RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDX39A (Homo sapiens)

Ensembl gene IDs: ENSG00000123136

Ensembl transcript IDs: ENST00000242776.9, ENST00000324340.13, ENST00000454233.6, ENST00000586558.5, ENST00000586993.5, ENST00000587730.5, ENST00000588542.5, ENST00000588692.5, ENST00000589318.5, ENST00000589675.5, ENST00000590239.5, ENST00000590260.5, ENST00000590556.1, ENST00000590696.1, ENST00000592391.5, ENST00000592632.5, ENST00000592927.5, ENST00000593008.1, ENST00000593026.1

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGAGTGAGCCGCGGGAGTGGCCAGTCCTGGTGCCTGAGGGGCTaGGGGGTGGCCAGCGAGCGCAGGCGCGGGAGGAGCTGCAATCCA +
Preference number: 1 (lower is better)
Translates to: GRVSRGSGQSWCLRG*GVASERRRGRSCNP
Trigger: TGGATTGCAGCTCCTCCCGCGCCTGCGCTCGCTGGCCACCCCCCAGCCCCTCAGGCACCAGGACTGGCCACTCCCGCGGCTCACTCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592927.5
3UTR TCA 90 bp CTGCACATCCCGCCGCATGTCTGTGCCAGGGAGCCAGTGGCACCGTaGCGAGGGCAGAGTGAGCCGCGGGAGTGGCCAGTCCTGGTGCCT +
Preference number: 1 (lower is better)
Translates to: LHIPPHVCAREPVAP*RGQSEPREWPVLVP
Trigger: AGGCACCAGGACTGGCCACTCCCGCGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCTCCCTGGCACAGACATGCGGCGGGATGTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
3UTR GCA 90 bp CTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTGAAGCTGCATaGGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTGGTTACCG +
Preference number: 1 (lower is better)
Translates to: LASQQWRLERGGEAA*GRLRVGGSGTWWLP
Trigger: CGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR TCA 90 bp CATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTaGAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTG +
Preference number: 1 (lower is better)
Translates to: HTISSFSTVAPGKGR*SCMRAAPGGRLWHV
Trigger: CACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
3UTR CCA 90 bp GGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTaGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTC +
Preference number: 1 (lower is better)
Translates to: GEAACGRLRVGGSGT*WLPALLDVCGDVDF
Trigger: GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR TCA 90 bp GGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTCCTGGAAAGGGGAGGTaGAGCTGCATGCGGGCGGCT +
Preference number: 2 (lower is better)
Translates to: GEVKLHAGGSGWAALARGPGKGR*SCMRAA
Trigger: AGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGG...ACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR GCA 90 bp GGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTTGGCTAGGCCTTTGGTaGCAAAGCGACCCGCCCGGG +
Preference number: 2 (lower is better)
Translates to: GEVKLHAGGSGWAALARGWLGLW*QSDPPG
Trigger: CCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCA...ACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR TCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGCCTGGAAAGGGGAGGTaGAGCTGCATGCGGGCGGCT +
Preference number: 2 (lower is better)
Translates to: GWAALARGGYRLCSMYVEPGKGR*SCMRAA
Trigger: AGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGG...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR GCA 90 bp TGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGGGAGGTGAAGCTGCATaGGGGCGGCTCCGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: WAALARGGYRLCSMYVEMGGEAA*GRLRVG
Trigger: GCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCC...CATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR CCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGGGCGGCTCTGGCACGTaGTGGTTACCGGCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: GWAALARGGYRLCSMYVEGGSGT*WLPALL
Trigger: GAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR CCA 90 bp GGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGACAGGCGCTCCTCCTaGGCCATGCCCCGGTGGATG +
Preference number: 2 (lower is better)
Translates to: GGSGTWWLPALLDVCGDVDRRSS*AMPRWM
Trigger: CATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTC...GACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588692.5
3UTR-3UTR CCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGCCCGGCCAAACAGATTaGTGGCCACCAGGATCCGCC +
Preference number: 2 (lower is better)
Translates to: GWAALARGGYRLCSMYVEPGQTD*WPPGSA
Trigger: GGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGG...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
3UTR-3UTR TCA 90 bp TTCTCGTGTGGTGTCAGGCGGAAGATCTCCTGCACATCCCGCCGCATGTCTGTGGAGCCAGTGGCACCGTaGCGAGGGCAGAGTGAGCCG +
Preference number: 2 (lower is better)
Translates to: FSCGVRRKISCTSRRMSVEPVAP*RGQSEP
Trigger: CGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCTC...CACAGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
3UTR-3UTR GCA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATGGAGGTGAAGCTGCATaGGGGCGGCTCCGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDGGEAA*GRLRVG
Trigger: GCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCC...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR CCA 90 bp CGGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGACCACAAACACCTCCATaGGCTGTGTGGGAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: RVGGSGTWWLPALLDVCGPQTPP*AVWEGR
Trigger: CCTCCCTTCCCACACAGCCCATGGAGGTGTTTGTGG...TCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
3UTR-3UTR GCA 90 bp CGGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAAGGGCCATGCAGCGCTaGACTGACTTGACGAAGATT +
Preference number: 2 (lower is better)
Translates to: RVGGSGTWWLPALLDVCGRAMQR*TDLTKI
Trigger: AATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCT...TCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
3UTR-3UTR CCA 90 bp TGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGCTCAACAGTGGCGCCTaGAAAGGGGAGGTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: WAALARGGYRLCSMYVEMLNSGA*KGEVKL
Trigger: CAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAG...CATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR TCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGAGCGCTGCACTGACTTaGCGAAGATTATCACCTGGT +
Preference number: 2 (lower is better)
Translates to: GWAALARGGYRLCSMYVESAALT*RRLSPG
Trigger: ACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCT...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
3UTR-3UTR GCA 90 bp AGCTGGGCCAGGGCCATGCAGCGCTGCACTGACTTGACGAAGATTATCACCTGGAGGCGGAAGATCTCCTaGACATCCCGCCGCATGTCT +
Preference number: 2 (lower is better)
Translates to: SWARAMQRCTDLTKIITWRRKIS*TSRRMS
Trigger: AGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCT...CCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
3UTR-3UTR CCA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATCTAGCTTCTCAACAGTaGCGCCTGGAAAGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDLASQQ*RLERGG
Trigger: ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAG...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR CCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGTCTGCTCGATGTATGTaGAGATGTCGATTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: GWAALARGGYRLCSMYVESARCM*RCRFPL
Trigger: CAGAGGAAATCGACATCTCCACATACATCGAGCAGA...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR CCA 90 bp GGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCACTTCAAACCGGTCCTaGACGTCATTGAGGATTTTG +
Preference number: 2 (lower is better)
Translates to: GGSGTWWLPALLDVCGDVTSNRS*TSLRIL
Trigger: CAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGT...GACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR-3UTR GCA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCCTCTGGAAGTTCTaGCACATTAACTTCAAACCG +
Preference number: 2 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDFLWKF*HINFKP
Trigger: CGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAA...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR CCA 72 bp CGCAGGCGCGGGAGGAGCTGCAATCCACTTACACGCTaGCGCGGAGCAGCCGTGCCCGTGCGCCTCGAGCCA +
Preference number: 3 (lower is better)
Translates to: RRRGRSCNPLTR*RGAAVPVRLEP
Trigger: TGGCTCGAGGCGCACGGGCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCCGCGCCTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
3UTR TCA 72 bp CCGCCGCATGTCTGTGCCAGGGAGCCAGTGGCACCGTaGCGAGGGCAGAGTGAGCCGCGGGAGTGGCCAGTC +
Preference number: 3 (lower is better)
Translates to: PPHVCAREPVAP*RGQSEPREWPV
Trigger: GACTGGCCACTCCCGCGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCTCCCTGGCACAGACATGCGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
3UTR-3UTR CAA 90 bp GGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTGTGATGGCTAGGCCTTaGGTGCCAAAGCGACCCGCC +
Preference number: 3 (lower is better)
Translates to: GEVKLHAGGSGWAALARGVMARP*VPKRPA
Trigger: GGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCAC...ACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR CCA 72 bp TGCACATCCCGCCGCATGTCTGTGCCAGGGAGCCAGTaGCACCGTGACGAGGGCAGAGTGAGCCGCGGGAGT +
Preference number: 3 (lower is better)
Translates to: CTSRRMSVPGSQ*HRDEGRVSRGS
Trigger: ACTCCCGCGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCTCCCTGGCACAGACATGCGGCGGGATGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
3UTR TCA 72 bp TCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTaGAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: SSFSTVAPGKGR*SCMRAAPGGRL
Trigger: GAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
3UTR CCA 72 bp TGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTaGTTACCGGCTCTGCTCGATGTATGTGGAGATGTC +
Preference number: 3 (lower is better)
Translates to: CGRLRVGGSGTW*LPALLDVCGDV
Trigger: GACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
3UTR CCA 72 bp GCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTaGTGGTTACCGGCTCTGCTCGATGTATGTGGAGAT +
Preference number: 3 (lower is better)
Translates to: ACGRLRVGGSGT*WLPALLDVCGD
