Pregenerated sensors for DDX19A-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000261777Ensembl transcript IDs: ENST00000562077.5, ENST00000570278.1, ENST00000666089.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGCTCAGACATTTTAAGAAGCGAGGAGGCCGCGTCCTGGAAGGGTaGGCAAAAAGCGCGAGGTTTGCGCACGAAGGGAAAGGCGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: ELRHFKKRGGRVLEG*AKSARFAHEGKGEA Trigger: GGCCTCGCCTTTCCCTTCGTGCGCAAACCTCGCGCTTTTTGCTCACCCTTCCAGGACGCGGCCTCCTCGCTTCTTAAAATGTCTGAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666089.1 |
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| CDS GCA 90 bp | CTGCTTGTTCTCTGGCTTGGAGTGGATGGGGCAGCCTCCAGCTCCTaGTCCATTTGCTTCCCAGCTCATACCCTCTGCTCCACCTCCACT | + |
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Preference number: 5 (lower is better) Translates to: LLVLWLGVDGAASSS*SICFPAHTLCSTST Trigger: AGTGGAGGTGGAGCAGAGGGTATGAGCTGGGAAGCAAATGGAGCAGGAGCTGGAGGCTGCCCCATCCACTCCAAGCCAGAGAACAAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CCA 90 bp | GGATCTCCTGTGGCAGCCTCTGCTTGTTCTCTGGCTTGGAGTGGATaGGGCAGCCTCCAGCTCCTGCTCCATTTGCTTCCCAGCTCATAC | + |
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Preference number: 5 (lower is better) Translates to: GSPVAASACSLAWSG*GSLQLLLHLLPSSY Trigger: GTATGAGCTGGGAAGCAAATGGAGCAGGAGCTGGAGGCTGCCCCATCCACTCCAAGCCAGAGAACAAGCAGAGGCTGCCACAGGAGATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS GCA 90 bp | GCAGCCTCCAGCTCCTGCTCCATTTGCTTCCCAGCTCATACCCTCTaGTCCACCTCCACTATTGCAGGACTTTCCTCAGATGCTGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: AASSSCSICFPAHTL*STSTIAGLSSDAGL Trigger: TAGCCCAGCATCTGAGGAAAGTCCTGCAATAGTGGAGGTGGAGCAGAGGGTATGAGCTGGGAAGCAAATGGAGCAGGAGCTGGAGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS GCA 90 bp | TTGAACCCGGAAGGTGGATGTTGCAGTGAGCCGAGACTGCACCTTTaGACTGCAGCCTGGGCAATAGATCGAGACTCTTTTGGAAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: LNPEGGCCSEPRLHL*TAAWAIDRDSFGSF Trigger: GAAACTTCCAAAAGAGTCTCGATCTATTGCCCAGGCTGCAGTGCAAAGGTGCAGTCTCGGCTCACTGCAACATCCACCTTCCGGGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562077.5 |
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| CDS TCA 90 bp | TCCTTTGTTCAAAGCCCTACAGTTCAGAGACTTACACATTTAATGTaGGATATGACAGGCTTAAAAAGAAACGTTGGGGGCCGGGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: SFVQSPTVQRLTHLM*DMTGLKRNVGGRAR Trigger: CCGCGCCCGGCCCCCAACGTTTCTTTTTAAGCCTGTCATATCTCACATTAAATGTGTAAGTCTCTGAACTGTAGGGCTTTGAACAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CCA 90 bp | TTCTCCCCCACTGCACTCTGTTATCGCGTTCCTAACAGTAGAAATTaGCATCATATAGTATTCTCATGGAACTTTCCTTTGTTCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: FSPTALCYRVPNSRN*HHIVFSWNFPLFKA Trigger: GGCTTTGAACAAAGGAAAGTTCCATGAGAATACTATATGATGCCAATTTCTACTGTTAGGAACGCGATAACAGAGTGCAGTGGGGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CCA 90 bp | TATCGCGTTCCTAACAGTAGAAATTGGCATCATATAGTATTCTCATaGAACTTTCCTTTGTTCAAAGCCCTACAGTTCAGAGACTTACAC | + |
