RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDX21 (Homo sapiens)

Ensembl gene IDs: ENSG00000165732

Ensembl transcript IDs: ENST00000354185.9, ENST00000620315.1

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACCATTTAAGCACCATTTATCCAGCCTACTTACAAATAAAGCTATaGAGCCACCTTATACATGTGAAATTCCTTAAAACCCTGGCTTTC +
Preference number: 1 (lower is better)
Translates to: YHLSTIYPAYLQIKL*SHLIHVKFLKTLAF
Trigger: GAAAGCCAGGGTTTTAAGGAATTTCACATGTATAAGGTGGCTCCATAGCTTTATTTGTAAGTAGGCTGGATAAATGGTGCTTAAATGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTTGTTCGGCAGGTGGCTaGGGAAACCTTAACTTCCAA +
Preference number: 2 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTCSAGG*GNLNFQ
Trigger: TTGGAAGTTAAGGTTTCCTCAGCCACCTGCCGAACA...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR CCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCAGGGACTTGGCAAGTaGTCAAAAGGAGGCACAATG +
Preference number: 2 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFQGLGK*SKGGTM
Trigger: CATTGTGCCTCCTTTTGACCACTTGCCAAGTCCCTG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR CCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTAAAGAGACAGGGACTTaGCAAGTGGTCAAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTKETGT*QVVKRR
Trigger: CCTCCTTTTGACCACTTGCCAAGTCCCTGTCTCTTT...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR TCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCAAGCTTGTCTGTGTCTaGAAGAGACAGGGACTTGGC +
Preference number: 2 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLKLVCV*KRQGLG
Trigger: GCCAAGTCCCTGTCTCTTTCAGACACAGACAAGCTT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR TCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTGTTCGGCAGGTGGCTaGGGAAACCTTAACTTCCAA +
Preference number: 2 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLCSAGG*GNLNFQ
Trigger: TTGGAAGTTAAGGTTTCCTCAGCCACCTGCCGAACA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR TCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTAATAATAGGACCACATaGGAAACTGTTCGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFNNRTT*ETVRQV
Trigger: CACCTGCCGAACAGTTTCTCATGTGGTCCTATTATT...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR GCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCTAAAAACCCCAGCTTaGCCACTTGAAGTTAACCTC +
Preference number: 2 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFLKTPA*PLEVNL
Trigger: GAGGTTAACTTCAAGTGGGCAAGCTGGGGTTTTTAG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR CCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCCAGGGACTTGGCAAGTaGTCAAAAGGAGGCACAATG +
Preference number: 2 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFQGLGK*SKGGTM
Trigger: CATTGTGCCTCCTTTTGACCACTTGCCAAGTCCCTG...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR CCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCAAAGAGACAGGGACTTaGCAAGTGGTCAAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFKETGT*QVVKRR
Trigger: CCTCCTTTTGACCACTTGCCAAGTCCCTGTCTCTTT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR TCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCAATAATAGGACCACATaGGAAACTGTTCGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLNNRTT*ETVRQV
Trigger: CACCTGCCGAACAGTTTCTCATGTGGTCCTATTATT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR GCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCCTAAAAACCCCAGCTTaGCCACTTGAAGTTAACCTC +
Preference number: 2 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLLKTPA*PLEVNL
Trigger: GAGGTTAACTTCAAGTGGGCAAGCTGGGGTTTTTAG...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTCCAATAGGAAGAAGTaGAGTACATTACCATTTAAG +
Preference number: 2 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLSNRKK*STLPFK
Trigger: CTTAAATGGTAATGTACTCCACTTCTTCCTATTGGA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCCCCAGCTTGCCCACTaGAAGTTAACCTCTAGAAAC +
Preference number: 3 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFPQLAH*KLTSRN
Trigger: GTTTCTAGAGGTTAACTTCAAGTGGGCAAGCTGGGG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR CCA 72 bp AATGAAGCTTGTCTGTGTCTGAAAGAGACAGGGACTTaGCAAGTGGTCAAAAGGAGGCACAATGTGCTTTTA +
Preference number: 3 (lower is better)
Translates to: NEACLCLKETGT*QVVKRRHNVLL
Trigger: TAAAAGCACATTGTGCCTCCTTTTGACCACTTGCCAAGTCCCTGTCTCTTTCAGACACAGACAAGCTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR-3UTR CAA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCCCCCAGCTTGCCCACTaGAAGTTAACCTCTAGAAAC +
Preference number: 3 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLPQLAH*KLTSRN
Trigger: GTTTCTAGAGGTTAACTTCAAGTGGGCAAGCTGGGG...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
3UTR CCA 72 bp AGCACCATTTATCCAGCCTACTTACAAATAAAGCTATaGAGCCACCTTATACATGTGAAATTCCTTAAAACC +
Preference number: 3 (lower is better)
Translates to: STIYPAYLQIKL*SHLIHVKFLKT
Trigger: GGTTTTAAGGAATTTCACATGTATAAGGTGGCTCCATAGCTTTATTTGTAAGTAGGCTGGATAAATGGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCGGAGCGCACCACTCCTaGGCGACCGCCCGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAGAHHS*ATARQD
Trigger: GTCTTGGCGGGCGGTCGCCCAGGAGTGGTGCGCTCC...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS-3UTR CCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCAGCGCACGGCGGACCTaGCTCGGTCGGGCAAACGAC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPASARRT*LGRAND
Trigger: GTCGTTTGCCCGACCGAGCCAGGTCCGCCGTGCGCT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS-3UTR CCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTCGCCGGGGACCACGTaGGACACCCGGCCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFSPGTT*DTRPSP
Trigger: GGGAGAGGGCCGGGTGTCCCACGTGGTCCCCGGCGA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS-3UTR GCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCCGTCCTTCCAGCTCTaGCTGTCCGCCCGGATCGAT +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTPSFQL*LSARID
Trigger: ATCGATCCGGGCGGACAGGCAGAGCTGGAAGGACGG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTGCAAGAACCAGTACCTaGGGGGCACGGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTARTST*GARPLF
Trigger: GAAGAGAGGCCGTGCCCCTCAGGTACTGGTTCTTGC...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCACTCTGCGCACTGTGTaGGGCGCGCCCAAGTCGCCG +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFTLRTV*GAPKSP
Trigger: CGGCGACTTGGGCGCGCCTCACACAGTGCGCAGAGT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS-3UTR GCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTATCTTCAGCGCAGGTTaGCCAGGCCGACCGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTIFSAG*PGRPVF
Trigger: GAAGACCGGTCGGCCTGGGCAACCTGCGCTGAAGAT...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354185.9
CDS-3UTR GCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCCCGTCCTTCCAGCTCTaGCTGTCCGCCCGGATCGAT +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAPSFQL*LSARID
Trigger: ATCGATCCGGGCGGACAGGCAGAGCTGGAAGGACGG...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCGCAAGAACCAGTACCTaGGGGGCACGGCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAARTST*GARPLF
