Pregenerated sensors for DDX11 (Homo sapiens)
Ensembl gene IDs: ENSG00000013573Ensembl transcript IDs: ENST00000228264.10, ENST00000350437.8, ENST00000435753.6, ENST00000438391.6, ENST00000536265.5, ENST00000540935.5, ENST00000542129.5, ENST00000542838.6, ENST00000543026.5, ENST00000545668.5, ENST00000545717.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTGTAGAAGGGGCAGGCTGCCTGCTTCTCCTGCCTCCTCCTCTTTaGCTTCTCCTCCTCAGCTCCTTTCTTCGTGCCTGCTTCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: VVEGAGCLLLLPPPL*LLLLSSFLRACFSA Trigger: TGCAGAGAAGCAGGCACGAAGAAAGGAGCTGAGGAGGAGAAGCCAAAGAGGAGGAGGCAGGAGAAGCAGGCAGCCTGCCCCTTCTACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| 3UTR CAA 90 bp | GGTTGTAGAAGGGGCAGGCTGCCTGCTTCTCCTGCCTCCTCCTCTTaGGCTTCTCCTCCTCAGCTCCTTTCTTCGTGCCTGCTTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GCRRGRLPASPASSS*ASPPQLLSSCLLLC Trigger: GCAGAGAAGCAGGCACGAAGAAAGGAGCTGAGGAGGAGAAGCCAAAGAGGAGGAGGCAGGAGAAGCAGGCAGCCTGCCCCTTCTACAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| CDS CCA 90 bp | TGCATGAGCAAATCCTCAGACAGGACAGAGGAAGGCCTGGTGCGCTaGAGGAAGTTCAGGGCAGCGGGGAAGCTGGCGTCTGGTGGATGG | + |
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Preference number: 5 (lower is better) Translates to: CMSKSSDRTEEGLVR*RKFRAAGKLASGGW Trigger: CCATCCACCAGACGCCAGCTTCCCCGCTGCCCTGAACTTCCTCCAGCGCACCAGGCCTTCCTCTGTCCTGTCTGAGGATTTGCTCATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| CDS CCA 90 bp | GTTGTAGAAGGGGCAGGCTGCCTGCTTCTCCTGCCTCCTCCTCTTTaGCTTCTCCTCCTCAGCTCCTTTCTTCTTCTCTGCCGGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VVEGAGCLLLLPPPL*LLLLSSFLLLCREP Trigger: TGGCTCCCGGCAGAGAAGAAGAAAGGAGCTGAGGAGGAGAAGCCAAAGAGGAGGAGGCAGGAGAAGCAGGCAGCCTGCCCCTTCTACAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542129.5 |
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| CDS CCA 90 bp | CTCCGCCTCCCGGGTTTGAGCAAGCAATTCTCTTGTCTCAGCCTCTaGAGCAGCTGGGACTACAGGCCACGGCAACACTCCCAGCTAATT | + |
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Preference number: 5 (lower is better) Translates to: LRLPGLSKQFSCLSL*SSWDYRPRQHSQLI Trigger: AATTAGCTGGGAGTGTTGCCGTGGCCTGTAGTCCCAGCTGCTCCAGAGGCTGAGACAAGAGAATTGCTTGCTCAAACCCGGGAGGCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543026.5 |
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| CDS GCA 90 bp | ATCCTCATCCACTCTGAGCCAGGCCTTAAAGGAGAGGAAGACATCTaGCAAGGGAGGAGGGCAGGGTGTTTGGCCACAGCACGTTGCATG | + |
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Preference number: 5 (lower is better) Translates to: ILIHSEPGLKGEEDI*QGRRAGCLATARCM Trigger: CATGCAACGTGCTGTGGCCAAACACCCTGCCCTCCTCCCTTGGCAGATGTCTTCCTCTCCTTTAAGGCCTGGCTCAGAGTGGATGAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| CDS CCA 90 bp | GTTGTAGAAGGGGCAGGCTGCCTGCTTCTCCTGCCTCCTCCTCTTTaGCTTCTCCTCCTCAGCTCCTTTCTTCTTCTCGTGCCTGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: VVEGAGCLLLLPPPL*LLLLSSFLLLVPAS Trigger: AGAAGCAGGCACGAGAAGAAGAAAGGAGCTGAGGAGGAGAAGCCAAAGAGGAGGAGGCAGGAGAAGCAGGCAGCCTGCCCCTTCTACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000228264.10 ENST00000350437.8 ENST00000438391.6 ENST00000542838.6 ENST00000545668.5 ENST00000545717.1 |
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| CDS CCA 72 bp | AAATCCTCAGACAGGACAGAGGAAGGCCTGGTGCGCTaGAGGAAGTTCAGGGCAGCGGGGAAGCTGGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: KSSDRTEEGLVR*RKFRAAGKLAS Trigger: AGACGCCAGCTTCCCCGCTGCCCTGAACTTCCTCCAGCGCACCAGGCCTTCCTCTGTCCTGTCTGAGGATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| CDS CAA 90 bp | GGTTGTAGAAGGGGCAGGCTGCCTGCTTCTCCTGCCTCCTCCTCTTaGGCTTCTCCTCCTCAGCTCCTTTCTTCTTCTCTGCCGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GCRRGRLPASPASSS*ASPPQLLSSSLPGA Trigger: GGCTCCCGGCAGAGAAGAAGAAAGGAGCTGAGGAGGAGAAGCCAAAGAGGAGGAGGCAGGAGAAGCAGGCAGCCTGCCCCTTCTACAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542129.5 |