Trigger: ATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp GGCCAGCGAGCGCAGGCGCGGGAGGAGCTGCAATCCACTTACACGCTGGCGCGGTGGTGCCTGAGGGGCTaGGGGGTGGCCAGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: GQRAQAREELQSTYTLARWCLRG*GVASER
Trigger: GCGCTCGCTGGCCACCCCCCAGCCCCTCAGGCACCA...CCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCCGCGCCTGCGCTCGCTGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR GCA 90 bp AGCCAGTGGCACCGTGACGAGGGCAGAGTGAGCCGCGGGAGTGGCCAGTCCTGGGCACGAGCGCCAGGATaGGGCCCGGGGTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: SQWHRDEGRVSRGSGQSWARAPG*GPGSPP
Trigger: TGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGC...CCAGGACTGGCCACTCCCGCGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR TCA 90 bp AGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGCCTGGAAAGGGGAGGTaGAGCTGCATGCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: RGGEAACGRLRVGGSGTWPGKGR*SCMRAA
Trigger: AGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGG...CCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp TGGAAAGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACCGGGTGGGCGGCTCTaGCACGTGGTGGTTACCGGC +
Preference number: 4 (lower is better)
Translates to: WKGEVKLHAGGSGWAALAPGGRL*HVVVTG
Trigger: GCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGG...TGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR TCA 90 bp AGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGGCTGGTGTGCTCTCTTaGGGAGCCTGGGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RGGEAACGRLRVGGSGTWAGVLS*GAWGSS
Trigger: GGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGC...CCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR TCA 90 bp GCAGGCGCGGGAGGAGCTGCAATCCACTTACACGCTGGCGCGGAGCAGCCGTGCGAGCCAGTGGCACCGTaGCGAGGGCAGAGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: AGAGGAAIHLHAGAEQPCEPVAP*RGQSEP
Trigger: CGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCTC...GCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCCGCGCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR GCA 90 bp GGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTGGCACAGGACGTCCATaGCCAGGATGGCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GEVKLHAGGSGWAALARGGTGRP*PGWPGE
Trigger: TTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCC...ACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp GGGAGGAGCTGCAATCCACTTACACGCTGGCGCGGAGCAGCCGTGCCCGTGCGCCCCGCCGCATGTCTGTaGCAGGGAGCCAGTGGCACC +
Preference number: 4 (lower is better)
Translates to: GRSCNPLTRWRGAAVPVRPAACL*QGASGT
Trigger: GGTGCCACTGGCTCCCTGGCACAGACATGCGGCGGG...GCGCACGGGCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR CCA 90 bp AGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGGCCAGCTCCCTCGTGTaGCACATGACCAGGACCGTC +
Preference number: 4 (lower is better)
Translates to: RGGEAACGRLRVGGSGTWASSLV*HMTRTV
Trigger: GACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGC...CCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp GGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTCCATGCCCCGGTGGATaGCGATGGCCGGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GEVKLHAGGSGWAALARGPCPGG*RWPGSS
Trigger: AGAACTTCCCGGCCATCGCCATCCACCGGGGCATGG...ACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000588692.5
CDS-3UTR CCA 90 bp TGGAAAGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCATGGGCCATGCCCCGGTaGATGGCGATGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: WKGEVKLHAGGSGWAALAWAMPR*MAMAGK
Trigger: CTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCA...TGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000588692.5
CDS-3UTR CCA 90 bp TGGAAAGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCAGACAGGCGCTCCTCCTaGGCCATGCCCCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: WKGEVKLHAGGSGWAALADRRSS*AMPRWM
Trigger: CATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTC...TGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000588692.5
CDS-3UTR CCA 90 bp GGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTCCCGGCCAAACAGATTaGTGGCCACCAGGATCCGCC +
Preference number: 4 (lower is better)
Translates to: GEVKLHAGGSGWAALARGPGQTD*WPPGSA
Trigger: GGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGG...ACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp GGCCAGCGAGCGCAGGCGCGGGAGGAGCTGCAATCCACTTACACGCTGGCGCGGGTGCCAGGGAGCCAGTaGCACCGTGACGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GQRAQAREELQSTYTLARVPGSQ*HRDEGR
Trigger: TCTGCCCTCGTCACGGTGCCACTGGCTCCCTGGCAC...CCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCCGCGCCTGCGCTCGCTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR GCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGGCACGAGCGCCAGGATaGGGCCCGGGGTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: GWAALARGGYRLCSMYVEARAPG*GPGSPP
Trigger: TGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGC...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp CCTGCACATCCCGCCGCATGTCTGTGCCAGGGAGCCAGTGGCACCGTGACGAGGGAGCAGCCGTGCCCGTaGGCCTCGAGCCACGCTTCA +
Preference number: 4 (lower is better)
Translates to: PAHPAACLCQGASGTVTREQPCP*ASSHAS
Trigger: TGAAGCGTGGCTCGAGGCGCACGGGCACGGCTGCTC...CCTCGTCACGGTGCCACTGGCTCCCTGGCACAGACATGCGGCGGGATGTGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR CCA 90 bp GACGAGGGCAGAGTGAGCCGCGGGAGTGGCCAGTCCTGGTGCCTGAGGGGCTGGAATCCACTTACACGCTaGCGCGGAGCAGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: DEGRVSRGSGQSWCLRGWNPLTR*RGAAVP
Trigger: GGGCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATT...CCAGCCCCTCAGGCACCAGGACTGGCCACTCCCGCGGCTCACTCTGCCCTCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR CCA 90 bp GCGAGCGCAGGCGCGGGAGGAGCTGCAATCCACTTACACGCTGGCGCGGAGCAGAGTGAGCCGCGGGAGTaGCCAGTCCTGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ASAGAGGAAIHLHAGAEQSEPRE*PVLVPE
Trigger: CTCAGGCACCAGGACTGGCCACTCCCGCGGCTCACT...CTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCCGCGCCTGCGCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR GCA 90 bp TGGAAAGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCAGGCACAGGACGTCCATaGCCAGGATGGCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: WKGEVKLHAGGSGWAALAGTGRP*PGWPGE
Trigger: TTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCC...TGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGGGAGGTGAAGCTGCATaGGGGCGGCTCCGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GWAALARGGYRLCSMYVEGGEAA*GRLRVG
Trigger: GCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCC...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp AGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGCAATCTGCTGTAGGGTaGCCAGCACGAAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: RGGEAACGRLRVGGSGTWQSAVG*PARRPL
Trigger: CAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTG...CCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp GCAGGCGCGGGAGGAGCTGCAATCCACTTACACGCTGGCGCGGAGCAGCCGTGCGCCAGCTCCCTCGTGTaGCACATGACCAGGACCGTC +
Preference number: 4 (lower is better)
Translates to: AGAGGAAIHLHAGAEQPCASSLV*HMTRTV
Trigger: GACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGC...GCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCCGCGCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR CCA 90 bp AGCCAGTGGCACCGTGACGAGGGCAGAGTGAGCCGCGGGAGTGGCCAGTCCTGGCCATGCCCCGGTGGATaGCGATGGCCGGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SQWHRDEGRVSRGSGQSWPCPGG*RWPGSS
Trigger: AGAACTTCCCGGCCATCGCCATCCACCGGGGCATGG...CCAGGACTGGCCACTCCCGCGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR GCA 90 bp AGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTGGGCGACTCCTTTGTaGGACACTTCCCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: RGGEAACGRLRVGGSGTWWATPL*DTSQRT
Trigger: TGTCCTCTGGGAAGTGTCGCACAAAGGAGTCGCCCA...CCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR CCA 90 bp AGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGCTAGCTTCTCAACAGTaGCGCCTGGAAAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RGGEAACGRLRVGGSGTWLASQQ*RLERGG
Trigger: ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAG...CCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR TCA 90 bp TGTGGTGTCAGGCGGAAGATCTCCTGCACATCCCGCCGCATGTCTGTGCCAGGGGTGACGAGGGCAGAGTaGGCCGCGGGAGTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CGVRRKISCTSRRMSVPGVTRAE*AAGVAS
Trigger: ACTGGCCACTCCCGCGGCTCACTCTGCCCTCGTCAC...CCCTGGCACAGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR GCA 90 bp AGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTGGGGAATGCACTCATaGTGGACCTCAGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: RGGEAACGRLRVGGSGTWWGMHS*WTSEGC
Trigger: GCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCA...CCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp AGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGAGGGCCATGCAGCGCTaGACTGACTTGACGAAGATT +
Preference number: 4 (lower is better)
Translates to: RGGEAACGRLRVGGSGTWRAMQR*TDLTKI
Trigger: AATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCT...CCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000588692.5
CDS-3UTR GCA 90 bp CCTGCACATCCCGCCGCATGTCTGTGCCAGGGAGCCAGTGGCACCGTGACGAGGAGGCGCGGGAGGAGCTaGAATCCACTTACACGCTGG +
Preference number: 4 (lower is better)
Translates to: PAHPAACLCQGASGTVTRRRGRS*NPLTRW
Trigger: CCAGCGTGTAAGTGGATTGCAGCTCCTCCCGCGCCT...CCTCGTCACGGTGCCACTGGCTCCCTGGCACAGACATGCGGCGGGATGTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR CCA 90 bp GGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTTTTCTTAGGGGGAGCTaGTGTGCTCTCTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GEVKLHAGGSGWAALARGFLRGS*CALLRS
