Pregenerated sensors for DDRGK1 (Homo sapiens)
Ensembl gene IDs: ENSG00000198171Ensembl transcript IDs: ENST00000354488.8, ENST00000380201.2, ENST00000470203.1, ENST00000496781.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCCTGGCCACACCATCACTTAGGCCACACCAACTCTaGGTCCAAGAGGGAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: LSSTHRPLIYNCLATPSLRPHQL*VQEGRT Trigger: AGTCCTTCCCTCTTGGACTCAGAGTTGGTGTGGCCT...AAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| 3UTR GCA 72 bp | AAGCTCAGCAGTACTCACAGGCCTTTAATCTATAACTaGCTGGCCACACCATCACTTCCCCAGGATGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: KLSSTHRPLIYN*LATPSLPQDGG Trigger: CCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| 3UTR TCA 72 bp | CTTCCAAGGGACCCTCCCCACCTCTCGGATATATTCTaGAGCCTAAATTTCACCTGCTTATCTAGGATCCTA | + |
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Preference number: 3 (lower is better) Translates to: LPRDPPHLSDIF*SLNFTCLSRIL Trigger: TAGGATCCTAGATAAGCAGGTGAAATTTAGGCTTCAGAATATATCCGAGAGGTGGGGAGGGTCCCTTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR GCA 90 bp | ACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTATCCGGCGCCGAGGCCTaGCTCCAGCTCTCGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TAWPHHHFPRMVGRDEDVSGAEA*LQLSAP Trigger: AGGAGCCGAGAGCTGGAGGCAGGCCTCGGCGCCGGA...TACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR GCA 90 bp | CTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTATTGCTCCCGCTGGGCCTaGTCCTCGCGGGCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LPGHTITSPGWWGGMKMYCSRWA*SSRAFL Trigger: GAGGAAGGCCCGCGAGGAGCAGGCCCAGCGGGAGCA...ATACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR TCA 90 bp | ATAACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATCCCGGCCCCAGGCGATaGGGGAGTTGCTGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: ITAWPHHHFPRMVGRDEDPGPRR*GSCWLG Trigger: CCCAAGCCAGCAACTCCCTCATCGCCTGGGGCCGGG...ATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGTTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | CCTTTAATCTATAACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGTCAGGCTGGGGCTTaGGCAGGGGACTCCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PLIYNCLATPSLPQDGGEGQAGA*AGDSRP Trigger: GGGCCGGGAGTCCCCTGCCCAAGCCCCAGCCTGACC...CTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR GCA 90 bp | ACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTATCAGTGCAGAACCACTaGGTCCACCCTGAGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: TAWPHHHFPRMVGRDEDVSVQNH*VHPEAG Trigger: CCCGGCCTCAGGGTGGACGCAGTGGTTCTGCACTGA...TACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR GCA 90 bp | AGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCAGAGTTGCTCCCGCTGGGCCTaGTCCTCGCGGGCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RVVKVTDLGCFGHRGWQSCSRWA*SSRAFL Trigger: GAGGAAGGCCCGCGAGGAGCAGGCCCAGCGGGAGCA...ACTCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | TTCTGCCACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTACGCTGGGCTCGACGCTaGGCCTGTAGGCGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: FCHTKPHQAQQYSQAFNLRWARR*ACRRLP Trigger: GGGCAGCCGCCTACAGGCCCAGCGTCGAGCCCAGCG...TAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGTGGCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGTGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTCGCTGGGCTCGACGCTaGGCCTGTAGGCGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GWCSLCMRVVKVTDLGCFRWARR*ACRRLP Trigger: GGGCAGCCGCCTACAGGCCCAGCGTCGAGCCCAGCG...AAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCACCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR TCA 90 bp | TGGATTCATAATAAGAACAGGACTTCACCAGCTTCCAAGGGACCCTCCCCACCTGGCCCCGCTGTCGGATaGAGTTGGCCACGGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: WIHNKNRTSPASKGPSPPGPAVG*SWPRRP Trigger: TGGCCGCCGTGGCCAACTTCATCCGACAGCGGGGCC...AGGTGGGGAGGGTCCCTTGGAAGCTGGTGAAGTCCTGTTCTTATTATGAATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR TCA 90 bp | AAGCGGGGCAGTGATGTTTGCAACACAGGCTGGTGCAGTCTGTGCATGAGAGTTCCACTGCGTCCACCCTaGGGCCGGGATCTCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: KRGSDVCNTGWCSLCMRVPLRPP*GRDLIG Trigger: