RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDX17 (Homo sapiens)

Ensembl gene IDs: ENSG00000100201

Ensembl transcript IDs: ENST00000216019.11, ENST00000396821.8, ENST00000403230.3, ENST00000431312.2, ENST00000432525.5, ENST00000467279.1, ENST00000475004.6, ENST00000477112.1, ENST00000479734.1, ENST00000497196.5

Found 542 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGCGGCCTCCTTTCGAAAACTCCGCCTTCTGACACGGGACCACTaGAGCGCGGGGAGCATGCATCAAGGGTCCGTGGCAGTGAGAAGT +
Preference number: 1 (lower is better)
Translates to: LAASFRKLRLLTRDH*SAGSMHQGSVAVRS
Trigger: ACTTCTCACTGCCACGGACCCTTGATGCATGCTCCCCGCGCTCCAGTGGTCCCGTGTCAGAAGGCGGAGTTTTCGAAAGGAGGCCGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475004.6
3UTR GCA 90 bp CATCTTCCACATCGATGCACACTCCCTCCTCCTTTGGGAAACCGCTaGAGCCGATCCCGTCTCTTTGCCTTTTATTTTTGGCGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: HLPHRCTLPPPLGNR*SRSRLFAFYFWRPP
Trigger: AGGAGGCCGCCAAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGTGCATCGATGTGGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475004.6
3UTR CCA 90 bp ACAATGCCCACAACAGACTGGCCAGTGCTTAGACAAATTTGGGGTTaGGGGGAACACTTTGGTTTGAAAGCACAGAGCAGTTTGCCATGT +
Preference number: 1 (lower is better)
Translates to: TMPTTDWPVLRQIWG*GEHFGLKAQSSLPC
Trigger: ACATGGCAAACTGCTCTGTGCTTTCAAACCAAAGTGTTCCCCCCAACCCCAAATTTGTCTAAGCACTGGCCAGTCTGTTGTGGGCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CCA 90 bp CACAAACTTGACATCTTCCACATCGATGCACACTCCCTCCTCCTTTaGGAAACCGCTGCAGCCGATCCCGTCTCTTTGCCTTTTATTTTT +
Preference number: 1 (lower is better)
Translates to: HKLDIFHIDAHSLLL*ETAAADPVSLPFIF
Trigger: AAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGTGCATCGATGTGGAAGATGTCAAGTTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475004.6
3UTR GCA 90 bp ATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCACTTaGTTGCCCAGAGACCTTTCCCTCAAACAGATGCTTTCAAGAGCT +
Preference number: 1 (lower is better)
Translates to: MSQVEKGKQAIQITT*LPRDLSLKQMLSRA
Trigger: AGCTCTTGAAAGCATCTGTTTGAGGGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR TCA 90 bp ACAGGAATGTGTCTGGAGACCAGCAAGAACATCAATAGAGAGCACTaGTCCCAAGCAAAAGCCACTAACCTTTTAGATGAGAAGTCCACA +
Preference number: 1 (lower is better)
Translates to: TGMCLETSKNINREH*SQAKATNLLDEKST
Trigger: TGTGGACTTCTCATCTAAAAGGTTAGTGGCTTTTGCTTGGGATCAGTGCTCTCTATTGATGTTCTTGCTGGTCTCCAGACACATTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR GCA 90 bp TCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTaGTTAATACATTGGAACCCTTTCCCTAAGTTGAGTTTCAACCAT +
Preference number: 1 (lower is better)
Translates to: STQRIVREDWGEAAH*LIHWNPFPKLSFNH
Trigger: ATGGTTGAAACTCAACTTAGGGAAAGGGTTCCAATGTATTAAGCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CCA 90 bp ATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCTTAATACATTaGAACCCTTTCCCTAAGTTGAGTTTCAACCATGAATGCAATAAC +
Preference number: 1 (lower is better)
Translates to: IVREDWGEAAHCLIH*NPFPKLSFNHECNN
Trigger: GTTATTGCATTCATGGTTGAAACTCAACTTAGGGAAAGGGTTCCAATGTATTAAGCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTaGAGACCAGCAAGAACATCAATAGAGAGCACTGATCCCAAGCAA +
Preference number: 1 (lower is better)
Translates to: THLQVFQVLMQQECV*RPARTSIESTDPKQ
Trigger: TTGCTTGGGATCAGTGCTCTCTATTGATGTTCTTGCTGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR TCA 90 bp TTATTCCAGACTGGATCATTTTGGTGGGCAGAAGAAACCTGGCAGTaGATTCTAACTAATCTGCATGAAAAGACAAATCACGATGGTTGG +
Preference number: 1 (lower is better)
Translates to: LFQTGSFWWAEETWQ*ILTNLHEKTNHDGW
Trigger: CCAACCATCGTGATTTGTCTTTTCATGCAGATTAGTTAGAATTCACTGCCAGGTTTCTTCTGCCCACCAAAATGATCCAGTCTGGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR GCA 90 bp TTACATGCATATATTTCAGCTTATGCTGAAGACCTACCTGTATGTTaGACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTC +
Preference number: 1 (lower is better)
Translates to: LHAYISAYAEDLPVC*TLNHTFRTPQKPSL
Trigger: GAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACAGGTAGGTCTTCAGCATAAGCTGAAATATATGCATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR GCA 90 bp TATAAAAACTGGTTAGTAAATTTCCAGCGAGCATTTATGTTCATTTaGTCACAGCAGCTGTCTGGATGGAAAATTAATTTCACAGATGGT +
Preference number: 1 (lower is better)
Translates to: YKNWLVNFQRAFMFI*SQQLSGWKINFTDG
Trigger: ACCATCTGTGAAATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCTGGAAATTTACTAACCAGTTTTTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR GCA 90 bp GACAATTTACAAACTAAGAATAGTAACATAGCTTTCAGCATCCTGTaGCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAA +
Preference number: 1 (lower is better)
Translates to: DNLQTKNSNIAFSIL*LNITHLQVFQVLMQ
Trigger: TTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATTCTTAGTTTGTAAATTGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp GGAAACCGCTGCAGCCGATCCCGTCTCTTTGCCTTTTATTTTTGGCGGCCTCCTCTGACACGGGACCACTaGAGCGCGGGGAGCATGCAT +
Preference number: 2 (lower is better)
Translates to: GNRCSRSRLFAFYFWRPPLTRDH*SAGSMH
Trigger: ATGCATGCTCCCCGCGCTCCAGTGGTCCCGTGTCAG...AGGAGGCCGCCAAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475004.6
3UTR-3UTR GCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCGGTTGTAGAAAACAATaGCCACAACAGACTGGCCAG +
Preference number: 2 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCGCRKQ*PQQTGQ
Trigger: CTGGCCAGTCTGTTGTGGGCATTGTTTTCTACAACC...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CAA 90 bp TCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCACTTGCTaGCCCAGAGACCTTTCCCTCAAACAGATGCTTTCAAGAGCTGCG +
Preference number: 2 (lower is better)
Translates to: SQVEKGKQAIQITTC*PRDLSLKQMLSRAA
Trigger: CGCAGCTCTTGAAAGCATCTGTTTGAGGGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCGCTGTTAGAAAGCACTaGAGAGAACAGGGTATGAAG +
Preference number: 2 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCAVRKH*REQGMK
Trigger: CTTCATACCCTGTTCTCTGCAGTGCTTTCTAACAGC...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CAA 90 bp AATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCACTaGCTTGCCCAGAGACCTTTCCCTCAAACAGATGCTTTCAAGAGC +
Preference number: 2 (lower is better)
Translates to: NVPGGKREASNPNNH*LAQRPFPQTDAFKS
Trigger: GCTCTTGAAAGCATCTGTTTGAGGGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR TCA 90 bp TTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCCTAGTTTCTGGGGCTGTCTaGTGTCCCTATCCTGTTGTA +
Preference number: 2 (lower is better)
Translates to: LHIESYFQNPSETIPLSLVSGAV*CPYPVV
Trigger: TACAACAGGATAGGGACATCAGACAGCCCCAGAAAC...TAGGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGGCACAAAAGAAAATGTaGAGGGCAATCCCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGAQKKM*RAIPLC
Trigger: ACAAAGAGGGATTGCCCTGCACATTTTCTTTTGTGC...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCGCTAGATTTCAGCTGTaGTCAGGCCATAATAGTTTT +
Preference number: 2 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCARFQL*SGHNSF
Trigger: AAAACTATTATGGCCTGAGCACAGCTGAAATCTAGC...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAACTGGATCATTTTGGTaGGCAGAAGAAACCTGGCAG +
Preference number: 2 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPTGSFW*AEETWQ
Trigger: CTGCCAGGTTTCTTCTGCCCACCAAAATGATCCAGT...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR TCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAGGCTTTAGTCCTCCATaGCTTTTCTTAAGCACTACC +
Preference number: 2 (lower is better)
Translates to: VTDMEAEELNSARFQLCSGFSPP*LFLSTT
Trigger: GGTAGTGCTTAAGAAAAGTCATGGAGGACTAAAGCC...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR TCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGTATTTCAGCTTATGCTaGAGACCTACCTGTATGTTG +
Preference number: 2 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGYFSLC*RPTCML
Trigger: CAACATACAGGTAGGTCTTCAGCATAAGCTGAAATA...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGCCTTAGCCAAAGAATaGAGTGGAGCCTTCCCCCTT +
Preference number: 2 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATALAKE*SGAFPL
Trigger: AAGGGGGAAGGCTCCACTGCATTCTTTGGCTAAGGC...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCACAACAGACTGGCCAGTaGTTAGACAAATTTGGGGTT +
Preference number: 2 (lower is better)
Translates to: VTDMEAEELNSARFQLCSQQTGQ*LDKFGV
Trigger: AACCCCAAATTTGTCTAAGCACTGGCCAGTCTGTTG...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAATCCAAATAACCACTTaGTTGCCCAGAGACCTTTCC +
Preference number: 2 (lower is better)
Translates to: VTDMEAEELNSARFQLCSIQITT*LPRDLS
Trigger: GGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGAT...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp TTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCCTAACTGGATCATTTTGGTaGGCAGAAGAAACCTGGCAG +
Preference number: 2 (lower is better)
Translates to: LHIESYFQNPSETIPLSLTGSFW*AEETWQ
Trigger: CTGCCAGGTTTCTTCTGCCCACCAAAATGATCCAGT...TAGGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGAATGTTATTCCAGACTaGATCATTTTGGTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGNVIPD*IILVGR
Trigger: TCTGCCCACCAAAATGATCCAGTCTGGAATAACATT...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATTCTGGAAGGGGTTTCTaGGGCTGTCTGATGTCCCTA +
Preference number: 2 (lower is better)
Translates to: KATNLLDEKSTQRIVREDSGRGF*GCLMSL
Trigger: TAGGGACATCAGACAGCCCCAGAAACCCCTTCCAGA...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATGTCCCATATCAGATCTaGAAGGGGTTTCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: KATNLLDEKSTQRIVREDVPYQI*KGFLGL
Trigger: CAGCCCCAGAAACCCCTTCCAGATCTGATATGGGAC...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAACCCAGATGCTGAGATaGTACAGTTTAACCACTACA +
Preference number: 2 (lower is better)
Translates to: VTDMEAEELNSARFQLCSTQMLR*YSLTTT
Trigger: TGTAGTGGTTAAACTGTAGCATCTCAGCATCTGGGT...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCGCTGTTAGAAAGCACTaGAGAGAACAGGGTATGAAG +
Preference number: 2 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFAVRKH*REQGMK
Trigger: CTTCATACCCTGTTCTCTGCAGTGCTTTCTAACAGC...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGAGCCTGACACTAAAATaGTTATTTTTCAGTAACGGG +
Preference number: 2 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGSLTLK*LFFSNG
Trigger: CCCGTTACTGAAAAATAACCATTTTAGTGTCAGGCT...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCATCACCTACCTTCAGATaGAGGAAAAGTGAAAAGGAC +
Preference number: 2 (lower is better)
Translates to: VTDMEAEELNSARFQLCSSPTFR*RKSEKD
Trigger: GTCCTTTTCACTTTTCCTCCATCTGAAGGTAGGTGA...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTTCTGGAAGGGGTTTCTaGGGCTGTCTGATGTCCCTA +
Preference number: 2 (lower is better)
Translates to: CLNITHLQVFQVLMQQECSGRGF*GCLMSL
Trigger: TAGGGACATCAGACAGCCCCAGAAACCCCTTCCAGA...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAAGCCAAAGAATGCAGTaGAGCCTTCCCCCTTCAACT +
Preference number: 2 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATSQRMQ*SLPPST
Trigger: AGTTGAAGGGGGAAGGCTCCACTGCATTCTTTGGCT...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATAGCCAAAGAATGCAGTaGAGCCTTCCCCCTTCAACT +
Preference number: 2 (lower is better)
Translates to: KATNLLDEKSTQRIVREDSQRMQ*SLPPST
Trigger: AGTTGAAGGGGGAAGGCTCCACTGCATTCTTTGGCT...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CAA 90 bp GCATATATTTCAGCTTATGCTGAAGACCTACCTGTATGTTGCACATaGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: AYISAYAEDLPVCCT*NHTFRTPQKPSLSP
Trigger: GGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACAGGTAGGTCTTCAGCATAAGCTGAAATATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCATGCCGAAGAAAATCTaGACCCAGAAGCTGTTAGAA +
Preference number: 2 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFMPKKI*TQKLLE
Trigger: TTCTAACAGCTTCTGGGTGCAGATTTTCTTCGGCAT...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCACAGACTGGATCATTTTaGTGGGCAGAAGAAACCTGG +
Preference number: 2 (lower is better)
Translates to: THLQVFQVLMQQECVWRPQTGSF*WAEETW
Trigger: CCAGGTTTCTTCTGCCCACCAAAATGATCCAGTCTG...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR TCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCGAAGAAACCTGGCAGTaGATTCTAACTAATCTGCAT +
Preference number: 2 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFEETWQ*ILTNLH
Trigger: ATGCAGATTAGTTAGAATTCACTGCCAGGTTTCTTC...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR TCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACACTACCTGTAATAAGCTaGGTGCAAAAGGATGCCGAA +
Preference number: 2 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATLPVIS*VQKDAE
Trigger: TTCGGCATCCTTTTGCACTCAGCTTATTACAGGTAG...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCACAAATATCTTCAACATaGAAGAAGTTGGGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: VTDMEAEELNSARFQLCSQISST*KKLGEE
Trigger: TTCTTCCCCCAACTTCTTGCATGTTGAAGATATTTG...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAGACCTACCTGTATGTTaGACATTGAATCATACTTTC +
Preference number: 2 (lower is better)
Translates to: VTDMEAEELNSARFQLCSDLPVC*TLNHTF
Trigger: GAAAGTATGATTCAATGTGCAACATACAGGTAGGTC...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGGTTGTAGAAAACAATaGCCACAACAGACTGGCCAG +
Preference number: 2 (lower is better)
Translates to: CLNITHLQVFQVLMQQECGCRKQ*PQQTGQ
Trigger: CTGGCCAGTCTGTTGTGGGCATTGTTTTCTACAACC...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATTTTCCCTCAAACAGATaGTTTCAAGAGCTGCGAGAG +
Preference number: 2 (lower is better)
Translates to: KATNLLDEKSTQRIVREDFPSNR*FQELRE
Trigger: CTCTCGCAGCTCTTGAAAGCATCTGTTTGAGGGAAA...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCGGAGAAGCAGCCCATTaGTTAATACATTGGAACCCT +
Preference number: 2 (lower is better)
Translates to: NSNIAFSILCLNITHLQVGEAAH*LIHWNP
Trigger: AGGGTTCCAATGTATTAAGCAATGGGCTGCTTCTCC...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTCAGACTGGATCATTTTaGTGGGCAGAAGAAACCTGG +
Preference number: 2 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLIQTGSF*WAEETW
Trigger: CCAGGTTTCTTCTGCCCACCAAAATGATCCAGTCTG...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAAGCCTGACACTAAAATaGTTATTTTTCAGTAACGGG +
Preference number: 2 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPSLTLK*LFFSNG
Trigger: CCCGTTACTGAAAAATAACCATTTTAGTGTCAGGCT...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCACCTACCTTCAGATaGAGGAAAAGTGAAAAGGAC +
Preference number: 2 (lower is better)
Translates to: CMLHIESYFQNPSETIPLSPTFR*RKSEKD
Trigger: GTCCTTTTCACTTTTCCTCCATCTGAAGGTAGGTGA...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR TCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCGAAGAAACCTGGCAGTaGATTCTAACTAATCTGCAT +
Preference number: 2 (lower is better)
Translates to: CMLHIESYFQNPSETIPLEETWQ*ILTNLH
Trigger: ATGCAGATTAGTTAGAATTCACTGCCAGGTTTCTTC...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR TCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCAACCTGAATTATAAGTaGCAGACATGGAGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: NSNIAFSILCLNITHLQVNLNYK*QTWRQK
Trigger: CTTCTGCCTCCATGTCTGTCACTTATAATTCAGGTT...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATCCTTCCCCCTTCAACTaGATTGTGAATGAATACCAA +
Preference number: 2 (lower is better)
Translates to: KATNLLDEKSTQRIVREDPSPFN*IVNEYQ
Trigger: TTGGTATTCATTCACAATGCAGTTGAAGGGGGAAGG...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCAAGCACAGAGCAGTTTaGCATGTTTCTTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: FMITMSQVEKGKQAIQITKHRAV*HVSSVP
Trigger: AGGCACAGAAGAAACATGGCAAACTGCTCTGTGCTT...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCAAAGGGCAGAGTAGGTaGCAAAGAGTTGCTTTTAAT +
Preference number: 2 (lower is better)
Translates to: CMLHIESYFQNPSETIPLKGQSR*QRVAFN
Trigger: ATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTT...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACATTACAATGTCCCAGGTaGAAAAAGGGAAGCAAGCAA +
Preference number: 2 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATLQCPR*KKGSKQ
Trigger: TTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAA...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR TCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCCTGTATGTTGCACATTaGATCATACTTTCAGAACCC +
Preference number: 2 (lower is better)
Translates to: NSNIAFSILCLNITHLQVLYVAH*IILSEP
Trigger: GGGTTCTGAAAGTATGATTCAATGTGCAACATACAG...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCCAAATATCTTCAACATaGAAGAAGTTGGGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: CMLHIESYFQNPSETIPLQISST*KKLGEE
Trigger: TTCTTCCCCCAACTTCTTGCATGTTGAAGATATTTG...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR TCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTTATAGATCTTACAGATaGGCAAGCATTCAGGCCTTA +
Preference number: 2 (lower is better)
Translates to: CLNITHLQVFQVLMQQECYRSYR*ASIQAL
Trigger: TAAGGCCTGAATGCTTGCTCATCTGTAAGATCTATA...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR TCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCCTGTATGTTGCACATTaGATCATACTTTCAGAACCC +
Preference number: 2 (lower is better)
Translates to: FMITMSQVEKGKQAIQITLYVAH*IILSEP
Trigger: GGGTTCTGAAAGTATGATTCAATGTGCAACATACAG...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTAATTTAAAGCACAGATaGCATCTTCCTCTGCAAAAC +
Preference number: 2 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFNLKHR*HLPLQN
Trigger: GTTTTGCAGAGGAAGATGGCATCTGTGCTTTAAATT...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAAATTTAAAGCACAGATaGCATCTTCCTCTGCAAAAC +
Preference number: 2 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATNLKHR*HLPLQN
Trigger: GTTTTGCAGAGGAAGATGGCATCTGTGCTTTAAATT...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR GCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGCTAGATTTCAGCTGTaGTCAGGCCATAATAGTTTT +
Preference number: 2 (lower is better)
Translates to: CLNITHLQVFQVLMQQECARFQL*SGHNSF
Trigger: AAAACTATTATGGCCTGAGCACAGCTGAAATCTAGC...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATCAGCAGCTGTCTGGATaGAAAATTAATTTCACAGAT +
Preference number: 2 (lower is better)
Translates to: KATNLLDEKSTQRIVREDQQLSG*KINFTD
Trigger: ATCTGTGAAATTAATTTTCCATCCAGACAGCTGCTG...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CCA 72 bp TCCTTTCGAAAACTCCGCCTTCTGACACGGGACCACTaGAGCGCGGGGAGCATGCATCAAGGGTCCGTGGCA +