Trigger: GCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAA...ACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp TGGAAAGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACCACAAACACCTCCATaGGCTGTGTGGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: WKGEVKLHAGGSGWAALAPQTPP*AVWEGR
Trigger: CCTCCCTTCCCACACAGCCCATGGAGGTGTTTGTGG...TGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR GCA 90 bp AGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTCCCAGAGGACATCCTaGATGAACTTCCTGCACACA +
Preference number: 4 (lower is better)
Translates to: RGGEAACGRLRVGGSGTWSQRTS*MNFLHT
Trigger: TGTGTGCAGGAAGTTCATGCAGGATGTCCTCTGGGA...CCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR GCA 90 bp CCTGCACATCCCGCCGCATGTCTGTGCCAGGGAGCCAGTGGCACCGTGACGAGGAGGCGGAAGATCTCCTaGACATCCCGCCGCATGTCT +
Preference number: 4 (lower is better)
Translates to: PAHPAACLCQGASGTVTRRRKIS*TSRRMS
Trigger: AGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCT...CCTCGTCACGGTGCCACTGGCTCCCTGGCACAGACATGCGGCGGGATGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR CCA 90 bp GGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTGGAATGCACTCATGCTaGACCTCAGAAGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: GEVKLHAGGSGWAALARGGMHSC*TSEGCS
Trigger: TGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCC...ACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATCCCGGACTTGGCCTaGCACAGGACGTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: GWAALARGGYRLCSMYVEIPDLA*HRTSMP
Trigger: GGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGAT...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp GGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCTGGGCCATGCCCCGGTaGATGGCGATGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GGSGTWWLPALLDVCGDVWAMPR*MAMAGK
Trigger: CTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCA...GACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR CCA 90 bp CGGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGACCCGGCCAAACAGATTaGTGGCCACCAGGATCCGCC +
Preference number: 4 (lower is better)
Translates to: RVGGSGTWWLPALLDVCGPGQTD*WPPGSA
Trigger: GGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGG...TCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp AGCTGGGCCAGGGCCATGCAGCGCTGCACTGACTTGACGAAGATTATCACCTGGCCGGGTGGGCGGCTCTaGCACGTGGTGGTTACCGGC +
Preference number: 4 (lower is better)
Translates to: SWARAMQRCTDLTKIITWPGGRL*HVVVTG
Trigger: GCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGG...CCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR CCA 90 bp TGGAAAGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACTAGCTTCTCAACAGTaGCGCCTGGAAAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: WKGEVKLHAGGSGWAALALASQQ*RLERGG
Trigger: ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAG...TGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp GGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTGATAGCGTGACAGGCTaGTTAAACTCCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: GEVKLHAGGSGWAALARGDSVTG*LNSSTS
Trigger: GGATGTGCTGGAGTTTAACCAGCCTGTCACGCTATC...ACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324340.13
CDS-3UTR TCA 90 bp GGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCCCTGGAAAGGGGAGGTaGAGCTGCATGCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GGSGTWWLPALLDVCGDVPGKGR*SCMRAA
Trigger: AGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGG...GACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGAGGCGGAAGATCTCCTaGACATCCCGCCGCATGTCC +
Preference number: 4 (lower is better)
Translates to: GWAALARGGYRLCSMYVERRKIS*TSRRMS
Trigger: GGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCT...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp GTGGCCAGCGAGCGCAGGCGCGGGAGGAGCTGCAATCCACTTACACGCTGGCGCAGGGCCATGCAGCGCTaGACTGACTTGACGAAGATT +
Preference number: 4 (lower is better)
Translates to: VASERRRGRSCNPLTRWRRAMQR*TDLTKI
Trigger: AATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCT...GCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCCGCGCCTGCGCTCGCTGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR GCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGTCTGGGCATCTCGCCTaGCCAGAACCTTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GWAALARGGYRLCSMYVESGHLA*PEPSSG
Trigger: CCCACTGGAAGGTTCTGGGCAGGCGAGATGCCCAGA...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR CCA 90 bp ATGTCTGTGCCAGGGAGCCAGTGGCACCGTGACGAGGGCAGAGTGAGCCGCGGGGCACTGCTTCTCGTGTaGTGTCAGGCGGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: MSVPGSQWHRDEGRVSRGALLLV*CQAEDL
Trigger: GAGATCTTCCGCCTGACACCACACGAGAAGCAGTGC...CCCGCGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCTCCCTGGCACAGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR CCA 90 bp TTCTCGTGTGGTGTCAGGCGGAAGATCTCCTGCACATCCCGCCGCATGTCTGTGTGCTCCACGAGGAGCTaGGCCAGGGCCATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: FSCGVRRKISCTSRRMSVCSTRS*ARAMQR
Trigger: GCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCA...CACAGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR CCA 90 bp TTCTCGTGTGGTGTCAGGCGGAAGATCTCCTGCACATCCCGCCGCATGTCTGTGTGGGCCATGCCCCGGTaGATGGCGATGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: FSCGVRRKISCTSRRMSVWAMPR*MAMAGK
Trigger: CTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCA...CACAGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR TCA 90 bp CGGGAGGAGCTGCAATCCACTTACACGCTGGCGCGGAGCAGCCGTGCCCGTGCGAGCGCTGCACTGACTTaGCGAAGATTATCACCTGGT +
Preference number: 4 (lower is better)
Translates to: REELQSTYTLARSSRARASAALT*RRLSPG
Trigger: ACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCT...CGCACGGGCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR TCA 90 bp GGGAGGAGCTGCAATCCACTTACACGCTGGCGCGGAGCAGCCGTGCCCGTGCGCCATGCAGCGCTGCACTaGCTTGACGAAGATTATCAC +
Preference number: 4 (lower is better)
Translates to: GRSCNPLTRWRGAAVPVRHAALH*LDEDYH
Trigger: GTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATG...GCGCACGGGCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR CCA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTGCTCCACGAGGAGCTaGGCCAGGGCCATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDCSTRS*ARAMQR
Trigger: GCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCA...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR CCA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGCTCAACAGTGGCGCCTaGAAAGGGGAGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GWAALARGGYRLCSMYVELNSGA*KGEVKL
Trigger: CAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAG...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp CGGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGATTGACAGGCTCAATCTaGTGTAGGGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: RVGGSGTWWLPALLDVCGLTGSI*CRVAST
Trigger: CGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAA...TCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp GGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCAGGCGGAAGATCTCCTaGACATCCCGCCGCATGTCC +
Preference number: 4 (lower is better)
Translates to: GGSGTWWLPALLDVCGDVRRKIS*TSRRMS
Trigger: GGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCT...GACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp CCTGCACATCCCGCCGCATGTCTGTGCCAGGGAGCCAGTGGCACCGTGACGAGGACCTCCATGGGATCCTaGATGAACTTCCTGCACACA +
Preference number: 4 (lower is better)
Translates to: PAHPAACLCQGASGTVTRTSMGS*MNFLHT
Trigger: TGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGT...CCTCGTCACGGTGCCACTGGCTCCCTGGCACAGACATGCGGCGGGATGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR GCA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTGGCTAGGCCTTTGGTaGCAAAGCGACCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDWLGLW*QSDPPG
Trigger: CCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCA...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp GGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACGTGGTACGAAGATTATCACCTaGTTAAACTCCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: GEVKLHAGGSGWAALARGTKIIT*LNSSTS
Trigger: GGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGT...ACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000588692.5
CDS-3UTR CCA 90 bp TGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGGGCTCTGGCACGTGGTaGTTACCGGCTCTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: WAALARGGYRLCSMYVEMGSGTW*LPALLD
Trigger: ATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC...CATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp AGCTGGGCCAGGGCCATGCAGCGCTGCACTGACTTGACGAAGATTATCACCTGGGGCAGGGATCACCTCTaGGCATCTCGCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWARAMQRCTDLTKIITWGRDHL*ASRLPR
Trigger: TCTGGGCAGGCGAGATGCCCAGAGGTGATCCCTGCC...CCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR GCA 90 bp GGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCCGCCGCATGTCCAGCTaGTCCAGCATCTTGTCACAC +
Preference number: 4 (lower is better)
Translates to: GGSGTWWLPALLDVCGDVRRMSS*SSILSH
Trigger: GTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCG...GACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp CGGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGATTTCTTAGGGGGAGCTaGTGTGCTCTCTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RVGGSGTWWLPALLDVCGFLRGS*CALLRS
Trigger: GCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAA...TCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp TGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGCAATCTGCTGTAGGGTaGCCAGCACGAAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: WAALARGGYRLCSMYVEMQSAVG*PARRPL
Trigger: CAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTG...CATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp GACGAGGGCAGAGTGAGCCGCGGGAGTGGCCAGTCCTGGTGCCTGAGGGGCTGGACGAAGATTATCACCTaGTTAAACTCCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: DEGRVSRGSGQSWCLRGWTKIIT*LNSSTS