GCCTATGAGATCCCGGCCTCAGGGTGGACGCAGTGG...AACTCTCATGCACAGACTGCACCAGCCTGTGTTGCAAACATCACTGCCCCGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | CTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTATACGTTCAGCCTCCTCTaGCTCACGCTGGGCCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: LPGHTITSPGWWGGMKMYTFSLL*LTLGLS Trigger: CGAAAGGCCCAGCGTGAGGCAGAGGAGGCTGAACGT...ATACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | ACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCGCCCAGGCCACCCGCTaGGCTCGACGCTGGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: TPSHTKLSSTHRPLIYNCAQATR*ARRWAC Trigger: ACAGGCCCAGCGTCGAGCCCAGCGGGTGGCCTGGGC...GCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | TGGATTCATAATAAGAACAGGACTTCACCAGCTTCCAAGGGACCCTCCCCACCTTCCTCATGCTCCCGCTaGGCCTGCTCCTCGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: WIHNKNRTSPASKGPSPPSSCSR*ACSSRA Trigger: GGCCCGCGAGGAGCAGGCCCAGCGGGAGCATGAGGA...AGGTGGGGAGGGTCCCTTGGAAGCTGGTGAAGTCCTGTTCTTATTATGAATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGTGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTTCCTCATGCTCCCGCTaGGCCTGCTCCTCGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GWCSLCMRVVKVTDLGCFSSCSR*ACSSRA Trigger: GGCCCGCGAGGAGCAGGCCCAGCGGGAGCATGAGGA...AAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCACCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | ACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTAGTGCGTAGGCCCACCTaGGAAGCCAGGTCTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: TAWPHHHFPRMVGRDEDVVRRPT*EARSSK Trigger: CTTGGAAGACCTGGCTTCCCAGGTGGGCCTACGCAC...TACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | TTCTGCCACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTAGGGCAAGCTCGGCGATaGACACCCGGCCCCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: FCHTKPHQAQQYSQAFNLGQARR*TPGPAV Trigger: GACAGCGGGGCCGGGTGTCCATCGCCGAGCTTGCCC...TAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGTGGCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | ACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTAAGGGAGTTGCTGGCTTaGGCAAGCTCGGCGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: TAWPHHHFPRMVGRDEDVRELLA*ASSAMD Trigger: GTCCATCGCCGAGCTTGCCCAAGCCAGCAACTCCCT...TACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR TCA 90 bp | CTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTATCCTCCTGGGCTAGGATaGCAGCTTCCTCCTCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LPGHTITSPGWWGGMKMYPPGLG*QLPPRS Trigger: AGAACGAGGAGGAAGCTGTCATCCTAGCCCAGGAGG...ATACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | GTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCAGAGTGATTTGTGCAGTGGCTCTTaGCCGGCTGATGCCGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VVKVTDLGCFGHRGWQSDLCSGS*PADAAR Trigger: CCGGGCGGCATCAGCCGGCCAAGAGCCACTGCACAA...ATCACTCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR TCA 90 bp | AGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCAGAGTACACAGGCGCCACCATaGCGAGGGCCTCAGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RVVKVTDLGCFGHRGWQSTQAPP*RGPQCR Trigger: TCTGCACTGAGGCCCTCGTCATGGTGGCGCCTGTGT...ACTCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR TCA 90 bp | ACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTAAGGCCACACCAACTCTaGGTCCAAGAGGGAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: TAWPHHHFPRMVGRDEDVRPHQL*VQEGRT Trigger: AGTCCTTCCCTCTTGGACTCAGAGTTGGTGTGGCCT...TACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR TCA 90 bp | AGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCAGAGTGTTCCAGGGCTTACCTaGGTGCGTAGGCCCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: RVVKVTDLGCFGHRGWQSVPGLT*VRRPTW Trigger: CCAGGTGGGCCTACGCACTCAGGTAAGCCCTGGAAC...ACTCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | TGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGTCAGTGCAGAACCACTaGGTCCACCCTGAGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: CMRVVKVTDLGCFGHRGWSVQNH*VHPEAG Trigger: CCCGGCCTCAGGGTGGACGCAGTGGTTCTGCACTGA...CCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | GCTTCCAAGGGACCCTCCCCACCTCTCGGATATATTCTGAAGCCTAAATTTCACTTGTGCAGTGGCTCTTaGCCGGCTGATGCCGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ASKGPSPPLGYILKPKFHLCSGS*PADAAR