Trigger: GAAGAGAGGCCGTGCCCCTCAGGTACTGGTTCTTGC...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCTTTGTTGCCACCTCCTaGTCGCTGTCCTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAFVATS*SLSSRA
Trigger: GGCCCGAGAGGACAGCGATCAGGAGGTGGCAACAAA...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTATGGGCCAGTGCTGCTaGCAGAGCTTCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFMGQCC*QSFHSS
Trigger: GGAGCTGTGGAAGCTCTGGCAGCAGCACTGGCCCAT...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCAAACGACGCGTCCACTaGCCGGGGAGCGCACCACTC +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFKRRVH*PGSAPL
Trigger: GAGTGGTGCGCTCCCCGGGCAGTGGACGCGTCGTTT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS-3UTR GCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCTGAAGGTCCAACTCTaGGCACTGTGTGAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFLKVQL*ALCEAR
Trigger: GCGCGCCTCACACAGTGCGCAGAGTTGGACCTTCAG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS-3UTR TCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTTACGGACGTGGCACCTaGAATATGGGCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFYGRGT*NMGQCC
Trigger: GCAGCACTGGCCCATATTTCAGGTGCCACGTCCGTA...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCTTCCCGCTGTCCTCTaGATCTTCTGTTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTLPAVL*IFCFRP
Trigger: GGGACGGAAACAGAAGATTCAGAGGACAGCGGGAAG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCAACGTGGAGCCTGACTaGAGGTCCAACTCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPANVEPD*RSNSAH
Trigger: GTGCGCAGAGTTGGACCTTCAGTCAGGCTCCACGTT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCAACAACGTGGAGCCTaGCTGAAGGTCCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTQQRGA*LKVQLC
Trigger: GCAGAGTTGGACCTTCAGTCAGGCTCCACGTTGTTG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS-3UTR GCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCGTGGCCACAGAGAGCTaGCAGCGTCGTGAATCATGC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAVATES*QRRESC
Trigger: GCATGATTCACGACGCTGGCAGCTCTCTGTGGCCAC...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCCTTCGCGCACGCTCATaGCGGGAGTTCTGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPALRARS*REFCLS
Trigger: GCTAAGACAGAACTCCCGGCATGAGCGTGCGCGAAG...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS-3UTR CCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTGCTGGTCTACGGACGTaGCACCTGAAATATGGGCCA +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTAGLRT*HLKYGP
Trigger: TGGCCCATATTTCAGGTGCCACGTCCGTAGACCAGC...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTTTGATCAAGGAGCGCTaGTCTACGGACGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTLIKER*STDVAP
Trigger: AGGTGCCACGTCCGTAGACCAGCGCTCCTTGATCAA...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCGAGCTGCCAGCGTCGTaGATCATGCCATTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAELPAS*IMPFLL
Trigger: CAGGAGAAATGGCATGATTCACGACGCTGGCAGCTC...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCTTCCCGCTGTCCTCTaGATCTTCTGTTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFLPAVL*IFCFRP
Trigger: GGGACGGAAACAGAAGATTCAGAGGACAGCGGGAAG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTTTGTTGCCACCTCCTaGTCGCTGTCCTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFFVATS*SLSSRA
Trigger: GGCCCGAGAGGACAGCGATCAGGAGGTGGCAACAAA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTGACATCCCCAATAACTaGTGCCCTCTGAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTDIPNN*CPLSPV
Trigger: CACTGGACTCAGAGGGCAGCAGTTATTGGGGATGTC...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCATGGGCCAGTGCTGCTaGCAGAGCTTCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLMGQCC*QSFHSS
Trigger: GGAGCTGTGGAAGCTCTGGCAGCAGCACTGGCCCAT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCAATATGGGCCAGTGCTaGTGCCAGAGCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPANMGQC*CQSFHS
Trigger: GCTGTGGAAGCTCTGGCAGCAGCACTGGCCCATATT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCCACTGGCAGCTTCACTaGGGTTACAGTCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAHWQLH*GYSPVQ
Trigger: CTGAACCGGACTGTAACCCCAGTGAAGCTGCCAGTG...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTGGCACCTGAAATATaGGCCAGTGCTGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFVAPEI*ASAAAR
Trigger: TCTGGCAGCAGCACTGGCCCATATTTCAGGTGCCAC...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCGCTGGTCTACGGACGTaGCACCTGAAATATGGGCCA +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAAGLRT*HLKYGP
Trigger: TGGCCCATATTTCAGGTGCCACGTCCGTAGACCAGC...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTGCTGATTGTTTGAAGTaGCTAATGGCAGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTADCLK*LMAVGG
Trigger: GCCTCCCACTGCCATTAGTCACTTCAAACAATCAGC...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTACGGACGTGGCACCTaGAATATGGGCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFYGRGT*NMGQCC
Trigger: GCAGCACTGGCCCATATTTCAGGTGCCACGTCCGTA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGACATCCCCAATAACTaGTGCCCTCTGAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFDIPNN*CPLSPV
Trigger: CACTGGACTCAGAGGGCAGCAGTTATTGGGGATGTC...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGCTGATAAAAGCAGATaGACACCCCCGTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFADKSR*TPPSFQ
Trigger: CTGGAAGGACGGGGGTGTGCATCTGCTTTTATCAGC...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCGTGGCCACAGAGAGCTaGCAGCGTCGTGAATCATGC +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFVATES*QRRESC
Trigger: GCATGATTCACGACGCTGGCAGCTCTCTGTGGCCAC...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCGTTCTGGTTGCTCTGTaGCCACAGAGAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLVLVAL*PQRAAS
Trigger: GCTGGCAGCTCTCTGTGGCCACAGAGCAACCAGAAC...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTAATCAGGCAGTTATCTaGCCAGGGGCTACATCAGGT +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTNQAVI*PGATSG
Trigger: ACCTGATGTAGCCCCTGGCCAGATAACTGCCTGATT...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCAGTCCGGTTCAGGATaGGGAAATCCATTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTQSGSG*GNPFFS
Trigger: ACTGAAGAATGGATTTCCTCATCCTGAACCGGACTG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTATAACTGCTGCCCTCTaGGTCCAGTGGCACTTAATA +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTITAAL*VQWHLI
Trigger: TATTAAGTGCCACTGGACTCAGAGGGCAGCAGTTAT...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCCGGAATCCAAAAGCCTaGTGGCATCTTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPARNPKA*WHLCWK
Trigger: CTTCCAGCAAAGATGCCATCAGGCTTTTGGATTCCG...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCGCTGATTGTTTGAAGTaGCTAATGGCAGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAADCLK*LMAVGG
Trigger: GCCTCCCACTGCCATTAGTCACTTCAAACAATCAGC...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTAACCCACATTTGAGTTaGTCAAGGAGCGCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTNPHLS*SRSAGL