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Preference number: 5 (lower is better) Translates to: YRVPNSRNWHHIVFS*NFPLFKALQFRDLH Trigger: GTGTAAGTCTCTGAACTGTAGGGCTTTGAACAAAGGAAAGTTCCATGAGAATACTATATGATGCCAATTTCTACTGTTAGGAACGCGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CCA 72 bp | GCCCAGGATCTCCTGTGGCAGCCTCTGCTTGTTCTCTaGCTTGGAGTGGATGGGGCAGCCTCCAGCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: AQDLLWQPLLVL*LGVDGAASSSC Trigger: GCAGGAGCTGGAGGCTGCCCCATCCACTCCAAGCCAGAGAACAAGCAGAGGCTGCCACAGGAGATCCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS GCA 72 bp | CTCTGGCTTGGAGTGGATGGGGCAGCCTCCAGCTCCTaGTCCATTTGCTTCCCAGCTCATACCCTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LWLGVDGAASSS*SICFPAHTLCS Trigger: GGAGCAGAGGGTATGAGCTGGGAAGCAAATGGAGCAGGAGCTGGAGGCTGCCCCATCCACTCCAAGCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS TCA 72 bp | CGAGAATTGCTTGAACCCGGAAGGTGGATGTTGCAGTaGGCCGAGACTGCACCTTTGCACTGCAGCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RELLEPGRWMLQ*AETAPLHCSLG Trigger: GCCCAGGCTGCAGTGCAAAGGTGCAGTCTCGGCTCACTGCAACATCCACCTTCCGGGTTCAAGCAATTCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562077.5 |
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| CDS GCA 72 bp | AGGCACGAGAATTGCTTGAACCCGGAAGGTGGATGTTaGAGTGAGCCGAGACTGCACCTTTGCACTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RHENCLNPEGGC*SEPRLHLCTAA Trigger: GGCTGCAGTGCAAAGGTGCAGTCTCGGCTCACTGCAACATCCACCTTCCGGGTTCAAGCAATTCTCGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562077.5 |
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| CDS CCA 72 bp | AGCTCAGACATTTTAAGAAGCGAGGAGGCCGCGTCCTaGAAGGGTGAGCAAAAAGCGCGAGGTTTGCGCACG | + |
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Preference number: 6 (lower is better) Translates to: SSDILRSEEAAS*KGEQKARGLRT Trigger: CGTGCGCAAACCTCGCGCTTTTTGCTCACCCTTCCAGGACGCGGCCTCCTCGCTTCTTAAAATGTCTGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666089.1 |
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| CDS CAA 72 bp | TCCCAGCTATTCGCGAGGCTGAGGCACGAGAATTGCTaGAACCCGGAAGGTGGATGTTGCAGTGAGCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: SQLFARLRHENC*NPEGGCCSEPR Trigger: TCTCGGCTCACTGCAACATCCACCTTCCGGGTTCAAGCAATTCTCGTGCCTCAGCCTCGCGAATAGCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562077.5 |
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| CDS TCA 72 bp | CATTTTAAGAAGCGAGGAGGCCGCGTCCTGGAAGGGTaGGCAAAAAGCGCGAGGTTTGCGCACGAAGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: HFKKRGGRVLEG*AKSARFAHEGK Trigger: TTTCCCTTCGTGCGCAAACCTCGCGCTTTTTGCTCACCCTTCCAGGACGCGGCCTCCTCGCTTCTTAAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666089.1 |
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| CDS GCA 72 bp | AGCTCCTGCTCCATTTGCTTCCCAGCTCATACCCTCTaGTCCACCTCCACTATTGCAGGACTTTCCTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSCSICFPAHTL*STSTIAGLSSD Trigger: ATCTGAGGAAAGTCCTGCAATAGTGGAGGTGGAGCAGAGGGTATGAGCTGGGAAGCAAATGGAGCAGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CAA 72 bp | GCTTCCCAGCTCATACCCTCTGCTCCACCTCCACTATaGCAGGACTTTCCTCAGATGCTGGGCTATGTCATA | + |