Preference number: 3 (lower is better)
Translates to: SFRKLRLLTRDH*SAGSMHQGSVA
Trigger: TGCCACGGACCCTTGATGCATGCTCCCCGCGCTCCAGTGGTCCCGTGTCAGAAGGCGGAGTTTTCGAAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475004.6
3UTR CCA 72 bp GACATCTTCCACATCGATGCACACTCCCTCCTCCTTTaGGAAACCGCTGCAGCCGATCCCGTCTCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: DIFHIDAHSLLL*ETAAADPVSLP
Trigger: AGGCAAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGTGCATCGATGTGGAAGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475004.6
3UTR GCA 72 bp CCACTTGCTTGCCCAGAGACCTTTCCCTCAAACAGATaGTTTCAAGAGCTGCGAGAGAGTAGGGCATCCCTT +
Preference number: 3 (lower is better)
Translates to: PLACPETFPSNR*FQELRESRASL
Trigger: AAGGGATGCCCTACTCTCTCGCAGCTCTTGAAAGCATCTGTTTGAGGGAAAGGTCTCTGGGCAAGCAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR GCA 72 bp CATCGATGCACACTCCCTCCTCCTTTGGGAAACCGCTaGAGCCGATCCCGTCTCTTTGCCTTTTATTTTTGG +
Preference number: 3 (lower is better)
Translates to: HRCTLPPPLGNR*SRSRLFAFYFW
Trigger: CCAAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGTGCATCGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475004.6
3UTR-3UTR CAA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCGGGGAACACTTTGGTTaGAAAGCACAGAGCAGTTTG +
Preference number: 3 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCGEHFG*KAQSSL
Trigger: CAAACTGCTCTGTGCTTTCAAACCAAAGTGTTCCCC...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CCA 72 bp ACAACAGACTGGCCAGTGCTTAGACAAATTTGGGGTTaGGGGGAACACTTTGGTTTGAAAGCACAGAGCAGT +
Preference number: 3 (lower is better)
Translates to: TTDWPVLRQIWG*GEHFGLKAQSS
Trigger: ACTGCTCTGTGCTTTCAAACCAAAGTGTTCCCCCCAACCCCAAATTTGTCTAAGCACTGGCCAGTCTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCACAGGGCAATCCCTCTTaGTTTTCTAACCCAGTAATG +
Preference number: 3 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPQGNPS*FSNPVM
Trigger: CATTACTGGGTTAGAAAACAAAGAGGGATTGCCCTG...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCACCAGACTGGATCATTTaGGTGGGCAGAAGAAACCTG +
Preference number: 3 (lower is better)
Translates to: THLQVFQVLMQQECVWRPPDWII*VGRRNL
Trigger: CAGGTTTCTTCTGCCCACCAAAATGATCCAGTCTGG...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTGTTCAAGGTAACTTaGCCAAAAGGGCAGAGTAGG +
Preference number: 3 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFLFKVT*PKGQSR
Trigger: CCTACTCTGCCCTTTTGGCAAAGTTACCTTGAACAA...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAAGAGTAGGGCATCCCTaGTGGTGGTACCTCTATGTT +
Preference number: 3 (lower is better)
Translates to: THLQVFQVLMQQECVWRPRVGHP*WWYLYV
Trigger: AACATAGAGGTACCACCACAAGGGATGCCCTACTCT...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATCAAATAACCACTTGCTaGCCCAGAGACCTTTCCCTC +
Preference number: 3 (lower is better)
Translates to: KATNLLDEKSTQRIVREDQITTC*PRDLSL
Trigger: GAGGGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTG...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATGGGAGAAGCAGCCCATaGCTTAATACATTGGAACCC +
Preference number: 3 (lower is better)
Translates to: KATNLLDEKSTQRIVREDGRSSP*LNTLEP
Trigger: GGGTTCCAATGTATTAAGCAATGGGCTGCTTCTCCC...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCCCAGACTGGATCATTTaGGTGGGCAGAAGAAACCTG +
Preference number: 3 (lower is better)
Translates to: FMITMSQVEKGKQAIQITPDWII*VGRRNL
Trigger: CAGGTTTCTTCTGCCCACCAAAATGATCCAGTCTGG...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATGGGGAACACTTTGGTTaGAAAGCACAGAGCAGTTTG +
Preference number: 3 (lower is better)
Translates to: KATNLLDEKSTQRIVREDGEHFG*KAQSSL
Trigger: CAAACTGCTCTGTGCTTTCAAACCAAAGTGTTCCCC...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGGGAGAAGCAGCCCATaGCTTAATACATTGGAACCC +
Preference number: 3 (lower is better)
Translates to: CLNITHLQVFQVLMQQECGRSSP*LNTLEP
Trigger: GGGTTCCAATGTATTAAGCAATGGGCTGCTTCTCCC...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATTTGTTCAAGGTAACTTaGCCAAAAGGGCAGAGTAGG +
Preference number: 3 (lower is better)
Translates to: KATNLLDEKSTQRIVREDLFKVT*PKGQSR
Trigger: CCTACTCTGCCCTTTTGGCAAAGTTACCTTGAACAA...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAAGACCTACCTGTATGTaGCACATTGAATCATACTTT +
Preference number: 3 (lower is better)
Translates to: VTDMEAEELNSARFQLCSRPTCM*HIESYF
Trigger: AAAGTATGATTCAATGTGCAACATACAGGTAGGTCT...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAAATCCAAATAACCACTaGCTTGCCCAGAGACCTTTC +
Preference number: 3 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATNPNNH*LAQRPF
Trigger: GAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGATT...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CCA 72 bp CAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTaGAGACCAGCAAGAACATCAATAGAGAGCACTGAT +
Preference number: 3 (lower is better)
Translates to: QVFQVLMQQECV*RPARTSIESTD
Trigger: ATCAGTGCTCTCTATTGATGTTCTTGCTGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCAACCCTTTCCCTAAGTaGAGTTTCAACCATGAATGC +
Preference number: 3 (lower is better)
Translates to: NSNIAFSILCLNITHLQVNPFPK*SFNHEC
Trigger: GCATTCATGGTTGAAACTCAACTTAGGGAAAGGGTT...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATTCAACATGCAAGAAGTaGGGGGAAGAAATTAATCTC +
Preference number: 3 (lower is better)
Translates to: KATNLLDEKSTQRIVREDSTCKK*GEEINL
Trigger: GAGATTAATTTCTTCCCCCAACTTCTTGCATGTTGA...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCTCAACATGCAAGAAGTaGGGGGAAGAAATTAATCTC +
Preference number: 3 (lower is better)
Translates to: NSNIAFSILCLNITHLQVSTCKK*GEEINL
Trigger: GAGATTAATTTCTTCCCCCAACTTCTTGCATGTTGA...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR TCA 72 bp ACTGGATCATTTTGGTGGGCAGAAGAAACCTGGCAGTaGATTCTAACTAATCTGCATGAAAAGACAAATCAC +
Preference number: 3 (lower is better)
Translates to: TGSFWWAEETWQ*ILTNLHEKTNH
Trigger: GTGATTTGTCTTTTCATGCAGATTAGTTAGAATTCACTGCCAGGTTTCTTCTGCCCACCAAAATGATCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR-3UTR CAA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCCCTGTATGTTGCACATaGAATCATACTTTCAGAACC +
Preference number: 3 (lower is better)
Translates to: FMITMSQVEKGKQAIQITPVCCT*NHTFRT
Trigger: GGTTCTGAAAGTATGATTCAATGTGCAACATACAGG...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR GCA 72 bp CAAACTAAGAATAGTAACATAGCTTTCAGCATCCTGTaGCTGAACATCACACATCTACAAGTCTTTCAAGTC +
Preference number: 3 (lower is better)
Translates to: QTKNSNIAFSIL*LNITHLQVFQV
Trigger: GACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATTCTTAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR TCA 72 bp GTCAAAGTTTTTACATGCATATATTTCAGCTTATGCTaGAGACCTACCTGTATGTTGCACATTGAATCATAC +
Preference number: 3 (lower is better)
Translates to: VKVFTCIYFSLC*RPTCMLHIESY
Trigger: GTATGATTCAATGTGCAACATACAGGTAGGTCTTCAGCATAAGCTGAAATATATGCATGTAAAAACTTTGAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp AAAACTCCGCCTTCTGACACGGGACCACTGGAGCGCGGGGAGCATGCATCAAGGGAAAACTCCGCCTTCTaGCACGGGACCACTGGAGCG +
Preference number: 4 (lower is better)
Translates to: KTPPSDTGPLERGEHASRENSAF*HGTTGA
Trigger: CGCTCCAGTGGTCCCGTGTCAGAAGGCGGAGTTTTC...CCTTGATGCATGCTCCCCGCGCTCCAGTGGTCCCGTGTCAGAAGGCGGAGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR GCA 90 bp GGACCACTGGAGCGCGGGGAGCATGCATCAAGGGTCCGTGGCAGTGAGAAGTCCCCTTTGGGAAACCGCTaGAGCCGATCCCGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GPLERGEHASRVRGSEKSPLGNR*SRSRLF
Trigger: AAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGG...GGACTTCTCACTGCCACGGACCCTTGATGCATGCTCCCCGCGCTCCAGTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR GCA 90 bp CTGGAGCGCGGGGAGCATGCATCAAGGGTCCGTGGCAGTGAGAAGTCCCCACACGTAGCCCCATTTGGTTaGCAAGCGCCGGAGAACCTA +
Preference number: 4 (lower is better)
Translates to: LERGEHASRVRGSEKSPHVAPFG*QAPENL
Trigger: TAGGTTCTCCGGCGCTTGGCAACCAAATGGGGCTAC...GTGTGGGGACTTCTCACTGCCACGGACCCTTGATGCATGCTCCCCGCGCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR CCA 90 bp TGGAGCGCGGGGAGCATGCATCAAGGGTCCGTGGCAGTGAGAAGTCCCCACACACTCTGTAGCCCCATTTaGTTGCCAAGCGCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: WSAGSMHQGSVAVRSPHTLCSPI*LPSAGE
Trigger: TTCTCCGGCGCTTGGCAACCAAATGGGGCTACAGAG...TGTGTGGGGACTTCTCACTGCCACGGACCCTTGATGCATGCTCCCCGCGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR CCA 90 bp CGAAAACTCCGCCTTCTGACACGGGACCACTGGAGCGCGGGGAGCATGCATCAACACTCCCTCCTCCTTTaGGAAACCGCTGCAGCCGAT +
Preference number: 4 (lower is better)
Translates to: RKLRLLTRDHWSAGSMHQHSLLL*ETAAAD
Trigger: ATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTG...TTGATGCATGCTCCCCGCGCTCCAGTGGTCCCGTGTCAGAAGGCGGAGTTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR TCA 90 bp TGGAGCGCGGGGAGCATGCATCAAGGGTCCGTGGCAGTGAGAAGTCCCCACACACACACGCTCGCTCTGTaGACTGGCTTAGATGCTTCT +
Preference number: 4 (lower is better)
Translates to: WSAGSMHQGSVAVRSPHTHTLAL*TGLDAS
Trigger: AGAAGCATCTAAGCCAGTTCACAGAGCGAGCGTGTG...TGTGTGGGGACTTCTCACTGCCACGGACCCTTGATGCATGCTCCCCGCGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR GCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCATCAGTGGCTGTGGCTaGTGCCCAGACCGGCCTATC +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSISGCG*CPDRPI
Trigger: GATAGGCCGGTCTGGGCAGCAGCCACAGCCACTGAT...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAGGGCTCGGGAGGGCCTaGGGCTCCGGTCTGGTGACG +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSGLGRA*GSGLVT
Trigger: CGTCACCAGACCGGAGCCGCAGGCCCTCCCGAGCCC...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCGGTGCCATAAGCAGCTaGCCCATAGGTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSGAISS*PIGALT
Trigger: GGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACC...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTGCGGCTCCGGTCTGGTaGCGACCGATGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAAAPVW*RPMAAA
Trigger: CGCCGCCGCCATCGGTCGTCACCAGACCGGAGCCGC...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCGGGCTCGGGAGGGCCTaGGGCTCCGGTCTGGTGACG +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFGLGRA*GSGLVT
Trigger: CGTCACCAGACCGGAGCCGCAGGCCCTCCCGAGCCC...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GCGGGGAGCATGCATCAAGGGTCCGTGGCAGTGAGAAGTCCCCACACACGCTCGGTGAACTGGCTTAGATaGTTCTCTGTAGCCCCATTT +
Preference number: 4 (lower is better)
Translates to: AGSMHQGSVAVRSPHTRSVNWLR*FSVAPF
Trigger: AAATGGGGCTACAGAGAAGCATCTAAGCCAGTTCAC...CGAGCGTGTGTGGGGACTTCTCACTGCCACGGACCCTTGATGCATGCTCCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR GCA 90 bp AAAACTCCGCCTTCTGACACGGGACCACTGGAGCGCGGGGAGCATGCATCAAGGCATCTTCCACATCGATaGACACTCCCTCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KTPPSDTGPLERGEHASRHLPHR*TLPPPL
Trigger: CAAAGGAGGAGGGAGTGTGCATCGATGTGGAAGATG...CCTTGATGCATGCTCCCCGCGCTCCAGTGGTCCCGTGTCAGAAGGCGGAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR CCA 90 bp GCTGCAGCCGATCCCGTCTCTTTGCCTTTTATTTTTGGCGGCCTCCTTTCGAAACTGACACGGGACCACTaGAGCGCGGGGAGCATGCAT +
Preference number: 4 (lower is better)
Translates to: AAADPVSLPFIFGGLLSKLTRDH*SAGSMH
Trigger: ATGCATGCTCCCCGCGCTCCAGTGGTCCCGTGTCAG...TTTCGAAAGGAGGCCGCCAAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR TCA 90 bp ACACGGGACCACTGGAGCGCGGGGAGCATGCATCAAGGGTCCGTGGCAGTGAGAGTGCACATAATCCTCTaGGCTGTTTGGATAGTCATA +
Preference number: 4 (lower is better)
Translates to: TRDHWSAGSMHQGSVAVRVHIIL*AVWIVI
Trigger: TATGACTATCCAAACAGCTCAGAGGATTATGTGCAC...TCTCACTGCCACGGACCCTTGATGCATGCTCCCCGCGCTCCAGTGGTCCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR GCA 90 bp AGCATGCATCAAGGGTCCGTGGCAGTGAGAAGTCCCCACACACGCTCGCTCTGTCCGATCCCGTCTCTTTaGCTTTTATTTTTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SMHQGSVAVRSPHTRSLCPIPSL*LLFLAA
Trigger: GGCCGCCAAAAATAAAAGGCAAAGAGACGGGATCGG...ACAGAGCGAGCGTGTGTGGGGACTTCTCACTGCCACGGACCCTTGATGCATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR GCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGAGTGGCTGTGGCTGCTaGCCAGACCGGCCTATCCCA +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGSGCGC*PDRPIP
Trigger: TGGGATAGGCCGGTCTGGGCAGCAGCCACAGCCACT...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCATCAGTGGCTGTGGCTaGTGCCCAGACCGGCCTATC +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCISGCG*CPDRPI
Trigger: GATAGGCCGGTCTGGGCAGCAGCCACAGCCACTGAT...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCAGCCTCCTCCGCGCATaGTCCCAAAAGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSSLLRA*SQKDRD
Trigger: ATCTCTATCCTTTTGGGACCATGCGCGGAGGAGGCT...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCAGGCGGTACCCTTGTTaGTGCTACGGGCTGTTCGGC +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCRRYPC*CYGLFG
Trigger: GCCGAACAGCCCGTAGCACCAACAAGGGTACCGCCT...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCCCGCCGCCTCCTCTGTaGTCCACAAGCTGCATCAGT +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCPPPPL*STSCIS
Trigger: ACTGATGCAGCTTGTGGACCACAGAGGAGGCGGCGG...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCGAGCTGTATAGCTACTaGTGCCATAAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSELYSY*CHKQLP
Trigger: GGGCAGCTGCTTATGGCACCAGTAGCTATACAGCTC...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGCGGCTCCGGTCTGGTaGCGACCGATGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECAAPVW*RPMAAA
Trigger: CGCCGCCGCCATCGGTCGTCACCAGACCGGAGCCGC...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGGAGCGCGGGGAGCATGCATCAAGGGTCCGTGGCAGTGAGAAGTCCCCACACACAATCTCTTTCTGGTTaGCTCTTGTCTCCATGGATA +
Preference number: 4 (lower is better)
Translates to: WSAGSMHQGSVAVRSPHTQSLSG*LLSPWI
Trigger: TATCCATGGAGACAAGAGTCAACCAGAAAGAGATTG...TGTGTGGGGACTTCTCACTGCCACGGACCCTTGATGCATGCTCCCCGCGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR GCA 90 bp AGCATGCATCAAGGGTCCGTGGCAGTGAGAAGTCCCCACACACGCTCGCTCTGTAGCAATAAGGATGGGTaGCTTTCCAGAACGGAACTC +
Preference number: 4 (lower is better)
Translates to: SMHQGSVAVRSPHTRSLCSNKDG*LSRTEL
Trigger: GAGTTCCGTTCTGGAAAGGCACCCATCCTTATTGCT...ACAGAGCGAGCGTGTGTGGGGACTTCTCACTGCCACGGACCCTTGATGCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR CCA 90 bp TTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCCTATCTGGTGACGACCGATaGCGGCGGCGCCTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LHIESYFQNPSETIPLSLSGDDR*RRRLRC
Trigger: ACAGCGGAGGCGCCGCCGCCATCGGTCGTCACCAGA...TAGGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCGGAGGATGTTGTGGTTaGCACTCAACTCCAGATTGC +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSGGCCG*HSTPDC
Trigger: GCAATCTGGAGTTGAGTGCCAACCACAACATCCTCC...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TTTCGAAAACTCCGCCTTCTGACACGGGACCACTGGAGCGCGGGGAGCATGCATGCTCGCTCTGTGAACTaGCTTAGATGCTTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: FRKLRLLTRDHWSAGSMHARSVN*LRCFSV
Trigger: TACAGAGAAGCATCTAAGCCAGTTCACAGAGCGAGC...ATGCATGCTCCCCGCGCTCCAGTGGTCCCGTGTCAGAAGGCGGAGTTTTCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR TCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCTTTGGATTGATAGCCTaGTTGGCCTCTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSFGLIA*LASSST
Trigger: AGTGCTGGAAGAGGCCAATCAGGCTATCAATCCAAA...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCCGGTCACACTCATCCTaGTACATCAGATTGGGATTG +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSRSHSS*YIRLGL
Trigger: CAATCCCAATCTGATGTATCAGGATGAGTGTGACCG...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAGCCGGTGGGCAGGTTTaGCTACGCTCAAACCGGGCA +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSAGGQV*LRSNRA
Trigger: TGCCCGGTTTGAGCGTAGCCAAACCTGCCCACCGGC...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGGTGGTTTCATTTACGTaGAGGAGGAGGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGVVSFT*RRRRGR
Trigger: CCTCCCCCTCCTCCTCCTTCACGTAAATGAAACCAC...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCCTACCTGTAATAAGCTaGGTGCAAAAGGATGCCGAA +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSLPVIS*VQKDAE
Trigger: TTCGGCATCCTTTTGCACTCAGCTTATTACAGGTAG...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCGCTCAAACCGGGCAGTaGCGCGGTTTAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFAQTGQ*RGLGVS
Trigger: GGAGACGCCTAAACCGCGGCACTGCCCGGTTTGAGC...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGGCCACCTGCTGTACTTaGTGGGCAAGCTCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGATCCT*WASSLV
Trigger: TACCAGAGAGCTTGCCCAGCAAGTACAGCAGGTGGC...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCGATGCTTTCAAGAGCTaGGAGAGAGTAGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCDAFKS*ERVGHP
Trigger: GGGATGCCCTACTCTCTCGCAGCTCTTGAAAGCATC...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCGGAGAAGCAGCCCATTaGTTAATACATTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSGEAAH*LIHWNP
Trigger: AGGGTTCCAATGTATTAAGCAATGGGCTGCTTCTCC...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCTCCCTGGCACTGAATTaGAGTTGGTTCTGTAAAGTG +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSSLALN*SWFCKV
Trigger: CACTTTACAGAACCAACTCCAATTCAGTGCCAGGGA...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCACCTGCTGTACTTGCTaGGCAAGCTCTCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCTCCTC*ASSLVG
Trigger: TCCTACCAGAGAGCTTGCCCAGCAAGTACAGCAGGT...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCGCCGGTGGGCAGGTTTaGCTACGCTCAAACCGGGCA +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLAGGQV*LRSNRA
Trigger: TGCCCGGTTTGAGCGTAGCCAAACCTGCCCACCGGC...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCGGGCTACAAAGCCGGTaGGCAGGTTTGGCTACGCTC +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFGLQSR*AGLATL
Trigger: GAGCGTAGCCAAACCTGCCCACCGGCTTTGTAGCCC...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCGGAGGATGTTGTGGTTaGCACTCAACTCCAGATTGC +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCGGCCG*HSTPDC
Trigger: GCAATCTGGAGTTGAGTGCCAACCACAACATCCTCC...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCTTACAATGTCCCAGGTaGAAAAAGGGAAGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSLQCPR*KKGSKQ
Trigger: TTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAA...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCATTCCCAGAGCCAGTCTaGGCAATGCCCACCATATCC +