Trigger: TAGACCAGCGCTCCTTGATCAACTCAAATGTGGGTT...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCACAAAACCCACATTTaGGTTGATCAAGGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTHKTHI*VDQGAL
Trigger: CAGCGCTCCTTGATCAACTCAAATGTGGGTTTTGTG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCGAGCTGCCAGCGTCGTaGATCATGCCATTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFELPAS*IMPFLL
Trigger: CAGGAGAAATGGCATGATTCACGACGCTGGCAGCTC...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTGACCAAATGCTTTACTaGAACTCCGCTTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTDQMLY*NSASGL
Trigger: AAGGCCAGAAGCGGAGTTTCAGTAAAGCATTTGGTC...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTTGTTCGGCAGGTGGCTaGGGAAACCTTAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFCSAGG*GNLNFQ
Trigger: TTGGAAGTTAAGGTTTCCTCAGCCACCTGCCGAACA...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCAATATGGGCCAGTGCTaGTGCCAGAGCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLNMGQC*CQSFHS
Trigger: GCTGTGGAAGCTCTGGCAGCAGCACTGGCCCATATT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCCCTTCCAGTTCTGGTTaGTCTGTGGCCACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLPSSSG*SVATES
Trigger: GCTCTCTGTGGCCACAGAGCAACCAGAACTGGAAGG...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCCACTGGCAGCTTCACTaGGGTTACAGTCCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFHWQLH*GYSPVQ
Trigger: CTGAACCGGACTGTAACCCCAGTGAAGCTGCCAGTG...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTTGATCAAGGAGCGCTaGTCTACGGACGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLLIKER*STDVAP
Trigger: AGGTGCCACGTCCGTAGACCAGCGCTCCTTGATCAA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTTCCATATCCTTCCCGTaGTCCTTCCAGTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFSISFP*SFQFWL
Trigger: CAACCAGAACTGGAAGGACCACGGGAAGGATATGGA...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCTGAAACTCCGCTTCTaGCCTTTGTTTTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTLKLRF*PLFWDL
Trigger: CAGATCCCAAAACAAAGGCCAGAAGCGGAGTTTCAG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCTTTCATTGCGGTGTCTaGTTCCAAACCAGCGTCACT +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAFHCGV*FQTSVT
Trigger: AGTGACGCTGGTTTGGAATCAGACACCGCAATGAAA...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354185.9
CDS-3UTR TCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCAGTCCGGTTCAGGATaGGGAAATCCATTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFQSGSG*GNPFFS
Trigger: ACTGAAGAATGGATTTCCTCATCCTGAACCGGACTG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTTCTTGCAGTTCCCCATaGAGTTTCTCAATCAAAGGG +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTSCSSP*SFSIKG
Trigger: CCCTTTGATTGAGAAACTTCATGGGGAACTGCAAGA...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTATCCTGCTTTATAGCTaGATTCTGGGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFILLYS*ILGQLL
Trigger: CAGGAGCTGTCCCAGAATTCAGCTATAAAGCAGGAT...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCATCCTGCTTTATAGCTaGATTCTGGGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAILLYS*ILGQLL
Trigger: CAGGAGCTGTCCCAGAATTCAGCTATAAAGCAGGAT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTAACCCACATTTGAGTTaGTCAAGGAGCGCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFNPHLS*SRSAGL
Trigger: TAGACCAGCGCTCCTTGATCAACTCAAATGTGGGTT...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCACAAAACCCACATTTaGGTTGATCAAGGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFHKTHI*VDQGAL
Trigger: CAGCGCTCCTTGATCAACTCAAATGTGGGTTTTGTG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCACCCAGCTTTCCTTTaGGAAAAACCATTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTHPAFL*EKPFPS
Trigger: TGAAGGGAATGGTTTTTCTCAAAGGAAAGCTGGGTG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCAACTCTCTTGTAGGTaGAAGAACCAGTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFQLSCR*KNQYLR
Trigger: CCTCAGGTACTGGTTCTTGCACCTACAAGAGAGTTG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCGCTGATAAAAGCAGATaGACACCCCCGTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFADKSR*TPPSFQ
Trigger: CTGGAAGGACGGGGGTGTGCATCTGCTTTTATCAGC...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTATCTCCTCGCCCAGCTaGTCTTTAAGTTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTISSPS*SLSSFQ
Trigger: TTGGAAAGAACTTAAAGAGCAGCTGGGCGAGGAGAT...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCTAAAAACCCCAGCTTaGCCACTTGAAGTTAACCTC +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTLKTPA*PLEVNL
Trigger: GAGGTTAACTTCAAGTGGGCAAGCTGGGGTTTTTAG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTTTTATAGCTGAATTCTaGGACAGCTCCTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTFIAEF*DSSWAS
Trigger: AGAAGCCCAGGAGCTGTCCCAGAATTCAGCTATAAA...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTTTCCCTTTGCTTCTGTaGAATGTCTCCATGCAAGGA +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTFPLLL*NVSMQG
Trigger: TCCTTGCATGGAGACATTCCACAGAAGCAAAGGGAA...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCCCATTCCCTTCACTTTaGAATCAATCTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAPFPSL*NQSPRP
Trigger: TGGGCGAGGAGATTGATTCCAAAGTGAAGGGAATGG...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTTCTGTATGTGGTCTTTaGTACGACCTGGTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFSVCGL*YDLVFQ
Trigger: TTGGAACACCAGGTCGTATCAAAGACCACATACAGA...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCCGGAATCCAAAAGCCTaGTGGCATCTTTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFRNPKA*WHLCWK
Trigger: CTTCCAGCAAAGATGCCATCAGGCTTTTGGATTCCG...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCAAGCTTGTCTGTGTCTaGAAGAGACAGGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFKLVCV*KRQGLG
Trigger: GCCAAGTCCCTGTCTCTTTCAGACACAGACAAGCTT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTGTTCGGCAGGTGGCTaGGGAAACCTTAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFCSAGG*GNLNFQ
Trigger: TTGGAAGTTAAGGTTTCCTCAGCCACCTGCCGAACA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTCTTTCTCCTCGGTTTaGTTTCGCAGTGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLSFSSV*FRSVSP
Trigger: AGGGGAGACACTGCGAAAGCAAACCGAGGAGAAAGA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354185.9
CDS-3UTR GCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCAATCCCATTCCTCATaGGTTCAAATTGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTQSHSS*VQIDLH
Trigger: ATGGAGGTCAATTTGAACGCATGAGGAATGGGATTG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCACTTAATAGCCAGATaGTCCACAGTTATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTHLIAR*STVIAV
Trigger: AACGGCAATAACTGTGGAGCATCTGGCTATTAAGTG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCAGGGTGATTTCCCTTTaGTTCTGTGGAATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPARVISL*FCGMSP
