Pregenerated sensors for DDX47 (Homo sapiens)
Ensembl gene IDs: ENSG00000213782Ensembl transcript IDs: ENST00000352940.8, ENST00000358007.7, ENST00000392155.2, ENST00000426619.6, ENST00000535722.1, ENST00000541537.5, ENST00000542123.5, ENST00000544032.5, ENST00000544400.1, ENST00000544497.1, ENST00000545038.5
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ATCTCTGTTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAACCTCCGGAAGTGGGTCTaGGGCGCGCGGGATGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ISVGAGFILQFSFTEQQNLRKWV*GARDAG Trigger: CCCAGCATCCCGCGCGCCGCAGACCCACTTCCGGAG...GTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAACAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352940.8 |
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| CDS-3UTR GCA 90 bp | GTCATGAGCAAGGAATCAAAGTCGAAGAACAGTAACAGTCTTGACATCAGCACTAGGGCAAACAAACGCTaGGGGGTCTCCAGCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: VMSKESKSKNSNSLDISTRANKR*GVSSSA Trigger: CGCACTGCTGGAGACCCCGCAGCGTTTGTTTGCCCT...AGTGCTGATGTCAAGACTGTTACTGTTCTTCGACTTTGATTCCTTGCTCATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR GCA 90 bp | GAATTAGCTGAGCACATTCTGGACACAATTCTGACCAATTTCAGTCTCATGATCAGGGCAAACAAACGCTaGGGGGTCTCCAGCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: ELAEHILDTILTNFSLMIRANKR*GVSSSA Trigger: CGCACTGCTGGAGACCCCGCAGCGTTTGTTTGCCCT...GATCATGAGACTGAAATTGGTCAGAATTGTGTCCAGAATGTGCTCAGCTAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | AGTGACAGAAGAGCACACCCTACTCATGTCATGAGCAAGGAATCAAAGTCGAAGATTCGGGCAAACCTTTaGGCTTCAGCGACGCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SDRRAHPTHVMSKESKSKIRANL*ASATRS Trigger: AGAACGCGTCGCTGAAGCCCAAAGGTTTGCCCGAAT...CTTCGACTTTGATTCCTTGCTCATGACATGAGTAGGGTGTGCTCTTCTGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | GCACACCCTACTCATGTCATGAGCAAGGAATCAAAGTCGAAGAACAGTAACAGTGCAGTGCGTTTAGAATaGGCAAAGCAAAGGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: AHPTHVMSKESKSKNSNSAVRLE*AKQRRL Trigger: CAGGCGCCTTTGCTTTGCCCATTCTAAACGCACTGC...ACTGTTACTGTTCTTCGACTTTGATTCCTTGCTCATGACATGAGTAGGGTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | TTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAACTCGAGCCATTCGGGCAAACCTTTaGGCTTCAGCGACGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEQVSFSNSLLQNSRTRAIRANL*ASATRS Trigger: AGAACGCGTCGCTGAAGCCCAAAGGTTTGCCCGAAT...GGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR GCA 90 bp | TTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAACTCGAGCCACAATCACAGCACTCTaGACTCCAATAGAGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEQVSFSNSLLQNSRTRATITAL*TPIEDP Trigger: GGGGTCCTCTATTGGAGTGCAGAGTGCTGTGATTGT...GGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | ATCTCTGTTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAACTCTTCCACAATCGGCTaGGACGCTTCGGTCGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISVGAGFILQFSFTEQQNSSTIG*DASVGE Trigger: TTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGA...GTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAACAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR GCA 90 bp | GTCATGAGCAAGGAATCAAAGTCGAAGAACAGTAACAGTCTTGACATCAGCACTACAATCACAGCACTCTaGACTCCAATAGAGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: VMSKESKSKNSNSLDISTTITAL*TPIEDP Trigger: GGGGTCCTCTATTGGAGTGCAGAGTGCTGTGATTGT...AGTGCTGATGTCAAGACTGTTACTGTTCTTCGACTTTGATTCCTTGCTCATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | TTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAACTCGAGCCTTTGTCCATCCCAACTaGTCACAAGCTTCACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LEQVSFSNSLLQNSRTRAFVHPN*SQASHN