Trigger: GGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGT...CCAGCCCCTCAGGCACCAGGACTGGCCACTCCCGCGGCTCACTCTGCCCTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR CCA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATCCATGCCCCGGTGGATaGCGATGGCCGGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDPCPGG*RWPGSS
Trigger: AGAACTTCCCGGCCATCGCCATCCACCGGGGCATGG...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR TCA 90 bp CGGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAAGCGCTGCACTGACTTaGCGAAGATTATCACCTGGT +
Preference number: 4 (lower is better)
Translates to: RVGGSGTWWLPALLDVCGSAALT*RRLSPG
Trigger: ACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCT...TCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR GCA 90 bp TTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTGCACGAGCGCCAGGATaGGGCCCGGGGTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: FILIQSLASQQWRLERGGARAPG*GPGSPP
Trigger: TGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGC...ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp AGCTGGGCCAGGGCCATGCAGCGCTGCACTGACTTGACGAAGATTATCACCTGGGCACTGCTTCTCGTGTaGTGTCAGGCGGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: SWARAMQRCTDLTKIITWALLLV*CQAEDL
Trigger: GAGATCTTCCGCCTGACACCACACGAGAAGCAGTGC...CCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588692.5
ENST00000592927.5
CDS-3UTR TCA 90 bp TGTGGTGTCAGGCGGAAGATCTCCTGCACATCCCGCCGCATGTCTGTGCCAGGGTCACATTCTTTAGGCTaGAGCTCCTATTCCGCACGA +
Preference number: 4 (lower is better)
Translates to: CGVRRKISCTSRRMSVPGSHSLG*SSYSAR
Trigger: TCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGA...CCCTGGCACAGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS-3UTR GCA 90 bp AGCTGGGCCAGGGCCATGCAGCGCTGCACTGACTTGACGAAGATTATCACCTGGTGGACCTCAGAAGGATaGTCAAAGCCACAGTCCACG +
Preference number: 4 (lower is better)
Translates to: SWARAMQRCTDLTKIITWWTSEG*SKPQST
Trigger: CGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCA...CCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR GCA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTGACAGGCTCAATCTaGTGTAGGGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDLTGSI*CRVAST
Trigger: CGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAA...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp TGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGGGAATGCACTCATGCTaGACCTCAGAAGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: WAALARGGYRLCSMYVEMGMHSC*TSEGCS
Trigger: TGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCC...CATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp GTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGGACAGGCGCTCCTCCTaGGCCATGCCCCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: VYSHTISSFSTVAPGKGRDRRSS*AMPRWM
Trigger: CATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTC...CCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242776.9
CDS-3UTR CCA 90 bp CGGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAACTTCAAACCGGTCCTaGACGTCATTGAGGATTTTG +
Preference number: 4 (lower is better)
Translates to: RVGGSGTWWLPALLDVCGTSNRS*TSLRIL
Trigger: CAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGT...TCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp CGGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGATCTGCTCGATGTATGTaGAGATGTCGATTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RVGGSGTWWLPALLDVCGSARCM*RCRFPL
Trigger: CAGAGGAAATCGACATCTCCACATACATCGAGCAGA...TCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCGGCTCTGGCACGTGGTaGTTACCGGCTCTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFGSGTW*LPALLD
Trigger: ATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR TCA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATAGAACACAGACACCTTaGCGCTGGGCATGTACTTGG +
Preference number: 4 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDRTQTP*RWACTW
Trigger: CCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCT...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCCGCCGCATGTCCAGCTaGTCCAGCATCTTGTCACAC +
Preference number: 4 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFRRMSS*SSILSH
Trigger: GTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCG...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATAGGGCCATGCAGCGCTaGACTGACTTGACGAAGATT +
Preference number: 4 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDRAMQR*TDLTKI
Trigger: AATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCT...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR GCA 90 bp GTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTGGCTAGGCCTTTGGTaGCAAAGCGACCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: VYSHTISSFSTVAPGKGRWLGLW*QSDPPG
Trigger: CCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCA...CCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGTGCTCCACGAGGAGCTaGGCCAGGGCCATGCAGCGC +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGCSTRS*ARAMQR
Trigger: GCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCA...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242776.9
CDS-3UTR CCA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCCCCAGAACCTTCCAGTaGGCGACTCCTTTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFPRTFQ*ATPLCD
Trigger: GTCGCACAAAGGAGTCGCCCACTGGAAGGTTCTGGG...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR TCA 90 bp GTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGGCTGGTGTGCTCTCTTaGGGAGCCTGGGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VYSHTISSFSTVAPGKGRAGVLS*GAWGSS
Trigger: GGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGC...CCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR TCA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATCATGCAGCGCTGCACTaGCTTGACGAAGATTATCAC +
Preference number: 4 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDHAALH*LDEDYH
Trigger: GTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATG...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR GCA 90 bp GTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGGGCACAGGACGTCCATaGCCAGGATGGCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VYSHTISSFSTVAPGKGRGTGRP*PGWPGE
Trigger: TTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCC...CCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp TTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTTGGCTAGGCCTTTGGTaGCAAAGCGACCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: FILIQSLASQQWRLERGGWLGLW*QSDPPG
Trigger: CCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCA...ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp AACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTGAAGCTGCATaGGGGCGGCTCCGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: NKFILIQSLASQQWRLERGGEAA*GRLRVG
Trigger: GCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCC...CCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGCCACAGTCCACGATaGCCCGCAGGAGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGSHSPR*PAGAPA
Trigger: AGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCT...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp TTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTAGCCACAGTCCACGATaGCCCGCAGGAGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: FILIQSLASQQWRLERGGSHSPR*PAGAPA
Trigger: AGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCT...ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp TTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTGGCGGCTCTGGCACGTaGTGGTTACCGGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: FILIQSLASQQWRLERGGGGSGT*WLPALL
Trigger: GAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC...ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCCTAGCTTCTCAACAGTaGCGCCTGGAAAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFLASQQ*RLERGG
Trigger: ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAG...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR TCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGGCTGGTGTGCTCTCTTaGGGAGCCTGGGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGAGVLS*GAWGSS
Trigger: GGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGC...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp AATAACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAGCACGAGCGCCAGGATaGGGCCCGGGGTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: NNKFILIQSLASQQWRLEARAPG*GPGSPP
Trigger: TGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGC...TTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp GTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGAGGCGGAAGATCTCCTaGACATCCCGCCGCATGTCC +
Preference number: 4 (lower is better)
Translates to: VYSHTISSFSTVAPGKGRRRKIS*TSRRMS
Trigger: GGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCT...CCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCTTTCTTAGGGGGAGCTaGTGTGCTCTCTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFFLRGS*CALLRS
Trigger: GCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAA...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGGCCAGCTCCCTCGTGTaGCACATGACCAGGACCGTC +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGASSLV*HMTRTV
Trigger: GACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGC...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGCCCGGCCAAACAGATTaGTGGCCACCAGGATCCGCC +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGPGQTD*WPPGSA
Trigger: GGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGG...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCACCTCCATGGGATCCTaGATGAACTTCCTGCACACA +
Preference number: 4 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFTSMGS*MNFLHT