Preference number: 4 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPFPEPV*AMPTIS
Trigger: GGATATGGTGGGCATTGCTCAGACTGGCTCTGGGAA...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGCTCAAACCGGGCAGTaGCGCGGTTTAGGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATAQTGQ*RGLGVS
Trigger: GGAGACGCCTAAACCGCGGCACTGCCCGGTTTGAGC...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCTTCTTTTGGCCAGGTTaGACTCCACATCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCFFWPG*TPHQCL
Trigger: CAGACACTGATGTGGAGTGCAACCTGGCCAAAAGAA...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTTCCTTCCCAGCGACTaGACAAAATGGCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLFLPSD*TKWRPP
Trigger: CGGCGGCCGCCATTTTGTGCAGTCGCTGGGAAGGAA...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396821.8
CDS-3UTR CCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCAATGTTATTCCAGACTaGATCATTTTGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSNVIPD*IILVGR
Trigger: TCTGCCCACCAAAATGATCCAGTCTGGAATAACATT...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATAGCGACTGCACAAAATaGCGGCCGCCGCTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDSDCTK*RPPLSR
Trigger: CCGACTCAGCGGCGGCCGCCATTTTGTGCAGTCGCT...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396821.8
CDS-3UTR TCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCGGTCACACTCATCCTaGTACATCAGATTGGGATTG +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGRSHSS*YIRLGL
Trigger: CAATCCCAATCTGATGTATCAGGATGAGTGTGACCG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCATCCGGCCACCATCCTTaGCTCCTCGAAGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPSGHHP*LLEAFG
Trigger: ACCGAAGGCTTCGAGGAGTCAAGGATGGTGGCCGGA...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTTCCGGCCACCATCCTTaGCTCCTCGAAGCCTTCGGT +
Preference number: 4 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFSGHHP*LLEAFG
Trigger: ACCGAAGGCTTCGAGGAGTCAAGGATGGTGGCCGGA...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTAGCCAGTCTGAGCAATaGCCACCATATCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLASQSEQ*PPYPGH
Trigger: GTGGCCGGGATATGGTGGGCATTGCTCAGACTGGCT...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCCGGTACCCTTGTTGGTaGTACGGGCTGTTCGGCCAA +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLRYPCW*YGLFGQ
Trigger: TTGGCCGAACAGCCCGTAGCACCAACAAGGGTACCG...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCCTATCCCACTAAACTaGTGGCTAGAGCTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGPIPLN*WLELCE
Trigger: TTCACAGAGCTCTAGCCAGCAGTTTAGTGGGATAGG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTAGTGGCTGTGGCTGCTaGCCAGACCGGCCTATCCCA +
Preference number: 4 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLISGCGC*PDRPIP
Trigger: TGGGATAGGCCGGTCTGGGCAGCAGCCACAGCCACT...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAGCCTTAGCCAAAGAATaGAGTGGAGCCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPALAKE*SGAFPL
Trigger: AAGGGGGAAGGCTCCACTGCATTCTTTGGCTAAGGC...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCTTTCCCTCAAACAGATaGTTTCAAGAGCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCFPSNR*FQELRE
Trigger: CTCTCGCAGCTCTTGAAAGCATCTGTTTGAGGGAAA...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCATCCAAATAACCACTTaGTTGCCCAGAGACCTTTCC +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCIQITT*LPRDLS
Trigger: GGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGAT...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAGGGCTACAAAGCCGGTaGGCAGGTTTGGCTACGCTC +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPGLQSR*AGLATL
Trigger: GAGCGTAGCCAAACCTGCCCACCGGCTTTGTAGCCC...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCAAAAGGATAGAGATCTaGGAGCGGGGCACGGATGGC +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFKRIEI*ERGTDG
Trigger: GCCATCCGTGCCCCGCTCCCAGATCTCTATCCTTTT...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGATCTGGAGGATGTTGTaGTTGGCACTCAACTCCAGA +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGIWRML*LALNSR
Trigger: TCTGGAGTTGAGTGCCAACCACAACATCCTCCAGAT...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCAGGCGGTACCCTTGTTaGTGCTACGGGCTGTTCGGC +
Preference number: 4 (lower is better)
Translates to: NSNIAFSILCLNITHLQVRRYPC*CYGLFG
Trigger: GCCGAACAGCCCGTAGCACCAACAAGGGTACCGCCT...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTCCGCCGCCTCCTCTGTaGTCCACAAGCTGCATCAGT +
Preference number: 4 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFPPPPL*STSCIS
Trigger: ACTGATGCAGCTTGTGGACCACAGAGGAGGCGGCGG...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCAGACTGGATCATTTTaGTGGGCAGAAGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGQTGSF*WAEETW
Trigger: CCAGGTTTCTTCTGCCCACCAAAATGATCCAGTCTG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCATGCCCACAACAGACTaGCCAGTGCTTAGACAAATT +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCMPTTD*PVLRQI
Trigger: AATTTGTCTAAGCACTGGCCAGTCTGTTGTGGGCAT...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAATTGGGATTGTTGGCTaGAGAAGTGGTCCGGTAACG +
Preference number: 4 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPIGIVG*RSGPVT
Trigger: CGTTACCGGACCACTTCTTCAGCCAACAATCCCAAT...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCACTTCTGCTCATGTTCTaGAGCCAACAGCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPLLLMF*SQQQNL
Trigger: CAGGTTCTGCTGTTGGCTTCAGAACATGAGCAGAAG...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTGCCACCTGCTGTACTTaGTGGGCAAGCTCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAATCCT*WASSLV
Trigger: TACCAGAGAGCTTGCCCAGCAAGTACAGCAGGTGGC...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTCGGTACCCTTGTTGGTaGTACGGGCTGTTCGGCCAA +
Preference number: 4 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFRYPCW*YGLFGQ
Trigger: TTGGCCGAACAGCCCGTAGCACCAACAAGGGTACCG...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTACGATCCCGATAGCTTaGAGAGTCTCTCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFTIPIA*RVSPAT
Trigger: GGTGGCCGGAGAGACTCTGCAAGCTATCGGGATCGT...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATACGATCCCGATAGCTTaGAGAGTCTCTCCGGCCACC +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDTIPIA*RVSPAT
Trigger: GGTGGCCGGAGAGACTCTGCAAGCTATCGGGATCGT...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTGGTGCCATAAGCAGCTaGCCCATAGGTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFGAISS*PIGALT
Trigger: GGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACC...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGTTTCCCTCAAACAGATaGTTTCAAGAGCTGCGAGAG +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGFPSNR*FQELRE
Trigger: CTCTCGCAGCTCTTGAAAGCATCTGTTTGAGGGAAA...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCATCCATTACATATTGTaGGAAGTTAGCATGATGGAA +
Preference number: 4 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSIHYIL*EVSMME
Trigger: TTCCATCATGCTAACTTCCCACAATATGTAATGGAT...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCCCTGATACATCAGATTaGGATTGTTGGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCPDTSD*DCWLKK
Trigger: CTTCTTCAGCCAACAATCCCAATCTGATGTATCAGG...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCGTCCCATATCAGATCTaGAAGGGGTTTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFVPYQI*KGFLGL
Trigger: CAGCCCCAGAAACCCCTTCCAGATCTGATATGGGAC...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAAGCCAAAGAATGCAGTaGAGCCTTCCCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSSQRMQ*SLPPST
Trigger: AGTTGAAGGGGGAAGGCTCCACTGCATTCTTTGGCT...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCAATCTCTTTCTGGTTaGCTCTTGTCTCCATGGATA +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGQSLSG*LLSPWI
Trigger: TATCCATGGAGACAAGAGTCAACCAGAAAGAGATTG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTTAGGTTCCCTGGGGTaGAGAAGGTATAGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLLGSLG*RRYRRY
Trigger: GTACCGCCTATACCTTCTTCACCCCAGGGAACCTAA...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCGTTTCTGGGGCTGTCTaGTGTCCCTATCCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFVSGAV*CPYPVV
Trigger: TACAACAGGATAGGGACATCAGACAGCCCCAGAAAC...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCCTGTATGTTGCACATTaGATCATACTTTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCLYVAH*IILSEP
Trigger: GGGTTCTGAAAGTATGATTCAATGTGCAACATACAG...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCGCCACCACCACCTCTTaGTCCAAATCCTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITATTTS*SKSSTV
Trigger: GACCGTGGAGGATTTGGAGCAAGAGGTGGTGGTGGC...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCCTGGCCAACCATCTCTaGGCATCCTTCGAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLLANHL*ASFESD
Trigger: ATCTGACTCGAAGGATGCGCAGAGATGGTTGGCCAG...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAAGCAATAAGGATGGGTaGCTTTCCAGAACGGAACTC +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSSNKDG*LSRTEL
Trigger: GAGTTCCGTTCTGGAAAGGCACCCATCCTTATTGCT...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCCTGTATAGCTACTGGTaGCATAAGCAGCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFLYSYW*HKQLPH
Trigger: ATGGGGCAGCTGCTTATGGCACCAGTAGCTATACAG...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGATGCCGAAGAAAATCTaGACCCAGAAGCTGTTAGAA +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGMPKKI*TQKLLE
Trigger: TTCTAACAGCTTCTGGGTGCAGATTTTCTTCGGCAT...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCACCTGCTGTACTTGCTaGGCAAGCTCTCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLTCCTC*ASSLVG
Trigger: TCCTACCAGAGAGCTTGCCCAGCAAGTACAGCAGGT...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCCTATCAGACGTCCAGGAGTaGCTATGCAGATCTCAACAC +
Preference number: 4 (lower is better)
Translates to: LHIESYFQNPSETIPLSLSDVQE*LCRSQH
Trigger: GTGTTGAGATCTGCATAGCCACTCCTGGACGTCTGA...TAGGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGTCACCTACCTTCAGATaGAGGAAAAGTGAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGSPTFR*RKSEKD
Trigger: GTCCTTTTCACTTTTCCTCCATCTGAAGGTAGGTGA...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTTCTGGAAGGGGTTTCTaGGGCTGTCTGATGTCCCTA +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLASGRGF*GCLMSL
Trigger: TAGGGACATCAGACAGCCCCAGAAACCCCTTCCAGA...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CAA 72 bp GGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCACTaGCTTGCCCAGAGACCTTTCCCTCAAACAGATGCT +
Preference number: 4 (lower is better)
Translates to: GGKREASNPNNH*LAQRPFPQTDA
Trigger: AGCATCTGTTTGAGGGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGATTGCTTGCTTCCCTTTTTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTTGTGGGAAGTTAGCATaGTGGAAGGCAAACACGGGT +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLACGKLA*WKANTG
Trigger: ACCCGTGTTTGCCTTCCATCATGCTAACTTCCCACA...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTTTCCCAGAGCCAGTCTaGGCAATGCCCACCATATCC +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECFPEPV*AMPTIS
Trigger: GGATATGGTGGGCATTGCTCAGACTGGCTCTGGGAA...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACATTAGGTTCCCTGGGGTaGAGAAGGTATAGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATLGSLG*RRYRRY
Trigger: GTACCGCCTATACCTTCTTCACCCCAGGGAACCTAA...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTGGATTGATAGCCTaGTTGGCCTCTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFFGLIA*LASSST
Trigger: AGTGCTGGAAGAGGCCAATCAGGCTATCAATCCAAA...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTGGTTTCATTTACGTaGAGGAGGAGGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECVVSFT*RRRRGR
Trigger: CCTCCCCCTCCTCCTCCTTCACGTAAATGAAACCAC...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCCTAGTATTGGCCTGCTTGTaGTCCAAAGGCAGAATTTGG +
Preference number: 4 (lower is better)
Translates to: LHIESYFQNPSETIPLSLVLACL*SKGRIW
Trigger: CCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATAC...TAGGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCAATTTAAAGCACAGATaGCATCTTCCTCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCNLKHR*HLPLQN
Trigger: GTTTTGCAGAGGAAGATGGCATCTGTGCTTTAAATT...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCAAAAGGATAGAGATCTaGGAGCGGGGCACGGATGGC +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITKRIEI*ERGTDG
Trigger: GCCATCCGTGCCCCGCTCCCAGATCTCTATCCTTTT...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAAGCCTCCTCCGCGCATaGTCCCAAAAGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPSLLRA*SQKDRD
Trigger: ATCTCTATCCTTTTGGGACCATGCGCGGAGGAGGCT...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCAAGTCTCGAATCTaGGGACCTTTAGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLSKSRI*GPLGAP
Trigger: AGGTGCTCCTAAAGGTCCCCAGATTCGAGACTTGGA...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTTCCAAGTCTCGAATCTaGGGACCTTTAGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLASKSRI*GPLGAP
Trigger: AGGTGCTCCTAAAGGTCCCCAGATTCGAGACTTGGA...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCTATCAGGCCTGATTTaGTCAACAATTTTACGGATC +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGLSGLI*STILRI
Trigger: GATCCGTAAAATTGTTGACCAAATCAGGCCTGATAG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCATGGATACACATAGCTaGCCAACCATCTCTGCGCAT +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFMDTHS*PTISAH
Trigger: ATGCGCAGAGATGGTTGGCCAGCTATGTGTATCCAT...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCCTATCCAAAGGCAGAATTTaGACTTCCATAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LHIESYFQNPSETIPLSLSKGRI*TSIATA
Trigger: GGCAGTGGCTATGGAAGTCCAAATTCTGCCTTTGGA...TAGGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCGAGCTGTATAGCTACTaGTGCCATAAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: NSNIAFSILCLNITHLQVELYSY*CHKQLP
Trigger: GGGCAGCTGCTTATGGCACCAGTAGCTATACAGCTC...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCCTACAGACTGGATCATTTTaGTGGGCAGAAGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: LHIESYFQNPSETIPLSLQTGSF*WAEETW
Trigger: CCAGGTTTCTTCTGCCCACCAAAATGATCCAGTCTG...TAGGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGAAAGGGCAGAGTAGGTaGCAAAGAGTTGCTTTTAAT +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGKGQSR*QRVAFN
Trigger: ATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTT...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCGTCCCATATCAGATCTaGAAGGGGTTTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NSNIAFSILCLNITHLQVVPYQI*KGFLGL
Trigger: CAGCCCCAGAAACCCCTTCCAGATCTGATATGGGAC...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCATGTGGGAAGTTAGCATaGTGGAAGGCAAACACGGGT +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPCGKLA*WKANTG
Trigger: ACCCGTGTTTGCCTTCCATCATGCTAACTTCCCACA...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTGGAAATCCCTGGCACTaGATTGGAGTTGGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAGNPWH*IGVGSV
Trigger: TACAGAACCAACTCCAATTCAGTGCCAGGGATTTCC...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAAACCTGAATTATAAGTaGCAGACATGGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPNLNYK*QTWRQK
Trigger: CTTCTGCCTCCATGTCTGTCACTTATAATTCAGGTT...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAAACCTGAATTATAAGTaGCAGACATGGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSNLNYK*QTWRQK
Trigger: CTTCTGCCTCCATGTCTGTCACTTATAATTCAGGTT...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAGCCAACAGCAGAACCTaGATTATAAGTGACAGACAT +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSANSRT*IISDRH
Trigger: ATGTCTGTCACTTATAATTCAGGTTCTGCTGTTGGC...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAACCCTTTCCCTAAGTTaGGTTTCAACCATGAATGCA +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSTLSLS*VSTMNA
Trigger: TGCATTCATGGTTGAAACTCAACTTAGGGAAAGGGT...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTATATGGTGTCAGCCTTaGTACTTCCGGATGTTCCAC +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAIWCQP*YFRMFH
Trigger: GTGGAACATCCGGAAGTAGCAAGGCTGACACCATAT...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCACTCCACATCAGTGTCTaGCTATCAGGCCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPLHISV*LSGLIW
Trigger: CCAAATCAGGCCTGATAGGCAGACACTGATGTGGAG...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTCTGGCCAACCATCTCTaGGCATCCTTCGAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECLANHL*ASFESD
Trigger: ATCTGACTCGAAGGATGCGCAGAGATGGTTGGCCAG...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCCTGTATAGCTACTGGTaGCATAAGCAGCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: NSNIAFSILCLNITHLQVLYSYW*HKQLPH
Trigger: ATGGGGCAGCTGCTTATGGCACCAGTAGCTATACAG...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAATGCCGAAGAAAATCTaGACCCAGAAGCTGTTAGAA +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSMPKKI*TQKLLE
Trigger: TTCTAACAGCTTCTGGGTGCAGATTTTCTTCGGCAT...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCTTTCTGGGTCCATCTaGTATAAAGTCTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGLSGSI*YKVLVK
Trigger: TTTTACCAAGACTTTATAGCAGATGGACCCAGAAAG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGCCTTAGCCAAAGAATaGAGTGGAGCCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECALAKE*SGAFPL
Trigger: AAGGGGGAAGGCTCCACTGCATTCTTTGGCTAAGGC...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCCAACAGACTGGCCAGTaGTTAGACAAATTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFQQTGQ*LDKFGV
Trigger: AACCCCAAATTTGTCTAAGCACTGGCCAGTCTGTTG...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTGGTTGTAGAAAACAATaGCCACAACAGACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAGCRKQ*PQQTGQ
Trigger: CTGGCCAGTCTGTTGTGGGCATTGTTTTCTACAACC...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCGATGCTTTCAAGAGCTaGGAGAGAGTAGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITDAFKS*ERVGHP
Trigger: GGGATGCCCTACTCTCTCGCAGCTCTTGAAAGCATC...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAGCACTGAATTGGAGTTaGTTCTGTAAAGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPALNWS*FCKVLI