Trigger: GTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAA...GGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | GCAGATGTCCAAGCTTCTTTACAATTACAGGTCATGGGCATCATCAACCTAGTCCTTCAATCTGGATCTTaGTGGGTTTTGTCCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ADVQASLQLQVMGIINLVLQSGS*WVLSIP Trigger: TGGGATGGACAAAACCCACCAAGATCCAGATTGAAG...GACTAGGTTGATGATGCCCATGACCTGTAATTGTAAAGAAGCTTGGACATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | GTCATGAGCAAGGAATCAAAGTCGAAGAACAGTAACAGTCTTGACATCAGCACTGAACCTTCTTGGTCATaGTGGCAGAGAAGAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VMSKESKSKNSNSLDISTEPSWS*WQRRGM Trigger: CATTCCTCTTCTCTGCCACCATGACCAAGAAGGTTC...AGTGCTGATGTCAAGACTGTTACTGTTCTTCGACTTTGATTCCTTGCTCATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | GATCTCTGTTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAATGTCCAAACCTCGGCTaGCAACGTCAGTTGCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: DLCWSRFHSPILFYRTAECPNLG*QRQLLE Trigger: TTCTAGCAACTGACGTTGCCAGCCGAGGTTTGGACA...TTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAACAGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR GCA 90 bp | ATCTCTGTTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAACTCCAGAGCCAGTTTCTaGAAGCCCAATGATATCACG | + |
|
Preference number: 4 (lower is better) Translates to: ISVGAGFILQFSFTEQQNSRASF*KPNDIT Trigger: CGTGATATCATTGGGCTTGCAGAAACTGGCTCTGGA...GTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAACAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR GCA 90 bp | GAATTAGCTGAGCACATTCTGGACACAATTCTGACCAATTTCAGTCTCATGATCTCCAGAGCCAGTTTCTaGAAGCCCAATGATATCACG | + |
|
Preference number: 4 (lower is better) Translates to: ELAEHILDTILTNFSLMISRASF*KPNDIT Trigger: CGTGATATCATTGGGCTTGCAGAAACTGGCTCTGGA...GATCATGAGACTGAAATTGGTCAGAATTGTGTCCAGAATGTGCTCAGCTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | TTAAATATCATTTGCAGATGTCCAAGCTTCTTTACAATTACAGGTCATGGGCATTCTTCCACAATCGGCTaGGACGCTTCGGTCGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNIICRCPSFFTITGHGHSSTIG*DASVGE Trigger: TTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGA...ATGCCCATGACCTGTAATTGTAAAGAAGCTTGGACATCTGCAAATGATATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | GTCATGAGCAAGGAATCAAAGTCGAAGAACAGTAACAGTCTTGACATCAGCACTTTTGTCCATCCCAACTaGTCACAAGCTTCACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VMSKESKSKNSNSLDISTFVHPN*SQASHN Trigger: GTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAA...AGTGCTGATGTCAAGACTGTTACTGTTCTTCGACTTTGATTCCTTGCTCATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | GCAGATGTCCAAGCTTCTTTACAATTACAGGTCATGGGCATCATCAACCTAGTCTTCGTATTTTCCAAGTaGTCAATCAGTCGACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ADVQASLQLQVMGIINLVFVFSK*SISRPG Trigger: TCCTGGTCGACTGATTGACCACTTGGAAAATACGAA...GACTAGGTTGATGATGCCCATGACCTGTAATTGTAAAGAAGCTTGGACATCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | GATCTCTGTTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAAGAACCTTCTTGGTCATaGTGGCAGAGAAGAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: DLCWSRFHSPILFYRTAEEPSWS*WQRRGM Trigger: CATTCCTCTTCTCTGCCACCATGACCAAGAAGGTTC...TTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAACAGAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | TCATTCTCCAATTCTCTTTTACAGAACAGCAGAACTCGAGCCTTCATAAAAGTGTGTCCAAACCTCGGCTaGCAACGTCAGTTGCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFSNSLLQNSRTRAFIKVCPNLG*QRQLLE Trigger: TTCTAGCAACTGACGTTGCCAGCCGAGGTTTGGACA...CACTTTTATGAAGGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | GCAGATGTCCAAGCTTCTTTACAATTACAGGTCATGGGCATCATCAACCTAGTCAAGTGTTCTATGCGCTaGAAGAGTTCCACATCATAC | + |
