAGCCCTGTTCAGCTGCTTCCGTTTGTaGATCTCCTTCTTTTCGTCA +
Preference number: 5 (lower is better)
Translates to: HSRQDGLQVHGEVSAALFSCFRL*ISFFSS
Trigger: TGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCT...GAACAGGGCTGCACTGACTTCACCGTGGACCTGGAGGCCATCCTGGCGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CGTGTGGTTTCCGAGAGAGCTCCAGCGCCTGGGCCACCATGTCCATGCCACCGAATCAGCTGCTTCCGTTaGTTGATCTCCTTCTTTTCG +
Preference number: 5 (lower is better)
Translates to: RVVSERAPAPGPPCPCHRISCFR*LISFFS
Trigger: CGAAAAGAAGGAGATCAACAAACGGAAGCAGCTGAT...TCGGTGGCATGGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS-3UTR CAA 90 bp CTGGATCAGGTGGACCAGGTAGGCGTCCTTGACCTTCTCAGGCACCAGCAGGTAAGAATCTGGCAGGTCTaGCACGTGTTGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: LDQVDQVGVLDLLRHQQVRIWQV*HVLVKM
Trigger: CATCTTCACCAACACGTGCAAGACCTGCCAGATTCT...TACCTGCTGGTGCCTGAGAAGGTCAAGGACGCCTACCTGGTCCACCTGATCCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp ATGATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGCTGGATCAGGTGGACCTCCTCCAGCTTCTTCTaGATCTGCTCCTCGATGGCG +
Preference number: 5 (lower is better)
Translates to: MIMDQSSCSSWKRWIRWTSSSFF*ICSSMA
Trigger: CGCCATCGAGGAGCAGATCAAGAAGAAGCTGGAGGA...GGTCCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCATTATCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TTGGGGAGCCCGGGGGTGTTGTGGTTGATGACCACCTGTACCGTAGGGATGTCCATTGTCTGGCCAAATTaGGACTTTCATGGCCCCTTC +
Preference number: 5 (lower is better)
Translates to: LGSPGVLWLMTTCTVGMSIVWPN*DFHGPF
Trigger: GAAGGGGCCATGAAAGTCCAAATTTGGCCAGACAAT...GGACATCCCTACGGTACAGGTGGTCATCAACCACAACACCCCCGGGCTCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CAA 90 bp AGGAAGGTTCCTCCGACCCTCAGCTCCATGGACGAGTCAAGGACTGGGCAGATGCAGGTCTTGCACGTGTaGGTGAAGATGATAATGGAC +
Preference number: 5 (lower is better)
Translates to: RKVPPTLSSMDESRTGQMQVLHV*VKMIMD
Trigger: GTCCATTATCATCTTCACCAACACGTGCAAGACCTG...CATCTGCCCAGTCCTTGACTCGTCCATGGAGCTGAGGGTCGGAGGAACCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp AAGATGATAATGGACCAGTCCTCGTGCTCATCCTGGAAGCGCTGGATCAGGTGGATGCTGGACTTGAACTaGGCTAGGGCGGCAAAGCGT +
Preference number: 5 (lower is better)
Translates to: KMIMDQSSCSSWKRWIRWMLDLN*ARAAKR
Trigger: ACGCTTTGCCGCCCTAGCCAAGTTCAAGTCCAGCAT...CCACCTGATCCAGCGCTTCCAGGATGAGCACGAGGACTGGTCCATTATCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TCCACGGTGAAGTCAGTGCAGCCCTGTTCCAGCAGCCGGTCTGCCTCATCCATCATCAGCTGCTTCCGTTaGTTGATCTCCTTCTTTTCG +
Preference number: 5 (lower is better)
Translates to: STVKSVQPCSSSRSASSIISCFR*LISFFS
Trigger: CGAAAAGAAGGAGATCAACAAACGGAAGCAGCTGAT...GATGGATGAGGCAGACCGGCTGCTGGAACAGGGCTGCACTGACTTCACCGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TGGTGTCTCTCTGCCTGTCCCCTTGGGCTTAGCCCACATTGTCTGGCCAAATTTTGGAGAGCAGGGCAGTaGCTATGCCCATTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: WCLSACPLGLSPHCLAKFWRAGQ*LCPFSR
Trigger: TCTGGAGAATGGGCATAGCAACTGCCCTGCTCTCCA...AAATTTGGCCAGACAATGTGGGCTAAGCCCAAGGGGACAGGCAGAGAGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS TCA 90 bp AGCGTTTTACTGGACAGTCTAACGGACATACGTTTCCTAAATGGATaGGATGGTGCCCCAGGCTCTGACATTGGGCCTGGAGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: SVLLDSLTDIRFLNG*DGAPGSDIGPGGSE