Trigger: GATCAGCACTTTACAGAACCAACTCCAATTCAGTGC...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCATCAGACGTCCAGGAGTaGCTATGCAGATCTCAACAC +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPSDVQE*LCRSQH
Trigger: GTGTTGAGATCTGCATAGCCACTCCTGGACGTCTGA...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACATGTTGGCTGAAGAAGTaGTCCGGTAACGAGAACGAC +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATCWLKK*SGNEND
Trigger: GTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACA...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTTGTTGGCTGAAGAAGTaGTCCGGTAACGAGAACGAC +
Preference number: 4 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFCWLKK*SGNEND
Trigger: GTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACA...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCAGATTGGGATTGTTaGCTGAAGAAGTGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLSDWDC*LKKWSG
Trigger: ACCGGACCACTTCTTCAGCCAACAATCCCAATCTGA...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCAGCAGCTGTCTGGATaGAAAATTAATTTCACAGAT +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGQQLSG*KINFTD
Trigger: ATCTGTGAAATTAATTTTCCATCCAGACAGCTGCTG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTAGCCAAAGAATGCAGTaGAGCCTTCCCCCTTCAACT +
Preference number: 4 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFSQRMQ*SLPPST
Trigger: AGTTGAAGGGGGAAGGCTCCACTGCATTCTTTGGCT...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCATTGCTTAATACATTaGAACCCTTTCCCTAAGTTG +
Preference number: 4 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGHCLIH*NPFPKL
Trigger: CAACTTAGGGAAAGGGTTCCAATGTATTAAGCAATG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CAA 72 bp GAAAAAGGGAAGCAAGCAATCCAAATAACCACTTGCTaGCCCAGAGACCTTTCCCTCAAACAGATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: EKGKQAIQITTC*PRDLSLKQMLS
Trigger: TGAAAGCATCTGTTTGAGGGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGATTGCTTGCTTCCCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACACCAGATTGCCTACGTTaGTCTGGGTGTAATCACGAA +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATPDCLR*SGCNHE
Trigger: TTCGTGATTACACCCAGATCAACGTAGGCAATCTGG...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCACCAGATTGCCTACGTTaGTCTGGGTGTAATCACGAA +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPPDCLR*SGCNHE
Trigger: TTCGTGATTACACCCAGATCAACGTAGGCAATCTGG...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCATTGGGATTGTTGGCTaGAGAAGTGGTCCGGTAACG +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITIGIVG*RSGPVT
Trigger: CGTTACCGGACCACTTCTTCAGCCAACAATCCCAAT...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAGAAGAAACCTGGCAGTaGATTCTAACTAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSEETWQ*ILTNLH
Trigger: ATGCAGATTAGTTAGAATTCACTGCCAGGTTTCTTC...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCCTACCTGTAATAAGCTaGGTGCAAAAGGATGCCGAA +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLLPVIS*VQKDAE
Trigger: TTCGGCATCCTTTTGCACTCAGCTTATTACAGGTAG...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTTTCTGGGGCTGTCTaGTGTCCCTATCCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECVSGAV*CPYPVV
Trigger: TACAACAGGATAGGGACATCAGACAGCCCCAGAAAC...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCACTGTATGTTGCACATTaGATCATACTTTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSLYVAH*IILSEP
Trigger: GGGTTCTGAAAGTATGATTCAATGTGCAACATACAG...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACATCAGCATCCTGTGCCTaGACATCACACATCTACAAG +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATSASCA*TSHIYK
Trigger: CTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGA...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAGTTAATATGAACAATTaGAGGCAGGAGATACGCCAA +
Preference number: 4 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPVNMNN*RQEIRQ
Trigger: TTGGCGTATCTCCTGCCTGCAATTGTTCATATTAAC...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTCTCCACATCAGTGTCTaGCTATCAGGCCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECLHISV*LSGLIW
Trigger: CCAAATCAGGCCTGATAGGCAGACACTGATGTGGAG...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCACTTTTTCACTTTCCATaGAGACATCCACTATCTGGA +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSLFHFP*RHPLSG
Trigger: TCCAGATAGTGGATGTCTGCATGGAAAGTGAAAAAG...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAATAGGTGTATTGGCCTaGTTGTGCTCCAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPIGVLA*LCSKGR
Trigger: TCTGCCTTTGGAGCACAAGCAGGCCAATACACCTAT...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATATAGGTGTATTGGCCTaGTTGTGCTCCAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDIGVLA*LCSKGR
Trigger: TCTGCCTTTGGAGCACAAGCAGGCCAATACACCTAT...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATCCTATCCCACTAAACTaGTGGCTAGAGCTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDPIPLN*WLELCE
Trigger: TTCACAGAGCTCTAGCCAGCAGTTTAGTGGGATAGG...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCGCTGTTAGAAAGCACTaGAGAGAACAGGGTATGAAG +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLAVRKH*REQGMK
Trigger: CTTCATACCCTGTTCTCTGCAGTGCTTTCTAACAGC...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCCTGAGTGCAAAAGGATaGCGAAGAAAATCTGCACCC +
Preference number: 4 (lower is better)
Translates to: NSNIAFSILCLNITHLQVLSAKG*RRKSAP
Trigger: GGGTGCAGATTTTCTTCGGCATCCTTTTGCACTCAG...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTAAGCACAGAGCAGTTTaGCATGTTTCTTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAKHRAV*HVSSVP
Trigger: AGGCACAGAAGAAACATGGCAAACTGCTCTGTGCTT...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCAAGCACAGAGCAGTTTaGCATGTTTCTTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLKHRAV*HVSSVP
Trigger: AGGCACAGAAGAAACATGGCAAACTGCTCTGTGCTT...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTGGAGAAGCAGCCCATTaGTTAATACATTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAGEAAH*LIHWNP
Trigger: AGGGTTCCAATGTATTAAGCAATGGGCTGCTTCTCC...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAAATTTTTCTCAAACTTaGGGAGCTCACTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSNFSQT*GAHSNP
Trigger: GGGATTTGAGTGAGCTCCCCAAGTTTGAGAAAAATT...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAATCTGGAGGATGTTGTaGTTGGCACTCAACTCCAGA +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPIWRML*LALNSR
Trigger: TCTGGAGTTGAGTGCCAACCACAACATCCTCCAGAT...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATTCAGATTGGGATTGTTaGCTGAAGAAGTGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDSDWDC*LKKWSG
Trigger: ACCGGACCACTTCTTCAGCCAACAATCCCAATCTGA...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATTCCAAAGGCAGAATTTaGACTTCCATAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDSKGRI*TSIATA
Trigger: GGCAGTGGCTATGGAAGTCCAAATTCTGCCTTTGGA...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCATCCCACTAAACTGCTaGCTAGAGCTCTGTGAACTT +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLIPLNC*LELCEL
Trigger: AAGTTCACAGAGCTCTAGCCAGCAGTTTAGTGGGAT...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAACTGGATCATTTTGGTaGGCAGAAGAAACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPTGSFW*AEETWQ
Trigger: CTGCCAGGTTTCTTCTGCCCACCAAAATGATCCAGT...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTCACCTACCTTCAGATaGAGGAAAAGTGAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFSPTFR*RKSEKD
Trigger: GTCCTTTTCACTTTTCCTCCATCTGAAGGTAGGTGA...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTCAACAGGAATGTGTCTaGAGACCAGCAAGAACATCA +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAQQECV*RPARTS
Trigger: TGATGTTCTTGCTGGTCTCCAGACACATTCCTGTTG...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CAA 72 bp TCAGCTTATGCTGAAGACCTACCTGTATGTTGCACATaGAATCATACTTTCAGAACCCCTCAGAAACCATCC +
Preference number: 4 (lower is better)
Translates to: SAYAEDLPVCCT*NHTFRTPQKPS
Trigger: GGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACAGGTAGGTCTTCAGCATAAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCGGAAATCCCTGGCACTaGATTGGAGTTGGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITGNPWH*IGVGSV
Trigger: TACAGAACCAACTCCAATTCAGTGCCAGGGATTTCC...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTGTGCACATAATCCTCTaGGCTGTTTGGATAGTCATA +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAVHIIL*AVWIVI
Trigger: TATGACTATCCAAACAGCTCAGAGGATTATGTGCAC...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCGGCTTTAGTCCTCCATaGCTTTTCTTAAGCACTACC +
Preference number: 4 (lower is better)
Translates to: NSNIAFSILCLNITHLQVGFSPP*LFLSTT
Trigger: GGTAGTGCTTAAGAAAAGTCATGGAGGACTAAAGCC...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTTCAGCATCCTGTGCCTaGACATCACACATCTACAAG +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECSASCA*TSHIYK
Trigger: CTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGA...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCATATGGTGTCAGCCTTaGTACTTCCGGATGTTCCAC +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITIWCQP*YFRMFH
Trigger: GTGGAACATCCGGAAGTAGCAAGGCTGACACCATAT...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTTTCTTTTGGCCAGGTTaGACTCCACATCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECFFWPG*TPHQCL
Trigger: CAGACACTGATGTGGAGTGCAACCTGGCCAAAAGAA...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCCTTTTTCACTTTCCATaGAGACATCCACTATCTGGA +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFLFHFP*RHPLSG
Trigger: TCCAGATAGTGGATGTCTGCATGGAAAGTGAAAAAG...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTAGCAATAAGGATGGGTaGCTTTCCAGAACGGAACTC +
Preference number: 4 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLISNKDG*LSRTEL
Trigger: GAGTTCCGTTCTGGAAAGGCACCCATCCTTATTGCT...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCCTGTGGTCCACAAGCTaGATCAGTTTTGGATTGATA +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLLWSTS*ISFGLI
Trigger: TATCAATCCAAAACTGATGCAGCTTGTGGACCACAG...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCGTATTGGCCTGCTTGTaGTCCAAAGGCAGAATTTGG +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITVLACL*SKGRIW
Trigger: CCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATAC...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTGCTGTTAGAAAGCACTaGAGAGAACAGGGTATGAAG +
Preference number: 4 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFAVRKH*REQGMK
Trigger: CTTCATACCCTGTTCTCTGCAGTGCTTTCTAACAGC...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTCTGAGTGCAAAAGGATaGCGAAGAAAATCTGCACCC +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECLSAKG*RRKSAP
Trigger: GGGTGCAGATTTTCTTCGGCATCCTTTTGCACTCAG...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCCCTTCCCCCTTCAACTaGATTGTGAATGAATACCAA +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLPSPFN*IVNEYQ
Trigger: TTGGTATTCATTCACAATGCAGTTGAAGGGGGAAGG...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCATCCAAATAACCACTTaGTTGCCCAGAGACCTTTCC +
Preference number: 4 (lower is better)
Translates to: NSNIAFSILCLNITHLQVIQITT*LPRDLS
Trigger: GGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGAT...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATCTCATCAACCTCATATaGTGTCAGCCTTGCTACTTC +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDLINLI*CQPCYF
Trigger: GAAGTAGCAAGGCTGACACCATATGAGGTTGATGAG...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCGCACTGAATTGGAGTTaGTTCTGTAAAGTGCTGATC +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLALNWS*FCKVLI
Trigger: GATCAGCACTTTACAGAACCAACTCCAATTCAGTGC...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACATCCCTGGCACTGAATTaGAGTTGGTTCTGTAAAGTG +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATSLALN*SWFCKV
Trigger: CACTTTACAGAACCAACTCCAATTCAGTGCCAGGGA...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCCTATCAGGCCTGATTTaGTCAACAATTTTACGGATC +
Preference number: 4 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFLSGLI*STILRI
Trigger: GATCCGTAAAATTGTTGACCAAATCAGGCCTGATAG...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAAGTTGGATCAACTTGTaGTCTTTTTCACTTTCCATG +
Preference number: 4 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPSWINL*SFSLSM
Trigger: CATGGAAAGTGAAAAAGACCACAAGTTGATCCAACT...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCATGGATACACATAGCTaGCCAACCATCTCTGCGCAT +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITMDTHS*PTISAH
Trigger: ATGCGCAGAGATGGTTGGCCAGCTATGTGTATCCAT...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAATCCCACTAAACTGCTaGCTAGAGCTCTGTGAACTT +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATIPLNC*LELCEL
Trigger: AAGTTCACAGAGCTCTAGCCAGCAGTTTAGTGGGAT...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTACTGGATCATTTTGGTaGGCAGAAGAAACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLITGSFW*AEETWQ
Trigger: CTGCCAGGTTTCTTCTGCCCACCAAAATGATCCAGT...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAAGACAAATTTGGGGTTaGGGGGAACACTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPRQIWG*GEHFGL
Trigger: CAAACCAAAGTGTTCCCCCCAACCCCAAATTTGTCT...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATATGCCCACAACAGACTaGCCAGTGCTTAGACAAATT +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDMPTTD*PVLRQI
Trigger: AATTTGTCTAAGCACTGGCCAGTCTGTTGTGGGCAT...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCACATTGCTTAATACATTaGAACCCTTTCCCTAAGTTG +
Preference number: 4 (lower is better)
Translates to: VTDMEAEELNSARFQLCSHCLIH*NPFPKL
Trigger: CAACTTAGGGAAAGGGTTCCAATGTATTAAGCAATG...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATCAATCTCTTTCTGGTTaGCTCTTGTCTCCATGGATA +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDQSLSG*LLSPWI
Trigger: TATCCATGGAGACAAGAGTCAACCAGAAAGAGATTG...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAGTGCACATAATCCTCTaGGCTGTTTGGATAGTCATA +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPVHIIL*AVWIVI
Trigger: TATGACTATCCAAACAGCTCAGAGGATTATGTGCAC...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTGGCTTTAGTCCTCCATaGCTTTTCTTAAGCACTACC +
Preference number: 4 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLIGFSPP*LFLSTT
Trigger: GGTAGTGCTTAAGAAAAGTCATGGAGGACTAAAGCC...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATACCCTTTCCCTAAGTTaGGTTTCAACCATGAATGCA +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDTLSLS*VSTMNA
Trigger: TGCATTCATGGTTGAAACTCAACTTAGGGAAAGGGT...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCGTTAATATGAACAATTaGAGGCAGGAGATACGCCAA +
Preference number: 4 (lower is better)
Translates to: CMLHIESYFQNPSETIPLVNMNN*RQEIRQ
Trigger: TTGGCGTATCTCCTGCCTGCAATTGTTCATATTAAC...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGCACAAAAGAAAATGTaGAGGGCAATCCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATAQKKM*RAIPLC
Trigger: ACAAAGAGGGATTGCCCTGCACATTTTCTTTTGTGC...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAACCCAGATGCTGAGATaGTACAGTTTAACCACTACA +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATTQMLR*YSLTTT
Trigger: TGTAGTGGTTAAACTGTAGCATCTCAGCATCTGGGT...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATACCCAGATGCTGAGATaGTACAGTTTAACCACTACA +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDTQMLR*YSLTTT
Trigger: TGTAGTGGTTAAACTGTAGCATCTCAGCATCTGGGT...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCCCTTCCCCCTTCAACTaGATTGTGAATGAATACCAA +
Preference number: 4 (lower is better)
Translates to: NSNIAFSILCLNITHLQVPSPFN*IVNEYQ
Trigger: TTGGTATTCATTCACAATGCAGTTGAAGGGGGAAGG...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTCTCATCAACCTCATATaGTGTCAGCCTTGCTACTTC +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECLINLI*CQPCYF
Trigger: GAAGTAGCAAGGCTGACACCATATGAGGTTGATGAG...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACATCCCCTTTCCAAGTATaGCTGGTGGTTAATATGAAC +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATSPFQV*LVVNMN
Trigger: GTTCATATTAACCACCAGCCATACTTGGAAAGGGGA...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAAAGCTGCATCAGTTTTaGATTGATAGCCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPKLHQF*IDSLIG
Trigger: GCCAATCAGGCTATCAATCCAAAACTGATGCAGCTT...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATAAGCTGCATCAGTTTTaGATTGATAGCCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDKLHQF*IDSLIG
Trigger: GCCAATCAGGCTATCAATCCAAAACTGATGCAGCTT...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATCCTGATACATCAGATTaGGATTGTTGGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDPDTSD*DCWLKK
Trigger: CTTCTTCAGCCAACAATCCCAATCTGATGTATCAGG...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTTCACTACCACTTGAGTaGTTTCATTTACGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLASLPLE*FHLREG
Trigger: TCCTTCACGTAAATGAAACCACTCAAGTGGTAGTGA...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTAGACAAATTTGGGGTTaGGGGGAACACTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECRQIWG*GEHFGL
Trigger: CAAACCAAAGTGTTCCCCCCAACCCCAAATTTGTCT...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTCAACAGGAATGTGTCTaGAGACCAGCAAGAACATCA +
Preference number: 4 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLIQQECV*RPARTS
Trigger: TGATGTTCTTGCTGGTCTCCAGACACATTCCTGTTG...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGGTTCTGTAAAGTGCTaGTCCATCAACACATCCATT +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECGSVKC*SINTSI
Trigger: AATGGATGTGTTGATGGATCAGCACTTTACAGAACC...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATTATAGATCTTACAGATaGGCAAGCATTCAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDYRSYR*ASIQAL
Trigger: TAAGGCCTGAATGCTTGCTCATCTGTAAGATCTATA...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTTATAGATCTTACAGATaGGCAAGCATTCAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFYRSYR*ASIQAL
Trigger: TAAGGCCTGAATGCTTGCTCATCTGTAAGATCTATA...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTGCCAACAGCAGAACCTaGATTATAAGTGACAGACAT +
Preference number: 4 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLIANSRT*IISDRH