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Preference number: 4 (lower is better) Translates to: ADVQASLQLQVMGIINLVKCSMR*KSSTSY Trigger: GTATGATGTGGAACTCTTCCAGCGCATAGAACACTT...GACTAGGTTGATGATGCCCATGACCTGTAATTGTAAAGAAGCTTGGACATCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | TTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAACTCGAGCCTCTCATGATCTCTGTTaGAGCAGGTTTCATTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LEQVSFSNSLLQNSRTRASHDLC*SRFHSP Trigger: TGGAGAATGAAACCTGCTCCAACAGAGATCATGAGA...GGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | TTAAATATCATTTGCAGATGTCCAAGCTTCTTTACAATTACAGGTCATGGGCATGCAGTGCGTTTAGAATaGGCAAAGCAAAGGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LNIICRCPSFFTITGHGHAVRLE*AKQRRL Trigger: CAGGCGCCTTTGCTTTGCCCATTCTAAACGCACTGC...ATGCCCATGACCTGTAATTGTAAAGAAGCTTGGACATCTGCAAATGATATTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR GCA 90 bp | TTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAACTCGAGCCCAGTCGACCAGGAGTTaGTATTATTATATGTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LEQVSFSNSLLQNSRTRAQSTRS*YYYMWF Trigger: AAACCACATATAATAATAGCAACTCCTGGTCGACTG...GGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR GCA 90 bp | GATCTCTGTTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAAAGGATTCTTCAGAGCTaGTCGCTGAAGTTTTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: DLCWSRFHSPILFYRTAERILQS*SLKFLN Trigger: GTTCAAAAACTTCAGCGAGCAGCTCTGAAGAATCCT...TTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAACAGAGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR GCA 90 bp | GAATTAGCTGAGCACATTCTGGACACAATTCTGACCAATTTCAGTCTCATGATCAGGATTCTTCAGAGCTaGTCGCTGAAGTTTTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: ELAEHILDTILTNFSLMIRILQS*SLKFLN Trigger: GTTCAAAAACTTCAGCGAGCAGCTCTGAAGAATCCT...GATCATGAGACTGAAATTGGTCAGAATTGTGTCCAGAATGTGCTCAGCTAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | GAATTAGCTGAGCACATTCTGGACACAATTCTGACCAATTTCAGTCTCATGATCAAGTGTTCTATGCGCTaGAAGAGTTCCACATCATAC | + |
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Preference number: 4 (lower is better) Translates to: ELAEHILDTILTNFSLMIKCSMR*KSSTSY Trigger: GTATGATGTGGAACTCTTCCAGCGCATAGAACACTT...GATCATGAGACTGAAATTGGTCAGAATTGTGTCCAGAATGTGCTCAGCTAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS-3UTR CCA 90 bp | GATCTCTGTTGGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAAAGCAAAGCTGTTCTCTaGGTATTATTACAGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: DLCWSRFHSPILFYRTAESKAVL*VLLQVL Trigger: CAGCACCTGTAATAATACCCAGAGAACAGCTTTGCT...TTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAACAGAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358007.7 |
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| CDS-3UTR GCA 90 bp | TTAAATATCATTTGCAGATGTCCAAGCTTCTTTACAATTACAGGTCATGGGCATCAGTCGACCAGGAGTTaGTATTATTATATGTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LNIICRCPSFFTITGHGHQSTRS*YYYMWF Trigger: AAACCACATATAATAATAGCAACTCCTGGTCGACTG...ATGCCCATGACCTGTAATTGTAAAGAAGCTTGGACATCTGCAAATGATATTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000352940.8 ENST00000358007.7 |
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| CDS CCA 90 bp | ACCAGGTCTTTAAATGTTTTAGTTTCCTCCTCTTCCACAATCGGCTaGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATC | + |
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Preference number: 5 (lower is better) Translates to: TRSLNVLVSSSSTIG*DASVGESCSSGAAI Trigger: GATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGAGGAGGAAACTAAAACATTTAAAGACCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426619.6 |