Trigger: TGGAGACATTCCACAGAAGCAAAGGGAAATCACCCT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCATCTCCTCGCCCAGCTaGTCTTTAAGTTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAISSPS*SLSSFQ
Trigger: TTGGAAAGAACTTAAAGAGCAGCTGGGCGAGGAGAT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCAGCGTCGTGAATCATaGCATTTCTCCTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTQRRES*HFSCIS
Trigger: AGAAATACAGGAGAAATGGCATGATTCACGACGCTG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCATCTGTTACTTTTGTTaGCACCTCCTGATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAICYFC*HLLIAV
Trigger: GACAGCGATCAGGAGGTGGCAACAAAAGTAACAGAT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTATCTGTTACTTTTGTTaGCACCTCCTGATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFICYFC*HLLIAV
Trigger: GACAGCGATCAGGAGGTGGCAACAAAAGTAACAGAT...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCTGTTACTTTCTTCACTaGCAGCTTCACTGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPACYFLH*QLHWGY
Trigger: GTAACCCCAGTGAAGCTGCCAGTGAAGAAAGTAACA...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTCCATATCCTTCCCGTaGTCCTTCCAGTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFSISFP*SFQFWL
Trigger: CAACCAGAACTGGAAGGACCACGGGAAGGATATGGA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCAATCAGGCAGTTATCTaGCCAGGGGCTACATCAGGT +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLNQAVI*PGATSG
Trigger: ACCTGATGTAGCCCCTGGCCAGATAACTGCCTGATT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCCAGAGTTCCGACCTGTaGATGCCTATAAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFQSSDL*MPISSE
Trigger: CTCTGAGCTTATAGGCATCCACAGGTCGGAACTCTG...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS-3UTR TCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTGTTATTGCCGTTTTCTaGGTCTTTTTACCAATCAGG +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTVIAVF*VFLPIR
Trigger: CCTGATTGGTAAAAAGACTCAGAAAACGGCAATAAC...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCATAACTGCTGCCCTCTaGGTCCAGTGGCACTTAATA +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFITAAL*VQWHLI
Trigger: TATTAAGTGCCACTGGACTCAGAGGGCAGCAGTTAT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTCTCCATGCAAGGACTaGGCATCCTGCTTTATAGCT +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFSPCKD*ASCFIA
Trigger: AGCTATAAAGCAGGATGCTCAGTCCTTGCATGGAGA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTCTCCATGCAAGGACTaGGCATCCTGCTTTATAGCT +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLSPCKD*ASCFIA
Trigger: AGCTATAAAGCAGGATGCTCAGTCCTTGCATGGAGA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCGACCAAATGCTTTACTaGAACTCCGCTTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFDQMLY*NSASGL
Trigger: AAGGCCAGAAGCGGAGTTTCAGTAAAGCATTTGGTC...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTTCATCCAGGACAACATaGTTAAGTTTGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTSSRTT*LSLVRS
Trigger: AGATCTCACCAAACTTAAGCATGTTGTCCTGGATGA...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCTGCAGCAACATTGGTTaGCACCAAAACTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPACSNIG*HQNSKT
Trigger: AGTTTTGGAGTTTTGGTGGCAACCAATGTTGCTGCA...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCCCCATATCCAACATCTaGTCCACTTCATCCAGGACA +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLPISNI*STSSRT
Trigger: TGTCCTGGATGAAGTGGACCAGATGTTGGATATGGG...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTAGCACTGCAAGATCATaGTCACAAAACCCACATTTG +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFSTARS*SQNPHL
Trigger: CAAATGTGGGTTTTGTGACCATGATCTTGCAGTGCT...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCCCATTCCCTTCACTTTaGAATCAATCTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLPFPSL*NQSPRP
Trigger: TGGGCGAGGAGATTGATTCCAAAGTGAAGGGAATGG...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCCTGAAACTCCGCTTCTaGCCTTTGTTTTGGGATCTG +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLLKLRF*PLFWDL
Trigger: CAGATCCCAAAACAAAGGCCAGAAGCGGAGTTTCAG...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCAAAGAGACAGGGACTTaGCAAGTGGTCAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLKETGT*QVVKRR
Trigger: CCTCCTTTTGACCACTTGCCAAGTCCCTGTCTCTTT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTCTTGCAGTTCCCCATaGAGTTTCTCAATCAAAGGG +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFSCSSP*SFSIKG
Trigger: CCCTTTGATTGAGAAACTTCATGGGGAACTGCAAGA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTCTGTATGTGGTCTTTaGTACGACCTGGTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLSVCGL*YDLVFQ
Trigger: TTGGAACACCAGGTCGTATCAAAGACCACATACAGA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCCACCCAGCTTTCCTTTaGGAAAAACCATTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFHPAFL*EKPFPS
Trigger: TGAAGGGAATGGTTTTTCTCAAAGGAAAGCTGGGTG...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCTCCACAGGTATTTCCTaGTCTATCTCACTGTTACTT +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPASTGIS*SISLLL
Trigger: AAGTAACAGTGAGATAGAGCAGGAAATACCTGTGGA...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTTCATCCAGGACAACATaGTTAAGTTTGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFSSRTT*LSLVRS
Trigger: AGATCTCACCAAACTTAAGCATGTTGTCCTGGATGA...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCAGGGTGATTTCCCTTTaGTTCTGTGGAATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLRVISL*FCGMSP
Trigger: TGGAGACATTCCACAGAAGCAAAGGGAAATCACCCT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTGTTACTTTCTTCACTaGCAGCTTCACTGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFCYFLH*QLHWGY
Trigger: GTAACCCCAGTGAAGCTGCCAGTGAAGAAAGTAACA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTTTATAGCTGAATTCTaGGACAGCTCCTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLFIAEF*DSSWAS
Trigger: AGAAGCCCAGGAGCTGTCCCAGAATTCAGCTATAAA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTTCCCTTTGCTTCTGTaGAATGTCTCCATGCAAGGA +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFFPLLL*NVSMQG
Trigger: TCCTTGCATGGAGACATTCCACAGAAGCAAAGGGAA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCTCTACATCCTTTGGTaGAGAGCTTTGTATAACCAA +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFLYILW*RALYNQ
Trigger: TTGGTTATACAAAGCTCTCCACCAAAGGATGTAGAG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCAAGTCTTTGCTTACTTaGTTTGCCAACTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAKSLLT*FANSLV
Trigger: TACAAGAGAGTTGGCAAATCAAGTAAGCAAAGACTT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTTATCAGCTTCTCAGCTaGTTGTTTGAAGTGACTAAT +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFYQLLS*LFEVTN
Trigger: ATTAGTCACTTCAAACAATCAGCTGAGAAGCTGATA...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCCAATCCCATTCCTCATaGGTTCAAATTGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFQSHSS*VQIDLH
Trigger: ATGGAGGTCAATTTGAACGCATGAGGAATGGGATTG...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCCACTTAATAGCCAGATaGTCCACAGTTATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLHLIAR*STVIAV