Trigger: ATGTCTGTCACTTATAATTCAGGTTCTGCTGTTGGC...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTCAAATATCTTCAACATaGAAGAAGTTGGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAQISST*KKLGEE
Trigger: TTCTTCCCCCAACTTCTTGCATGTTGAAGATATTTG...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCGCACAAAAGAAAATGTaGAGGGCAATCCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITAQKKM*RAIPLC
Trigger: ACAAAGAGGGATTGCCCTGCACATTTTCTTTTGTGC...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATGCTAGATTTCAGCTGTaGTCAGGCCATAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDARFQL*SGHNSF
Trigger: AAAACTATTATGGCCTGAGCACAGCTGAAATCTAGC...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAGCTAGATTTCAGCTGTaGTCAGGCCATAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPARFQL*SGHNSF
Trigger: AAAACTATTATGGCCTGAGCACAGCTGAAATCTAGC...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAAATTTTTCTCAAACTTaGGGAGCTCACTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPNFSQT*GAHSNP
Trigger: GGGATTTGAGTGAGCTCCCCAAGTTTGAGAAAAATT...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTTCCCCTTTCCAAGTATaGCTGGTGGTTAATATGAAC +
Preference number: 4 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLISPFQV*LVVNMN
Trigger: GTTCATATTAACCACCAGCCATACTTGGAAAGGGGA...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCATCACTACCACTTGAGTaGTTTCATTTACGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPSLPLE*FHLREG
Trigger: TCCTTCACGTAAATGAAACCACTCAAGTGGTAGTGA...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTCAGCAGCTGTCTGGATaGAAAATTAATTTCACAGAT +
Preference number: 4 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAQQLSG*KINFTD
Trigger: ATCTGTGAAATTAATTTTCCATCCAGACAGCTGCTG...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTTTACAATGTCCCAGGTaGAAAAAGGGAAGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECLQCPR*KKGSKQ
Trigger: TTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAA...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGAAGAAACCTGGCAGTaGATTCTAACTAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECEETWQ*ILTNLH
Trigger: ATGCAGATTAGTTAGAATTCACTGCCAGGTTTCTTC...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTTATTTCAGCTTATGCTaGAGACCTACCTGTATGTTG +
Preference number: 4 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLIYFSLC*RPTCML
Trigger: CAACATACAGGTAGGTCTTCAGCATAAGCTGAAATA...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR TCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCTATTTCAGCTTATGCTaGAGACCTACCTGTATGTTG +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITYFSLC*RPTCML
Trigger: CAACATACAGGTAGGTCTTCAGCATAAGCTGAAATA...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATCAAATATCTTCAACATaGAAGAAGTTGGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDQISST*KKLGEE
Trigger: TTCTTCCCCCAACTTCTTGCATGTTGAAGATATTTG...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCCTTTCTGGGTCCATCTaGTATAAAGTCTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: NSNIAFSILCLNITHLQVLSGSI*YKVLVK
Trigger: TTTTACCAAGACTTTATAGCAGATGGACCCAGAAAG...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATGACCTACCTGTATGTTaGACATTGAATCATACTTTC +
Preference number: 4 (lower is better)
Translates to: KATNLLDEKSTQRIVREDDLPVC*TLNHTF
Trigger: GAAAGTATGATTCAATGTGCAACATACAGGTAGGTC...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAAGTTGGATCAACTTGTaGTCTTTTTCACTTTCCATG +
Preference number: 4 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATSWINL*SFSLSM
Trigger: CATGGAAAGTGAAAAAGACCACAAGTTGATCCAACT...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTAATGTTATTCCAGACTaGATCATTTTGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CLNITHLQVFQVLMQQECNVIPD*IILVGR
Trigger: TCTGCCCACCAAAATGATCCAGTCTGGAATAACATT...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAAGCCTGACACTAAAATaGTTATTTTTCAGTAACGGG +
Preference number: 4 (lower is better)
Translates to: THLQVFQVLMQQECVWRPSLTLK*LFFSNG
Trigger: CCCGTTACTGAAAAATAACCATTTTAGTGTCAGGCT...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
3UTR CAA 72 bp CAGAAAATTCTTTCTGGGTCCATCTGCTATAAAGTCTaGGTAAAACAGCATTACCATGAAGAGGATGAACTC +
Preference number: 4 (lower is better)
Translates to: QKILSGSICYKV*VKQHYHEEDEL
Trigger: GAGTTCATCCTCTTCATGGTAATGCTGTTTTACCAAGACTTTATAGCAGATGGACCCAGAAAGAATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR GCA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCAATTTAAAGCACAGATaGCATCTTCCTCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: FMITMSQVEKGKQAIQITNLKHR*HLPLQN
Trigger: GTTTTGCAGAGGAAGATGGCATCTGTGCTTTAAATT...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCATCCATTACATATTGTaGGAAGTTAGCATGATGGAA +
Preference number: 4 (lower is better)
Translates to: NSNIAFSILCLNITHLQVIHYIL*EVSMME
Trigger: TTCCATCATGCTAACTTCCCACAATATGTAATGGAT...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CCA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTAGCCTGACACTAAAATaGTTATTTTTCAGTAACGGG +
Preference number: 4 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLISLTLK*LFFSNG
Trigger: CCCGTTACTGAAAAATAACCATTTTAGTGTCAGGCT...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS CCA 90 bp GGCCGGGCTCGGGAGGGCCTGCGGCTCCGGTCTGGTGACGACCGATaGCGGCGGCGCCTCCGCTGTTGGGGCGGCGGCAGGCGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: GRAREGLRLRSGDDR*RRRLRCWGGGRRSA
Trigger: AGCGCTGCGCCTGCCGCCGCCCCAACAGCGGAGGCGCCGCCGCCATCGGTCGTCACCAGACCGGAGCCGCAGGCCCTCCCGAGCCCGGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS TCA 90 bp GGGCACGGATGGCCGGGCTCGGGAGGGCCTGCGGCTCCGGTCTGGTaGCGACCGATGGCGGCGGCGCCTCCGCTGTTGGGGCGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GHGWPGSGGPAAPVW*RPMAAAPPLLGRRQ
Trigger: CTGCCGCCGCCCCAACAGCGGAGGCGCCGCCGCCATCGGTCGTCACCAGACCGGAGCCGCAGGCCCTCCCGAGCCCGGCCATCCGTGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS CCA 90 bp CGGCTCCGGTCTGGTGACGACCGATGGCGGCGGCGCCTCCGCTGTTaGGGCGGCGGCAGGCGCAGCGCTCTCTCGCTCCGACGCGCTGTC +
Preference number: 5 (lower is better)
Translates to: RLRSGDDRWRRRLRC*GGGRRSALSLRRAV
Trigger: GACAGCGCGTCGGAGCGAGAGAGCGCTGCGCCTGCCGCCGCCCCAACAGCGGAGGCGCCGCCGCCATCGGTCGTCACCAGACCGGAGCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS TCA 90 bp GAGAGGCCCAGCGTCGCCAAGCGGCCGCCCTCCTCGGGTCCCGAGTaGCCCCGGGGCCGAGGTCCGCGCACGAAACCGCTGTCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: ERPSVAKRPPSSGPE*PRGRGPRTKPLSRL
Trigger: GAGGCGAGACAGCGGTTTCGTGCGCGGACCTCGGCCCCGGGGTCACTCGGGACCCGAGGAGGGCGGCCGCTTGGCGACGCTGGGCCTCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467279.1
CDS TCA 90 bp GGGACCACTGGAGCGCGGGGAGCATGCATCAAGGGTCCGTGGCAGTaGGAAGTCCCCACACACGCTCGCTCTGTGAACTGGCTTAGATGC +
Preference number: 5 (lower is better)
Translates to: GTTGARGACIKGPWQ*EVPTHARSVNWLRC
Trigger: GCATCTAAGCCAGTTCACAGAGCGAGCGTGTGTGGGGACTTCTCACTGCCACGGACCCTTGATGCATGCTCCCCGCGCTCCAGTGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000475004.6
CDS CCA 90 bp TGTTCTCTCAGGAAGATCCGCGTTTTTCAGATGAACGCCGAGGCCTaGAGACATCGAACAGCCCGCCCGAAGCGGCCCGGCTCGAGAGCC +
Preference number: 5 (lower is better)
Translates to: CSLRKIRVFQMNAEA*RHRTARPKRPGSRA
Trigger: GGCTCTCGAGCCGGGCCGCTTCGGGCGGGCTGTTCGATGTCTCCAGGCCTCGGCGTTCATCTGAAAAACGCGGATCTTCCTGAGAGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467279.1
CDS-3UTR CAA 90 bp GCGGGGAGCATGCATCAAGGGTCCGTGGCAGTGAGAAGTCCCCACACACGCTCGTGTAGCCCCATTTGGTaGCCAAGCGCCGGAGAACCT +
Preference number: 5 (lower is better)
Translates to: AGSMHQGSVAVRSPHTRSCSPIW*PSAGEP
Trigger: AGGTTCTCCGGCGCTTGGCAACCAAATGGGGCTACA...CGAGCGTGTGTGGGGACTTCTCACTGCCACGGACCCTTGATGCATGCTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS GCA 90 bp GCTCCCGGAGGCTGTGCAAACTGTTGTGACATCAGTGGCTGTGGCTaGTGCCCAGACCGGCCTATCCCACTAAACTGCTGGCTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: APGGCANCCDISGCG*CPDRPIPLNCWLEL
Trigger: GAGCTCTAGCCAGCAGTTTAGTGGGATAGGCCGGTCTGGGCAGCAGCCACAGCCACTGATGTCACAACAGTTTGCACAGCCTCCGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS GCA 90 bp GCTACAAAGCCGGTGGGCAGGTTTGGCTACGCTCAAACCGGGCAGTaGCGCGGTTTAGGCGTCTCCTTCCTTCCCAGCGACTGCACAAAA +
Preference number: 5 (lower is better)
Translates to: ATKPVGRFGYAQTGQ*RGLGVSFLPSDCTK
Trigger: TTTTGTGCAGTCGCTGGGAAGGAAGGAGACGCCTAAACCGCGGCACTGCCCGGTTTGAGCGTAGCCAAACCTGCCCACCGGCTTTGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS GCA 90 bp CCCGGAGGCTGTGCAAACTGTTGTGACATCAGTGGCTGTGGCTGCTaGCCAGACCGGCCTATCCCACTAAACTGCTGGCTAGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: PGGCANCCDISGCGC*PDRPIPLNCWLELC
Trigger: ACAGAGCTCTAGCCAGCAGTTTAGTGGGATAGGCCGGTCTGGGCAGCAGCCACAGCCACTGATGTCACAACAGTTTGCACAGCCTCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 90 bp GAGCAAAACACAGAGAATCGGGGCTACAAAGCCGGTGGGCAGGTTTaGCTACGCTCAAACCGGGCAGTGCCGCGGTTTAGGCGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: EQNTENRGYKAGGQV*LRSNRAVPRFRRLL
Trigger: AAGGAGACGCCTAAACCGCGGCACTGCCCGGTTTGAGCGTAGCCAAACCTGCCCACCGGCTTTGTAGCCCCGATTCTCTGTGTTTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS CCA 90 bp CACACTCATCCTGATACATCAGATTGGGATTGTTGGCTGAAGAAGTaGTCCGGTAACGAGAACGACCACCCCCGCCTCCGCCGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: HTHPDTSDWDCWLKK*SGNENDHPRLRRLL
Trigger: GAGGAGGCGGCGGAGGCGGGGGTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000403230.3
CDS-3UTR CAA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCAGCCGGTGGGCAGGTTaGGCTACGCTCAAACCGGGC +
Preference number: 5 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCSRWAG*ATLKPG
Trigger: GCCCGGTTTGAGCGTAGCCAAACCTGCCCACCGGCT...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp ACCGCTGCAGCCGATCCCGTCTCTTTGCCTTTTATTTTTGGCGGCCTCCTTTCGACACTCCCTCCTCCTTaGGGAAACCGCTGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: TAAADPVSLPFIFGGLLSTLPPP*GNRCSR
Trigger: TCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGT...CGAAAGGAGGCCGCCAAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR CAA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCAGGAGGAGGAGGGTATaGGTAGGCAGTCTGCCCCAT +
Preference number: 5 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSRRRRV*VGSLPH
Trigger: ATGGGGCAGACTGCCTACCAATACCCTCCTCCTCCT...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS TCA 90 bp CCTTCGGTCACACTCATCCTGATACATCAGATTGGGATTGTTGGCTaGAGAAGTGGTCCGGTAACGAGAACGACCACCCCCGCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: PSVTLILIHQIGIVG*RSGPVTRTTTPASA
Trigger: GGCGGAGGCGGGGGTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGTGACCGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000403230.3
CDS GCA 90 bp ATCAGTGGCTGTGGCTGCTGCCCAGACCGGCCTATCCCACTAAACTaGTGGCTAGAGCTCTGTGAACTTCTCCCAGTTGAGGTGGTGCTA +
Preference number: 5 (lower is better)
Translates to: ISGCGCCPDRPIPLN*WLELCELLPVEVVL
Trigger: TAGCACCACCTCAACTGGGAGAAGTTCACAGAGCTCTAGCCAGCAGTTTAGTGGGATAGGCCGGTCTGGGCAGCAGCCACAGCCACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 90 bp AGTGGCTGTGGCTGCTGCCCAGACCGGCCTATCCCACTAAACTGCTaGCTAGAGCTCTGTGAACTTCTCCCAGTTGAGGTGGTGCTACTA +
Preference number: 5 (lower is better)
Translates to: SGCGCCPDRPIPLNC*LELCELLPVEVVLL
Trigger: TAGTAGCACCACCTCAACTGGGAGAAGTTCACAGAGCTCTAGCCAGCAGTTTAGTGGGATAGGCCGGTCTGGGCAGCAGCCACAGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 90 bp CACACTCATCCTGATACATCAGATTGGGATTGTTGGCTGAAGAAGTaGTCCGGTAACGAGAACGACCACCCTTACCCCCGCCTCCGCCGC +
Preference number: 5 (lower is better)
Translates to: HTHPDTSDWDCWLKK*SGNENDHPYPRLRR
Trigger: GCGGCGGAGGCGGGGGTAAGGGTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000431312.2
CDS-3UTR CAA 90 bp ACACGGGACCACTGGAGCGCGGGGAGCATGCATCAAGGGTCCGTGGCAGTGAGACCAATCTCTTTCTGGTaGACTCTTGTCTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: TRDHWSAGSMHQGSVAVRPISFW*TLVSMD
Trigger: ATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGG...TCTCACTGCCACGGACCCTTGATGCATGCTCCCCGCGCTCCAGTGGTCCCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS TCA 90 bp GTAACCTATCATATTGGTAGCTCCCGGAGGCTGTGCAAACTGTTGTaGCATCAGTGGCTGTGGCTGCTGCCCAGACCGGCCTATCCCACT +
Preference number: 5 (lower is better)
Translates to: VTYHIGSSRRLCKLL*HQWLWLLPRPAYPT
Trigger: AGTGGGATAGGCCGGTCTGGGCAGCAGCCACAGCCACTGATGTCACAACAGTTTGCACAGCCTCCGGGAGCTACCAATATGATAGGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 90 bp CCCGCCTCCGCCGCCTCCTCTGTGGTCCACAAGCTGCATCAGTTTTaGATTGATAGCCTGATTGGCCTCTTCCAGCACTTTGATAAGCTC +
Preference number: 5 (lower is better)
Translates to: PASAASSVVHKLHQF*IDSLIGLFQHFDKL
Trigger: GAGCTTATCAAAGTGCTGGAAGAGGCCAATCAGGCTATCAATCCAAAACTGATGCAGCTTGTGGACCACAGAGGAGGCGGCGGAGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS-3UTR CAA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCTCCGGCCACCATCCTaGACTCCTCGAAGCCTTCGG +
Preference number: 5 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGLRPPS*TPRSLR
Trigger: CCGAAGGCTTCGAGGAGTCAAGGATGGTGGCCGGAG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS TCA 90 bp ACAATTGCAGGCAGGAGATACGCCAACGTCTTCCCAGAGCCAGTCTaGGCAATGCCCACCATATCCCGGCCACTAAGAGCCAACGGAAAT +
Preference number: 5 (lower is better)
Translates to: TIAGRRYANVFPEPV*AMPTISRPLRANGN
Trigger: ATTTCCGTTGGCTCTTAGTGGCCGGGATATGGTGGGCATTGCTCAGACTGGCTCTGGGAAGACGTTGGCGTATCTCCTGCCTGCAATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS TCA 90 bp CTCCTCTCCCAACAGGCCCAAGTTCTAATGGCACAGATCCAGACATaGCCTCAGAGGGCAGAGGGGCAGAGAGAACTTTCCATCATGGCT +
Preference number: 5 (lower is better)
Translates to: LLSQQAQVLMAQIQT*PQRAEGQRELSIMA
Trigger: AGCCATGATGGAAAGTTCTCTCTGCCCCTCTGCCCTCTGAGGTCATGTCTGGATCTGTGCCATTAGAACTTGGGCCTGTTGGGAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS TCA 90 bp CCTTCGGTCACACTCATCCTGATACATCAGATTGGGATTGTTGGCTaGAGAAGTGGTCCGGTAACGAGAACGACCACCCTTACCCCCGCC +
Preference number: 5 (lower is better)
Translates to: PSVTLILIHQIGIVG*RSGPVTRTTTLTPA
Trigger: GGCGGGGGTAAGGGTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGTGACCGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000431312.2
CDS GCA 90 bp TTGTTACCAGACCGATGCACACTCCCTCCTCCTTTGGGAAACCGCTaGAGCCGATCCCGTCTCTTTGCCTTTTATTTTTGGCGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: LLPDRCTLPPPLGNR*SRSRLFAFYFWRPP
Trigger: AGGAGGCCGCCAAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGTGCATCGGTCTGGTAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CCA 90 bp GAAGCCTTCGGTCACACTCATCCTGATACATCAGATTGGGATTGTTaGCTGAAGAAGTGGTCCGGTAACGAGAACGACCACCCCCGCCTC +
Preference number: 5 (lower is better)
Translates to: EAFGHTHPDTSDWDC*LKKWSGNENDHPRL
Trigger: GAGGCGGGGGTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGTGACCGAAGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000403230.3
CDS-3UTR CAA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCCCAGACTGGATCATTTaGGTGGGCAGAAGAAACCTG +
Preference number: 5 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSPDWII*VGRRNL
Trigger: CAGGTTTCTTCTGCCCACCAAAATGATCCAGTCTGG...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCAGAGTAGGGCATCCCTaGTGGTGGTACCTCTATGTT +
Preference number: 5 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSRVGHP*WWYLYV
Trigger: AACATAGAGGTACCACCACAAGGGATGCCCTACTCT...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCAGTCCACACAACGAATaGTTAGGGAGGATTGGGGAG +
Preference number: 5 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSSPHNE*LGRIGE
Trigger: CTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACT...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS TCA 90 bp CACTACGATCCCGATAGCTTGCAGAGTCTCTCCGGCCACCATCCTTaGCTCCTCGAAGCCTTCGGTCACACTCATCCTGATACATCAGAT +
Preference number: 5 (lower is better)
Translates to: HYDPDSLQSLSGHHP*LLEAFGHTHPDTSD
Trigger: ATCTGATGTATCAGGATGAGTGTGACCGAAGGCTTCGAGGAGTCAAGGATGGTGGCCGGAGAGACTCTGCAAGCTATCGGGATCGTAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS GCA 90 bp CGCTCTGTGAACTGGCTTAGATGCTTCTCTGTAGCCCCATTTGGTTaGCAAGCGCCGGAGAACCTGGGTTCGGGTAAAAATTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RSVNWLRCFSVAPFG*QAPENLGSGKNFRS
Trigger: GGACCTGAAATTTTTACCCGAACCCAGGTTCTCCGGCGCTTGGCAACCAAATGGGGCTACAGAGAAGCATCTAAGCCAGTTCACAGAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS GCA 90 bp CTTGAGCTGTATAGCTACTGGTGCCATAAGCAGCTGCCCCATAGGTaGCTTGACCATAGGTGTATTGGCCTGCTTGTGCTCCAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: LELYSYWCHKQLPHR*LDHRCIGLLVLQRQ
Trigger: CTGCCTTTGGAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACCAGTAGCTATACAGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS-3UTR CAA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCAGCCGGTGGGCAGGTTaGGCTACGCTCAAACCGGGC +
Preference number: 5 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFSRWAG*ATLKPG
Trigger: GCCCGGTTTGAGCGTAGCCAAACCTGCCCACCGGCT...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp CGCTGCAGCCGATCCCGTCTCTTTGCCTTTTATTTTTGGCGGCCTCCTTTCGAAGCCGATCCCGTCTCTTaGCCTTTTATTTTTGGCGGC +
Preference number: 5 (lower is better)
Translates to: RCSRSRLFAFYFWRPPFEADPVS*PFIFGG
Trigger: GCCGCCAAAAATAAAAGGCAAAGAGACGGGATCGGC...TTCGAAAGGAGGCCGCCAAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR CAA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCACTCCGGCCACCATCCTaGACTCCTCGAAGCCTTCGG +
Preference number: 5 (lower is better)
Translates to: VTDMEAEELNSARFQLCSLRPPS*TPRSLR
Trigger: CCGAAGGCTTCGAGGAGTCAAGGATGGTGGCCGGAG...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCTTGACCATAGGTGTATaGGCCTGCTTGTGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSLTIGV*ACLCSK
Trigger: TTTGGAGCACAAGCAGGCCAATACACCTATGGTCAA...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS GCA 90 bp ATTAGCATAACCAGCTCTATCGGTTTCACTACGATCCCGATAGCTTaGAGAGTCTCTCCGGCCACCATCCTTGACTCCTCGAAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: ISITSSIGFTTIPIA*RVSPATILDSSKPS
Trigger: CGAAGGCTTCGAGGAGTCAAGGATGGTGGCCGGAGAGACTCTGCAAGCTATCGGGATCGTAGTGAAACCGATAGAGCTGGTTATGCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS GCA 90 bp AGCTGCCCCATAGGTGCCTTGACCATAGGTGTATTGGCCTGCTTGTaGTCCAAAGGCAGAATTTGGACTTCCATAGCCACTGCCATTAGC +
Preference number: 5 (lower is better)