Trigger: TGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGT...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324340.13
CDS-3UTR GCA 90 bp AATAACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAGGAGGTGAAGCTGCATaGGGGCGGCTCCGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: NNKFILIQSLASQQWRLEGGEAA*GRLRVG
Trigger: GCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCC...TTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp AATAACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAACCGGGTGGGCGGCTCTaGCACGTGGTGGTTACCGGC +
Preference number: 4 (lower is better)
Translates to: NNKFILIQSLASQQWRLEPGGRL*HVVVTG
Trigger: GCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGG...TTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR TCA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCTCACATTCTTTAGGCTaGAGCTCCTATTCCGCACGA +
Preference number: 4 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFSHSLG*SSYSAR
Trigger: TCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGA...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR GCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGCGCCGCATGTCCAGCTaGTCCAGCATCTTGTCACAC +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGRRMSS*SSILSH
Trigger: GTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCG...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp TTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTCTCAACAGTGGCGCCTaGAAAGGGGAGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FILIQSLASQQWRLERGGLNSGA*KGEVKL
Trigger: CAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAG...ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGTTGACAGGCTCAATCTaGTGTAGGGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGLTGSI*CRVAST
Trigger: CGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAA...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCTCTGCTCGATGTATGTaGAGATGTCGATTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFSARCM*RCRFPL
Trigger: CAGAGGAAATCGACATCTCCACATACATCGAGCAGA...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp AATAACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAGGCGGCTCTGGCACGTaGTGGTTACCGGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NNKFILIQSLASQQWRLEGGSGT*WLPALL
Trigger: GAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC...TTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCTTCCTCTGGAAGTTCTaGCACATTAACTTCAAACCG +
Preference number: 4 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFFLWKF*HINFKP
Trigger: CGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAA...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CCA 90 bp AATAACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAATCCCGGACTTGGCCTaGCACAGGACGTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: NNKFILIQSLASQQWRLEIPDLA*HRTSMP
Trigger: GGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGAT...TTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCACGAAGATTATCACCTaGTTAAACTCCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFTKIIT*LNSSTS
Trigger: GGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGT...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR TCA 90 bp GTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTCACATTCTTTAGGCTaGAGCTCCTATTCCGCACGA +
Preference number: 4 (lower is better)
Translates to: VYSHTISSFSTVAPGKGRSHSLG*SSYSAR
Trigger: TCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGA...CCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR TCA 90 bp TTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTCATGCAGCGCTGCACTaGCTTGACGAAGATTATCAC +
Preference number: 4 (lower is better)
Translates to: FILIQSLASQQWRLERGGHAALH*LDEDYH
Trigger: GTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATG...ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242776.9
CDS-3UTR CCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGGGAATGCACTCATGCTaGACCTCAGAAGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGGMHSC*TSEGCS
Trigger: TGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCC...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp AACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGCACTGCTTCTCGTGTaGTGTCAGGCGGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: NKFILIQSLASQQWRLERALLLV*CQAEDL
Trigger: GAGATCTTCCGCCTGACACCACACGAGAAGCAGTGC...CCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp AATAACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAGGCTCTGGCACGTGGTaGTTACCGGCTCTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: NNKFILIQSLASQQWRLEGSGTW*LPALLD
Trigger: ATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC...TTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR TCA 90 bp AACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGAGAACACAGACACCTTaGCGCTGGGCATGTACTTGG +
Preference number: 4 (lower is better)
Translates to: NKFILIQSLASQQWRLERRTQTP*RWACTW
Trigger: CCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCT...CCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR TCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGTCACATTCTTTAGGCTaGAGCTCCTATTCCGCACGA +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGSHSLG*SSYSAR
Trigger: TCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGA...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp AACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGTGGACCTCAGAAGGATaGTCAAAGCCACAGTCCACG +
Preference number: 4 (lower is better)
Translates to: NKFILIQSLASQQWRLERWTSEG*SKPQST
Trigger: CGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCA...CCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp AACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGTGGGGAATGCACTCATaGTGGACCTCAGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: NKFILIQSLASQQWRLERWGMHS*WTSEGC
Trigger: GCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCA...CCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR TCA 90 bp AACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGAGCGCTGCACTGACTTaGCGAAGATTATCACCTGGT +
Preference number: 4 (lower is better)
Translates to: NKFILIQSLASQQWRLERSAALT*RRLSPG
Trigger: ACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCT...CCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242776.9
CDS-3UTR GCA 90 bp AACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGACCTCCATGGGATCCTaGATGAACTTCCTGCACACA +
Preference number: 4 (lower is better)
Translates to: NKFILIQSLASQQWRLERTSMGS*MNFLHT
Trigger: TGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGT...CCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp AATAACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAGCACTGCTTCTCGTGTaGTGTCAGGCGGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: NNKFILIQSLASQQWRLEALLLV*CQAEDL
Trigger: GAGATCTTCCGCCTGACACCACACGAGAAGCAGTGC...TTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGACTTCAAACCGGTCCTaGACGTCATTGAGGATTTTG +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGTSNRS*TSLRIL
Trigger: CAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGT...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGTCTGCTCGATGTATGTaGAGATGTCGATTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGSARCM*RCRFPL
Trigger: CAGAGGAAATCGACATCTCCACATACATCGAGCAGA...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp AATAACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAATGGACCTCAGAAGGATaGTCAAAGCCACAGTCCACG +
Preference number: 4 (lower is better)
Translates to: NNKFILIQSLASQQWRLEWTSEG*SKPQST
Trigger: CGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCA...TTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR GCA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGTTCCTCTGGAAGTTCTaGCACATTAACTTCAAACCG +
Preference number: 4 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGFLWKF*HINFKP
Trigger: CGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAA...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CCA 90 bp AATAACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAACTTCAAACCGGTCCTaGACGTCATTGAGGATTTTG +
Preference number: 4 (lower is better)
Translates to: NNKFILIQSLASQQWRLETSNRS*TSLRIL
Trigger: CAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGT...TTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS GCA 90 bp GAGGAAAGGAGGCTCCGCCGGCTCCCAGCATCCCAGCATCCTCCGTaGCATGTGGGCCGTGCGGGTGTCCTGGGGCCCCAGGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: EERRLRRLPASQHPP*HVGRAGVLGPQAPG
Trigger: GCCTGGAGCCTGGGGCCCCAGGACACCCGCACGGCCCACATGGCACGGAGGATGCTGGGATGCTGGGAGCCGGCGGAGCCTCCTTTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587730.5
ENST00000588542.5
ENST00000589318.5
ENST00000592391.5
CDS GCA 90 bp TGCACATCCCGCCGCATGTACGCTGGCGCGGAGCAGCCGTGCCCGTaGGCCTCGAGCCACGCTTCAGGGAGGGGAGCCCAGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CTSRRMYAGAEQPCP*ASSHASGRGAQLLQ
Trigger: CTGGAGCAGCTGGGCTCCCCTCCCTGAAGCGTGGCTCGAGGCGCACGGGCACGGCTGCTCCGCGCCAGCGTACATGCGGCGGGATGTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588542.5
CDS GCA 90 bp GCGGGAGGAGCTGCAATCCACTTACACGCTGGCGCGGAGCAGCCGTaGCCGTGCGCCTCGAGCCACGCTTCAGGGAGGGGAGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: AGGAAIHLHAGAEQP*PCASSHASGRGAQL
Trigger: CAGCTGGGCTCCCCTCCCTGAAGCGTGGCTCGAGGCGCACGGGCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592391.5
ENST00000592927.5
ENST00000593026.1
CDS GCA 90 bp GGAGCTGCAATCCACTTACACGCTGGCGCGGAGCAGCCGTGCCCGTaGGCCTCGAGCCACGCTTCAGGGAGGGGAGCCCAGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GAAIHLHAGAEQPCP*ASSHASGRGAQLLQ
Trigger: CTGGAGCAGCTGGGCTCCCCTCCCTGAAGCGTGGCTCGAGGCGCACGGGCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592391.5
ENST00000592927.5
ENST00000593026.1