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| CDS TCA 90 bp | ACCTTGGAATGGGTAGGAATGTCAAAGTTGACAACCACATCTACATaGGGTATGTCCAAACCTCGGCTGGCAACGTCAGTTGCTAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: TLEWVGMSKLTTTST*GMSKPRLATSVARR Trigger: TCTTCTAGCAACTGACGTTGCCAGCCGAGGTTTGGACATACCTCATGTAGATGTGGTTGTCAACTTTGACATTCCTACCCATTCCAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541537.5 |
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| CDS TCA 90 bp | GATGAATCCTTACCTGACTCATTTGTCCATGGAGGGGGATGGCAGTaGAGCCAAGATTTCGCAGTAGCAAAGCTGTTCTCTGGGTATTAT | + |
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Preference number: 5 (lower is better) Translates to: DESLPDSFVHGGGWQ*SQDFAVAKLFSGYY Trigger: ATAATACCCAGAGAACAGCTTTGCTACTGCGAAATCTTGGCTTCACTGCCATCCCCCTCCATGGACAAATGAGTCAGGTAAGGATTCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542123.5 |
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| CDS GCA 90 bp | TGTACAAACCTACTGTTAGGAGGTTTATCTCGCTCACGCCACCAGTaGATGGCTGATGATGATGATGAATCCTTACCTGACTCATTTGTC | + |
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Preference number: 5 (lower is better) Translates to: CTNLLLGGLSRSRHQ*MADDDDESLPDSFV Trigger: GACAAATGAGTCAGGTAAGGATTCATCATCATCATCAGCCATGCACTGGTGGCGTGAGCGAGATAAACCTCCTAACAGTAGGTTTGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542123.5 |
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| CDS CCA 90 bp | TACAAGCTGTCATTCTCAAGAAATGACAGTGACAAGATCAGTATGTaGCGCACCAGCCCCTTCTATGAGCATCTAATAACTCTCCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: YKLSFSRNDSDKISM*RTSPFYEHLITLLG Trigger: GCCAAGGAGAGTTATTAGATGCTCATAGAAGGGGCTGGTGCGCCACATACTGATCTTGTCACTGTCATTTCTTGAGAATGACAGCTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541537.5 |
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| CDS TCA 90 bp | AGACAGGATGCCAATCTGCATTACAGCTCTTACCTAATCAAGAGTTaGCACATTTTCAGATGCTTTGGTGAAAAGAAGAGGGAGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RQDANLHYSSYLIKS*HIFRCFGEKKRERQ Trigger: CTGCCTCTCCCTCTTCTTTTCACCAAAGCATCTGAAAATGTGTCAACTCTTGATTAGGTAAGAGCTGTAATGCAGATTGGCATCCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000542123.5 ENST00000545038.5 |
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| CDS-3UTR CAA 90 bp | AGTGACAGAAGAGCACACCCTACTCATGTCATGAGCAAGGAATCAAAGTCGAAGCCTAGGCGCTTACTCTaGAATTTAGAGGGAATAAAA | + |
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Preference number: 5 (lower is better) Translates to: SDRRAHPTHVMSKESKSKPRRLL*NLEGIK Trigger: TTTTATTCCCTCTAAATTCAAGAGTAAGCGCCTAGG...CTTCGACTTTGATTCCTTGCTCATGACATGAGTAGGGTGTGCTCTTCTGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352940.8 |
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| CDS GCA 90 bp | AATTCCTGGCATGTCTGGCTTATCGGTGATAATATAAGCACGATATaGACTCTAAAGCAAACAGACAGGATGCCAATCTGCATTACAGCT | + |
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Preference number: 5 (lower is better) Translates to: NSWHVWLIGDNISTI*TLKQTDRMPICITA Trigger: AGCTGTAATGCAGATTGGCATCCTGTCTGTTTGCTTTAGAGTGCATATCGTGCTTATATTATCACCGATAAGCCAGACATGCCAGGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542123.5 ENST00000545038.5 |
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| CDS CCA 90 bp | GCCCATAAAATTACAACAATTATGGAAACAGGCATCGGTGCCCTATaGCCTTATTGTACAAACCTACTGTTAGGAGGTTTATCTCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: AHKITTIMETGIGAL*PYCTNLLLGGLSRS Trigger: TGAGCGAGATAAACCTCCTAACAGTAGGTTTGTACAATAAGGCCATAGGGCACCGATGCCTGTTTCCATAATTGTTGTAATTTTATGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542123.5 |