Trigger: AACGGCAATAACTGTGGAGCATCTGGCTATTAAGTG...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTGCAGCAACATTGGTTaGCACCAAAACTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLCSNIG*HQNSKT
Trigger: AGTTTTGGAGTTTTGGTGGCAACCAATGTTGCTGCA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCCAGCGTCGTGAATCATaGCATTTCTCCTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFQRRES*HFSCIS
Trigger: AGAAATACAGGAGAAATGGCATGATTCACGACGCTG...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCGGACTCTACATCCTTTaGTGGAGAGCTTTGTATAAC +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFGLYIL*WRALYN
Trigger: GTTATACAAAGCTCTCCACCAAAGGATGTAGAGTCC...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTTTCTGGCCTTTGTTTTaGGATCTGTTACTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFFWPLF*DLLLLL
Trigger: CAACAAAAGTAACAGATCCCAAAACAAAGGCCAGAA...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTTCCAATAGGAAGAAGTaGAGTACATTACCATTTAAG +
Preference number: 4 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTSNRKK*STLPFK
Trigger: CTTAAATGGTAATGTACTCCACTTCTTCCTATTGGA...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCAAAATCTCTTCCACTTaGTCAGCAAATCCCATATCC +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLKISST*SANPIS
Trigger: GGATATGGGATTTGCTGATCAAGTGGAAGAGATTTT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCATTTGGCATTTCAATTaGGCACTGCAAGATCATGGT +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLIWHFN*ALQDHG
Trigger: ACCATGATCTTGCAGTGCTCAATTGAAATGCCAAAT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCATTTGGCATTTCAATTaGGCACTGCAAGATCATGGT +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFIWHFN*ALQDHG
Trigger: ACCATGATCTTGCAGTGCTCAATTGAAATGCCAAAT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCCTGTATTTCTGTTACTaGTGCGGTAGGTACATCAAA +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFLYFCY*CGRYIK
Trigger: TTTGATGTACCTACCGCATCAGTAACAGAAATACAG...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTCCACAGGTATTTCCTaGTCTATCTCACTGTTACTT +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLSTGIS*SISLLL
Trigger: AAGTAACAGTGAGATAGAGCAGGAAATACCTGTGGA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCATTTCAATTGAGCACTaGAAGATCATGGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAISIEH*KIMVTK
Trigger: TTTTGTGACCATGATCTTGCAGTGCTCAATTGAAAT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCCTCTACATCCTTTGGTaGAGAGCTTTGTATAACCAA +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLLYILW*RALYNQ
Trigger: TTGGTTATACAAAGCTCTCCACCAAAGGATGTAGAG...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCAAGTCTTTGCTTACTTaGTTTGCCAACTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFKSLLT*FANSLV
Trigger: TACAAGAGAGTTGGCAAATCAAGTAAGCAAAGACTT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR TCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTATCAGCTTCTCAGCTaGTTGTTTGAAGTGACTAAT +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFYQLLS*LFEVTN
Trigger: ATTAGTCACTTCAAACAATCAGCTGAGAAGCTGATA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCATGCTCCACAGTTATTaGCGTTTTCTGAGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLMLHSY*RFLSLF
Trigger: AAAAAGACTCAGAAAACGGCAATAACTGTGGAGCAT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCATGCTCCACAGTTATTaGCGTTTTCTGAGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFMLHSY*RFLSLF
Trigger: AAAAAGACTCAGAAAACGGCAATAACTGTGGAGCAT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTTCTGGCCTTTGTTTTaGGATCTGTTACTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLFWPLF*DLLLLL
Trigger: CAACAAAAGTAACAGATCCCAAAACAAAGGCCAGAA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR GCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCATTTCAATTGAGCACTaGAAGATCATGGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFISIEH*KIMVTK
Trigger: TTTTGTGACCATGATCTTGCAGTGCTCAATTGAAAT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CCA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTCCAATAGGAAGAAGTaGAGTACATTACCATTTAAG +
Preference number: 4 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFSNRKK*STLPFK
Trigger: CTTAAATGGTAATGTACTCCACTTCTTCCTATTGGA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS GCA 90 bp CAGCGCACGGCGGACCTGGCTCGGTCGGGCAAACGACGCGTCCACTaGCCGGGGAGCGCACCACTCCTGGGCGACCGCCCGCCAAGACCC +
Preference number: 5 (lower is better)
Translates to: QRTADLARSGKRRVH*PGSAPLLGDRPPRP
Trigger: GGGTCTTGGCGGGCGGTCGCCCAGGAGTGGTGCGCTCCCCGGGCAGTGGACGCGTCGTTTGCCCGACCGAGCCAGGTCCGCCGTGCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS TCA 90 bp CCAACAACGTGGAGCCTGACTGAAGGTCCAACTCTGCGCACTGTGTaGGGCGCGCCCAAGTCGCCGGGGACCACGTGGGACACCCGGCCC +
Preference number: 5 (lower is better)
Translates to: PTTWSLTEGPTLRTV*GAPKSPGTTWDTRP
Trigger: GGGCCGGGTGTCCCACGTGGTCCCCGGCGACTTGGGCGCGCCTCACACAGTGCGCAGAGTTGGACCTTCAGTCAGGCTCCACGTTGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS CCA 90 bp TGGATGCCTATAAGCTCAGAGGAAGAGGTCAGCGCACGGCGGACCTaGCTCGGTCGGGCAAACGACGCGTCCACTGCCCGGGGAGCGCAC +
Preference number: 5 (lower is better)
Translates to: WMPISSEEEVSARRT*LGRANDASTARGAH
Trigger: GTGCGCTCCCCGGGCAGTGGACGCGTCGTTTGCCCGACCGAGCCAGGTCCGCCGTGCGCTGACCTCTTCCTCTGAGCTTATAGGCATCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS TCA 90 bp GCTCATGCCGGGAGTTCTGTCTTAGCCAACAACGTGGAGCCTGACTaGAGGTCCAACTCTGCGCACTGTGTGAGGCGCGCCCAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: AHAGSSVLANNVEPD*RSNSAHCVRRAQVA
Trigger: GGCGACTTGGGCGCGCCTCACACAGTGCGCAGAGTTGGACCTTCAGTCAGGCTCCACGTTGTTGGCTAAGACAGAACTCCCGGCATGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS CCA 90 bp CTCTCCCGAGCTCCAACAGGGCCTCTCTACCAGAGTTCCGACCTGTaGATGCCTATAAGCTCAGAGGAAGAGGTCAGCGCACGGCGGACC +
Preference number: 5 (lower is better)
Translates to: LSRAPTGPLYQSSDL*MPISSEEEVSARRT
Trigger: GGTCCGCCGTGCGCTGACCTCTTCCTCTGAGCTTATAGGCATCCACAGGTCGGAACTCTGGTAGAGAGGCCCTGTTGGAGCTCGGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS TCA 90 bp GCACGCTCATGCCGGGAGTTCTGTCTTAGCCAACAACGTGGAGCCTaGCTGAAGGTCCAACTCTGCGCACTGTGTGAGGCGCGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: ARSCREFCLSQQRGA*LKVQLCALCEARPS
Trigger: ACTTGGGCGCGCCTCACACAGTGCGCAGAGTTGGACCTTCAGTCAGGCTCCACGTTGTTGGCTAAGACAGAACTCCCGGCATGAGCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS GCA 90 bp CCCCTGAAGCCTCCATATCCTTCCCGTGGTCCTTCCAGTTCTGGTTaGTCTGTGGCCACAGAGAGCTGCCAGCGTCGTGAATCATGCCAT +
Preference number: 5 (lower is better)
Translates to: PLKPPYPSRGPSSSG*SVATESCQRRESCH
Trigger: ATGGCATGATTCACGACGCTGGCAGCTCTCTGTGGCCACAGAGCAACCAGAACTGGAAGGACCACGGGAAGGATATGGAGGCTTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CCA 90 bp GAGTTGATCAAGGAGCGCTGGTCTACGGACGTGGCACCTGAAATATaGGCCAGTGCTGCTGCCAGAGCTTCCACAGCTCCCTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ELIKERWSTDVAPEI*ASAAARASTAPFSS
Trigger: AGAGGAGAAGGGAGCTGTGGAAGCTCTGGCAGCAGCACTGGCCCATATTTCAGGTGCCACGTCCGTAGACCAGCGCTCCTTGATCAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS GCA 90 bp CCTTGTGCTGATAAAAGCAGATGCACACCCCCGTCCTTCCAGCTCTaGCTGTCCGCCCGGATCGATGAATGTAGGACTCTACATCCTTTG +