Translates to: SCPIGALTIGVLACL*SKGRIWTSIATAIS
Trigger: GCTAATGGCAGTGGCTATGGAAGTCCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS GCA 90 bp ATAAGCAGCTGCCCCATAGGTGCCTTGACCATAGGTGTATTGGCCTaGTTGTGCTCCAAAGGCAGAATTTGGACTTCCATAGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: ISSCPIGALTIGVLA*LCSKGRIWTSIATA
Trigger: GGCAGTGGCTATGGAAGTCCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 90 bp TGCATGCACAGCTGGATGGGGGCACACAGGAGCAAGCGCAGAATTTaGTTTTCTCCAGTCAAGTCTACCCTGATGTTATCTGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: CMHSWMGAHRSKRRI*FSPVKSTLMLSVHC
Trigger: GCAGTGCACAGATAACATCAGGGTAGACTTGACTGGAGAAAACCAAATTCTGCGCTTGCTCCTGTGTGCCCCCATCCAGCTGTGCATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CCA 90 bp GAAGCCTTCGGTCACACTCATCCTGATACATCAGATTGGGATTGTTaGCTGAAGAAGTGGTCCGGTAACGAGAACGACCACCCTTACCCC +
Preference number: 5 (lower is better)
Translates to: EAFGHTHPDTSDWDC*LKKWSGNENDHPYP
Trigger: GGGGTAAGGGTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGTGACCGAAGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000431312.2
CDS-3UTR CAA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCGCCTCTTCCAGCACTTaGATAAGCTCTCTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCASSST*ISSLAC
Trigger: ACAGGCCAGAGAGCTTATCAAAGTGCTGGAAGAGGC...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCTTGTTCAAGGTAACTTaGCCAAAAGGGCAGAGTAGG +
Preference number: 5 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSLFKVT*PKGQSR
Trigger: CCTACTCTGCCCTTTTGGCAAAGTTACCTTGAACAA...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS TCA 90 bp CAGATTGGGCCATCTCCCCTTTCCAAGTATGGCTGGTGGTTAATATaGACAATTGCAGGCAGGAGATACGCCAACGTCTTCCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: QIGPSPLSKYGWWLI*TIAGRRYANVFPEP
Trigger: TGGCTCTGGGAAGACGTTGGCGTATCTCCTGCCTGCAATTGTTCATATTAACCACCAGCCATACTTGGAAAGGGGAGATGGCCCAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS TCA 90 bp GAGCTGCTTCCGGCCAATGTAGATTTGTCTCGGCCATGTATTGAGTaGTCTGCAGCTGATATCAAAGCTTCTAGCCCACGGGAGGCTACA +
Preference number: 5 (lower is better)
Translates to: ELLPANVDLSRPCIE*SAADIKASSPREAT
Trigger: TGTAGCCTCCCGTGGGCTAGAAGCTTTGATATCAGCTGCAGATCACTCAATACATGGCCGAGACAAATCTACATTGGCCGGAAGCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432525.5
CDS GCA 90 bp GCAGACATGATGCAAGTTCTTCATACTAGAAAGGTGTCCTGTGTGTaGATGCACAGCTGGATGGGGGCACACAGGAGCAAGCGCAGAATT +
Preference number: 5 (lower is better)
Translates to: ADMMQVLHTRKVSCV*MHSWMGAHRSKRRI
Trigger: AATTCTGCGCTTGCTCCTGTGTGCCCCCATCCAGCTGTGCATGCACACACAGGACACCTTTCTAGTATGAAGAACTTGCATCATGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS GCA 90 bp AGCACCATATTCTTGAGCTGTATAGCTACTGGTGCCATAAGCAGCTaGCCCATAGGTGCCTTGACCATAGGTGTATTGGCCTGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: STIFLSCIATGAISS*PIGALTIGVLACLC
Trigger: GCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACCAGTAGCTATACAGCTCAAGAATATGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS-3UTR CAA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCCAGAACTAGACAGATaGGGCCATCTCCCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGPELDR*GHLPFP
Trigger: TGGAAAGGGGAGATGGCCCAATCTGTCTAGTTCTGG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCAGAGTAGGGCATCCCTaGTGGTGGTACCTCTATGTT +
Preference number: 5 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCRVGHP*WWYLYV
Trigger: AACATAGAGGTACCACCACAAGGGATGCCCTACTCT...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS CCA 90 bp TCTGGGGAGAGAACGTCAAGGGTGCCATTTCGTGTAAGGCTTTCCTaGGCTGAAGTGTTCTCTCAGGAAGATCCGCGTTTTTCAGATGAA +
Preference number: 5 (lower is better)
Translates to: SGERTSRVPFRVRLS*AEVFSQEDPRFSDE
Trigger: TTCATCTGAAAAACGCGGATCTTCCTGAGAGAACACTTCAGCCCAGGAAAGCCTTACACGAAATGGCACCCTTGACGTTCTCTCCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467279.1
CDS-3UTR CAA 90 bp CACAGATGCCATCTTCCTCTGCAAAACAATTCAGCCCTCCCCCTCCCTCCCTCCAAATTTTTCTCAAACTaGGGGAGCTCACTCAAATCC +
Preference number: 5 (lower is better)
Translates to: HRCHLPLQNNSALPLPPSKFFSN*GSSLKS
Trigger: GGATTTGAGTGAGCTCCCCAAGTTTGAGAAAAATTT...GGAGGGAGGGAGGGGGAGGGCTGAATTGTTTTGCAGAGGAAGATGGCATCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTGGCCACCTGCTGTACTaGCTGGGCAAGCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAGHLLY*LGKLSG
Trigger: ACCAGAGAGCTTGCCCAGCAAGTACAGCAGGTGGCC...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GAGAAGTCCACACAACGAATTGTTAGGGAGGATTGGGGAGAAGCAGCCCATTGCTTGACCATAGGTGTATaGGCCTGCTTGTGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: EKSTQRIVREDWGEAAHCLTIGV*ACLCSK
Trigger: TTTGGAGCACAAGCAGGCCAATACACCTATGGTCAA...GCAATGGGCTGCTTCTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS TCA 90 bp CCTCCTCTGTGGTCCACAAGCTGCATCAGTTTTGGATTGATAGCCTaGTTGGCCTCTTCCAGCACTTTGATAAGCTCTCTGGCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: PPLWSTSCISFGLIA*LASSSTLISSLACF
Trigger: AAAACAGGCCAGAGAGCTTATCAAAGTGCTGGAAGAGGCCAATCAGGCTATCAATCCAAAACTGATGCAGCTTGTGGACCACAGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS GCA 90 bp CTCCATAAGTGCCAGCACCATATTCTTGAGCTGTATAGCTACTGGTaGCATAAGCAGCTGCCCCATAGGTGCCTTGACCATAGGTGTATT +
Preference number: 5 (lower is better)
Translates to: LHKCQHHILELYSYW*HKQLPHRCLDHRCI
Trigger: AATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACCAGTAGCTATACAGCTCAAGAATATGGTGCTGGCACTTATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 90 bp ACATTCTCTGTTTGTTACCAGACCGATGCACACTCCCTCCTCCTTTaGGAAACCGCTGCAGCCGATCCCGTCTCTTTGCCTTTTATTTTT +
Preference number: 5 (lower is better)
Translates to: TFSVCYQTDAHSLLL*ETAAADPVSLPFIF
Trigger: AAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGTGCATCGGTCTGGTAACAAACAGAGAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS-3UTR CAA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAGGCCACCTGCTGTACTaGCTGGGCAAGCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: THLQVFQVLMQQECVWRPGHLLY*LGKLSG
Trigger: ACCAGAGAGCTTGCCCAGCAAGTACAGCAGGTGGCC...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAGCACTCAACTCCAGATaGCCTACGTTGATCTGGGTG +
Preference number: 5 (lower is better)
Translates to: VTDMEAEELNSARFQLCSALNSR*PTLIWV
Trigger: CACCCAGATCAACGTAGGCAATCTGGAGTTGAGTGC...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GAAACCGCTGCAGCCGATCCCGTCTCTTTGCCTTTTATTTTTGGCGGCCTCCTTCTTTGCCTTTTATTTTaGGCGGCCTCCTTTCGAAAA +
Preference number: 5 (lower is better)
Translates to: ETAAADPVSLPFIFGGLLLCLLF*AASFRK
Trigger: TTTTCGAAAGGAGGCCGCCAAAAATAAAAGGCAAAG...AAGGAGGCCGCCAAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS-3UTR CAA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGGGGGAACACTTTGGTTaGAAAGCACAGAGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGGEHFG*KAQSSL
Trigger: CAAACTGCTCTGTGCTTTCAAACCAAAGTGTTCCCC...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
49% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS CCA 90 bp CATATCCCGGCCACTAAGAGCCAACGGAAATCCCTGGCACTGAATTaGAGTTGGTTCTGTAAAGTGCTGATCCATCAACACATCCATTAC +
Preference number: 5 (lower is better)
Translates to: HIPATKSQRKSLALN*SWFCKVLIHQHIHY
Trigger: GTAATGGATGTGTTGATGGATCAGCACTTTACAGAACCAACTCCAATTCAGTGCCAGGGATTTCCGTTGGCTCTTAGTGGCCGGGATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS CCA 90 bp CAGCTGACTGGGATAAGAACCTTTTGTCTGAAAGGCCCTATGACATaGCCTGAATCGCCAATCACTAATAAGGAGGGACTAAGTCTAGCC +
Preference number: 5 (lower is better)
Translates to: QLTGIRTFCLKGPMT*PESPITNKEGLSLA
Trigger: GGCTAGACTTAGTCCCTCCTTATTAGTGATTGGCGATTCAGGCCATGTCATAGGGCCTTTCAGACAAAAGGTTCTTATCCCAGTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CCA 90 bp TTGACCATAGGTGTATTGGCCTGCTTGTGCTCCAAAGGCAGAATTTaGACTTCCATAGCCACTGCCATTAGCATAACCAGCTCTATCGGT +
Preference number: 5 (lower is better)
Translates to: LTIGVLACLCSKGRI*TSIATAISITSSIG
Trigger: ACCGATAGAGCTGGTTATGCTAATGGCAGTGGCTATGGAAGTCCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATACACCTATGGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS-3UTR CAA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCACATATGGTGTCAGCCTaGCTACTTCCGGATGTTCCA +
Preference number: 5 (lower is better)
Translates to: VTDMEAEELNSARFQLCSHMVSA*LLPDVP
Trigger: TGGAACATCCGGAAGTAGCAAGGCTGACACCATATG...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAATCAGATTGGGATTGTaGGCTGAAGAAGTGGTCCGG +
Preference number: 5 (lower is better)
Translates to: VTDMEAEELNSARFQLCSIRLGL*AEEVVR
Trigger: CCGGACCACTTCTTCAGCCAACAATCCCAATCTGAT...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCATACGATCCCGATAGCTaGCAGAGTCTCTCCGGCCAC +
Preference number: 5 (lower is better)
Translates to: THLQVFQVLMQQECVWRPYDPDS*QSLSGH
Trigger: GTGGCCGGAGAGACTCTGCAAGCTATCGGGATCGTA...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTAGGAGGAGGAGGGTATaGGTAGGCAGTCTGCCCCAT +
Preference number: 5 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFRRRRV*VGSLPH
Trigger: ATGGGGCAGACTGCCTACCAATACCCTCCTCCTCCT...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCAGCCTACCATTCTCCCTaGGCCTCAACTTCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: VTDMEAEELNSARFQLCSAYHSP*ASTSVR
Trigger: TCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGC...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAAGTCCACACAACGAATaGTTAGGGAGGATTGGGGAG +
Preference number: 5 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPSPHNE*LGRIGE
Trigger: CTCCCCAATCCTCCCTAACAATTCGTTGTGTGGACT...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS TCA 90 bp GCCTTTCCAGAACGGAACTCATTAAGTACCCAATCTCTTTCTGGTTaGCTCTTGTCTCCATGGATACACATAGCTGGCCAACCATCTCTG +
Preference number: 5 (lower is better)
Translates to: AFPERNSLSTQSLSG*LLSPWIHIAGQPSL
Trigger: CAGAGATGGTTGGCCAGCTATGTGTATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGGGTACTTAATGAGTTCCGTTCTGGAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS TCA 90 bp ACATCTTCCACATCTTCCACGTCAATGATGAGTCAGTGTGTAGGTTaGTGTGGCAGGGAAAGAGAAGGTAAAGGACATGCCAACAACAGG +
Preference number: 5 (lower is better)
Translates to: TSSTSSTSMMSQCVG*CGREREGKGHANNR
Trigger: CCTGTTGTTGGCATGTCCTTTACCTTCTCTTTCCCTGCCACATCAACCTACACACTGACTCATCATTGACGTGGAAGATGTGGAAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000431312.2
CDS CCA 90 bp CCGGCCACTAAGAGCCAACGGAAATCCCTGGCACTGAATTGGAGTTaGTTCTGTAAAGTGCTGATCCATCAACACATCCATTACATATTG +
Preference number: 5 (lower is better)
Translates to: PATKSQRKSLALNWS*FCKVLIHQHIHYIL
Trigger: CAATATGTAATGGATGTGTTGATGGATCAGCACTTTACAGAACCAACTCCAATTCAGTGCCAGGGATTTCCGTTGGCTCTTAGTGGCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS-3UTR CAA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGCCTATCAGGCCTGATTaGGTCAACAATTTTACGGAT +
Preference number: 5 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGPIRPD*VNNFTD
Trigger: ATCCGTAAAATTGTTGACCAAATCAGGCCTGATAGG...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTGCCTCTTCCAGCACTTaGATAAGCTCTCTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAASSST*ISSLAC
Trigger: ACAGGCCAGAGAGCTTATCAAAGTGCTGGAAGAGGC...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTTACGATCCCGATAGCTaGCAGAGTCTCTCCGGCCAC +
Preference number: 5 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLIYDPDS*QSLSGH
Trigger: GTGGCCGGAGAGACTCTGCAAGCTATCGGGATCGTA...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCCTAGGTGTATTGGCCTGCTaGTGCTCCAAAGGCAGAATT +
Preference number: 5 (lower is better)
Translates to: LHIESYFQNPSETIPLSLGVLAC*CSKGRI
Trigger: AATTCTGCCTTTGGAGCACAAGCAGGCCAATACACC...TAGGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATTGCCCCATAGGTGCCTaGACCATAGGTGTATTGGCC +
Preference number: 5 (lower is better)
Translates to: KATNLLDEKSTQRIVREDCPIGA*TIGVLA
Trigger: GGCCAATACACCTATGGTCAAGGCACCTATGGGGCA...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAGCCAGCACCATATTCTaGAGCTGTATAGCTACTGGT +
Preference number: 5 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPASTIF*SCIATG
Trigger: ACCAGTAGCTATACAGCTCAAGAATATGGTGCTGGC...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCGCCTACCATTCTCCCTaGGCCTCAACTTCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFAYHSP*ASTSVR
Trigger: TCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGC...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCCTACAAATAACCACTTGCTaGCCCAGAGACCTTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LHIESYFQNPSETIPLSLQITTC*PRDLSL
Trigger: GAGGGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTG...TAGGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCGGGAGAAGCAGCCCATaGCTTAATACATTGGAACCC +
Preference number: 5 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFGRSSP*LNTLEP
Trigger: GGGTTCCAATGTATTAAGCAATGGGCTGCTTCTCCC...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACACCAGAACTAGACAGATaGGGCCATCTCCCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATPELDR*GHLPFP
Trigger: TGGAAAGGGGAGATGGCCCAATCTGTCTAGTTCTGG...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTCCCTATACATCGGCGAAGATTaGTCTTTCCTGACTCCAGGA +
Preference number: 5 (lower is better)
Translates to: LHIESYFQNPSETIPLSLYIGED*SFLTPG
Trigger: TCCTGGAGTCAGGAAAGACAAATCTTCGCCGATGTA...TAGGGAGAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATGCACTCAACTCCAGATaGCCTACGTTGATCTGGGTG +
Preference number: 5 (lower is better)
Translates to: KATNLLDEKSTQRIVREDALNSR*PTLIWV
Trigger: CACCCAGATCAACGTAGGCAATCTGGAGTTGAGTGC...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTTGCCCCATAGGTGCCTaGACCATAGGTGTATTGGCC +
Preference number: 5 (lower is better)
Translates to: CLNITHLQVFQVLMQQECCPIGA*TIGVLA
Trigger: GGCCAATACACCTATGGTCAAGGCACCTATGGGGCA...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GTGACAGACATGGAGGCAGAAGAGTTAAACTCTGCTAGATTTCAGCTGTGCTCACAGGGCAATCCCTCTTaGTTTTCTAACCCAGTAATG +
Preference number: 5 (lower is better)
Translates to: VTDMEAEELNSARFQLCSQGNPS*FSNPVM
Trigger: CATTACTGGGTTAGAAAACAAAGAGGGATTGCCCTG...TGAGCACAGCTGAAATCTAGCAGAGTTTAACTCTTCTGCCTCCATGTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCGGGGAACACTTTGGTTaGAAAGCACAGAGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFGEHFG*KAQSSL
Trigger: CAAACTGCTCTGTGCTTTCAAACCAAAGTGTTCCCC...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAAATCCAAATAACCACTaGCTTGCCCAGAGACCTTTC +
Preference number: 5 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPNPNNH*LAQRPF
Trigger: GAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGATT...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTGGGAGAAGCAGCCCATaGCTTAATACATTGGAACCC +
Preference number: 5 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAGRSSP*LNTLEP
Trigger: GGGTTCCAATGTATTAAGCAATGGGCTGCTTCTCCC...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS TCA 90 bp ACAGGAGCAAGCGCAGAATTTGGTTTTCTCCAGTCAAGTCTACCCTaGTGTTATCTGTGCACTGCCACAATATTATCTTGCTGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: TGASAEFGFLQSSLP*CYLCTATILSCCLS
Trigger: AGAAAGGCAGCAAGATAATATTGTGGCAGTGCACAGATAACATCAGGGTAGACTTGACTGGAGAAAACCAAATTCTGCGCTTGCTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS-3UTR CAA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCACCTATCAGGCCTGATTaGGTCAACAATTTTACGGAT +
Preference number: 5 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPPIRPD*VNNFTD
Trigger: ATCCGTAAAATTGTTGACCAAATCAGGCCTGATAGG...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCTGGAGGATGTTGTGGTaGGCACTCAACTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: NSNIAFSILCLNITHLQVWRMLW*ALNSRL
Trigger: CAATCTGGAGTTGAGTGCCAACCACAACATCCTCCA...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGTTTCTTCTGTGCCTACCATTCTCCCTTGGCCTCAACTTCTGTAAGATGGGGGATTAGTTGGATCAACTaGTGGTCTTTTTCACTTTCC +
Preference number: 5 (lower is better)
Translates to: CFFCAYHSPLASTSVRWGISWIN*WSFSLS
Trigger: GGAAAGTGAAAAAGACCACAAGTTGATCCAACTAAT...CCCCCATCTTACAGAAGTTGAGGCCAAGGGAGAATGGTAGGCACAGAAGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTATCAGATTGGGATTGTaGGCTGAAGAAGTGGTCCGG +
Preference number: 5 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFIRLGL*AEEVVR
Trigger: CCGGACCACTTCTTCAGCCAACAATCCCAATCTGAT...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCGGTGTATTGGCCTGCTaGTGCTCCAAAGGCAGAATT +
Preference number: 5 (lower is better)
Translates to: NSNIAFSILCLNITHLQVGVLAC*CSKGRI
Trigger: AATTCTGCCTTTGGAGCACAAGCAGGCCAATACACC...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCACAAATAACCACTTGCTaGCCCAGAGACCTTTCCCTC +
Preference number: 5 (lower is better)
Translates to: THLQVFQVLMQQECVWRPQITTC*PRDLSL
Trigger: GAGGGAAAGGTCTCTGGGCAAGCAAGTGGTTATTTG...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTTGGAGGATGTTGTGGTaGGCACTCAACTCCAGATTG +
Preference number: 5 (lower is better)
Translates to: CLNITHLQVFQVLMQQECWRMLW*ALNSRL
Trigger: CAATCTGGAGTTGAGTGCCAACCACAACATCCTCCA...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTACTATCTGGAGGATGTaGTGGTTGGCACTCAACTCC +
Preference number: 5 (lower is better)
Translates to: CLNITHLQVFQVLMQQECTIWRM*WLALNS
Trigger: GGAGTTGAGTGCCAACCACAACATCCTCCAGATAGT...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTACTATCTGGAGGATGTaGTGGTTGGCACTCAACTCC +
Preference number: 5 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLITIWRM*WLALNS
Trigger: GGAGTTGAGTGCCAACCACAACATCCTCCAGATAGT...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCTACATCAGATTGGGATaGTTGGCTGAAGAAGTGGTC +
Preference number: 5 (lower is better)
Translates to: CMLHIESYFQNPSETIPLYIRLG*LAEEVV
Trigger: GACCACTTCTTCAGCCAACAATCCCAATCTGATGTA...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCAGCCAGCACCATATTCTaGAGCTGTATAGCTACTGGT +
Preference number: 5 (lower is better)
Translates to: THLQVFQVLMQQECVWRPASTIF*SCIATG
Trigger: ACCAGTAGCTATACAGCTCAAGAATATGGTGCTGGC...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTTGGAGTCACTACCACTaGAGTGGTTTCATTTACGTG +
Preference number: 5 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAWSHYH*SGFIYV
Trigger: CACGTAAATGAAACCACTCAAGTGGTAGTGACTCCA...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS CCA 90 bp TCTAGAAGATGCTGTAGCAGGGTAAGAAATCCAAAGTTAATGTTTTaGCCAGCTGACTGGGATAAGAACCTTTTGTCTGAAAGGCCCTAT +