CDS CCA 90 bp CCCAGACCAGACCCAGACCCCTCCCAACCTGTGCCAGGGAGCCAGTaGCACCGTGACGAGGGCAGAGTGAGCCGCGGGAGTGGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: PRPDPDPSQPVPGSQ*HRDEGRVSRGSGQS
Trigger: GGACTGGCCACTCCCGCGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCTCCCTGGCACAGGTTGGGAGGGGTCTGGGTCTGGTCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587730.5
CDS TCA 90 bp AGACCCAGACCCCTCCCAACCTGTGCCAGGGAGCCAGTGGCACCGTaGCGAGGGCAGAGTGAGCCGCGGGAGTGGCCAGTCCTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: RPRPLPTCAREPVAP*RGQSEPREWPVLVP
Trigger: AGGCACCAGGACTGGCCACTCCCGCGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCTCCCTGGCACAGGTTGGGAGGGGTCTGGGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587730.5
CDS CCA 90 bp ACGGGCCCCTCCCTCACCCACGGCAAACTGGAGGCGGCACCGCTCTaGGCGGGCAGGGCTGGTCTTGTCTTGGTGAGGACCTGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: TGPSLTHGKLEAAPL*AGRAGLVLVRTWAR
Trigger: TCTTGCCCAGGTCCTCACCAAGACAAGACCAGCCCTGCCCGCCCAGAGCGGTGCCGCCTCCAGTTTGCCGTGGGTGAGGGAGGGGCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586558.5
CDS-3UTR CAA 90 bp TGGAAAGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACCCCGGCCAAACAGATaGGTGGCCACCAGGATCCGC +
Preference number: 5 (lower is better)
Translates to: WKGEVKLHAGGSGWAALAPRPNR*VATRIR
Trigger: GCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGG...TGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CAA 90 bp TGGAAAGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCAGTGATGGCTAGGCCTTaGGTGCCAAAGCGACCCGCC +
Preference number: 5 (lower is better)
Translates to: WKGEVKLHAGGSGWAALAVMARP*VPKRPA
Trigger: GGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCAC...TGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242776.9
ENST00000324340.13
ENST00000588692.5
CDS GCA 90 bp ATGCTGATACACGGCCCAAGGCCCCAACCTGCACGGCCCAGCACCTaGGAACAGGAGGCCTCAGGGGACCAAGGCAGGCCTGAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: MLIHGPRPQPARPST*EQEASGDQGRPESL
Trigger: GAGGCTCTCAGGCCTGCCTTGGTCCCCTGAGGCCTCCTGTTCGCAGGTGCTGGGCCGTGCAGGTTGGGGCCTTGGGCCGTGTATCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590260.5
ENST00000593026.1
CDS GCA 90 bp GGGAGGTGGGAGGGGCGGGCAGGGATCACCTCTGGGCATCTCGCCTaGCCAGAACCTTCCAGTGGGCGACTCCTTTGTGCGACACTTCCC +
Preference number: 5 (lower is better)
Translates to: GRWEGRAGITSGHLA*PEPSSGRLLCATLP
Trigger: GGGAAGTGTCGCACAAAGGAGTCGCCCACTGGAAGGTTCTGGGCAGGCGAGATGCCCAGAGGTGATCCCTGCCCGCCCCTCCCACCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000587730.5
ENST00000588542.5
ENST00000588692.5
ENST00000589318.5
ENST00000592391.5
CDS GCA 90 bp AGGAGGAAACCGCTCCATGCTGATACACGGCCCAAGGCCCCAACCTaGACGGCCCAGCACCTGCGAACAGGAGGCCTCAGGGGACCAAGG +
Preference number: 5 (lower is better)
Translates to: RRKPLHADTRPKAPT*TAQHLRTGGLRGPR
Trigger: CCTTGGTCCCCTGAGGCCTCCTGTTCGCAGGTGCTGGGCCGTGCAGGTTGGGGCCTTGGGCCGTGTATCAGCATGGAGCGGTTTCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590260.5
ENST00000593026.1
CDS CCA 90 bp ATCTCCCACCGGCCCTGTCGGGGCTCACTGAGGGCAGGCGGGGCCTaGAACCAACCCAACAGGTGGCAGAAGCCTCATACTCCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: ISHRPCRGSLRAGGA*NQPNRWQKPHTPRG
Trigger: ACCTCTGGGAGTATGAGGCTTCTGCCACCTGTTGGGTTGGTTCCAGGCCCCGCCTGCCCTCAGTGAGCCCCGACAGGGCCGGTGGGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 90 bp TCAGAAGAGGCCGAGTCCGGACAAGGCCACAGACACCTGCAGGGCTaGGGTATCCGCCTGGTCAAAGCAGAACGCCCCACTGCCGAGGGC +
Preference number: 5 (lower is better)
Translates to: SEEAESGQGHRHLQG*GIRLVKAERPTAEG
Trigger: GCCCTCGGCAGTGGGGCGTTCTGCTTTGACCAGGCGGATACCCCAGCCCTGCAGGTGTCTGTGGCCTTGTCCGGACTCGGCCTCTTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586558.5
CDS TCA 90 bp AGGGACGAGAACCTGGATGCACCCCCGTGCAGGATCCTCACCAGTTaGCCGGGGGCCCACAGTGAGGGCAATCAGAAGAGGCCGAGTCCG +
Preference number: 5 (lower is better)
Translates to: RDENLDAPPCRILTS*PGAHSEGNQKRPSP
Trigger: CGGACTCGGCCTCTTCTGATTGCCCTCACTGTGGGCCCCCGGTCAACTGGTGAGGATCCTGCACGGGGGTGCATCCAGGTTCTCGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000593008.1
CDS TCA 90 bp ACCCACTCAAGAGCCTTCCGCCTGCTATGGGGCCCGCCTAGTCACTaGCTCTCAGCTGGGGCTGCAAGGGCAGAGGACTCACCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: THSRAFRLLWGPPSH*LSAGAARAEDSPSC
Trigger: GCAGCTGGGTGAGTCCTCTGCCCTTGCAGCCCCAGCTGAGAGTCAGTGACTAGGCGGGCCCCATAGCAGGCGGAAGGCTCTTGAGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590556.1
CDS TCA 90 bp TGGAGGCGGCACCGCTCTGGGCGGGCAGGGCTGGTCTTGTCTTGGTaGGGACCTGGGCAAGAGGATAACACCCAGAAGGCGTACCCTCAG +
Preference number: 5 (lower is better)
Translates to: WRRHRSGRAGLVLSW*GPGQEDNTQKAYPQ
Trigger: CTGAGGGTACGCCTTCTGGGTGTTATCCTCTTGCCCAGGTCCTCACCAAGACAAGACCAGCCCTGCCCGCCCAGAGCGGTGCCGCCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586558.5
CDS GCA 90 bp TGCTGGACTGCAGGAGAAGCAGAGCGTGAGGGACGAGAACCTGGATaGACCCCCGTGCAGGATCCTCACCAGTTGACCGGGGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: CWTAGEAEREGREPG*TPVQDPHQLTGGPQ
Trigger: CTGTGGGCCCCCGGTCAACTGGTGAGGATCCTGCACGGGGGTGCATCCAGGTTCTCGTCCCTCACGCTCTGCTTCTCCTGCAGTCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000593008.1
CDS CCA 90 bp GCATGCCTTTACGTCCAGGAGGGACGGGGGCTTGCTTGGGCCCCGTaGTCCCATTCGGCTCGGGCTCAGAAACAGCACATCCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: ACLYVQEGRGLAWAP*SHSARAQKQHIPLP
Trigger: TGGCAGAGGGATGTGCTGTTTCTGAGCCCGAGCCGAATGGGACCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 90 bp CACCCACGGCAAACTGGAGGCGGCACCGCTCTGGGCGGGCAGGGCTaGTCTTGTCTTGGTGAGGACCTGGGCAAGAGGATAACACCCAGA +
Preference number: 5 (lower is better)
Translates to: HPRQTGGGTALGGQG*SCLGEDLGKRITPR
Trigger: TCTGGGTGTTATCCTCTTGCCCAGGTCCTCACCAAGACAAGACCAGCCCTGCCCGCCCAGAGCGGTGCCGCCTCCAGTTTGCCGTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586558.5
CDS GCA 90 bp GAGGGCAATCAGAAGAGGCCGAGTCCGGACAAGGCCACAGACACCTaGAGGGCTGGGGTATCCGCCTGGTCAAAGCAGAACGCCCCACTG +
Preference number: 5 (lower is better)
Translates to: EGNQKRPSPDKATDT*RAGVSAWSKQNAPL
Trigger: CAGTGGGGCGTTCTGCTTTGACCAGGCGGATACCCCAGCCCTGCAGGTGTCTGTGGCCTTGTCCGGACTCGGCCTCTTCTGATTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586558.5
CDS CCA 90 bp GGCAGGGATCACCTCTGGGCATCTCGCCTGCCCAGAACCTTCCAGTaGGCGACTCCTTTGTGCGACACTTCCCAGAGGACCTGCTGCACC +
Preference number: 5 (lower is better)
Translates to: GRDHLWASRLPRTFQ*ATPLCDTSQRTCCT
Trigger: GGTGCAGCAGGTCCTCTGGGAAGTGTCGCACAAAGGAGTCGCCCACTGGAAGGTTCTGGGCAGGCGAGATGCCCAGAGGTGATCCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587730.5
ENST00000588542.5
ENST00000589318.5
ENST00000592391.5
CDS CCA 90 bp GGTGTCAGGCGGAAGATCTCCTGCACATCCCGCCGCATGTCTAGGTaGGGAGGGCAAGACATGGGTGGGCATGAGCGTCTGCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: GVRRKISCTSRRMSR*GGQDMGGHERLPCR
Trigger: CCTGCATGGCAGACGCTCATGCCCACCCATGTCTTGCCCTCCCCACCTAGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587730.5
CDS-3UTR CAA 90 bp CGGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAAGCTGGTGTGCTCTCTaGAGGAGCCTGGGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RVGGSGTWWLPALLDVCGSWCAL*RSLGLF
Trigger: GAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCT...TCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CAA 90 bp TGGAAAGGGGAGGTGAAGCTGCATGCGGGCGGCTCCGGGTGGGCGGCTCTGGCACAGCGCTGCACTGACTaGACGAAGATTATCACCTGG +
Preference number: 5 (lower is better)
Translates to: WKGEVKLHAGGSGWAALAQRCTD*TKIITW
Trigger: CCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTG...TGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000588692.5
CDS-3UTR CAA 90 bp GCAGGCGCGGGAGGAGCTGCAATCCACTTACACGCTGGCGCGGAGCAGCCGTGCCAGCGCTGCACTGACTaGACGAAGATTATCACCTGG +
Preference number: 5 (lower is better)
Translates to: AGAGGAAIHLHAGAEQPCQRCTD*TKIITW
Trigger: CCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTG...GCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGCTCCTCCCGCGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592927.5
CDS GCA 90 bp CAGAGGTATGTGTGCATGCCTTTACGTCCAGGAGGGACGGGGGCTTaGTTGGGCCCCGTGGTCCCATTCGGCTCGGGCTCAGAAACAGCA +
Preference number: 5 (lower is better)
Translates to: QRYVCMPLRPGGTGA*LGPVVPFGSGSETA
Trigger: TGCTGTTTCTGAGCCCGAGCCGAATGGGACCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCACACATACCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS GCA 90 bp CCCAACAGGTGGCAGAAGCCTCATACTCCCAGAGGTATGTGTGCATaGCTTTACGTCCAGGAGGGACGGGGGCTTGCTTGGGCCCCGTGG +
Preference number: 5 (lower is better)
Translates to: PNRWQKPHTPRGMCA*LYVQEGRGLAWAPW
Trigger: CCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCACACATACCTCTGGGAGTATGAGGCTTCTGCCACCTGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 90 bp GGGCCAGAGCCGAGGCTAACAAAGCTGCAGAAACCAAGTGGCGCCTaGTCCAGTCTGGCCCGAGGGACTCACCTTGACGCTGGGCATGTA +
Preference number: 5 (lower is better)
Translates to: GPEPRLTKLQKPSGA*SSLARGTHLDAGHV
Trigger: TACATGCCCAGCGTCAAGGTGAGTCCCTCGGGCCAGACTGGACCAGGCGCCACTTGGTTTCTGCAGCTTTGTTAGCCTCGGCTCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000590260.5
CDS CCA 90 bp GGTATGTGTGCATGCCTTTACGTCCAGGAGGGACGGGGGCTTGCTTaGGCCCCGTGGTCCCATTCGGCTCGGGCTCAGAAACAGCACATC +
Preference number: 5 (lower is better)
Translates to: GMCACLYVQEGRGLA*APWSHSARAQKQHI
Trigger: GATGTGCTGTTTCTGAGCCCGAGCCGAATGGGACCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCACACATACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS-3UTR CAA 90 bp GGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGTGATGGCTAGGCCTTaGGTGCCAAAGCGACCCGCC +
Preference number: 5 (lower is better)
Translates to: GGSGTWWLPALLDVCGDVVMARP*VPKRPA
Trigger: GGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCAC...GACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS GCA 90 bp CCAACCCAACAGGTGGCAGAAGCCTCATACTCCCAGAGGTATGTGTaGATGCCTTTACGTCCAGGAGGGACGGGGGCTTGCTTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PTQQVAEASYSQRYV*MPLRPGGTGACLGP