Preference number: 5 (lower is better)
Translates to: PCADKSRCTPPSFQL*LSARIDECRTLHPL
Trigger: CAAAGGATGTAGAGTCCTACATTCATCGATCCGGGCGGACAGGCAGAGCTGGAAGGACGGGGGTGTGCATCTGCTTTTATCAGCACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS TCA 90 bp TGCCAGAGCTTCCACAGCTCCCTTCTCCTCTATCAGCTTCTCAGCTaGTTGTTTGAAGTGACTAATGGCAGTGGGAGGCACGGAATCCAA +
Preference number: 5 (lower is better)
Translates to: CQSFHSSLLLYQLLS*LFEVTNGSGRHGIQ
Trigger: TTGGATTCCGTGCCTCCCACTGCCATTAGTCACTTCAAACAATCAGCTGAGAAGCTGATAGAGGAGAAGGGAGCTGTGGAAGCTCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS GCA 90 bp GCGTCCTTGATGACCACTATATACTCGGATGACATCCCCAATAACTaGTGCCCTCTGAGTCCAGTGGCACTTAATAGCCAGATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: ASLMTTIYSDDIPNN*CPLSPVALNSQMLH
Trigger: GTGGAGCATCTGGCTATTAAGTGCCACTGGACTCAGAGGGCAGCAGTTATTGGGGATGTCATCCGAGTATATAGTGGTCATCAAGGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCATCTTCAGCGCAGGTaGCCCAGGCCGACCGGTCTT +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFHLQRR*PRPTGL
Trigger: AAGACCGGTCGGCCTGGGCAACCTGCGCTGAAGATG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354185.9
CDS CCA 90 bp GTTCCACAGGTATTTCCTGCTCTATCTCACTGTTACTTTCTTCACTaGCAGCTTCACTGGGGTTACAGTCCGGTTCAGGATGAGGAAATC +
Preference number: 5 (lower is better)
Translates to: VPQVFPALSHCYFLH*QLHWGYSPVQDEEI
Trigger: GATTTCCTCATCCTGAACCGGACTGTAACCCCAGTGAAGCTGCCAGTGAAGAAAGTAACAGTGAGATAGAGCAGGAAATACCTGTGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTTCCTTCCAGTTCTGGTaGCTCTGTGGCCACAGAGAG +
Preference number: 5 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTSFQFW*LCGHRE
Trigger: CTCTCTGTGGCCACAGAGCAACCAGAACTGGAAGGA...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCTCTTTCTCCTCGGTTaGCTTTCGCAGTGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFLFLLG*LSQCLP
Trigger: GGGGAGACACTGCGAAAGCAAACCGAGGAGAAAGAG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354185.9
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTTCCTTCCAGTTCTGGTaGCTCTGTGGCCACAGAGAG +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFSFQFW*LCGHRE
Trigger: CTCTCTGTGGCCACAGAGCAACCAGAACTGGAAGGA...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CCA 90 bp TTTCCTGCTCTATCTCACTGTTACTTTCTTCACTGGCAGCTTCACTaGGGTTACAGTCCGGTTCAGGATGAGGAAATCCATTCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: FPALSHCYFLHWQLH*GYSPVQDEEIHSSV
Trigger: AACTGAAGAATGGATTTCCTCATCCTGAACCGGACTGTAACCCCAGTGAAGCTGCCAGTGAAGAAAGTAACAGTGAGATAGAGCAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCCTCATGCGTTCAAATaGACCTCCATAGGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTPHAFK*TSIGSS
Trigger: GGAACTCCCTATGGAGGTCAATTTGAACGCATGAGG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCAGGGTGATTTCCCTTaGCTTCTGTGGAATGTCTCC +
Preference number: 5 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTQGDFP*LLWNVS
Trigger: GGAGACATTCCACAGAAGCAAAGGGAAATCACCCTG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTACCATTCCCTTCACTTaGGAATCAATCTCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTTIPFT*ESISSP
Trigger: GGGCGAGGAGATTGATTCCAAAGTGAAGGGAATGGT...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTTGGGATCTGTTACTTTaGTTGCCACCTCCTGATCGC +
Preference number: 5 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTWDLLL*LPPPDR
Trigger: GCGATCAGGAGGTGGCAACAAAAGTAACAGATCCCA...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTCCCCAGCTTGCCCACTaGAAGTTAACCTCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTPQLAH*KLTSRN
Trigger: GTTTCTAGAGGTTAACTTCAAGTGGGCAAGCTGGGG...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCCAGGGTGATTTCCCTTaGCTTCTGTGGAATGTCTCC +
Preference number: 5 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAQGDFP*LLWNVS
Trigger: GGAGACATTCCACAGAAGCAAAGGGAAATCACCCTG...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTGAAAGCGCCTTCTTTTaGTTCCACAGGTATTTCCTG +
Preference number: 5 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTESAFF*FHRYFL
Trigger: CAGGAAATACCTGTGGAACAAAAAGAAGGCGCTTTC...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCAAACCCACATTTGAGTaGATCAAGGAGCGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAKPTFE*IKERWS
Trigger: AGACCAGCGCTCCTTGATCAACTCAAATGTGGGTTT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGATCTGTTACTTTTGTaGCCACCTCCTGATCGCTGT +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFDLLLL*PPPDRC
Trigger: ACAGCGATCAGGAGGTGGCAACAAAAGTAACAGATC...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCTCCGCTTCTGGCCTTaGTTTTGGGATCTGTTACTT +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFLRFWP*FWDLLL
Trigger: AAGTAACAGATCCCAAAACAAAGGCCAGAAGCGGAG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCCCTCATGCGTTCAAATaGACCTCCATAGGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFPHAFK*TSIGSS
Trigger: GGAACTCCCTATGGAGGTCAATTTGAACGCATGAGG...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTTTCTGTATGTGGTCTTaGATACGACCTGGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFFCMWS*IRPGVP
Trigger: TGGAACACCAGGTCGTATCAAAGACCACATACAGAA...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCGATGATAGTGCGTCCTaGATGACCACTATATACTCG +
Preference number: 5 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPADDSAS*MTTIYS
Trigger: CGAGTATATAGTGGTCATCAAGGACGCACTATCATC...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCACCATTCCCTTCACTTaGGAATCAATCTCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFTIPFT*ESISSP
Trigger: GGGCGAGGAGATTGATTCCAAAGTGAAGGGAATGGT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTACACCCAGCTTTCCTTaGAGAAAAACCATTCCCTTC +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFTPSFP*RKTIPF
Trigger: GAAGGGAATGGTTTTTCTCAAAGGAAAGCTGGGTGT...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCACACCCAGCTTTCCTTaGAGAAAAACCATTCCCTTC +
Preference number: 5 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPATPSFP*RKTIPF
Trigger: GAAGGGAATGGTTTTTCTCAAAGGAAAGCTGGGTGT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTGGGATCTGTTACTTTaGTTGCCACCTCCTGATCGC +
Preference number: 5 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFWDLLL*LPPPDR
Trigger: GCGATCAGGAGGTGGCAACAAAAGTAACAGATCCCA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCACTCCTCGGCCTTaGAGAAGTTTAATAGTTTCT +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFVTPRP*RSLIVS
Trigger: AGAAACTATTAAACTTCTCAAAGGCCGAGGAGTGAC...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTGAAGTCTTTGCTTACTaGATTTGCCAACTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTEVFAY*ICQLSC
Trigger: ACAAGAGAGTTGGCAAATCAAGTAAGCAAAGACTTC...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTTTGGTGAGATCTAGTTaGCCATTCTGTATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFLVRSS*PFCMWS
Trigger: AGACCACATACAGAATGGCAAACTAGATCTCACCAA...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GACATTCAGTTTAACAGATCCTATACTGTGGCTTTAGGAACTAGGCCACTGACTAGCAATGTTTGGGGATaGTCTTCAGAATCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: DIQFNRSYTVALGTRPLTSNVWG*SSESFL
