Pregenerated sensors for DDX23 (Homo sapiens)
Ensembl gene IDs: ENSG00000174243Ensembl transcript IDs: ENST00000547135.5, ENST00000547165.5, ENST00000547290.1, ENST00000547842.1, ENST00000549795.5, ENST00000551189.1, ENST00000551331.1, ENST00000552069.1, ENST00000552555.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TACGAAGTTTGCGGAGTCTTGCCCTGGAGCAGGGTGTaGGGAGTAAGTAGAATCAGTGCCCTCCAACTCCTT | + |
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Preference number: 3 (lower is better) Translates to: YEVCGVLPWSRV*GVSRISALQLL Trigger: AAGGAGTTGGAGGGCACTGATTCTACTTACTCCTCACACCCTGCTCCAGGGCAAGACTCCGCAAACTTCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACGAGAGCGAGAACGGCTaGCTCCTCGACGTCTATCCC | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYESENG*LLDVYP Trigger: GGGATAGACGTCGAGGAGGCAGCCGTTCTCGCTCTC...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACGTCAGCCAGCTCTCCTaGCATCACCCTGAGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYVSQLS*HHPESE Trigger: TTCAGACTCAGGGTGATGGCAGGAGAGCTGGCTGAC...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACAAGTTTGCGGAGTCTTaGCCTGGAGCAGGGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYKFAES*PGAGCE Trigger: CTCACACCCTGCTCCAGGGCAAGACTCCGCAAACTT...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR TCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACGTCTCCATAGAAACGTaGCTGCTCTCGCTTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYVSIET*LLSLLL Trigger: CAGCAGAAGCGAGAGCAGTCACGTTTCTATGGAGAC...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR TCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACCCCTGGAGCAGGGTGTaGGGAGTAAGTAGAATCAGT | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYPWSRV*GVSRIS Trigger: ACTGATTCTACTTACTCCTCACACCCTGCTCCAGGG...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACTCCTTGTCCCGTCTGTaGCCATCCTTGTCTCGATCT | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYSLSRL*PSLSRS Trigger: AGATCGAGACAAGGATGGGCACAGACGGGACAAGGA...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACTGCTCTCGCTTCTGCTaGTTGAGGTCAATGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYCSRFC*LRSMPA Trigger: TGCAGGCATTGACCTCAAGCAGCAGAAGCGAGAGCA...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACGACTGCTCTCGCTTCTaGTGCTTGAGGTCAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYDCSRF*CLRSMP Trigger: AGGCATTGACCTCAAGCAGCAGAAGCGAGAGCAGTC...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACCCTTCTTACGAAGTTTaGGGAGTCTTGCCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYPSYEV*GVLPWS Trigger: GCTCCAGGGCAAGACTCCGCAAACTTCGTAAGAAGG...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR TCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACTCGACGTCTATCCCTTaGACGATGCCGCTTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYSTSIP*TMPLSI Trigger: GATAGAAAGCGGCATCGTTCAAGGGATAGACGTCGA...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACCCGTCGTTCTCTTTCTaGAGATTTGGAACGGGAACG | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYPSFSF*RFGTGT Trigger: CGTTCCCGTTCCAAATCTGCAGAAAGAGAACGACGG...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR TCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACCCAGGAGATAAGCTTTaGGGAAAAGGAACAAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYPGDKL*GKGTRS Trigger: GGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGG...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACCGTTCTCGTTCTTTGTaGCGTCGTTCTCTTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYRSRSL*RRSLSA Trigger: TGCAGAAAGAGAACGACGGCACAAAGAACGAGAACG...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACTCACTCTTACTTCAGTaGCTGGATCGTTTACGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYSLLLQ*LDRLRS Trigger: GGACCGTAAACGATCCAGGCACTGAAGTAAGAGTGA...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR CCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACTCCAGGGATAATGGCTaGGCCTTAGGCTTCTTATCA | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYSRDNG*ALGFLS Trigger: TGATAAGAAGCCTAAGGCCCAGCCATTATCCCTGGA...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR CCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACTCTTACTTCAGTGCCTaGATCGTTTACGGTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYSYFSA*IVYGPC Trigger: ACAAGGACCGTAAACGATCCAGGCACTGAAGTAAGA...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR GCA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACCTATCCCTTGAACGATaGCGCTTTCTATCTTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: LDQEISFEEKEQGPHHSYLSLER*RFLSLD Trigger: ATCTAAAGATAGAAAGCGGCATCGTTCAAGGGATAG...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS GCA 90 bp | GGTGGCCGTGAACATGACTGTCTACGAAAACAGGAGGCTCAGCCCTaGACCCAGGCAGGAATAATCATATATCCCACTGTCACCGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: GGREHDCLRKQEAQP*TQAGIIIYPTVTEG Trigger: GCCTTCGGTGACAGTGGGATATATGATTATTCCTGCCTGGGTGCAGGGCTGAGCCTCCTGTTTTCGTAGACAGTCATGTTCACGGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547842.1 ENST00000551331.1 |