Trigger: GGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCACACATACCTCTGGGAGTATGAGGCTTCTGCCACCTGTTGGGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 90 bp CGGGGCTCACTGAGGGCAGGCGGGGCCTGGAACCAACCCAACAGGTaGCAGAAGCCTCATACTCCCAGAGGTATGTGTGCATGCCTTTAC +
Preference number: 5 (lower is better)
Translates to: RGSLRAGGAWNQPNR*QKPHTPRGMCACLY
Trigger: GTAAAGGCATGCACACATACCTCTGGGAGTATGAGGCTTCTGCCACCTGTTGGGTTGGTTCCAGGCCCCGCCTGCCCTCAGTGAGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 90 bp GGCAGGGATCACCTCTGGGCATCTCGCCTGCCCAGAACCTTCCAGTaGGCGACTCCTTTGTGCGACACTTCCCAGAGGACATCCTGCATG +
Preference number: 5 (lower is better)
Translates to: GRDHLWASRLPRTFQ*ATPLCDTSQRTSCM
Trigger: CATGCAGGATGTCCTCTGGGAAGTGTCGCACAAAGGAGTCGCCCACTGGAAGGTTCTGGGCAGGCGAGATGCCCAGAGGTGATCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR CAA 90 bp GGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCAGCTGGTGTGCTCTCTaGAGGAGCCTGGGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GGSGTWWLPALLDVCGDVSWCAL*RSLGLF
Trigger: GAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCT...GACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CAA 90 bp GGGTGGGCGGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGCAGCGCTGCACTGACTaGACGAAGATTATCACCTGG +
Preference number: 5 (lower is better)
Translates to: GWAALARGGYRLCSMYVEQRCTD*TKIITW
Trigger: CCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTG...CTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS-3UTR CAA 90 bp TCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATTTCCCCCGGCCAAACAGATaGGTGGCCACCAGGATCCGC +
Preference number: 5 (lower is better)
Translates to: SGTWWLPALLDVCGDVDFPRPNR*VATRIR
Trigger: GCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGG...GAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324340.13
ENST00000588692.5
CDS-3UTR CAA 90 bp GGCTCTGGCACGTGGTGGTTACCGGCTCTGCTCGATGTATGTGGAGATGTCGATCAGTGGGCGACTCCTTaGTGCGACACTTCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: GSGTWWLPALLDVCGDVDQWATP*CDTSQR
Trigger: CCTCTGGGAAGTGTCGCACAAAGGAGTCGCCCACTG...ATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588692.5
CDS CCA 90 bp AAACCTCAAAGGCAGCTGCCCCTGCCAAGCTTGGTAAATGCTGGCTaGGCCAGAGCCGAGGCTAACAAAGCTGCAGAAACCAAGTGGCGC +
Preference number: 5 (lower is better)
Translates to: KPQRQLPLPSLVNAG*ARAEANKAAETKWR
Trigger: GCGCCACTTGGTTTCTGCAGCTTTGTTAGCCTCGGCTCTGGCCCAGCCAGCATTTACCAAGCTTGGCAGGGGCAGCTGCCTTTGAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000590260.5
CDS TCA 90 bp CTTCTTGATGGAGAGACCACCGAAGAACACAGACACCTATGGGGATaGGGAGGAAACCGCTCCATGCTGATACACGGCCCAAGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: LLDGETTEEHRHLWG*GGNRSMLIHGPRPQ
Trigger: TTGGGGCCTTGGGCCGTGTATCAGCATGGAGCGGTTTCCTCCTCATCCCCATAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590260.5
ENST00000593026.1
CDS-3UTR CAA 90 bp TTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGTCCCCGGCCAAACAGATaGGTGGCCACCAGGATCCGC +
Preference number: 5 (lower is better)
Translates to: FILIQSLASQQWRLERGGPRPNR*VATRIR
Trigger: GCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGG...ACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS GCA 90 bp CTGTTCTGCCATGATGCTCAGCACCTTTGCACTTGCTGTTCCTGCTaGCTGGAAGGGTCACAAATCCCCCACTTCTTTTGGGCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LFCHDAQHLCTCCSC*LEGSQIPHFFWASF
Trigger: AAAGGAGGCCCAAAAGAAGTGGGGGATTTGTGACCCTTCCAGGCAGCAGGAACAGCAAGTGCAAAGGTGCTGAGCATCATGGCAGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590696.1
CDS CCA 90 bp AACATCGCTCAAAAGCTGGATGTAAGCTCTGGCCCGACTCAGGTGTaGACCAAGCTTGACTCCCAGTTTGACAAGACCGAGGGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: NIAQKLDVSSGPTQV*TKLDSQFDKTEGRK
Trigger: TTTCCTCCCCTCGGTCTTGTCAAACTGGGAGTCAAGCTTGGTCCACACCTGAGTCGGGCCAGAGCTTACATCCAGCTTTTGAGCGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587730.5
ENST00000588542.5
ENST00000589318.5
ENST00000592391.5
CDS-3UTR CAA 90 bp GTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAGGAAGAACACAGACACCTaGACGCTGGGCATGTACTTG +
Preference number: 5 (lower is better)
Translates to: VYSHTISSFSTVAPGKGRKNTDT*TLGMYL
Trigger: CAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTT...CCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CAA 90 bp AATAACAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGCTGGTGTGCTCTCTaGAGGAGCCTGGGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: NNKFILIQSLASQQWRLESWCAL*RSLGLF
Trigger: GAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCT...TTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS-3UTR CAA 90 bp CAAGTTTATTCTCATACAATCTCTAGCTTCTCAACAGTGGCGCCTGGAAAGGGGAAGAACACAGACACCTaGACGCTGGGCATGTACTTG +
Preference number: 5 (lower is better)
Translates to: QVYSHTISSFSTVAPGKGKNTDT*TLGMYL
Trigger: CAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTT...CCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242776.9
ENST00000324340.13
CDS GCA 72 bp CGCCGCATGTACGCTGGCGCGGAGCAGCCGTGCCCGTaGGCCTCGAGCCACGCTTCAGGGAGGGGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: RRMYAGAEQPCP*ASSHASGRGAQ
Trigger: CTGGGCTCCCCTCCCTGAAGCGTGGCTCGAGGCGCACGGGCACGGCTGCTCCGCGCCAGCGTACATGCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588542.5
CDS GCA 72 bp ACATCCCGCCGCATGTACGCTGGCGCGGAGCAGCCGTaGCCGTGCGCCTCGAGCCACGCTTCAGGGAGGGGA +
Preference number: 6 (lower is better)
Translates to: TSRRMYAGAEQP*PCASSHASGRG
Trigger: TCCCCTCCCTGAAGCGTGGCTCGAGGCGCACGGGCACGGCTGCTCCGCGCCAGCGTACATGCGGCGGGATGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588542.5
CDS TCA 72 bp CCCCTCCCAACCTGTGCCAGGGAGCCAGTGGCACCGTaGCGAGGGCAGAGTGAGCCGCGGGAGTGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: PLPTCAREPVAP*RGQSEPREWPV
Trigger: GACTGGCCACTCCCGCGGCTCACTCTGCCCTCGTCACGGTGCCACTGGCTCCCTGGCACAGGTTGGGAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587730.5
CDS GCA 72 bp ATCCACTTACACGCTGGCGCGGAGCAGCCGTGCCCGTaGGCCTCGAGCCACGCTTCAGGGAGGGGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: IHLHAGAEQPCP*ASSHASGRGAQ
Trigger: CTGGGCTCCCCTCCCTGAAGCGTGGCTCGAGGCGCACGGGCACGGCTGCTCCGCGCCAGCGTGTAAGTGGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592391.5
ENST00000592927.5
ENST00000593026.1
CDS GCA 72 bp GCTGCAATCCACTTACACGCTGGCGCGGAGCAGCCGTaGCCGTGCGCCTCGAGCCACGCTTCAGGGAGGGGA +
Preference number: 6 (lower is better)
Translates to: AAIHLHAGAEQP*PCASSHASGRG
Trigger: TCCCCTCCCTGAAGCGTGGCTCGAGGCGCACGGGCACGGCTGCTCCGCGCCAGCGTGTAAGTGGATTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587730.5
ENST00000592391.5
ENST00000592927.5
ENST00000593026.1
CDS CCA 72 bp TCCCTCACCCACGGCAAACTGGAGGCGGCACCGCTCTaGGCGGGCAGGGCTGGTCTTGTCTTGGTGAGGACC +
Preference number: 6 (lower is better)
Translates to: SLTHGKLEAAPL*AGRAGLVLVRT
Trigger: GGTCCTCACCAAGACAAGACCAGCCCTGCCCGCCCAGAGCGGTGCCGCCTCCAGTTTGCCGTGGGTGAGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586558.5
CDS GCA 72 bp GTGTGCATGCCTTTACGTCCAGGAGGGACGGGGGCTTaGTTGGGCCCCGTGGTCCCATTCGGCTCGGGCTCA +
Preference number: 6 (lower is better)
Translates to: VCMPLRPGGTGA*LGPVVPFGSGS
Trigger: TGAGCCCGAGCCGAATGGGACCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 72 bp CGGCCCTGTCGGGGCTCACTGAGGGCAGGCGGGGCCTaGAACCAACCCAACAGGTGGCAGAAGCCTCATACT +
Preference number: 6 (lower is better)
Translates to: RPCRGSLRAGGA*NQPNRWQKPHT
Trigger: AGTATGAGGCTTCTGCCACCTGTTGGGTTGGTTCCAGGCCCCGCCTGCCCTCAGTGAGCCCCGACAGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 72 bp AAGGCCACAGACACCTGCAGGGCTGGGGTATCCGCCTaGTCAAAGCAGAACGCCCCACTGCCGAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: KATDTCRAGVSA*SKQNAPLPRAA
Trigger: GGCTGCCCTCGGCAGTGGGGCGTTCTGCTTTGACCAGGCGGATACCCCAGCCCTGCAGGTGTCTGTGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586558.5
CDS CAA 72 bp TGTGTGCATGCCTTTACGTCCAGGAGGGACGGGGGCTaGCTTGGGCCCCGTGGTCCCATTCGGCTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: CVHAFTSRRDGG*LGPRGPIRLGL
Trigger: GAGCCCGAGCCGAATGGGACCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS TCA 72 bp GGGGCCAGGAAGGGAGGAGCCCACCCACCTGTCCGTTaGCAGGCTCAATCTGCTGTAGGGTGGCCAGCACGA +
Preference number: 6 (lower is better)
Translates to: GARKGGAHPPVR*QAQSAVGWPAR
Trigger: TCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGGGTGGGCTCCTCCCTTCCTGGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592632.5
CDS CCA 72 bp TACGTCCAGGAGGGACGGGGGCTTGCTTGGGCCCCGTaGTCCCATTCGGCTCGGGCTCAGAAACAGCACATC +
Preference number: 6 (lower is better)
Translates to: YVQEGRGLAWAP*SHSARAQKQHI
Trigger: GATGTGCTGTTTCTGAGCCCGAGCCGAATGGGACCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 72 bp GCATGCCTTTACGTCCAGGAGGGACGGGGGCTTGCTTaGGCCCCGTGGTCCCATTCGGCTCGGGCTCAGAAA +
Preference number: 6 (lower is better)
Translates to: ACLYVQEGRGLA*APWSHSARAQK
Trigger: TTTCTGAGCCCGAGCCGAATGGGACCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 72 bp CATCCCGCCGCATGTCTAGGTGGGGAGGGCAAGACATaGGTGGGCATGAGCGTCTGCCATGCAGGACCCCCA +
Preference number: 6 (lower is better)
Translates to: HPAACLGGEGKT*VGMSVCHAGPP
Trigger: TGGGGGTCCTGCATGGCAGACGCTCATGCCCACCCATGTCTTGCCCTCCCCACCTAGACATGCGGCGGGATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587730.5
CDS CCA 72 bp GCCGAGTCCGGACAAGGCCACAGACACCTGCAGGGCTaGGGTATCCGCCTGGTCAAAGCAGAACGCCCCACT +
Preference number: 6 (lower is better)
Translates to: AESGQGHRHLQG*GIRLVKAERPT
Trigger: AGTGGGGCGTTCTGCTTTGACCAGGCGGATACCCCAGCCCTGCAGGTGTCTGTGGCCTTGTCCGGACTCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586558.5
CDS CAA 72 bp TGCATGCCTTTACGTCCAGGAGGGACGGGGGCTTGCTaGGGCCCCGTGGTCCCATTCGGCTCGGGCTCAGAA +
Preference number: 6 (lower is better)
Translates to: CMPLRPGGTGAC*GPVVPFGSGSE
Trigger: TTCTGAGCCCGAGCCGAATGGGACCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CAA 72 bp TGGGGCCAGGAAGGGAGGAGCCCACCCACCTGTCCGTaGACAGGCTCAATCTGCTGTAGGGTGGCCAGCACG +