Trigger: CTCGGAGCCTCCAGGCCCAATGTCAGAGCCTGGGGCACCATCTCATCCATTTAGGAAACGTATGTCCGTTAGACTGTCCAGTAAAACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599373.5
ENST00000601803.5
CDS GCA 90 bp TTAATTCTGCAGGACCCCTGGTGGGTGTCAGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACAGCTTCTGCAAGATGGGAAGGACAA +
Preference number: 5 (lower is better)
Translates to: LILQDPWWVSGRGRR*HRDPQTASARWEGQ
Trigger: TTGTCCTTCCCATCTTGCAGAAGCTGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCCTGACACCCACCAGGGGTCCTGCAGAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000599373.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GTGGGGAAGCTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGGGGAAGCTGAATTaGCGCAGCATCATGCACAGA +
Preference number: 5 (lower is better)
Translates to: VGKLNLRSIMHRIWQVLHVGKLN*RSIMHR
Trigger: TCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCAC...GTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGAAGATGATGCTGGACTTGAACTaGGCTAGGGCGGCAAAGCGT +
Preference number: 5 (lower is better)
Translates to: LRSIMHRIWQVLHVLVKMMLDLN*ARAAKR
Trigger: ACGCTTTGCCGCCCTAGCCAAGTTCAAGTCCAGCAT...CATCTTCACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp CTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGGCAGTTATAAGCCGCTaGCAGATGAGGGGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LNLRSIMHRIWQVLHVLVAVISR*QMRGEA
Trigger: AGCCTCACCCCTCATCTGCAAGCGGCTTATAACTGC...CACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS-3UTR CAA 90 bp TGGCAGGTCTTGCACGTGTTGGTGAAGATGATAATGGACCAGTCCTCGTGCTCAGTGGGGAAGCTGAATTaGCGCAGCATCATGCACAGA +
Preference number: 5 (lower is better)
Translates to: WQVLHVLVKMIMDQSSCSVGKLN*RSIMHR
Trigger: TCTGTGCATGATGCTGCGCAAATTCAGCTTCCCCAC...TGAGCACGAGGACTGGTCCATTATCATCTTCACCAACACGTGCAAGACCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595858.5
ENST00000598972.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp TTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGAAGATGTCTCTTCGCACCACGTaGACCTGTGTGAGGATCTGT +
Preference number: 5 (lower is better)
Translates to: LRSIMHRIWQVLHVLVKMSLRTT*TCVRIC
Trigger: ACAGATCCTCACACAGGTCAACGTGGTGCGAAGAGA...CATCTTCACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GGTGACCTTGGGTTGGGGTCACAACCTCCCGGTCATGTTCTTTCTTCCCCTGCAAGCTGCTTCCGTTTGTaGATCTCCTTCTTTTCGTCA +
Preference number: 5 (lower is better)
Translates to: GDLGLGSQPPGHVLSSPASCFRL*ISFFSS
Trigger: TGACGAAAAGAAGGAGATCAACAAACGGAAGCAGCT...TGCAGGGGAAGAAAGAACATGACCGGGAGGTTGTGACCCCAACCCAAGGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000247003.9
ENST00000595858.5
ENST00000602113.5
ENST00000629999.3
CDS-3UTR CAA 90 bp GCTGAATTTGCGCAGCATCATGCACAGAATCTGGCAGGTCTTGCACGTGTTGGTGGTGTCTGCAAAACTTaGGGCCTGCCTGGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: AEFAQHHAQNLAGLARVGGVCKT*GLPGGN
Trigger: ATTTCCACCAGGCAGGCCCAAAGTTTTGCAGACACC...ACCAACACGTGCAAGACCTGCCAGATTCTGTGCATGATGCTGCGCAAATTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629999.3