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| CDS TCA 72 bp | GGAGGAGGGCAGGGTGTTTGGCCACAGCACGTTGCATaGGCAAATCCTCAGACAGGACAGAGGAAGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GGGQGVWPQHVA*ANPQTGQRKAW Trigger: CCAGGCCTTCCTCTGTCCTGTCTGAGGATTTGCTCATGCAACGTGCTGTGGCCAAACACCCTGCCCTCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| CDS CAA 72 bp | CAACCTCCGCCTCCCGGGTTTGAGCAAGCAATTCTCTaGTCTCAGCCTCTGGAGCAGCTGGGACTACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: QPPPPGFEQAIL*SQPLEQLGLQA Trigger: GGCCTGTAGTCCCAGCTGCTCCAGAGGCTGAGACAAGAGAATTGCTTGCTCAAACCCGGGAGGCGGAGGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543026.5 |
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| CDS CAA 90 bp | AGACATCTGCCAAGGGAGGAGGGCAGGGTGTTTGGCCACAGCACGTaGCATGAGCAAATCCTCAGACAGGACAGAGGAAGGCCTGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: RHLPREEGRVFGHST*HEQILRQDRGRPGA Trigger: CGCACCAGGCCTTCCTCTGTCCTGTCTGAGGATTTGCTCATGCAACGTGCTGTGGCCAAACACCCTGCCCTCCTCCCTTGGCAGATGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| CDS CAA 90 bp | GGTTGTAGAAGGGGCAGGCTGCCTGCTTCTCCTGCCTCCTCCTCTTaGGCTTCTCCTCCTCAGCTCCTTTCTTCTTCTCGTGCCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GCRRGRLPASPASSS*ASPPQLLSSSRACF Trigger: GAAGCAGGCACGAGAAGAAGAAAGGAGCTGAGGAGGAGAAGCCAAAGAGGAGGAGGCAGGAGAAGCAGGCAGCCTGCCCCTTCTACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000228264.10 ENST00000350437.8 ENST00000438391.6 ENST00000542838.6 ENST00000545668.5 ENST00000545717.1 |
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| CDS CAA 90 bp | GGTTGTAGAAGGGGCAGGCTGCCTGCTTCTCCTGCCTCCTCCTCTTaGGCTTCTCCTCCTCAGCTCCTTTCTTCTTCTCTGAGGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: GCRRGRLPASPASSS*ASPPQLLSSSLRVA Trigger: TGCCACCCTCAGAGAAGAAGAAAGGAGCTGAGGAGGAGAAGCCAAAGAGGAGGAGGCAGGAGAAGCAGGCAGCCTGCCCCTTCTACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000536265.5 ENST00000540935.5 ENST00000543026.5 |
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| CDS GCA 72 bp | CAAGGGAGGAGGGCAGGGTGTTTGGCCACAGCACGTTaGATGAGCAAATCCTCAGACAGGACAGAGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: QGRRAGCLATAR*MSKSSDRTEEG Trigger: GCCTTCCTCTGTCCTGTCTGAGGATTTGCTCATGCAACGTGCTGTGGCCAAACACCCTGCCCTCCTCCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| CDS GCA 72 bp | CACTCTGAGCCAGGCCTTAAAGGAGAGGAAGACATCTaGCAAGGGAGGAGGGCAGGGTGTTTGGCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: HSEPGLKGEEDI*QGRRAGCLATA Trigger: TGCTGTGGCCAAACACCCTGCCCTCCTCCCTTGGCAGATGTCTTCCTCTCCTTTAAGGCCTGGCTCAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| CDS CCA 72 bp | CCGGGTTTGAGCAAGCAATTCTCTTGTCTCAGCCTCTaGAGCAGCTGGGACTACAGGCCACGGCAACACTCC | + |
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Preference number: 6 (lower is better) Translates to: PGLSKQFSCLSL*SSWDYRPRQHS Trigger: GGAGTGTTGCCGTGGCCTGTAGTCCCAGCTGCTCCAGAGGCTGAGACAAGAGAATTGCTTGCTCAAACCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543026.5 |
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| CDS CAA 72 bp | CCAAGGGAGGAGGGCAGGGTGTTTGGCCACAGCACGTaGCATGAGCAAATCCTCAGACAGGACAGAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PREEGRVFGHST*HEQILRQDRGR Trigger: CCTTCCTCTGTCCTGTCTGAGGATTTGCTCATGCAACGTGCTGTGGCCAAACACCCTGCCCTCCTCCCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| CDS CAA 72 bp | GAGGAAGACATCTGCCAAGGGAGGAGGGCAGGGTGTTaGGCCACAGCACGTTGCATGAGCAAATCCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: EEDICQGRRAGC*ATARCMSKSSD Trigger: GTCTGAGGATTTGCTCATGCAACGTGCTGTGGCCAAACACCCTGCCCTCCTCCCTTGGCAGATGTCTTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435753.6 |
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| CDS CCA 72 bp | ACATCCTATTTCAAAGTGAGGGTTAAGGCGTGGAGCTaGGGTAACAAAAATAAAAGCAACTCTGCACATCTT | + |
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Preference number: 6 (lower is better) Translates to: TSYFKVRVKAWS*GNKNKSNSAHL Trigger: AAGATGTGCAGAGTTGCTTTTATTTTTGTTACCCCAGCTCCACGCCTTAACCCTCACTTTGAAATAGGATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000545717.1 |
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