Preference number: 6 (lower is better)
Translates to: WGQEGRSPPTCP*TGSICCRVAST
Trigger: CGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGGGTGGGCTCCTCCCTTCCTGGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592632.5
CDS TCA 72 bp GTGCAGGATCCTCACCAGTTGACCGGGGGCCCACAGTaGGGGCAATCAGAAGAGGCCGAGTCCGGACAAGGC +
Preference number: 6 (lower is better)
Translates to: VQDPHQLTGGPQ*GQSEEAESGQG
Trigger: GCCTTGTCCGGACTCGGCCTCTTCTGATTGCCCTCACTGTGGGCCCCCGGTCAACTGGTGAGGATCCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000593008.1
CDS GCA 72 bp CAACTTCGGTTTTCCGCCGGGCGCTCAGACACGAGTTaGTGCGCTTCCTGCCTCTTGCGTCGGGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: QLRFSAGRSDTS*CASCLLRRAAA
Trigger: AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454233.6
CDS GCA 72 bp GCAGGAGAAGCAGAGCGTGAGGGACGAGAACCTGGATaGACCCCCGTGCAGGATCCTCACCAGTTGACCGGG +
Preference number: 6 (lower is better)
Translates to: AGEAEREGREPG*TPVQDPHQLTG
Trigger: CCCGGTCAACTGGTGAGGATCCTGCACGGGGGTGCATCCAGGTTCTCGTCCCTCACGCTCTGCTTCTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000593008.1
CDS CAA 90 bp CCAGAGGTATGTGTGCATGCCTTTACGTCCAGGAGGGACGGGGGCTaGCTTGGGCCCCGTGGTCCCATTCGGCTCGGGCTCAGAAACAGC +
Preference number: 6 (lower is better)
Translates to: PEVCVHAFTSRRDGG*LGPRGPIRLGLRNS
Trigger: GCTGTTTCTGAGCCCGAGCCGAATGGGACCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCACACATACCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS TCA 72 bp AACCTGGATGCACCCCCGTGCAGGATCCTCACCAGTTaGCCGGGGGCCCACAGTGAGGGCAATCAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: NLDAPPCRILTS*PGAHSEGNQKR
Trigger: CCTCTTCTGATTGCCCTCACTGTGGGCCCCCGGTCAACTGGTGAGGATCCTGCACGGGGGTGCATCCAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000593008.1
CDS GCA 72 bp CAGAAGAGGCCGAGTCCGGACAAGGCCACAGACACCTaGAGGGCTGGGGTATCCGCCTGGTCAAAGCAGAAC +
Preference number: 6 (lower is better)
Translates to: QKRPSPDKATDT*RAGVSAWSKQN
Trigger: GTTCTGCTTTGACCAGGCGGATACCCCAGCCCTGCAGGTGTCTGTGGCCTTGTCCGGACTCGGCCTCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586558.5
CDS CCA 72 bp CACCTCTGGGCATCTCGCCTGCCCAGAACCTTCCAGTaGGCGACTCCTTTGTGCGACACTTCCCAGAGGACC +
Preference number: 6 (lower is better)
Translates to: HLWASRLPRTFQ*ATPLCDTSQRT
Trigger: GGTCCTCTGGGAAGTGTCGCACAAAGGAGTCGCCCACTGGAAGGTTCTGGGCAGGCGAGATGCCCAGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587730.5
ENST00000588542.5
ENST00000589318.5
ENST00000592391.5
CDS CCA 72 bp GCCAGAGCCGAGGCTAACAAAGCTGCAGAAACCAAGTaGCGCCTGGTCCAGTCTGGCCCGAGGGACTCACCT +
Preference number: 6 (lower is better)
Translates to: ARAEANKAAETK*RLVQSGPRDSP
Trigger: AGGTGAGTCCCTCGGGCCAGACTGGACCAGGCGCCACTTGGTTTCTGCAGCTTTGTTAGCCTCGGCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000590260.5
CDS CAA 72 bp GCCCGACTCAGGTGTGGACCAAGCTTGACTCCCAGTTaGACAAGACCGAGGGGAGGAAAGGAGGCTCCGCCG +
Preference number: 6 (lower is better)
Translates to: ARLRCGPSLTPS*TRPRGGKEAPP
Trigger: CGGCGGAGCCTCCTTTCCTCCCCTCGGTCTTGTCAAACTGGGAGTCAAGCTTGGTCCACACCTGAGTCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587730.5
ENST00000588542.5
ENST00000589318.5
ENST00000592391.5
CDS CAA 90 bp TGCCATGATGCTGTAATCCCAGCTACTTGGAGGCAGGAGAATCACTaGAACCCCCTCGTCCCTCTCCAAATGGCCCCAGGCCGCCGCGGG +
Preference number: 6 (lower is better)
Translates to: CHDAVIPATWRQENH*NPLVPLQMAPGRRG
Trigger: CCCGCGGCGGCCTGGGGCCATTTGGAGAGGGACGAGGGGGTTCAAGTGATTCTCCTGCCTCCAAGTAGCTGGGATTACAGCATCATGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586993.5
CDS CAA 90 bp AGGTATGTGTGCATGCCTTTACGTCCAGGAGGGACGGGGGCTTGCTaGGGCCCCGTGGTCCCATTCGGCTCGGGCTCAGAAACAGCACAT +
Preference number: 6 (lower is better)
Translates to: RYVCMPLRPGGTGAC*GPVVPFGSGSETAH
Trigger: ATGTGCTGTTTCTGAGCCCGAGCCGAATGGGACCACGGGGCCCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCACACATACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 72 bp CACCTCTGGGCATCTCGCCTGCCCAGAACCTTCCAGTaGGCGACTCCTTTGTGCGACACTTCCCAGAGGACA +
Preference number: 6 (lower is better)
Translates to: HLWASRLPRTFQ*ATPLCDTSQRT
Trigger: TGTCCTCTGGGAAGTGTCGCACAAAGGAGTCGCCCACTGGAAGGTTCTGGGCAGGCGAGATGCCCAGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454233.6
ENST00000588692.5
CDS CCA 72 bp CAAAGCTGCAGAAACCAAGTGGCGCCTGGTCCAGTCTaGCCCGAGGGACTCACCTTGACGCTGGGCATGTAC +
Preference number: 6 (lower is better)
Translates to: QSCRNQVAPGPV*PEGLTLTLGMY
Trigger: GTACATGCCCAGCGTCAAGGTGAGTCCCTCGGGCCAGACTGGACCAGGCGCCACTTGGTTTCTGCAGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000590260.5
CDS CCA 72 bp CTGAGGGCAGGCGGGGCCTGGAACCAACCCAACAGGTaGCAGAAGCCTCATACTCCCAGAGGTATGTGTGCA +
Preference number: 6 (lower is better)
Translates to: LRAGGAWNQPNR*QKPHTPRGMCA
Trigger: TGCACACATACCTCTGGGAGTATGAGGCTTCTGCCACCTGTTGGGTTGGTTCCAGGCCCCGCCTGCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CAA 72 bp TCTCGCCTGCCCAGAACCTTCCAGTGGGCGACTCCTTaGTGCGACACTTCCCAGAGGACCTGCTGCACCAGA +
Preference number: 6 (lower is better)
Translates to: SRLPRTFQWATP*CDTSQRTCCTR
Trigger: TCTGGTGCAGCAGGTCCTCTGGGAAGTGTCGCACAAAGGAGTCGCCCACTGGAAGGTTCTGGGCAGGCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587730.5
ENST00000588542.5
ENST00000589318.5
ENST00000592391.5
CDS TCA 72 bp AATGCACTCATGCTGGACTGCAGGAGAAGCAGAGCGTaGGGGACGAGAACCTGGATGCACCCCCGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: NALMLDCRRSRA*GTRTWMHPRAG
Trigger: TCCTGCACGGGGGTGCATCCAGGTTCTCGTCCCTCACGCTCTGCTTCTCCTGCAGTCCAGCATGAGTGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000593008.1
CDS GCA 72 bp CAGGTGGCAGAAGCCTCATACTCCCAGAGGTATGTGTaGATGCCTTTACGTCCAGGAGGGACGGGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: QVAEASYSQRYV*MPLRPGGTGAC
Trigger: GCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCACACATACCTCTGGGAGTATGAGGCTTCTGCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CCA 72 bp AGGCAGCTGCCCCTGCCAAGCTTGGTAAATGCTGGCTaGGCCAGAGCCGAGGCTAACAAAGCTGCAGAAACC +
Preference number: 6 (lower is better)
Translates to: RQLPLPSLVNAG*ARAEANKAAET
Trigger: GGTTTCTGCAGCTTTGTTAGCCTCGGCTCTGGCCCAGCCAGCATTTACCAAGCTTGGCAGGGGCAGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000590260.5
CDS GCA 72 bp CGCCTGCCCAGAACCTTCCAGTGGGCGACTCCTTTGTaGGACACTTCCCAGAGGACATCCTGCATGAACTTC +
Preference number: 6 (lower is better)
Translates to: RLPRTFQWATPL*DTSQRTSCMNF
Trigger: GAAGTTCATGCAGGATGTCCTCTGGGAAGTGTCGCACAAAGGAGTCGCCCACTGGAAGGTTCTGGGCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454233.6
ENST00000588692.5
CDS GCA 72 bp TGGCAGAAGCCTCATACTCCCAGAGGTATGTGTGCATaGCTTTACGTCCAGGAGGGACGGGGGCTTGCTTGG +
Preference number: 6 (lower is better)
Translates to: WQKPHTPRGMCA*LYVQEGRGLAW
Trigger: CCAAGCAAGCCCCCGTCCCTCCTGGACGTAAAGGCATGCACACATACCTCTGGGAGTATGAGGCTTCTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587730.5
ENST00000590556.1
CDS CAA 72 bp TCTCGCCTGCCCAGAACCTTCCAGTGGGCGACTCCTTaGTGCGACACTTCCCAGAGGACATCCTGCATGAAC +
Preference number: 6 (lower is better)
Translates to: SRLPRTFQWATP*CDTSQRTSCMN
Trigger: GTTCATGCAGGATGTCCTCTGGGAAGTGTCGCACAAAGGAGTCGCCCACTGGAAGGTTCTGGGCAGGCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454233.6
ENST00000588692.5
CDS CAA 72 bp GCTGTAATCCCAGCTACTTGGAGGCAGGAGAATCACTaGAACCCCCTCGTCCCTCTCCAAATGGCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: AVIPATWRQENH*NPLVPLQMAPG
Trigger: GCCTGGGGCCATTTGGAGAGGGACGAGGGGGTTCAAGTGATTCTCCTGCCTCCAAGTAGCTGGGATTACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586993.5
CDS CAA 90 bp AGCAAAAACCACCGCAAACCTCAAAGGCAGCTGCCCCTGCCAAGCTaGGTAAATGCTGGCTGGGCCAGAGCCGAGGCTAACAAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: SKNHRKPQRQLPLPS*VNAGWARAEANKAA
Trigger: TGCAGCTTTGTTAGCCTCGGCTCTGGCCCAGCCAGCATTTACCAAGCTTGGCAGGGGCAGCTGCCTTTGAGGTTTGCGGTGGTTTTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586558.5
ENST00000590260.5
CDS TCA 72 bp AATGCACTCATGCTGGACTGCAGGAGAAGCAGAGCGTaGGGGACGAGAACCCTCAGAAGGATGCTCAAAGCC +
Preference number: 6 (lower is better)
Translates to: NALMLDCRRSRA*GTRTLRRMLKA
Trigger: GGCTTTGAGCATCCTTCTGAGGGTTCTCGTCCCTCACGCTCTGCTTCTCCTGCAGTCCAGCATGAGTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589675.5
CDS CCA 72 bp CAAAAGCTGGATGTAAGCTCTGGCCCGACTCAGGTGTaGACCAAGCTTGACTCCCAGTTTGACAAGACCGAG +
Preference number: 6 (lower is better)
Translates to: QKLDVSSGPTQV*TKLDSQFDKTE
Trigger: CTCGGTCTTGTCAAACTGGGAGTCAAGCTTGGTCCACACCTGAGTCGGGCCAGAGCTTACATCCAGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587730.5
ENST00000588542.5
ENST00000589318.5
ENST00000592391.5
CDS CAA 72 bp CTGCTGCCTGGAAGGGTCACAAATCCCCCACTTCTTTaGGGCCTCCTTTGCTCCAGAAAGGCATTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: LLPGRVTNPPLL*GLLCSRKAFPH
Trigger: GTGAGGAAATGCCTTTCTGGAGCAAAGGAGGCCCAAAAGAAGTGGGGGATTTGTGACCCTTCCAGGCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590696.1
CDS GCA 72 bp GATGCTCTTTGCTTTATTAATCTAATGCATACCAAGTaGCCCCTCGTCCCTCTCCAAATGGCCCCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: DALCFINLMHTK*PLVPLQMAPGR
Trigger: GCGGCCTGGGGCCATTTGGAGAGGGACGAGGGGGCACTTGGTATGCATTAGATTAATAAAGCAAAGAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590239.5
CDS GCA 72 bp CATGATGCTCAGCACCTTTGCACTTGCTGTTCCTGCTaGCTGGAAGGGTCACAAATCCCCCACTTCTTTTGG +
Preference number: 6 (lower is better)
Translates to: HDAQHLCTCCSC*LEGSQIPHFFW
Trigger: CCAAAAGAAGTGGGGGATTTGTGACCCTTCCAGGCAGCAGGAACAGCAAGTGCAAAGGTGCTGAGCATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590696.1
CDS CCA 72 bp ATCCTGTTCTGCCATGATGCTGTAATCCCAGCTACTTaGAGGCAGGAGAATCACTTGAACCCCCTCGTCCCT +
Preference number: 6 (lower is better)
Translates to: ILFCHDAVIPAT*RQENHLNPLVP
Trigger: AGGGACGAGGGGGTTCAAGTGATTCTCCTGCCTCCAAGTAGCTGGGATTACAGCATCATGGCAGAACAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586993.5