Preference number: 5 (lower is better)
Translates to: SRRCCSRVRNPKLMF*PADWDKNLLSERPY
Trigger: ATAGGGCCTTTCAGACAAAAGGTTCTTATCCCAGTCAGCTGGCCAAAACATTAACTTTGGATTTCTTACCCTGCTACAGCATCTTCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS-3UTR CAA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCCACATCCATTACATATaGTGGGAAGTTAGCATGATG +
Preference number: 5 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFHIHYI*WEVSMM
Trigger: CATCATGCTAACTTCCCACAATATGTAATGGATGTG...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGGGGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCCATCACAGCGTCTCTTaGTCTCCACAAATATTATTG +
Preference number: 5 (lower is better)
Translates to: WGCLMSLSCCSEHNSRKFHHSVS*SPQILL
Trigger: CAATAATATTTGTGGAGACAAAGAGACGCTGTGATG...GAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACACCAATCTCTTTCTGGTaGACTCTTGTCTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATPISFW*TLVSMD
Trigger: ATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGG...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GGCTGTCTGATGTCCCTATCCTGTTGTAGTGAACACAATAGCAGAAAATTCTTTTACATCAGATTGGGATaGTTGGCTGAAGAAGTGGTC +
Preference number: 5 (lower is better)
Translates to: GCLMSLSCCSEHNSRKFFYIRLG*LAEEVV
Trigger: GACCACTTCTTCAGCCAACAATCCCAATCTGATGTA...AAAGAATTTTCTGCTATTGTGTTCACTACAACAGGATAGGGACATCAGACAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp ACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTGTCTGGAGACCATGGAGTCACTACCACTaGAGTGGTTTCATTTACGTG +
Preference number: 5 (lower is better)
Translates to: THLQVFQVLMQQECVWRPWSHYH*SGFIYV
Trigger: CACGTAAATGAAACCACTCAAGTGGTAGTGACTCCA...TGGTCTCCAGACACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp CATCCTGTGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACACAGGGCAATCCCTCTTaGTTTTCTAACCCAGTAATG +
Preference number: 5 (lower is better)
Translates to: HPVPEHHTSTSLSSLNATQGNPS*FSNPVM
Trigger: CATTACTGGGTTAGAAAACAAAGAGGGATTGCCCTG...TGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCACAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TTTCACAGATGGTCCCCAGTTAAACTGGGAAGAAATATAGGCAGCTTCCACCCAAGACCTACCTGTATGTaGCACATTGAATCATACTTT +
Preference number: 5 (lower is better)
Translates to: FHRWSPVKLGRNIGSFHPRPTCM*HIESYF
Trigger: AAAGTATGATTCAATGTGCAACATACAGGTAGGTCT...TGGGTGGAAGCTGCCTATATTTCTTCCCAGTTTAACTGGGGACCATCTGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGTATGTTGCACATTGAATCATACTTTCAGAACCCCTCAGAAACCATCCCTCTCAACCCTTTCCCTAAGTaGAGTTTCAACCATGAATGC +
Preference number: 5 (lower is better)
Translates to: CMLHIESYFQNPSETIPLNPFPK*SFNHEC
Trigger: GCATTCATGGTTGAAACTCAACTTAGGGAAAGGGTT...GAGAGGGATGGTTTCTGAGGGGTTCTGAAAGTATGATTCAATGTGCAACATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS TCA 90 bp TCCAAACATCCAAACTCCTGCCTCTGCTACATTTTACCAATATACTaGCAGGAGTTACACCAATATTGGTCTTCAGACGCAAATTCCAGT +
Preference number: 5 (lower is better)
Translates to: SKHPNSCLCYILPIY*QELHQYWSSDANSS
Trigger: ACTGGAATTTGCGTCTGAAGACCAATATTGGTGTAACTCCTGTCAGTATATTGGTAAAATGTAGCAGAGGCAGGAGTTTGGATGTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000431312.2
CDS TCA 90 bp TGCTTAGTTTTAAACTTACCATTAAGTACCCAATCTCTTTCTGGTTaGCTCTTGTCTCCATGGATACACATAGCTGGCCAACCATCTCTG +
Preference number: 5 (lower is better)
Translates to: CLVLNLPLSTQSLSG*LLSPWIHIAGQPSL
Trigger: CAGAGATGGTTGGCCAGCTATGTGTATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGGGTACTTAATGGTAAGTTTAAAACTAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497196.5
CDS GCA 90 bp TATCTGTGCACTGCCACAATATTATCTTGCTGCCTTTCTAGAAGATaGTGTAGCAGGGTAAGAAATCCAAAGTTAATGTTTTGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: YLCTATILSCCLSRR*CSRVRNPKLMFWPA
Trigger: AGCTGGCCAAAACATTAACTTTGGATTTCTTACCCTGCTACAGCATCTTCTAGAAAGGCAGCAAGATAATATTGTGGCAGTGCACAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CCA 90 bp ACAGAGACCACCATTTGGTTTACAAAGCCAAGCATACTTACTATGTaGCCCTTTACAGAAAGTTTGCCTATCCCTGAAATAGAGCATGAA +
Preference number: 5 (lower is better)
Translates to: TETTIWFTKPSILTM*PFTESLPIPEIEHE
Trigger: TTCATGCTCTATTTCAGGGATAGGCAAACTTTCTGTAAAGGGCCACATAGTAAGTATGCTTGGCTTTGTAAACCAAATGGTGGTCTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497196.5
CDS-3UTR CAA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTCACATCCATTACATATaGTGGGAAGTTAGCATGATG +
Preference number: 5 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAHIHYI*WEVSMM
Trigger: CATCATGCTAACTTCCCACAATATGTAATGGATGTG...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTCCAATCTCTTTCTGGTaGACTCTTGTCTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLIPISFW*TLVSMD
Trigger: ATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGG...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp GTAACTTTGCCAAAAGGGCAGAGTAGGTGGCAAAGAGTTGCTTTTAATCTAGCTCCTGTATGTTGCACATaGAATCATACTTTCAGAACC +
Preference number: 5 (lower is better)
Translates to: VTLPKGQSRWQRVAFNLAPVCCT*NHTFRT
Trigger: GGTTCTGAAAGTATGATTCAATGTGCAACATACAGG...AGCTAGATTAAAAGCAACTCTTTGCCACCTACTCTGCCCTTTTGGCAAAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTAATCCAAATAACCACTaGCTTGCCCAGAGACCTTTC +
Preference number: 5 (lower is better)
Translates to: CLNITHLQVFQVLMQQECNPNNH*LAQRPF
Trigger: GAAAGGTCTCTGGGCAAGCAAGTGGTTATTTGGATT...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AAAGCCACTAACCTTTTAGATGAGAAGTCCACACAACGAATTGTTAGGGAGGATAAATTTTTCTCAAACTaGGGGAGCTCACTCAAATCC +
Preference number: 5 (lower is better)
Translates to: KATNLLDEKSTQRIVREDKFFSN*GSSLKS
Trigger: GGATTTGAGTGAGCTCCCCAAGTTTGAGAAAAATTT...ATCCTCCCTAACAATTCGTTGTGTGGACTTCTCATCTAAAAGGTTAGTGGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCCATCACAGCGTCTCTTaGTCTCCACAAATATTATTG +
Preference number: 5 (lower is better)
Translates to: NSNIAFSILCLNITHLQVHHSVS*SPQILL
Trigger: CAATAATATTTGTGGAGACAAAGAGACGCTGTGATG...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCCCTGTATGTTGCACATaGAATCATACTTTCAGAACC +
Preference number: 5 (lower is better)
Translates to: NSNIAFSILCLNITHLQVPVCCT*NHTFRT
Trigger: GGTTCTGAAAGTATGATTCAATGTGCAACATACAGG...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTAACCCTTTCCCTAAGTaGAGTTTCAACCATGAATGC +
Preference number: 5 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLINPFPK*SFNHEC
Trigger: GCATTCATGGTTGAAACTCAACTTAGGGAAAGGGTT...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TGCCTGAACATCACACATCTACAAGTCTTTCAAGTCTTAATGCAACAGGAATGTTCAACATGCAAGAAGTaGGGGGAAGAAATTAATCTC +
Preference number: 5 (lower is better)
Translates to: CLNITHLQVFQVLMQQECSTCKK*GEEINL
Trigger: GAGATTAATTTCTTCCCCCAACTTCTTGCATGTTGA...ACATTCCTGTTGCATTAAGACTTGAAAGACTTGTAGATGTGTGATGTTCAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp TTTATGATTACAATGTCCCAGGTGGAAAAAGGGAAGCAAGCAATCCAAATAACCTCAACATGCAAGAAGTaGGGGGAAGAAATTAATCTC +
Preference number: 5 (lower is better)
Translates to: FMITMSQVEKGKQAIQITSTCKK*GEEINL
Trigger: GAGATTAATTTCTTCCCCCAACTTCTTGCATGTTGA...GGTTATTTGGATTGCTTGCTTCCCTTTTTCCACCTGGGACATTGTAATCATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AATAGTAACATAGCTTTCAGCATCCTGTGCCTGAACATCACACATCTACAAGTCAGACCTACCTGTATGTaGCACATTGAATCATACTTT +
Preference number: 5 (lower is better)
Translates to: NSNIAFSILCLNITHLQVRPTCM*HIESYF
Trigger: AAAGTATGATTCAATGTGCAACATACAGGTAGGTCT...GACTTGTAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS-3UTR CAA 90 bp AGCGAGCATTTATGTTCATTTGCTCACAGCAGCTGTCTGGATGGAAAATTAATTATTAGTTGGATCAACTaGTGGTCTTTTTCACTTTCC +
Preference number: 5 (lower is better)
Translates to: SEHLCSFAHSSCLDGKLIISWIN*WSFSLS
Trigger: GGAAAGTGAAAAAGACCACAAGTTGATCCAACTAAT...AATTAATTTTCCATCCAGACAGCTGCTGTGAGCAAATGAACATAAATGCTCGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000403230.3
CDS GCA 90 bp CCCATTTCACAGATGAAGAAACTGCAGCACCAAGACACAAAATTGTaGAAAATTATACAGCTTGTAATCAGCAGAGCTAAATTTCAAACT +
Preference number: 5 (lower is better)
Translates to: PISQMKKLQHQDTKL*KIIQLVISRAKFQT
Trigger: AGTTTGAAATTTAGCTCTGCTGATTACAAGCTGTATAATTTTGCACAATTTTGTGTCTTGGTGCTGCAGTTTCTTCATCTGTGAAATGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477112.1
CDS GCA 72 bp GGGAGCGGGGCACGGATGGCCGGGCTCGGGAGGGCCTaGGGCTCCGGTCTGGTGACGACCGATGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: GSGARMAGLGRA*GSGLVTTDGGG
Trigger: GCCGCCGCCATCGGTCGTCACCAGACCGGAGCCGCAGGCCCTCCCGAGCCCGGCCATCCGTGCCCCGCTCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS CCA 72 bp CGGGAGGGCCTGCGGCTCCGGTCTGGTGACGACCGATaGCGGCGGCGCCTCCGCTGTTGGGGCGGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: REGLRLRSGDDR*RRRLRCWGGGR
Trigger: CCTGCCGCCGCCCCAACAGCGGAGGCGCCGCCGCCATCGGTCGTCACCAGACCGGAGCCGCAGGCCCTCCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS TCA 72 bp TGGCCGGGCTCGGGAGGGCCTGCGGCTCCGGTCTGGTaGCGACCGATGGCGGCGGCGCCTCCGCTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: WPGSGGPAAPVW*RPMAAAPPLLG
Trigger: CCCCAACAGCGGAGGCGCCGCCGCCATCGGTCGTCACCAGACCGGAGCCGCAGGCCCTCCCGAGCCCGGCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS TCA 72 bp GGAAACCAGGCGAGGCGCCAAAGCCCGGGCCTGGGCTaGTGCGGCCAGGCCGCCCCTCCCGATCCCCCGCGG +
Preference number: 6 (lower is better)
Translates to: GNQARRQSPGLG*CGQAAPPDPPR
Trigger: CCGCGGGGGATCGGGAGGGGCGGCCTGGCCGCATCAGCCCAGGCCCGGGCTTTGGCGCCTCGCCTGGTTTCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467279.1
CDS TCA 72 bp AGCGTCGCCAAGCGGCCGCCCTCCTCGGGTCCCGAGTaGCCCCGGGGCCGAGGTCCGCGCACGAAACCGCTG +
Preference number: 6 (lower is better)
Translates to: SVAKRPPSSGPE*PRGRGPRTKPL
Trigger: CAGCGGTTTCGTGCGCGGACCTCGGCCCCGGGGTCACTCGGGACCCGAGGAGGGCGGCCGCTTGGCGACGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467279.1
CDS CCA 72 bp AGCCGGGAAACCAGGCGAGGCGCCAAAGCCCGGGCCTaGGCTGATGCGGCCAGGCCGCCCCTCCCGATCCCC +
Preference number: 6 (lower is better)
Translates to: SRETRRGAKARA*ADAARPPLPIP
Trigger: GGGGATCGGGAGGGGCGGCCTGGCCGCATCAGCCCAGGCCCGGGCTTTGGCGCCTCGCCTGGTTTCCCGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467279.1
CDS CCA 72 bp TCTGGTGACGACCGATGGCGGCGGCGCCTCCGCTGTTaGGGCGGCGGCAGGCGCAGCGCTCTCTCGCTCCGA +
Preference number: 6 (lower is better)
Translates to: SGDDRWRRRLRC*GGGRRSALSLR
Trigger: TCGGAGCGAGAGAGCGCTGCGCCTGCCGCCGCCCCAACAGCGGAGGCGCCGCCGCCATCGGTCGTCACCAGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS CCA 72 bp TCCCAAAAGGATAGAGATCTGGGAGCGGGGCACGGATaGCCGGGCTCGGGAGGGCCTGCGGCTCCGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SQKDRDLGAGHG*PGSGGPAAPVW
Trigger: CCAGACCGGAGCCGCAGGCCCTCCCGAGCCCGGCCATCCGTGCCCCGCTCCCAGATCTCTATCCTTTTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS CCA 72 bp GCCTCCTCCGCGCATGGTCCCAAAAGGATAGAGATCTaGGAGCGGGGCACGGATGGCCGGGCTCGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: ASSAHGPKRIEI*ERGTDGRAREG
Trigger: GCCCTCCCGAGCCCGGCCATCCGTGCCCCGCTCCCAGATCTCTATCCTTTTGGGACCATGCGCGGAGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS GCA 72 bp CCGGTGGGCAGGTTTGGCTACGCTCAAACCGGGCAGTaGCGCGGTTTAGGCGTCTCCTTCCTTCCCAGCGAC +
Preference number: 6 (lower is better)
Translates to: PVGRFGYAQTGQ*RGLGVSFLPSD
Trigger: GTCGCTGGGAAGGAAGGAGACGCCTAAACCGCGGCACTGCCCGGTTTGAGCGTAGCCAAACCTGCCCACCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS GCA 72 bp TGCCGCGGTTTAGGCGTCTCCTTCCTTCCCAGCGACTaGACAAAATGGCGGCCGCCGCTGAGTCGGCTCCAA +
Preference number: 6 (lower is better)
Translates to: CRGLGVSFLPSD*TKWRPPLSRLQ
Trigger: TTGGAGCCGACTCAGCGGCGGCCGCCATTTTGTGCAGTCGCTGGGAAGGAAGGAGACGCCTAAACCGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396821.8
CDS CCA 72 bp AGGAAGATCCGCGTTTTTCAGATGAACGCCGAGGCCTaGAGACATCGAACAGCCCGCCCGAAGCGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: RKIRVFQMNAEA*RHRTARPKRPG
Trigger: GCCGGGCCGCTTCGGGCGGGCTGTTCGATGTCTCCAGGCCTCGGCGTTCATCTGAAAAACGCGGATCTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467279.1
CDS CCA 72 bp ACAGAGAATCGGGGCTACAAAGCCGGTGGGCAGGTTTaGCTACGCTCAAACCGGGCAGTGCCGCGGTTTAGG +
Preference number: 6 (lower is better)
Translates to: TENRGYKAGGQV*LRSNRAVPRFR
Trigger: CCTAAACCGCGGCACTGCCCGGTTTGAGCGTAGCCAAACCTGCCCACCGGCTTTGTAGCCCCGATTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS TCA 72 bp GGCAGGAGATACGCCAACGTCTTCCCAGAGCCAGTCTaGGCAATGCCCACCATATCCCGGCCACTAAGAGCC +
Preference number: 6 (lower is better)
Translates to: GRRYANVFPEPV*AMPTISRPLRA
Trigger: GGCTCTTAGTGGCCGGGATATGGTGGGCATTGCTCAGACTGGCTCTGGGAAGACGTTGGCGTATCTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS TCA 72 bp CATATTGGTAGCTCCCGGAGGCTGTGCAAACTGTTGTaGCATCAGTGGCTGTGGCTGCTGCCCAGACCGGCC +
Preference number: 6 (lower is better)
Translates to: HIGSSRRLCKLL*HQWLWLLPRPA
Trigger: GGCCGGTCTGGGCAGCAGCCACAGCCACTGATGTCACAACAGTTTGCACAGCCTCCGGGAGCTACCAATATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 72 bp GGAGCAAAACACAGAGAATCGGGGCTACAAAGCCGGTaGGCAGGTTTGGCTACGCTCAAACCGGGCAGTGCC +
Preference number: 6 (lower is better)
Translates to: GAKHRESGLQSR*AGLATLKPGSA
Trigger: GGCACTGCCCGGTTTGAGCGTAGCCAAACCTGCCCACCGGCTTTGTAGCCCCGATTCTCTGTGTTTTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000479734.1
CDS GCA 72 bp GTCCCCACACACGCTCGCTCTGTGAACTGGCTTAGATaGTTCTCTGTAGCCCCATTTGGTTGCCAAGCGCCG +
Preference number: 6 (lower is better)
Translates to: VPTHARSVNWLR*FSVAPFGCQAP
Trigger: CGGCGCTTGGCAACCAAATGGGGCTACAGAGAAGCATCTAAGCCAGTTCACAGAGCGAGCGTGTGTGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000475004.6
CDS CCA 72 bp GGCTGCTGCCCAGACCGGCCTATCCCACTAAACTGCTaGCTAGAGCTCTGTGAACTTCTCCCAGTTGAGGTG +
Preference number: 6 (lower is better)
Translates to: GCCPDRPIPLNC*LELCELLPVEV
Trigger: CACCTCAACTGGGAGAAGTTCACAGAGCTCTAGCCAGCAGTTTAGTGGGATAGGCCGGTCTGGGCAGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS TCA 72 bp CCCGATAGCTTGCAGAGTCTCTCCGGCCACCATCCTTaGCTCCTCGAAGCCTTCGGTCACACTCATCCTGAT +
Preference number: 6 (lower is better)
Translates to: PDSLQSLSGHHP*LLEAFGHTHPD
Trigger: ATCAGGATGAGTGTGACCGAAGGCTTCGAGGAGTCAAGGATGGTGGCCGGAGAGACTCTGCAAGCTATCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS GCA 72 bp TGTGGCTGCTGCCCAGACCGGCCTATCCCACTAAACTaGTGGCTAGAGCTCTGTGAACTTCTCCCAGTTGAG +
Preference number: 6 (lower is better)
Translates to: CGCCPDRPIPLN*WLELCELLPVE
Trigger: CTCAACTGGGAGAAGTTCACAGAGCTCTAGCCAGCAGTTTAGTGGGATAGGCCGGTCTGGGCAGCAGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS GCA 72 bp AACTGGCTTAGATGCTTCTCTGTAGCCCCATTTGGTTaGCAAGCGCCGGAGAACCTAGCCCACGGGAGGCTA +
Preference number: 6 (lower is better)
Translates to: NWLRCFSVAPFG*QAPENLAHGRL
Trigger: TAGCCTCCCGTGGGCTAGGTTCTCCGGCGCTTGGCAACCAAATGGGGCTACAGAGAAGCATCTAAGCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475004.6
CDS CCA 72 bp GTTTGTTACCAGACCGATGCACACTCCCTCCTCCTTTaGGAAACCGCTGCAGCCGATCCCGTCTCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: VCYQTDAHSLLL*ETAAADPVSLP
Trigger: AGGCAAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGTGCATCGGTCTGGTAACAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CCA 72 bp CCTGATACATCAGATTGGGATTGTTGGCTGAAGAAGTaGTCCGGTAACGAGAACGACCACCCCCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: PDTSDWDCWLKK*SGNENDHPRLR
Trigger: GCGGAGGCGGGGGTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000403230.3
CDS CAA 72 bp TGTTTGTTACCAGACCGATGCACACTCCCTCCTCCTTaGGGAAACCGCTGCAGCCGATCCCGTCTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: CLLPDRCTLPPP*GNRCSRSRLFA
Trigger: GGCAAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGTGCATCGGTCTGGTAACAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS GCA 72 bp GAGGGCAGAGGGGCAGAGAGAACTTTCCATCATGGCTaGAGGTCACCACCTCTGAAGGAGGGAATGATGAGT +
Preference number: 6 (lower is better)
Translates to: EGRGAERTFHHG*RSPPLKEGMMS
Trigger: ACTCATCATTCCCTCCTTCAGAGGTGGTGACCTGCAGCCATGATGGAAAGTTCTCTCTGCCCCTCTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS GCA 72 bp ACCAGCTCTATCGGTTTCACTACGATCCCGATAGCTTaGAGAGTCTCTCCGGCCACCATCCTTGACTCCTCG +
Preference number: 6 (lower is better)
Translates to: TSSIGFTTIPIA*RVSPATILDSS
Trigger: CGAGGAGTCAAGGATGGTGGCCGGAGAGACTCTGCAAGCTATCGGGATCGTAGTGAAACCGATAGAGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS GCA 72 bp TGTGCAAACTGTTGTGACATCAGTGGCTGTGGCTGCTaGCCAGACCGGCCTATCCCACTAAACTGCTGGCTA +
Preference number: 6 (lower is better)
Translates to: CANCCDISGCGC*PDRPIPLNCWL
Trigger: TAGCCAGCAGTTTAGTGGGATAGGCCGGTCTGGGCAGCAGCCACAGCCACTGATGTCACAACAGTTTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CAA 72 bp CAGAAAGACGAGAAGGCACTTATCACAGGGGGCAGCTaGAGTCTCCGGCTAGGGTCGTTGACGCAACAAAGG +
Preference number: 6 (lower is better)
Translates to: QKDEKALITGGS*SLRLGSLTQQR
Trigger: CCTTTGTTGCGTCAACGACCCTAGCCGGAGACTCAAGCTGCCCCCTGTGATAAGTGCCTTCTCGTCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS TCA 72 bp CAACAGGCCCAAGTTCTAATGGCACAGATCCAGACATaGCCTCAGAGGGCAGAGGGGCAGAGAGAACTTTCC +
Preference number: 6 (lower is better)
Translates to: QQAQVLMAQIQT*PQRAEGQRELS
Trigger: GGAAAGTTCTCTCTGCCCCTCTGCCCTCTGAGGTCATGTCTGGATCTGTGCCATTAGAACTTGGGCCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS GCA 72 bp GACCGATGCACACTCCCTCCTCCTTTGGGAAACCGCTaGAGCCGATCCCGTCTCTTTGCCTTTTATTTTTGG +
Preference number: 6 (lower is better)
Translates to: DRCTLPPPLGNR*SRSRLFAFYFW
Trigger: CCAAAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGTGCATCGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CCA 72 bp CCTGATACATCAGATTGGGATTGTTGGCTGAAGAAGTaGTCCGGTAACGAGAACGACCACCCTTACCCCCGC +
Preference number: 6 (lower is better)
Translates to: PDTSDWDCWLKK*SGNENDHPYPR
Trigger: GCGGGGGTAAGGGTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000431312.2
CDS CAA 72 bp GCTACTGGTGCCATAAGCAGCTGCCCCATAGGTGCCTaGACCATAGGTGTATTGGCCTGCTTGTGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: ATGAISSCPIGA*TIGVLACLCSK
Trigger: TTTGGAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACCAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CAA 90 bp GGTGCCATAAGCAGCTGCCCCATAGGTGCCTTGACCATAGGTGTATaGGCCTGCTTGTGCTCCAAAGGCAGAATTTGGACTTCCATAGCC +
Preference number: 6 (lower is better)
Translates to: GAISSCPIGALTIGV*ACLCSKGRIWTSIA
Trigger: GGCTATGGAAGTCCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS TCA 72 bp CTCCAAATCTGCTTCCTGTCGTCTCAAACTGCATTTTaGAGCCCCGCAAGCTTGGCCAAATGGCGTCACACG +
Preference number: 6 (lower is better)
Translates to: LQICFLSSQTAF*SPASLAKWRHT
Trigger: CGTGTGACGCCATTTGGCCAAGCTTGCGGGGCTTCAAAATGCAGTTTGAGACGACAGGAAGCAGATTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432525.5
CDS GCA 72 bp TATAGCTACTGGTGCCATAAGCAGCTGCCCCATAGGTaGCTTGACCATAGGTGTATTGGCCTGCTTGTGCTC +
Preference number: 6 (lower is better)
Translates to: YSYWCHKQLPHR*LDHRCIGLLVL
Trigger: GAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACCAGTAGCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS GCA 72 bp CCTCTTGCTCCAAATCTGCTTCCTGTCGTCTCAAACTaGATTTTGAAGCCCCGCAAGCTTGGCCAAATGGCG +
Preference number: 6 (lower is better)
Translates to: PLAPNLLPVVSN*ILKPRKLGQMA
Trigger: CGCCATTTGGCCAAGCTTGCGGGGCTTCAAAATGCAGTTTGAGACGACAGGAAGCAGATTTGGAGCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432525.5
CDS CCA 72 bp GCCGCCTCCTCTGTGGTCCACAAGCTGCATCAGTTTTaGATTGATAGCCTGATTGGCCTCTTCCAGCACTTT +
Preference number: 6 (lower is better)
Translates to: AASSVVHKLHQF*IDSLIGLFQHF
Trigger: AAAGTGCTGGAAGAGGCCAATCAGGCTATCAATCCAAAACTGATGCAGCTTGTGGACCACAGAGGAGGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CAA 72 bp AGCAGCTGCCCCATAGGTGCCTTGACCATAGGTGTATaGGCCTGCTTGTGCTCCAAAGGCAGAATTTGGACT +
Preference number: 6 (lower is better)
Translates to: SSCPIGALTIGV*ACLCSKGRIWT
Trigger: AGTCCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CAA 72 bp GCTCCAAATCTGCTTCCTGTCGTCTCAAACTGCATTTaGAAGCCCCGCAAGCTTGGCCAAATGGCGTCACAC +
Preference number: 6 (lower is better)
Translates to: APNLLPVVSNCI*KPRKLGQMASH
Trigger: GTGTGACGCCATTTGGCCAAGCTTGCGGGGCTTCAAAATGCAGTTTGAGACGACAGGAAGCAGATTTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432525.5
CDS CAA 90 bp AGCAGCTGCCCCATAGGTGCCTTGACCATAGGTGTATTGGCCTGCTaGTGCTCCAAAGGCAGAATTTGGACTTCCATAGCCACTGCCATT +
Preference number: 6 (lower is better)
Translates to: SSCPIGALTIGVLAC*CSKGRIWTSIATAI
Trigger: AATGGCAGTGGCTATGGAAGTCCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CAA 90 bp AGCTGTATAGCTACTGGTGCCATAAGCAGCTGCCCCATAGGTGCCTaGACCATAGGTGTATTGGCCTGCTTGTGCTCCAAAGGCAGAATT +
Preference number: 6 (lower is better)
Translates to: SCIATGAISSCPIGA*TIGVLACLCSKGRI
Trigger: AATTCTGCCTTTGGAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACCAGTAGCTATACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS TCA 72 bp ACACTCATCCTGATACATCAGATTGGGATTGTTGGCTaGAGAAGTGGTCCGGTAACGAGAACGACCACCCCC +
Preference number: 6 (lower is better)
Translates to: TLILIHQIGIVG*RSGPVTRTTTP
Trigger: GGGGGTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000403230.3
CDS GCA 72 bp ATGCAAGTTCTTCATACTAGAAAGGTGTCCTGTGTGTaGATGCACAGCTGGATGGGGGCACACAGGAGCAAG +
Preference number: 6 (lower is better)
Translates to: MQVLHTRKVSCV*MHSWMGAHRSK
Trigger: CTTGCTCCTGTGTGCCCCCATCCAGCTGTGCATGCACACACAGGACACCTTTCTAGTATGAAGAACTTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS GCA 72 bp AACTGGCTTAGATGCTTCTCTGTAGCCCCATTTGGTTaGCAAGCGCCGGAGAACCTGGGTTCGGGTAAAAAT +
Preference number: 6 (lower is better)
Translates to: NWLRCFSVAPFG*QAPENLGSGKN
Trigger: ATTTTTACCCGAACCCAGGTTCTCCGGCGCTTGGCAACCAAATGGGGCTACAGAGAAGCATCTAAGCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS GCA 72 bp TTCTTGAGCTGTATAGCTACTGGTGCCATAAGCAGCTaGCCCATAGGTGCCTTGACCATAGGTGTATTGGCC +
Preference number: 6 (lower is better)
Translates to: FLSCIATGAISS*PIGALTIGVLA
Trigger: GGCCAATACACCTATGGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACCAGTAGCTATACAGCTCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS GCA 72 bp TGCCAGCACCATATTCTTGAGCTGTATAGCTACTGGTaGCATAAGCAGCTGCCCCATAGGTGCCTTGACCAT +
Preference number: 6 (lower is better)
Translates to: CQHHILELYSYW*HKQLPHRCLDH
Trigger: ATGGTCAAGGCACCTATGGGGCAGCTGCTTATGGCACCAGTAGCTATACAGCTCAAGAATATGGTGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CAA 72 bp CCCATAGGTGCCTTGACCATAGGTGTATTGGCCTGCTaGTGCTCCAAAGGCAGAATTTGGACTTCCATAGCC +
Preference number: 6 (lower is better)
Translates to: PIGALTIGVLAC*CSKGRIWTSIA
Trigger: GGCTATGGAAGTCCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS TCA 72 bp CCGGCCAATGTAGATTTGTCTCGGCCATGTATTGAGTaGTCTGCAGCTGATATCAAAGCTTCTAGCCCACGG +
Preference number: 6 (lower is better)
Translates to: PANVDLSRPCIE*SAADIKASSPR
Trigger: CCGTGGGCTAGAAGCTTTGATATCAGCTGCAGATCACTCAATACATGGCCGAGACAAATCTACATTGGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432525.5
CDS GCA 72 bp CCTTTCCAAGTATGGCTGGTGGTTAATATGAACAATTaGAGGCAGGAGATACGCCAACGTCTTCCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: PFQVWLVVNMNN*RQEIRQRLPRA
Trigger: GGCTCTGGGAAGACGTTGGCGTATCTCCTGCCTGCAATTGTTCATATTAACCACCAGCCATACTTGGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS CCA 72 bp AGCTGGATGGGGGCACACAGGAGCAAGCGCAGAATTTaGTTTTCTCCAGTCAAGTCTACCCTGATGTTATCT +
Preference number: 6 (lower is better)
Translates to: SWMGAHRSKRRI*FSPVKSTLMLS
Trigger: AGATAACATCAGGGTAGACTTGACTGGAGAAAACCAAATTCTGCGCTTGCTCCTGTGTGCCCCCATCCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CCA 72 bp GGTCACACTCATCCTGATACATCAGATTGGGATTGTTaGCTGAAGAAGTGGTCCGGTAACGAGAACGACCAC +
Preference number: 6 (lower is better)
Translates to: GHTHPDTSDWDC*LKKWSGNENDH
Trigger: GTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 72 bp GAAGCCTTCGGTCACACTCATCCTGATACATCAGATTaGGATTGTTGGCTGAAGAAGTGGTCCGGTAACGAG +
Preference number: 6 (lower is better)
Translates to: EAFGHTHPDTSD*DCWLKKWSGNE
Trigger: CTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGTGACCGAAGGCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 72 bp GGTGTATTGGCCTGCTTGTGCTCCAAAGGCAGAATTTaGACTTCCATAGCCACTGCCATTAGCATAACCAGC +
Preference number: 6 (lower is better)
Translates to: GVLACLCSKGRI*TSIATAISITS
Trigger: GCTGGTTATGCTAATGGCAGTGGCTATGGAAGTCCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 72 bp AGAACGTCAAGGGTGCCATTTCGTGTAAGGCTTTCCTaGGCTGAAGTGTTCTCTCAGGAAGATCCGCGTTTT +
Preference number: 6 (lower is better)
Translates to: RTSRVPFRVRLS*AEVFSQEDPRF
Trigger: AAAACGCGGATCTTCCTGAGAGAACACTTCAGCCCAGGAAAGCCTTACACGAAATGGCACCCTTGACGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467279.1
CDS CAA 72 bp TCCATGCAGACATCCACTATCTGGAGGATGTTGTGGTaGGCACTCAACTCCAGATTGCCTACGTTGATCTGG +
Preference number: 6 (lower is better)
Translates to: SMQTSTIWRMLW*ALNSRLPTLIW
Trigger: CCAGATCAACGTAGGCAATCTGGAGTTGAGTGCCAACCACAACATCCTCCAGATAGTGGATGTCTGCATGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
ENST00000477112.1
ENST00000497196.5
CDS CAA 72 bp GGCAGCAAACAAAGGGGCCCAAAACAAGCACTGATGTaGAGTAACAAGAAACAGACTCGGGTACCTTCCCTC +
Preference number: 6 (lower is better)
Translates to: GSKQRGPKQALM*SNKKQTRVPSL
Trigger: GAGGGAAGGTACCCGAGTCTGTTTCTTGTTACTCAACATCAGTGCTTGTTTTGGGCCCCTTTGTTTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CAA 72 bp GGTGCTACTAGCTCCATAAGTGCCAGCACCATATTCTaGAGCTGTATAGCTACTGGTGCCATAAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: GATSSISASTIF*SCIATGAISSC
Trigger: GCAGCTGCTTATGGCACCAGTAGCTATACAGCTCAAGAATATGGTGCTGGCACTTATGGAGCTAGTAGCACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CAA 90 bp AACATTCTCTGTTTGTTACCAGACCGATGCACACTCCCTCCTCCTTaGGGAAACCGCTGCAGCCGATCCCGTCTCTTTGCCTTTTATTTT +
Preference number: 6 (lower is better)
Translates to: NILCLLPDRCTLPPP*GNRCSRSRLFAFYF
Trigger: AAAATAAAAGGCAAAGAGACGGGATCGGCTGCAGCGGTTTCCCAAAGGAGGAGGGAGTGTGCATCGGTCTGGTAACAAACAGAGAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS TCA 72 bp TCCTTGACTCCTCGAAGCCTTCGGTCACACTCATCCTaGTACATCAGATTGGGATTGTTGGCTGAAGAAGTG +
Preference number: 6 (lower is better)
Translates to: SLTPRSLRSHSS*YIRLGLLAEEV
Trigger: CACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGTGACCGAAGGCTTCGAGGAGTCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS TCA 72 bp ACACTCATCCTGATACATCAGATTGGGATTGTTGGCTaGAGAAGTGGTCCGGTAACGAGAACGACCACCCTT +
Preference number: 6 (lower is better)
Translates to: TLILIHQIGIVG*RSGPVTRTTTL
Trigger: AAGGGTGGTCGTTCTCGTTACCGGACCACTTCTTCAGCCAACAATCCCAATCTGATGTATCAGGATGAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396821.8
ENST00000431312.2
CDS GCA 72 bp ATAGGTGCCTTGACCATAGGTGTATTGGCCTGCTTGTaGTCCAAAGGCAGAATTTGGACTTCCATAGCCACT +
Preference number: 6 (lower is better)
Translates to: IGALTIGVLACL*SKGRIWTSIAT
Trigger: AGTGGCTATGGAAGTCCAAATTCTGCCTTTGGAGCACAAGCAGGCCAATACACCTATGGTCAAGGCACCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000431312.2
CDS CCA 72 bp GCCACTAAGAGCCAACGGAAATCCCTGGCACTGAATTaGAGTTGGTTCTGTAAAGTGCTGATCCATCAACAC +
Preference number: 6 (lower is better)
Translates to: ATKSQRKSLALN*SWFCKVLIHQH
Trigger: GTGTTGATGGATCAGCACTTTACAGAACCAACTCCAATTCAGTGCCAGGGATTTCCGTTGGCTCTTAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS CCA 72 bp TTCCTGACTCCAGGAAATCTATCAGACGTCCAGGAGTaGCTATGCAGATCTCAACACCTCTTTCCAAGTCTC +
Preference number: 6 (lower is better)
Translates to: FLTPGNLSDVQE*LCRSQHLFPSL
Trigger: GAGACTTGGAAAGAGGTGTTGAGATCTGCATAGCCACTCCTGGACGTCTGATAGATTTCCTGGAGTCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS CCA 72 bp CTTTCCATGCAGACATCCACTATCTGGAGGATGTTGTaGTTGGCACTCAACTCCAGATTGCCTACGTTGATC +
Preference number: 6 (lower is better)
Translates to: LSMQTSTIWRML*LALNSRLPTLI
Trigger: GATCAACGTAGGCAATCTGGAGTTGAGTGCCAACCACAACATCCTCCAGATAGTGGATGTCTGCATGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
ENST00000477112.1
ENST00000497196.5
CDS CCA 72 bp CACCACCTCTTGCTCCAAATCTTAAACAGTGAACTCTaGGGAGAGAACGTCAAGGGTGCCATTTCGTGTAAG +
Preference number: 6 (lower is better)
Translates to: HHLLLQILNSEL*GENVKGAISCK
Trigger: CTTACACGAAATGGCACCCTTGACGTTCTCTCCCCAGAGTTCACTGTTTAAGATTTGGAGCAAGAGGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467279.1
CDS CAA 72 bp TCACTTTCCATGCAGACATCCACTATCTGGAGGATGTaGTGGTTGGCACTCAACTCCAGATTGCCTACGTTG +
Preference number: 6 (lower is better)
Translates to: SLSMQTSTIWRM*WLALNSRLPTL
Trigger: CAACGTAGGCAATCTGGAGTTGAGTGCCAACCACAACATCCTCCAGATAGTGGATGTCTGCATGGAAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
ENST00000477112.1
ENST00000497196.5
CDS CAA 90 bp TTCTGTCAGCTTCGTCCAATACAAGGTAAGTACATCGGCGAAGATTaGTCTTTCCTGACTCCAGGAAATCTATCAGACGTCCAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: FCQLRPIQGKYIGED*SFLTPGNLSDVQEW
Trigger: CCACTCCTGGACGTCTGATAGATTTCCTGGAGTCAGGAAAGACAAATCTTCGCCGATGTACTTACCTTGTATTGGACGAAGCTGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
ENST00000477112.1
ENST00000497196.5
CDS TCA 72 bp TGTTGTGGTTGGCACTCAACTCCAGATTGCCTACGTTaGTCTGGGTGTAATCACGAAGGAAATCCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: CCGWHSTPDCLR*SGCNHEGNPLQ
Trigger: TTGCAGAGGATTTCCTTCGTGATTACACCCAGATCAACGTAGGCAATCTGGAGTTGAGTGCCAACCACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
ENST00000477112.1
ENST00000497196.5
CDS CAA 90 bp TGCCTTTCCAGAACGGAACTCATTAAGTACCCAATCTCTTTCTGGTaGACTCTTGTCTCCATGGATACACATAGCTGGCCAACCATCTCT +
Preference number: 6 (lower is better)
Translates to: CLSRTELIKYPISFW*TLVSMDTHSWPTIS
Trigger: AGAGATGGTTGGCCAGCTATGTGTATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGGGTACTTAATGAGTTCCGTTCTGGAAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS CCA 72 bp AAGAGCCAACGGAAATCCCTGGCACTGAATTGGAGTTaGTTCTGTAAAGTGCTGATCCATCAACACATCCAT +
Preference number: 6 (lower is better)
Translates to: KSQRKSLALNWS*FCKVLIHQHIH
Trigger: ATGGATGTGTTGATGGATCAGCACTTTACAGAACCAACTCCAATTCAGTGCCAGGGATTTCCGTTGGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS CCA 72 bp GTAGAAGCCTTCACTTTCCAGGATCTTGTAGGACATTaGTCAGAATTCTGCCATTTTGGTGGGTTTTCTCCC +
Preference number: 6 (lower is better)
Translates to: VEAFTFQDLVGH*SEFCHFGGFSP
Trigger: GGGAGAAAACCCACCAAAATGGCAGAATTCTGACCAATGTCCTACAAGATCCTGGAAAGTGAAGGCTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CAA 72 bp GGTAGAAGCCTTCACTTTCCAGGATCTTGTAGGACATaGGTCAGAATTCTGCCATTTTGGTGGGTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: GRSLHFPGSCRT*VRILPFWWVFS
Trigger: GGAGAAAACCCACCAAAATGGCAGAATTCTGACCAATGTCCTACAAGATCCTGGAAAGTGAAGGCTTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS TCA 72 bp GAACGGAACTCATTAAGTACCCAATCTCTTTCTGGTTaGCTCTTGTCTCCATGGATACACATAGCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: ERNSLSTQSLSG*LLSPWIHIAGQ
Trigger: TTGGCCAGCTATGTGTATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGGGTACTTAATGAGTTCCGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
ENST00000475004.6
CDS TCA 72 bp AAGGGAACATTTAAGAGACCATCGCTTGACAGGAAGTaGAAAAAGGCCCTGGTGACTCAGCTGAAAATTGCA +
Preference number: 6 (lower is better)
Translates to: KGTFKRPSLDRK*KKALVTQLKIA
Trigger: TGCAATTTTCAGCTGAGTCACCAGGGCCTTTTTTCACTTCCTGTCAAGCGATGGTCTCTTAAATGTTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CAA 72 bp CTTCGTCCAATACAAGGTAAGTACATCGGCGAAGATTaGTCTTTCCTGACTCCAGGAAATCTATCAGACGTC +
Preference number: 6 (lower is better)
Translates to: LRPIQGKYIGED*SFLTPGNLSDV
Trigger: GACGTCTGATAGATTTCCTGGAGTCAGGAAAGACAAATCTTCGCCGATGTACTTACCTTGTATTGGACGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
ENST00000477112.1
ENST00000497196.5
CDS CAA 72 bp AGAACGGAACTCATTAAGTACCCAATCTCTTTCTGGTaGACTCTTGTCTCCATGGATACACATAGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: RTELIKYPISFW*TLVSMDTHSWP
Trigger: TGGCCAGCTATGTGTATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGGGTACTTAATGAGTTCCGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
ENST00000475004.6
CDS CCA 72 bp AATCATCAGTTGATAACACACCTACAGATAAGTGCATaGGTAGGAGGGGATAGCCAAGTGCCCATGATAATT +
Preference number: 6 (lower is better)
Translates to: NHQLITHLQISA*VGGDSQVPMII
Trigger: AATTATCATGGGCACTTGGCTATCCCCTCCTACCCATGCACTTATCTGTAGGTGTGTTATCAACTGATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CCA 72 bp GTAAGAAATCCAAAGTTAATGTTTTGGCCAGCTGACTaGGATAAGAACCTTTTGTCTGAAAGGCCCTATGAC +
Preference number: 6 (lower is better)
Translates to: VRNPKLMFWPAD*DKNLLSERPYD
Trigger: GTCATAGGGCCTTTCAGACAAAAGGTTCTTATCCCAGTCAGCTGGCCAAAACATTAACTTTGGATTTCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CCA 72 bp TGCTGTAGCAGGGTAAGAAATCCAAAGTTAATGTTTTaGCCAGCTGACTGGGATAAGAACCTTTTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: CCSRVRNPKLMF*PADWDKNLLSE
Trigger: TTCAGACAAAAGGTTCTTATCCCAGTCAGCTGGCCAAAACATTAACTTTGGATTTCTTACCCTGCTACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CAA 90 bp TTTACAAAGCCAAGCATACTTACTATGTGGCCCTTTACAGAAAGTTaGCCTATCCCTGAAATAGAGCATGAACATTCACTTATGGGCAGG +
Preference number: 6 (lower is better)
Translates to: FTKPSILTMWPFTES*PIPEIEHEHSLMGR
Trigger: CCTGCCCATAAGTGAATGTTCATGCTCTATTTCAGGGATAGGCAAACTTTCTGTAAAGGGCCACATAGTAAGTATGCTTGGCTTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497196.5
CDS CAA 90 bp ATGCTTAGTTTTAAACTTACCATTAAGTACCCAATCTCTTTCTGGTaGACTCTTGTCTCCATGGATACACATAGCTGGCCAACCATCTCT +
Preference number: 6 (lower is better)
Translates to: MLSFKLTIKYPISFW*TLVSMDTHSWPTIS
Trigger: AGAGATGGTTGGCCAGCTATGTGTATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGGGTACTTAATGGTAAGTTTAAAACTAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497196.5
CDS TCA 72 bp ATCAACACATCCATTACATATTGTGGGAAGTTAGCATaGTGGAAGGCAAACACGGGTTTAGGACAAACATCT +
Preference number: 6 (lower is better)
Translates to: INTSITYCGKLA*WKANTGLGQTS
Trigger: AGATGTTTGTCCTAAACCCGTGTTTGCCTTCCATCATGCTAACTTCCCACAATATGTAATGGATGTGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216019.11
ENST00000396821.8
ENST00000403230.3
ENST00000432525.5
CDS TCA 72 bp TTAAACTTACCATTAAGTACCCAATCTCTTTCTGGTTaGCTCTTGTCTCCATGGATACACATAGCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: LNLPLSTQSLSG*LLSPWIHIAGQ
Trigger: TTGGCCAGCTATGTGTATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGGGTACTTAATGGTAAGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497196.5
CDS CAA 72 bp TTTAAACTTACCATTAAGTACCCAATCTCTTTCTGGTaGACTCTTGTCTCCATGGATACACATAGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: FKLTIKYPISFW*TLVSMDTHSWP
Trigger: TGGCCAGCTATGTGTATCCATGGAGACAAGAGTCAACCAGAAAGAGATTGGGTACTTAATGGTAAGTTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497196.5
CDS CAA 90 bp CCTCTGCTACATTTTACCAATATACTGACAGGAGTTACACCAATATaGGTCTTCAGACGCAAATTCCAGTACTATCCTTTACAAAACCAG +
Preference number: 6 (lower is better)
Translates to: PLLHFTNILTGVTPI*VFRRKFQYYPLQNQ
Trigger: CTGGTTTTGTAAAGGATAGTACTGGAATTTGCGTCTGAAGACCAATATTGGTGTAACTCCTGTCAGTATATTGGTAAAATGTAGCAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000431312.2
CDS CCA 72 bp ACCATTTGGTTTACAAAGCCAAGCATACTTACTATGTaGCCCTTTACAGAAAGTTTGCCTATCCCTGAAATA +
Preference number: 6 (lower is better)
Translates to: TIWFTKPSILTM*PFTESLPIPEI
Trigger: TATTTCAGGGATAGGCAAACTTTCTGTAAAGGGCCACATAGTAAGTATGCTTGGCTTTGTAAACCAAATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497196.5
CDS GCA 72 bp ACTGCCACAATATTATCTTGCTGCCTTTCTAGAAGATaGTGTAGCAGGGTAAGAAATCCAAAGTTAATGTTT +
Preference number: 6 (lower is better)
Translates to: TATILSCCLSRR*CSRVRNPKLMF
Trigger: AAACATTAACTTTGGATTTCTTACCCTGCTACAGCATCTTCTAGAAAGGCAGCAAGATAATATTGTGGCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216019.11
CDS CAA 72 bp ATTTTTGCTCAACTCAAGGTTATTTCAACTCAGGACTaGTTTCAATTATCAATGATTGTCTACGTGACCTGG +
Preference number: 6 (lower is better)
Translates to: IFAQLKVISTQD*FQLSMIVYVTW
Trigger: CCAGGTCACGTAGACAATCATTGATAATTGAAACAAGTCCTGAGTTGAAATAACCTTGAGTTGAGCAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000431312.2
CDS CAA 72 bp CATTTTACCAATATACTGACAGGAGTTACACCAATATaGGTCTTCAGACGCAAATTCCAGTACTATCCTTTA +
Preference number: 6 (lower is better)
Translates to: HFTNILTGVTPI*VFRRKFQYYPL
Trigger: TAAAGGATAGTACTGGAATTTGCGTCTGAAGACCAATATTGGTGTAACTCCTGTCAGTATATTGGTAAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000431312.2
CDS CCA 72 bp GACTTGTTTCAATTATCAATGATTGTCTACGTGACCTaGGAAATTAAATTAATAGCCAAAGAACGTGGGAAA +
Preference number: 6 (lower is better)
Translates to: DLFQLSMIVYVT*EIKLIAKERGK
Trigger: TTTCCCACGTTCTTTGGCTATTAATTTAATTTCCCAGGTCACGTAGACAATCATTGATAATTGAAACAAGTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216019.11
ENST00000431312.2