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| CDS CCA 90 bp | AATAAAAAGAACATAGCATGCATAGTTAGGCTGAGAAGTACAATGTaGCTGGAACACAGAAGTGTTAAGGGAGAAAGAGGGAAGAATGAG | + |
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Preference number: 5 (lower is better) Translates to: NKKNIACIVRLRSTM*LEHRSVKGERGKNE Trigger: CTCATTCTTCCCTCTTTCTCCCTTAACACTTCTGTGTTCCAGCCACATTGTACTTCTCAGCCTAACTATGCATGCTATGTTCTTTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392155.2 |
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| CDS TCA 90 bp | ATTACCTCAAGGATGGGGATGGGAAGGAATTATATGATTACATCATaGCCTCAGTATTGTGATTTAATGTGTTGTGAATTCCTGGCATGT | + |
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Preference number: 5 (lower is better) Translates to: ITSRMGMGRNYMITS*PQYCDLMCCEFLAC Trigger: ACATGCCAGGAATTCACAACACATTAAATCACAATACTGAGGTCATGATGTAATCATATAATTCCTTCCCATCCCCATCCTTGAGGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542123.5 ENST00000545038.5 |
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| CDS GCA 72 bp | CAAAGCAAAGGCGCCTGTCTTTCCAGAGCCAGTTTCTaGAAGCCCAATGATATCACGACCTGTAACCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: QSKGACLSRASF*KPNDITTCNPS Trigger: GCTGGGGTTACAGGTCGTGATATCATTGGGCTTGCAGAAACTGGCTCTGGAAAGACAGGCGCCTTTGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392155.2 |
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| CDS TCA 72 bp | TTACCTGACTCATTTGTCCATGGAGGGGGATGGCAGTaGAGCCAAGATTTCGCAGTAGCAAAGCTGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LPDSFVHGGGWQ*SQDFAVAKLFS Trigger: AGAGAACAGCTTTGCTACTGCGAAATCTTGGCTTCACTGCCATCCCCCTCCATGGACAAATGAGTCAGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542123.5 |
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| CDS GCA 72 bp | CTACTGTTAGGAGGTTTATCTCGCTCACGCCACCAGTaGATGGCTGATGATGATGATGAATCCTTACCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLLGGLSRSRHQ*MADDDDESLPD Trigger: GTCAGGTAAGGATTCATCATCATCATCAGCCATGCACTGGTGGCGTGAGCGAGATAAACCTCCTAACAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542123.5 |
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| CDS CAA 72 bp | GCTTGTAAGGCCAAAGGAATAGCTTCAATCTGGATCTaGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCT | + |
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Preference number: 6 (lower is better) Translates to: ACKAKGIASIWI*VGFVHPNWSQA Trigger: AGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGATTGAAGCTATTCCTTTGGCCTTACAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542123.5 ENST00000544400.1 |
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| CDS CAA 72 bp | TGGCTGATGATGATGATGAATCCTTACCTGACTCATTaGTCCATGGAGGGGGATGGCAGTGAAGCCAAGATT | + |
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Preference number: 6 (lower is better) Translates to: WLMMMMNPYLTH*SMEGDGSEAKI Trigger: AATCTTGGCTTCACTGCCATCCCCCTCCATGGACAAATGAGTCAGGTAAGGATTCATCATCATCATCAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542123.5 |
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| CDS CAA 90 bp | GTGATTAGTGTAGTAAATGGTAGTGTCAGGTTCTCAGCCAGTGGCTaGAAAGTTCTGCTCTTTTCTCTACATTGCTCGGCCCTAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VISVVNGSVRFSASG*KVLLFSLHCSALKL Trigger: CAGCTTTAGGGCCGAGCAATGTAGAGAAAAGAGCAGAACTTTCAAGCCACTGGCTGAGAACCTGACACTACCATTTACTACACTAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535722.1 |
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| CDS CAA 90 bp | TACAACCTACCTTGTAAGGCCAAAGGAATAGCTTCAATCTGGATCTaGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAAC | + |