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| CDS TCA 90 bp | GCCACCCAGGTAACGCTCCTACCCAGGGACAGAACACAAAGCACATaGGCTTTGAGGCCCAATTCTCACATGCAGAGATCACAATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: ATQVTLLPRDRTQST*ALRPNSHMQRSQWP Trigger: TGGCCATTGTGATCTCTGCATGTGAGAATTGGGCCTCAAAGCTCATGTGCTTTGTGTTCTGTCCCTGGGTAGGAGCGTTACCTGGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547165.5 ENST00000551189.1 |
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| CDS-3UTR CAA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACCCAGCCACCCTAGCCTaGATCACTCACTCCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LDQEISFEEKEQGPHHSYPATLA*ITHSSC Trigger: GCAGGAGGAGTGAGTGATCAAGGCTAGGGTGGCTGG...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS GCA 90 bp | CACCTCACCAGGATGAAGACCCAAGGCAGCTTTGGCTGGCATTACTaGAGCAGACAGGGGGTCCCAGCAATTGATTCCATTCTCTTTATT | + |
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Preference number: 5 (lower is better) Translates to: HLTRMKTQGSFGWHY*SRQGVPAIDSILFI Trigger: AATAAAGAGAATGGAATCAATTGCTGGGACCCCCTGTCTGCTGCAGTAATGCCAGCCAAAGCTGCCTTGGGTCTTCATCCTGGTGAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549795.5 |
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| CDS CCA 90 bp | AGAGCATTTGCTAGCACCTGTGGTCCCGGTAGCAGCATGAGTCTTTaGAATCGTTTTTCCAGGGCTAAGCTAAATGGCTCCACCCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: RAFASTCGPGSSMSL*NRFSRAKLNGSTLR Trigger: CCTAAGGGTGGAGCCATTTAGCTTAGCCCTGGAAAAACGATTCCAAAGACTCATGCTGCTACCGGGACCACAGGTGCTAGCAAATGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551331.1 |
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| CDS-3UTR CAA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACGCATCACGGTCCTTTTaGTCAGCCAGCTCTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LDQEISFEEKEQGPHHSYASRSF*SASSPA Trigger: GGCAGGAGAGCTGGCTGACAAAAAGGACCGTGATGC...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR CAA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACCGTCTGTGCCCATCCTaGTCTCGATCTCGGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: LDQEISFEEKEQGPHHSYRLCPS*SRSRSF Trigger: GAAGGACCGAGATCGAGACAAGGATGGGCACAGACG...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS CCA 90 bp | CTTCGATCCTGTGGTAAACAGGGTGCCCCACAGCTTCGTGAGCTTTaGTTCTTATCCAACCACAAGCCAGAGCAAGACAAAGTCACTCTT | + |
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Preference number: 5 (lower is better) Translates to: LRSCGKQGAPQLREL*FLSNHKPEQDKVTL Trigger: AAGAGTGACTTTGTCTTGCTCTGGCTTGTGGTTGGATAAGAACCAAAGCTCACGAAGCTGTGGGGCACCCTGTTTACCACAGGATCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547290.1 |
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| CDS TCA 90 bp | AACAGTTCTTCCCAGACAGGGTCTTTCTTCCACCAGAGGGCTGGCTaGCTACCAGTCTACCAATTTTCCATCCCAGCTTATCTTACTTCC | + |
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Preference number: 5 (lower is better) Translates to: NSSSQTGSFFHQRAG*LPVYQFSIPAYLTS Trigger: GGAAGTAAGATAAGCTGGGATGGAAAATTGGTAGACTGGTAGTCAGCCAGCCCTCTGGTGGAAGAAAGACCCTGTCTGGGAAGAACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552069.1 |
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| CDS-3UTR CAA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACTCTCGCTTCTGCTGCTaGAGGTCAATGCCTGCAATG | + |
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Preference number: 5 (lower is better) Translates to: LDQEISFEEKEQGPHHSYSRFCC*RSMPAM Trigger: CATTGCAGGCATTGACCTCAAGCAGCAGAAGCGAGA...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR CAA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACACCTGGTGCCGTTCTTaGTACCCAACATCTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LDQEISFEEKEQGPHHSYTWCRS*YPTSSC Trigger: GCAGGAAGATGTTGGGTACAAAGAACGGCACCAGGT...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR CAA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACTCCTTCTTACGAAGTTaGCGGAGTCTTGCCCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LDQEISFEEKEQGPHHSYSFLRS*RSLALE Trigger: CTCCAGGGCAAGACTCCGCAAACTTCGTAAGAAGGA...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS CCA 90 bp | ATGAAACAGTTCTTCCCAGACAGGGTCTTTCTTCCACCAGAGGGCTaGCTGACTACCAGTCTACCAATTTTCCATCCCAGCTTATCTTAC | + |