CDS TCA 72 bp TCTGACATTGGGCCTGGAGGCTCCGAGCCCAGCTCCTaGGGTCTGCAGGGGCGGGGCGAACTCACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SDIGPGGSEPSS*GLQGRGELTRK
Trigger: CTTCCTGGTGAGTTCGCCCCGCCCCTGCAGACCTCAGGAGCTGGGCTCGGAGCCTCCAGGCCCAATGTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599373.5
ENST00000601803.5
CDS GCA 72 bp AGCCCAAGCAGTCTCGACCCTCCAGGATGGCGGGGATaGAGCCGAGCTGCACGGGCGTGGGCTGCTTCAAAC +
Preference number: 6 (lower is better)
Translates to: SPSSLDPPGWRG*SRAARAWAASN
Trigger: GTTTGAAGCAGCCCACGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGGAGGGTCGAGACTGCTTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000247003.9
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000599373.5
ENST00000599981.5
ENST00000629999.3
CDS GCA 72 bp CCGAGCTGCACGGGCGTGGGCTGCTTCAAACCCAGCTaGCGACATTGTTCCACGAGCCACGATGACAGCCCG +
Preference number: 6 (lower is better)
Translates to: PSCTGVGCFKPS*RHCSTSHDDSP
Trigger: CGGGCTGTCATCGTGGCTCGTGGAACAATGTCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCAGCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000247003.9
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000599373.5
ENST00000599981.5
ENST00000602113.5
ENST00000629999.3
CDS GCA 72 bp ATGGCGGGGATGCAGCCGAGCTGCACGGGCGTGGGCTaGTTCAAACCCAGCTGCCGACATTGTTCCACGAGC +
Preference number: 6 (lower is better)
Translates to: MAGMQPSCTGVG*FKPSCRHCSTS
Trigger: GCTCGTGGAACAATGTCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCAGCTCGGCTGCATCCCCGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000247003.9
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000599373.5
ENST00000599981.5
ENST00000602113.5
ENST00000629999.3
CDS CCA 72 bp CCAGGATGGCGGGGATGCAGCCGAGCTGCACGGGCGTaGGCTGCTTCAAACCCAGCTGCCGACATTGTTCCA +
Preference number: 6 (lower is better)
Translates to: PGWRGCSRAARA*AASNPAADIVP
Trigger: TGGAACAATGTCGGCAGCTGGGTTTGAAGCAGCCCACGCCCGTGCAGCTCGGCTGCATCCCCGCCATCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000247003.9
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000599373.5
ENST00000599981.5
ENST00000602113.5
ENST00000629999.3
CDS CCA 72 bp TCGGGGCCTGTGCTTCCCAGAAGAAGGGCTGGTTGGTaGCCAGACCCTGCAGCTCCCGGAGTGTGTCGGTCA +
Preference number: 6 (lower is better)
Translates to: SGPVLPRRRAGW*PDPAAPGVCRS
Trigger: TGACCGACACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599156.5
CDS CCA 72 bp GTGCTCATCGGGGCCTGTGCTTCCCAGAAGAAGGGCTaGTTGGTGGCCAGACCCTGCAGCTCCCGGAGTGTG +
Preference number: 6 (lower is better)
Translates to: VLIGACASQKKG*LVARPCSSRSV
Trigger: CACACTCCGGGAGCTGCAGGGTCTGGCCACCAACCAGCCCTTCTTCTGGGAAGCACAGGCCCCGATGAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599156.5
CDS CAA 90 bp GCCGTCCATGGCCCCGGGTCTTGGCCACCCCTGAAGCAGGCCTCTTaGAGAGGCATGGACATGGACCCTAGGCCCTGGAGTACCCTCCTT +
Preference number: 6 (lower is better)
Translates to: AVHGPGSWPPLKQAS*RGMDMDPRPWSTLL
Trigger: AAGGAGGGTACTCCAGGGCCTAGGGTCCATGTCCATGCCTCTCAAAGAGGCCTGCTTCAGGGGTGGCCAAGACCCGGGGCCATGGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601803.5