Trigger: CAAGAAAGATTCTGAAGACAATCCCCAAACATTGCT...AGTCAGTGGCCTAGTTCCTAAAGCCACAGTATAGGATCTGTTAAACTGAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCGATGCTCCACAGTTATaGCCGTTTTCTGAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPADAPQL*PFSESF
Trigger: AAAAGACTCAGAAAACGGCAATAACTGTGGAGCATC...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTCTTTGGTGGAGAGCTTaGTATAACCAAATCAACCTC +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFLWWRA*YNQINL
Trigger: GAGGTTGATTTGGTTATACAAAGCTCTCCACCAAAG...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCCTTTGGTGGAGAGCTTaGTATAACCAAATCAACCTC +
Preference number: 5 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPALWWRA*YNQINL
Trigger: GAGGTTGATTTGGTTATACAAAGCTCTCCACCAAAG...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCAAACCCACATTTGAGTaGATCAAGGAGCGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFKPTFE*IKERWS
Trigger: AGACCAGCGCTCCTTGATCAACTCAAATGTGGGTTT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCGATCTGTTACTTTTGTaGCCACCTCCTGATCGCTGT +
Preference number: 5 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLDLLLL*PPPDRC
Trigger: ACAGCGATCAGGAGGTGGCAACAAAAGTAACAGATC...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCCTCCGCTTCTGGCCTTaGTTTTGGGATCTGTTACTT +
Preference number: 5 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLLRFWP*FWDLLL
Trigger: AAGTAACAGATCCCAAAACAAAGGCCAGAAGCGGAG...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCGAAAGCGCCTTCTTTTaGTTCCACAGGTATTTCCTG +
Preference number: 5 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLESAFF*FHRYFL
Trigger: CAGGAAATACCTGTGGAACAAAAAGAAGGCGCTTTC...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTTCTGTATGTGGTCTTaGATACGACCTGGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLFCMWS*IRPGVP
Trigger: TGGAACACCAGGTCGTATCAAAGACCACATACAGAA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp GGGGCTACATCAGGTTCTTCAGTTCCCTCAAAACAACTTAATCACATACAGTTTACAACATGCTTAAGTTaGGTGAGATCTAGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: GATSGSSVPSKQLNHIQFTTCLS*VRSSLP
Trigger: TGGCAAACTAGATCTCACCAAACTTAAGCATGTTGT...AAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGAAGAACCTGATGTAGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCGATGATAGTGCGTCCTaGATGACCACTATATACTCG +
Preference number: 5 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLDDSAS*MTTIYS
Trigger: CGAGTATATAGTGGTCATCAAGGACGCACTATCATC...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCGGAACACCTATTCGTTaGAACTTAATTCCCGCTTTT +
Preference number: 5 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPAGTPIR*NLIPAF
Trigger: AAAAGCGGGAATTAAGTTCAAACGAATAGGTGTTCC...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp CTTCCAATAGGAAGAAGTGGAGTACATTACCATTTAAGCACCATTTATCCAGCCAGCCTGATGGCATCTTaGCTGGAAGCTTTTATTATT +
Preference number: 5 (lower is better)
Translates to: LPIGRSGVHYHLSTIYPASLMAS*LEAFII
Trigger: AATAATAAAAGCTTCCAGCAAAGATGCCATCAGGCT...GGCTGGATAAATGGTGCTTAAATGGTAATGTACTCCACTTCTTCCTATTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCGTCACTCCTCGGCCTTaGAGAAGTTTAATAGTTTCT +
Preference number: 5 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLVTPRP*RSLIVS
Trigger: AGAAACTATTAAACTTCTCAAAGGCCGAGGAGTGAC...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTTGGTGAGATCTAGTTaGCCATTCTGTATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFLVRSS*PFCMWS
Trigger: AGACCACATACAGAATGGCAAACTAGATCTCACCAA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCGATGCTCCACAGTTATaGCCGTTTTCTGAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLDAPQL*PFSESF
Trigger: AAAAGACTCAGAAAACGGCAATAACTGTGGAGCATC...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCTCTTTCTTCATCTTCTaGGGCTTAGGAGCATCTATT +
Preference number: 5 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLSFFIF*GLGASI
Trigger: AATAGATGCTCCTAAGCCCAAGAAGATGAAGAAAGA...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCTCTTTCTTCATCTTCTaGGGCTTAGGAGCATCTATT +
Preference number: 5 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFSFFIF*GLGASI
Trigger: AATAGATGCTCCTAAGCCCAAGAAGATGAAGAAAGA...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCAATCCATTCTTCAGTTaGGGGCTTTTCTCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFNPFFS*GLFSLV
Trigger: AACTAGAGAGAAAAGCCCCAAACTGAAGAATGGATT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCGAAGTCTTTGCTTACTaGATTTGCCAACTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFEVFAY*ICQLSC
Trigger: ACAAGAGAGTTGGCAAATCAAGTAAGCAAAGACTTC...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCACAACATGCTTAAGTTaGGTGAGATCTAGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFTTCLS*VRSSLP
Trigger: TGGCAAACTAGATCTCACCAAACTTAAGCATGTTGT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TCAGTTCCCTCAAAACAACTTAATCACATACAGTTTGTCTTAAAAGGAAGCCTCAGCAATGTTTGGGGATaGTCTTCAGAATCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SVPSKQLNHIQFVLKGSLSNVWG*SSESFL
Trigger: CAAGAAAGATTCTGAAGACAATCCCCAAACATTGCT...GAGGCTTCCTTTTAAGACAAACTGTATGTGATTAAGTTGTTTTGAGGGAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS-3UTR CAA 90 bp TTTGTCTTAAAAGGAAGCCTCCAAGCAGCTAAAACAAACTTTCAACAGACATTCAGCCTGATGGCATCTTaGCTGGAAGCTTTTATTATT +
Preference number: 5 (lower is better)
Translates to: FVLKGSLQAAKTNFQQTFSLMAS*LEAFII
Trigger: AATAATAAAAGCTTCCAGCAAAGATGCCATCAGGCT...GAATGTCTGTTGAAAGTTTGTTTTAGCTGCTTGGAGGCTTCCTTTTAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS GCA 72 bp GCGGACCTGGCTCGGTCGGGCAAACGACGCGTCCACTaGCCGGGGAGCGCACCACTCCTGGGCGACCGCCCG +
Preference number: 6 (lower is better)
Translates to: ADLARSGKRRVH*PGSAPLLGDRP
Trigger: CGGGCGGTCGCCCAGGAGTGGTGCGCTCCCCGGGCAGTGGACGCGTCGTTTGCCCGACCGAGCCAGGTCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS TCA 72 bp TGGAGCCTGACTGAAGGTCCAACTCTGCGCACTGTGTaGGGCGCGCCCAAGTCGCCGGGGACCACGTGGGAC +
Preference number: 6 (lower is better)
Translates to: WSLTEGPTLRTV*GAPKSPGTTWD
Trigger: GTCCCACGTGGTCCCCGGCGACTTGGGCGCGCCTCACACAGTGCGCAGAGTTGGACCTTCAGTCAGGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS CCA 72 bp ATAAGCTCAGAGGAAGAGGTCAGCGCACGGCGGACCTaGCTCGGTCGGGCAAACGACGCGTCCACTGCCCGG +
Preference number: 6 (lower is better)
Translates to: ISSEEEVSARRT*LGRANDASTAR
Trigger: CCGGGCAGTGGACGCGTCGTTTGCCCGACCGAGCCAGGTCCGCCGTGCGCTGACCTCTTCCTCTGAGCTTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS CAA 72 bp GTCACTACGGAGTTTTCCCGGCATCTTCAGCGCAGGTaGCCCAGGCCGACCGGTCTTCTCAACCGCGTGGAG +
Preference number: 6 (lower is better)
Translates to: VTTEFSRHLQRR*PRPTGLLNRVE
Trigger: CTCCACGCGGTTGAGAAGACCGGTCGGCCTGGGCAACCTGCGCTGAAGATGCCGGGAAAACTCCGTAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354185.9
CDS GCA 72 bp TCACTACGGAGTTTTCCCGGCATCTTCAGCGCAGGTTaGCCAGGCCGACCGGTCTTCTCAACCGCGTGGAGA +
Preference number: 6 (lower is better)
Translates to: SLRSFPGIFSAG*PGRPVFSTAWR