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Preference number: 6 (lower is better) Translates to: YNLPCKAKGIASIWI*VGFVHPNWSQASHN Trigger: GTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGATTGAAGCTATTCCTTTGGCCTTACAAGGTAGGTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544497.1 |
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| CDS CAA 90 bp | ACAATCACAGCTTGTAAGGCCAAAGGAATAGCTTCAATCTGGATCTaGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAAC | + |
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Preference number: 6 (lower is better) Translates to: TITACKAKGIASIWI*VGFVHPNWSQASHN Trigger: GTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGATTGAAGCTATTCCTTTGGCCTTACAAGCTGTGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542123.5 ENST00000544400.1 |
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| CDS CAA 90 bp | AATTACAACAATTATGGAAACAGGCATCGGTGCCCTATGGCCTTATaGTACAAACCTACTGTTAGGAGGTTTATCTCGCTCACGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: NYNNYGNRHRCPMAL*YKPTVRRFISLTPP Trigger: TGGTGGCGTGAGCGAGATAAACCTCCTAACAGTAGGTTTGTACAATAAGGCCATAGGGCACCGATGCCTGTTTCCATAATTGTTGTAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542123.5 |
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| CDS CAA 72 bp | TCGCTTTTCAATTATCCAGACCTCCAGCTGCCAGCTTaGCATTCCTTAACCAGCATTATCATCTCTGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: SLFNYPDLQLPA*HSLTSIIISVN Trigger: GTTCACAGAGATGATAATGCTGGTTAAGGAATGCAAAGCTGGCAGCTGGAGGTCTGGATAATTGAAAAGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542123.5 ENST00000545038.5 |
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| CDS CAA 72 bp | AATTATGGAAACAGGCATCGGTGCCCTATGGCCTTATaGTACAAACCTACTGTTAGGAGGTTTATCTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: NYGNRHRCPMAL*YKPTVRRFISL Trigger: GAGCGAGATAAACCTCCTAACAGTAGGTTTGTACAATAAGGCCATAGGGCACCGATGCCTGTTTCCATAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542123.5 |
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| CDS CAA 72 bp | GTCAATCAGTCGACCAGGAGTTGCTACCAAGAAAGGTaGAGGAGAAACAGTGACATTTCAGAACAGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: VNQSTRSCYQER*RRNSDISEQDK Trigger: TTTGTCCTGTTCTGAAATGTCACTGTTTCTCCTCAACCTTTCTTGGTAGCAACTCCTGGTCGACTGATTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544032.5 |
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| CDS GCA 72 bp | CATGTCTGGCTTATCGGTGATAATATAAGCACGATATaGACTCTAAAGCAAACAGACAGGATGCCAATCTGC | + |
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Preference number: 6 (lower is better) Translates to: HVWLIGDNISTI*TLKQTDRMPIC Trigger: GCAGATTGGCATCCTGTCTGTTTGCTTTAGAGTGCATATCGTGCTTATATTATCACCGATAAGCCAGACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542123.5 ENST00000545038.5 |
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| CDS CCA 72 bp | ATTACAACAATTATGGAAACAGGCATCGGTGCCCTATaGCCTTATTGTACAAACCTACTGTTAGGAGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: ITTIMETGIGAL*PYCTNLLLGGL Trigger: TAAACCTCCTAACAGTAGGTTTGTACAATAAGGCCATAGGGCACCGATGCCTGTTTCCATAATTGTTGTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542123.5 |
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| CDS TCA 72 bp | AGGATGGGGATGGGAAGGAATTATATGATTACATCATaGCCTCAGTATTGTGATTTAATGTGTTGTGAATTC | + |
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Preference number: 6 (lower is better) Translates to: RMGMGRNYMITS*PQYCDLMCCEF Trigger: GAATTCACAACACATTAAATCACAATACTGAGGTCATGATGTAATCATATAATTCCTTCCCATCCCCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542123.5 ENST00000545038.5 |
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