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Preference number: 6 (lower is better) Translates to: ASQLIPSAPPPL*QDFPQMLGYVI Trigger: TATGACATAGCCCAGCATCTGAGGAAAGTCCTGCAATAGTGGAGGTGGAGCAGAGGGTATGAGCTGGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CAA 90 bp | GGCCAGTGTTTCCTTCATGCTAATCTAGATGCTGTGGCTGATTACTaGCCCAGGATCTCCTGTGGCAGCCTCTGCTTGTTCTCTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: GQCFLHANLDAVADY*PRISCGSLCLFSGL Trigger: CAAGCCAGAGAACAAGCAGAGGCTGCCACAGGAGATCCTGGGCAAGTAATCAGCCACAGCATCTAGATTAGCATGAAGGAAACACTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CAA 90 bp | GCTCCATTTGCTTCCCAGCTCATACCCTCTGCTCCACCTCCACTATaGCAGGACTTTCCTCAGATGCTGGGCTATGTCATAGAGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: APFASQLIPSAPPPL*QDFPQMLGYVIEKL Trigger: CAACTTCTCTATGACATAGCCCAGCATCTGAGGAAAGTCCTGCAATAGTGGAGGTGGAGCAGAGGGTATGAGCTGGGAAGCAAATGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CAA 72 bp | TTCCTTCATGCTAATCTAGATGCTGTGGCTGATTACTaGCCCAGGATCTCCTGTGGCAGCCTCTGCTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: FLHANLDAVADY*PRISCGSLCLF Trigger: GAACAAGCAGAGGCTGCCACAGGAGATCCTGGGCAAGTAATCAGCCACAGCATCTAGATTAGCATGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CCA 72 bp | ACTGCACTCTGTTATCGCGTTCCTAACAGTAGAAATTaGCATCATATAGTATTCTCATGGAACTTTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TALCYRVPNSRN*HHIVFSWNFPL Trigger: CAAAGGAAAGTTCCATGAGAATACTATATGATGCCAATTTCTACTGTTAGGAACGCGATAACAGAGTGCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CCA 72 bp | ATATATAGTACAAATTGGGGAGTAAATATGTGGGTCTaGATAGGAGGAATAGATAACTGCAGGAAAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: IYSTNWGVNMWV*IGGIDNCRKRG Trigger: CCCTCTTTTCCTGCAGTTATCTATTCCTCCTATCCAGACCCACATATTTACTCCCCAATTTGTACTATATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000562077.5 ENST00000666089.1 |
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| CDS CCA 72 bp | CCTAACAGTAGAAATTGGCATCATATAGTATTCTCATaGAACTTTCCTTTGTTCAAAGCCCTACAGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PNSRNWHHIVFS*NFPLFKALQFR Trigger: TCTGAACTGTAGGGCTTTGAACAAAGGAAAGTTCCATGAGAATACTATATGATGCCAATTTCTACTGTTAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CAA 72 bp | AATTGGCATCATATAGTATTCTCATGGAACTTTCCTTaGTTCAAAGCCCTACAGTTCAGAGACTTACACATT | + |
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Preference number: 6 (lower is better) Translates to: NWHHIVFSWNFP*FKALQFRDLHI Trigger: AATGTGTAAGTCTCTGAACTGTAGGGCTTTGAACAAAGGAAAGTTCCATGAGAATACTATATGATGCCAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562077.5 ENST00000570278.1 ENST00000666089.1 |
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| CDS CAA 72 bp | TATTTTGACACATTTGACATGGATGACGAGACCAACTaGTCCAATATTAAGGTACAGACTTTGTTAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: YFDTFDMDDETN*SNIKVQTLLIP Trigger: AGGAATTAACAAAGTCTGTACCTTAATATTGGACAAGTTGGTCTCGTCATCCATGTCAAATGTGTCAAAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666089.1 |
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