CDS CAA 90 bp CTCTCATCTGTGGGCTGCACCCTACCCACGTCCTACCACCTGAATTaGCTGGGCAGGCTGGAGGGACAGAGGCCCAAGGCTCGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: LSSVGCTLPTSYHLN*LGRLEGQRPKARPP
Trigger: GGGAGGCCGAGCCTTGGGCCTCTGTCCCTCCAGCCTGCCCAGCAAATTCAGGTGGTAGGACGTGGGTAGGGTGCAGCCCACAGATGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601803.5
CDS TCA 72 bp CCCGCCTCCCAGCTCCCGTACCCATGCCACCGACGATaGTGCAGTCTTTCAGCCCTAGAGGCTTCCCCAGGA +
Preference number: 6 (lower is better)
Translates to: PASQLPYPCHRR*CSLSALEASPG
Trigger: TCCTGGGGAAGCCTCTAGGGCTGAAAGACTGCATCATCGTCGGTGGCATGGGTACGGGAGCTGGGAGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599373.5
ENST00000599981.5
CDS CCA 72 bp ATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTaGGCCACCATGTCTGGGGGACAGAGCATGAGAGGC +
Preference number: 6 (lower is better)
Translates to: MTTCGFRESSSA*ATMSGGQSMRG
Trigger: GCCTCTCATGCTCTGTCCCCCAGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000599373.5
ENST00000599981.5
ENST00000601803.5
CDS CCA 72 bp ATGACCACGTGTGGTTTCCGAGAGAGCTCCAGCGCCTaGGCCACCATGTCTGGTGGGTGTCAGGACGAGGCA +
Preference number: 6 (lower is better)
Translates to: MTTCGFRESSSA*ATMSGGCQDEA
Trigger: TGCCTCGTCCTGACACCCACCAGACATGGTGGCCCAGGCGCTGGAGCTCTCTCGGAAACCACACGTGGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598972.5
CDS CCA 72 bp GCCTCTTTGAGAGGCATGGACATGGACCCTAGGCCCTaGAGTACCCTCCTTCCAAGGGAGGCCTGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: ASLRGMDMDPRP*STLLPREACPS
Trigger: TGAGGGGCAGGCCTCCCTTGGAAGGAGGGTACTCCAGGGCCTAGGGTCCATGTCCATGCCTCTCAAAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601803.5
CDS TCA 72 bp CAAACCCAGCTGCCGACATTGTTCCACGAGCCACGATaGCAGCCCGAGCTCCGCGAAGCCTGCCATCCTTGT +
Preference number: 6 (lower is better)
Translates to: QTQLPTLFHEPR*QPELREACHPC
Trigger: ACAAGGATGGCAGGCTTCGCGGAGCTCGGGCTGTCATCGTGGCTCGTGGAACAATGTCGGCAGCTGGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000247003.9
ENST00000593361.5
ENST00000594021.5
ENST00000595858.5
ENST00000598972.5
ENST00000599373.5
ENST00000599981.5
ENST00000629999.3
CDS CCA 72 bp CTTGTAGTAAAAGAGGGAGTGCCCTTGGCAGGAGACTaGGGGCTGCTCACCGGGAGGCCACGTCTGTTGCGA +
Preference number: 6 (lower is better)
Translates to: LVVKEGVPLAGD*GLLTGRPRLLR
Trigger: TCGCAACAGACGTGGCCTCCCGGTGAGCAGCCCCCAGTCTCCTGCCAAGGGCACTCCCTCTTTTACTACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598277.5
ENST00000601803.5
CDS TCA 72 bp ACGTTTCCTAAATGGATGAGATGGTGCCCCAGGCTCTaGCATTGGGCCTGGAGGCTCCGAGCCCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: TFPKWMRWCPRL*HWAWRLRAQLL
Trigger: CAGGAGCTGGGCTCGGAGCCTCCAGGCCCAATGTCAGAGCCTGGGGCACCATCTCATCCATTTAGGAAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599373.5
ENST00000601803.5
CDS GCA 72 bp CAGGACCCCTGGTGGGTGTCAGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACAGCTTCCTCCAGGATG +
Preference number: 6 (lower is better)
Translates to: QDPWWVSGRGRR*HRDPQTASSRM
Trigger: CATCCTGGAGGAAGCTGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCCTGACACCCACCAGGGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593361.5