Trigger: TCTCCACGCGGTTGAGAAGACCGGTCGGCCTGGGCAACCTGCGCTGAAGATGCCGGGAAAACTCCGTAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354185.9
CDS CCA 72 bp AAGGAGCGCTGGTCTACGGACGTGGCACCTGAAATATaGGCCAGTGCTGCTGCCAGAGCTTCCACAGCTCCC +
Preference number: 6 (lower is better)
Translates to: KERWSTDVAPEI*ASAAARASTAP
Trigger: GGGAGCTGTGGAAGCTCTGGCAGCAGCACTGGCCCATATTTCAGGTGCCACGTCCGTAGACCAGCGCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS TCA 72 bp GGGAGTTCTGTCTTAGCCAACAACGTGGAGCCTGACTaGAGGTCCAACTCTGCGCACTGTGTGAGGCGCGCC +
Preference number: 6 (lower is better)
Translates to: GSSVLANNVEPD*RSNSAHCVRRA
Trigger: GGCGCGCCTCACACAGTGCGCAGAGTTGGACCTTCAGTCAGGCTCCACGTTGTTGGCTAAGACAGAACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS TCA 72 bp GTTGATCAAGGAGCGCTGGTCTACGGACGTGGCACCTaGAATATGGGCCAGTGCTGCTGCCAGAGCTTCCAC +
Preference number: 6 (lower is better)
Translates to: VDQGALVYGRGT*NMGQCCCQSFH
Trigger: GTGGAAGCTCTGGCAGCAGCACTGGCCCATATTTCAGGTGCCACGTCCGTAGACCAGCGCTCCTTGATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS TCA 72 bp TGCCGGGAGTTCTGTCTTAGCCAACAACGTGGAGCCTaGCTGAAGGTCCAACTCTGCGCACTGTGTGAGGCG +
Preference number: 6 (lower is better)
Translates to: CREFCLSQQRGA*LKVQLCALCEA
Trigger: CGCCTCACACAGTGCGCAGAGTTGGACCTTCAGTCAGGCTCCACGTTGTTGGCTAAGACAGAACTCCCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS GCA 72 bp CCTCCATATCCTTCCCGTGGTCCTTCCAGTTCTGGTTaGTCTGTGGCCACAGAGAGCTGCCAGCGTCGTGAA +
Preference number: 6 (lower is better)
Translates to: PPYPSRGPSSSG*SVATESCQRRE
Trigger: TTCACGACGCTGGCAGCTCTCTGTGGCCACAGAGCAACCAGAACTGGAAGGACCACGGGAAGGATATGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CCA 72 bp GCTCCAACAGGGCCTCTCTACCAGAGTTCCGACCTGTaGATGCCTATAAGCTCAGAGGAAGAGGTCAGCGCA +
Preference number: 6 (lower is better)
Translates to: APTGPLYQSSDL*MPISSEEEVSA
Trigger: TGCGCTGACCTCTTCCTCTGAGCTTATAGGCATCCACAGGTCGGAACTCTGGTAGAGAGGCCCTGTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS GCA 72 bp TTTGACTTGACGTGTAACTTCCTTCGCGCACGCTCATaGCGGGAGTTCTGTCTTAGCCAACAACGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: FDLTCNFLRARS*REFCLSQQRGA
Trigger: GGCTCCACGTTGTTGGCTAAGACAGAACTCCCGGCATGAGCGTGCGCGAAGGAAGTTACACGTCAAGTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620315.1
CDS CAA 90 bp CTGAAACTCCGCTTCTGGCCTTTGTTTTGGGATCTGTTACTTTTGTaGCCACCTCCTGATCGCTGTCCTCTCGGGCCTCTACTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: LKLRFWPLFWDLLLL*PPPDRCPLGPLLPS
Trigger: GGAAGGCAGTAGAGGCCCGAGAGGACAGCGATCAGGAGGTGGCAACAAAAGTAACAGATCCCAAAACAAAGGCCAGAAGCGGAGTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS TCA 72 bp TTTGTTTTGGGATCTGTTACTTTTGTTGCCACCTCCTaGTCGCTGTCCTCTCGGGCCTCTACTGCCTTCCCG +
Preference number: 6 (lower is better)
Translates to: FVLGSVTFVATS*SLSSRASTAFP
Trigger: CGGGAAGGCAGTAGAGGCCCGAGAGGACAGCGATCAGGAGGTGGCAACAAAAGTAACAGATCCCAAAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CAA 90 bp TTACTGAAACTCCGCTTCTGGCCTTTGTTTTGGGATCTGTTACTTTaGTTGCCACCTCCTGATCGCTGTCCTCTCGGGCCTCTACTGCCT +
Preference number: 6 (lower is better)
Translates to: LLKLRFWPLFWDLLL*LPPPDRCPLGPLLP
Trigger: AGGCAGTAGAGGCCCGAGAGGACAGCGATCAGGAGGTGGCAACAAAAGTAACAGATCCCAAAACAAAGGCCAGAAGCGGAGTTTCAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CCA 72 bp GTCACAAAACCCACATTTGAGTTGATCAAGGAGCGCTaGTCTACGGACGTGGCACCTGAAATATGGGCCAGT +
Preference number: 6 (lower is better)
Translates to: VTKPTFELIKER*STDVAPEIWAS
Trigger: ACTGGCCCATATTTCAGGTGCCACGTCCGTAGACCAGCGCTCCTTGATCAACTCAAATGTGGGTTTTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS GCA 72 bp GTCTTTGCTTACTTGATTTGCCAACTCTCTTGTAGGTaGAAGAACCAGTACCTGAGGGGCACGGCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: VFAYLICQLSCR*KNQYLRGTASL
Trigger: AAGAGAGGCCGTGCCCCTCAGGTACTGGTTCTTGCACCTACAAGAGAGTTGGCAAATCAAGTAAGCAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS TCA 72 bp TTCTCCTCTATCAGCTTCTCAGCTGATTGTTTGAAGTaGCTAATGGCAGTGGGAGGCACGGAATCCAAAAGC +
Preference number: 6 (lower is better)
Translates to: FSSISFSADCLK*LMAVGGTESKS
Trigger: GCTTTTGGATTCCGTGCCTCCCACTGCCATTAGTCACTTCAAACAATCAGCTGAGAAGCTGATAGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CCA 72 bp CTATCTCACTGTTACTTTCTTCACTGGCAGCTTCACTaGGGTTACAGTCCGGTTCAGGATGAGGAAATCCAT +
Preference number: 6 (lower is better)
Translates to: LSHCYFLHWQLH*GYSPVQDEEIH
Trigger: ATGGATTTCCTCATCCTGAACCGGACTGTAACCCCAGTGAAGCTGCCAGTGAAGAAAGTAACAGTGAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CCA 72 bp GTATTTCCTGCTCTATCTCACTGTTACTTTCTTCACTaGCAGCTTCACTGGGGTTACAGTCCGGTTCAGGAT +
Preference number: 6 (lower is better)
Translates to: VFPALSHCYFLH*QLHWGYSPVQD
Trigger: ATCCTGAACCGGACTGTAACCCCAGTGAAGCTGCCAGTGAAGAAAGTAACAGTGAGATAGAGCAGGAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CCA 72 bp AATGCTTTACTGAAACTCCGCTTCTGGCCTTTGTTTTaGGATCTGTTACTTTTGTTGCCACCTCCTGATCGC +
Preference number: 6 (lower is better)
Translates to: NALLKLRFWPLF*DLLLLLPPPDR
Trigger: GCGATCAGGAGGTGGCAACAAAAGTAACAGATCCCAAAACAAAGGCCAGAAGCGGAGTTTCAGTAAAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CAA 72 bp CCCAGCTTTCCTTTGAGAAAAACCATTCCCTTCACTTaGGAATCAATCTCCTCGCCCAGCTGCTCTTTAAGT +
Preference number: 6 (lower is better)
Translates to: PSFPLRKTIPFT*ESISSPSCSLS
Trigger: ACTTAAAGAGCAGCTGGGCGAGGAGATTGATTCCAAAGTGAAGGGAATGGTTTTTCTCAAAGGAAAGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CAA 90 bp AACTCCAAAACTACCATTTCTAAAACCTTTCAGGGTGATTTCCCTTaGCTTCTGTGGAATGTCTCCATGCAAGGACTGAGCATCCTGCTT +
Preference number: 6 (lower is better)
Translates to: NSKTTISKTFQGDFP*LLWNVSMQGLSILL
Trigger: AAGCAGGATGCTCAGTCCTTGCATGGAGACATTCCACAGAAGCAAAGGGAAATCACCCTGAAAGGTTTTAGAAATGGTAGTTTTGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CAA 90 bp AAGCAAACACCCAGCTTTCCTTTGAGAAAAACCATTCCCTTCACTTaGGAATCAATCTCCTCGCCCAGCTGCTCTTTAAGTTCTTTCCAA +
Preference number: 6 (lower is better)
Translates to: KQTPSFPLRKTIPFT*ESISSPSCSLSSFQ
Trigger: TTGGAAAGAACTTAAAGAGCAGCTGGGCGAGGAGATTGATTCCAAAGTGAAGGGAATGGTTTTTCTCAAAGGAAAGCTGGGTGTTTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS TCA 72 bp TCTTTCTTGTATGCCACACTTAAAATCTCTTCCACTTaGTCAGCAAATCCCATATCCAACATCTGGTCCACT +
Preference number: 6 (lower is better)
Translates to: SFLYATLKISST*SANPISNIWST
Trigger: AGTGGACCAGATGTTGGATATGGGATTTGCTGATCAAGTGGAAGAGATTTTAAGTGTGGCATACAAGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CAA 72 bp TTCTTTCTTGGTTTCACAAAAGATGATAGTGCGTCCTaGATGACCACTATATACTCGGATGACATCCCCAAT +
Preference number: 6 (lower is better)
Translates to: FFLGFTKDDSAS*MTTIYSDDIPN
Trigger: ATTGGGGATGTCATCCGAGTATATAGTGGTCATCAAGGACGCACTATCATCTTTTGTGAAACCAAGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1
CDS CAA 72 bp TTCAGATATGGGAAAATTAGAGAAAGCGCCTTCTTTTaGTTCCACAGGTATTTCCTGCTCTATCTCACTGTT +
Preference number: 6 (lower is better)
Translates to: FRYGKIRESAFF*FHRYFLLYLTV
Trigger: AACAGTGAGATAGAGCAGGAAATACCTGTGGAACAAAAAGAAGGCGCTTTCTCTAATTTTCCCATATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354185.9
ENST00000620315.1