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Preference number: 5 (lower is better) Translates to: MKQFFPDRVFLPPEG*LTTSLPIFHPSLSY Trigger: GTAAGATAAGCTGGGATGGAAAATTGGTAGACTGGTAGTCAGCCAGCCCTCTGGTGGAAGAAAGACCCTGTCTGGGAAGAACTGTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552069.1 |
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| CDS-3UTR CAA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACCTCGACGTCTATCCCTaGAACGATGCCGCTTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: LDQEISFEEKEQGPHHSYLDVYP*NDAAFY Trigger: ATAGAAAGCGGCATCGTTCAAGGGATAGACGTCGAG...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR CAA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACGCTTTAGAGAGGAACTaGGGCTTAGCCTCAGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LDQEISFEEKEQGPHHSYALERN*GLASAS Trigger: AGAAGCTGAGGCTAAGCCCAAGTTCCTCTCTAAAGC...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS-3UTR CAA 90 bp | CTCGACCAGGAGATAAGCTTTGAGGAAAAGGAACAAGGTCCACATCACTCTTACTCTCGTTCTCGTTCTTaGTGCCGTCGTTCTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: LDQEISFEEKEQGPHHSYSRSRS*CRRSLS Trigger: AGAAAGAGAACGACGGCACAAAGAACGAGAACGAGA...GTAAGAGTGATGTGGACCTTGTTCCTTTTCCTCAAAGCTTATCTCCTGGTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547135.5 |
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| CDS TCA 72 bp | AGCTCTCCTGCCATCGGAGTAGGTTCACAAGGAGGGTaGTGCAGTTCTCCATTGTGTGTGGAACTATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSPAIGVGSQGG*CSSPLCVELSQ Trigger: CTGGGATAGTTCCACACACAATGGAGAACTGCATCACCCTCCTTGTGAACCTACTCCGATGGCAGGAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552555.1 |
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| CDS GCA 72 bp | AGGATGAAGACCCAAGGCAGCTTTGGCTGGCATTACTaGAGCAGACAGGGGGTCCCAGCAATTGATTCCATT | + |
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Preference number: 6 (lower is better) Translates to: RMKTQGSFGWHY*SRQGVPAIDSI Trigger: AATGGAATCAATTGCTGGGACCCCCTGTCTGCTGCAGTAATGCCAGCCAAAGCTGCCTTGGGTCTTCATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549795.5 |
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| CDS CCA 72 bp | GCTAGCACCTGTGGTCCCGGTAGCAGCATGAGTCTTTaGAATCGTTTTTCCAGGGCTAAGCTAAATGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASTCGPGSSMSL*NRFSRAKLNGS Trigger: GGAGCCATTTAGCTTAGCCCTGGAAAAACGATTCCAAAGACTCATGCTGCTACCGGGACCACAGGTGCTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551331.1 |
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| CDS CAA 90 bp | GCAGCTTTGGCTGGCATTACTGCAGCAGACAGGGGGTCCCAGCAATaGATTCCATTCTCTTTATTCCCTCAAACCACCCTTCACCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: AALAGITAADRGSQQ*IPFSLFPQTTLHPG Trigger: ACCAGGGTGAAGGGTGGTTTGAGGGAATAAAGAGAATGGAATCAATTGCTGGGACCCCCTGTCTGCTGCAGTAATGCCAGCCAAAGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549795.5 |
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| CDS TCA 72 bp | TCCCAGACAGGGTCTTTCTTCCACCAGAGGGCTGGCTaGCTACCAGTCTACCAATTTTCCATCCCAGCTTAT | + |
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Preference number: 6 (lower is better) Translates to: SQTGSFFHQRAG*LPVYQFSIPAY Trigger: ATAAGCTGGGATGGAAAATTGGTAGACTGGTAGTCAGCCAGCCCTCTGGTGGAAGAAAGACCCTGTCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552069.1 |
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| CDS CCA 72 bp | TGTGGTAAACAGGGTGCCCCACAGCTTCGTGAGCTTTaGTTCTTATCCAACCACAAGCCAGAGCAAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: CGKQGAPQLREL*FLSNHKPEQDK Trigger: TTTGTCTTGCTCTGGCTTGTGGTTGGATAAGAACCAAAGCTCACGAAGCTGTGGGGCACCCTGTTTACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547290.1 |
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| CDS TCA 72 bp | GCTTTGATAGCCACCACCTTAGAAAATAGTGTCCTCTaGATTCCCATCCTTCCTGAGTACCTGCTCATCAAG | + |
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Preference number: 6 (lower is better) Translates to: ALIATTLENSVL*IPILPEYLLIK Trigger: CTTGATGAGCAGGTACTCAGGAAGGATGGGAATTCAGAGGACACTATTTTCTAAGGTGGTGGCTATCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547842.1 ENST00000551331.1 |
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| CDS GCA 72 bp | ATAGTGTCCTCTGAATTCCCATCCTTCCTGAGTACCTaGTCATCAAGGCACTTTCCATCTTATGATGACAGG | + |
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Preference number: 6 (lower is better) Translates to: IVSSEFPSFLST*SSRHFPSYDDR Trigger: CCTGTCATCATAAGATGGAAAGTGCCTTGATGAGCAGGTACTCAGGAAGGATGGGAATTCAGAGGACACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547842.1 ENST00000551331.1 |
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