CDS GCA 72 bp CCAGCTCCCTGGTGGGTGTCAGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACAGCTTCCTCCAGGATG +
Preference number: 6 (lower is better)
Translates to: PAPWWVSGRGRR*HRDPQTASSRM
Trigger: CATCCTGGAGGAAGCTGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCCTGACACCCACCAGGGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602113.5
CDS GCA 72 bp CCAGCTCCCTGGTGGGTGTCAGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACAGCTTCTGCAAGATGG +
Preference number: 6 (lower is better)
Translates to: PAPWWVSGRGRR*HRDPQTASARW
Trigger: CCATCTTGCAGAAGCTGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCCTGACACCCACCAGGGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000247003.9
ENST00000599981.5
CDS GCA 72 bp CAGGACCCCTGGTGGGTGTCAGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACAGCTTCTGCAAGATGG +
Preference number: 6 (lower is better)
Translates to: QDPWWVSGRGRR*HRDPQTASARW
Trigger: CCATCTTGCAGAAGCTGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCCTGACACCCACCAGGGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595858.5
ENST00000599373.5
ENST00000629999.3
CDS GCA 72 bp CACCATGTCTGGTGGGTGTCAGGACGAGGCAGAAGATaGCATAGGGATCCTCAGACAGCTTCTGCAAGATGG +
Preference number: 6 (lower is better)
Translates to: HHVWWVSGRGRR*HRDPQTASARW
Trigger: CCATCTTGCAGAAGCTGTCTGAGGATCCCTATGGCATCTTCTGCCTCGTCCTGACACCCACCAGACATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598972.5
CDS CAA 72 bp CCCCGAATAACATTGCTAGGACTGGGCCCCCTCTTGTaGGTCCTTGAACGGTCCTTGTCACTGTTCCTAGCG +
Preference number: 6 (lower is better)
Translates to: PRITLLGLGPLL*VLERSLSLFLA
Trigger: CGCTAGGAACAGTGACAAGGACCGTTCAAGGACCAACAAGAGGGGGCCCAGTCCTAGCAATGTTATTCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601803.5
CDS CAA 72 bp ACCCAAGTCTCAGCAAGGCCCTACCCCCGAATAACATaGCTAGGACTGGGCCCCCTCTTGTTGGTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: TQVSARPYPRIT*LGLGPLLLVLE
Trigger: TTCAAGGACCAACAAGAGGGGGCCCAGTCCTAGCAATGTTATTCGGGGGTAGGGCCTTGCTGAGACTTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601803.5
CDS TCA 72 bp CTGGACAGTCTAACGGACATACGTTTCCTAAATGGATaGGATGGTGCCCCAGGCTCTGACATTGGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: LDSLTDIRFLNG*DGAPGSDIGPG
Trigger: TCCAGGCCCAATGTCAGAGCCTGGGGCACCATCTCATCCATTTAGGAAACGTATGTCCGTTAGACTGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599373.5
ENST00000601803.5
CDS CAA 72 bp TACCCCCGAATAACATTGCTAGGACTGGGCCCCCTCTaGTTGGTCCTTGAACGGTCCTTGTCACTGTTCCTA +
Preference number: 6 (lower is better)
Translates to: YPRITLLGLGPL*LVLERSLSLFL
Trigger: TAGGAACAGTGACAAGGACCGTTCAAGGACCAACAAGAGGGGGCCCAGTCCTAGCAATGTTATTCGGGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601803.5
CDS TCA 72 bp AACATTGCTAGGACTGGGCCCCCTCTTGTTGGTCCTTaGACGGTCCTTGTCACTGTTCCTAGCGTTTTACTG +
Preference number: 6 (lower is better)
Translates to: NIARTGPPLVGP*TVLVTVPSVLL
Trigger: CAGTAAAACGCTAGGAACAGTGACAAGGACCGTTCAAGGACCAACAAGAGGGGGCCCAGTCCTAGCAATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601803.5