Trigger: CCGGGCGGCATCAGCCGGCCAAGAGCCACTGCACAA...GTGAAATTTAGGCTTCAGAATATATCCGAGAGGTGGGGAGGGTCCCTTGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | CCTTTAATCTATAACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGCACTCAGCTTCGCGCTaGGACTCGAGTCGTTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PLIYNCLATPSLPQDGGEHSASR*DSSRFR Trigger: GCGGAAACGACTCGAGTCCCAGCGCGAAGCTGAGTG...CTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR TCA 90 bp | TTCTGCCACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTAACACAGGCGCCACCATaGCGAGGGCCTCAGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FCHTKPHQAQQYSQAFNLTQAPP*RGPQCR Trigger: TCTGCACTGAGGCCCTCGTCATGGTGGCGCCTGTGT...TAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGTGGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR GCA 90 bp | TGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGACGTTCAGCCTCCTCTaGCTCACGCTGGGCCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: CMRVVKVTDLGCFGHRGWTFSLL*LTLGLS Trigger: CGAAAGGCCCAGCGTGAGGCAGAGGAGGCTGAACGT...CCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | AGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCAGAGTCAGGGCTTACCTGAGTaGGTAGGCCCACCTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RVVKVTDLGCFGHRGWQSQGLPE*VGPPGK Trigger: CTTCCCAGGTGGGCCTACGCACTCAGGTAAGCCCTG...ACTCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | GTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCAGAGTGATCACTCAGCTTCGCGCTaGGACTCGAGTCGTTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: VVKVTDLGCFGHRGWQSDHSASR*DSSRFR Trigger: GCGGAAACGACTCGAGTCCCAGCGCGAAGCTGAGTG...ATCACTCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | ACTCACAGGCCTTTAATCTATAACTGCCTGGCCACACCATCACTTCCCCAGGATCCAAGAGGGAAGGACTaGGGTCAGGCTGGGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: THRPLIYNCLATPSLPQDPRGKD*GQAGAW Trigger: CCAAGCCCCAGCCTGACCCCAGTCCTTCCCTCTTGG...ATCCTGGGGAAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGGCCTGTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR TCA 90 bp | GTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCAGAGTGATCCTCCTGGGCTAGGATaGCAGCTTCCTCCTCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VVKVTDLGCFGHRGWQSDPPGLG*QLPPRS Trigger: AGAACGAGGAGGAAGCTGTCATCCTAGCCCAGGAGG...ATCACTCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | TTCTGCCACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTAGCCAGCTCCTCATTGTaGAGTGGCTCTTGGCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: FCHTKPHQAQQYSQAFNLASSSL*SGSWPA Trigger: AGCCGGCCAAGAGCCACTGCACAATGAGGAGCTGGC...TAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGTGGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR GCA 90 bp | GGCTGGTGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTCTCCTCGTTCTCATCTaGTTCTGCCCAGGCCACCCG | + |
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Preference number: 4 (lower is better) Translates to: GWCSLCMRVVKVTDLGCFLLVLI*FCPGHP Trigger: CGGGTGGCCTGGGCAGAAGCAGATGAGAACGAGGAG...AAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCACCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | TGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACGACCCCTGGCCACACTaGACACAGCAGGCCACGTTC | + |
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Preference number: 4 (lower is better) Translates to: CSLCMRVVKVTDLGCFGHDPWPH*TQQATF Trigger: GAACGTGGCCTGCTGTGTGCAGTGTGGCCAGGGGTC...GTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | GGCTGGTGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGTGCGTAGGCCCACCTaGGAAGCCAGGTCTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: GWCSLCMRVVKVTDLGCFVRRPT*EARSSK Trigger: CTTGGAAGACCTGGCTTCCCAGGTGGGCCTACGCAC...AAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCACCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | ATAACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATCCTGGATGCGATTTATaGTGTCCTGAGTGCGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: ITAWPHHHFPRMVGRDEDPGCDL*CPECVG Trigger: GCCTACGCACTCAGGACACCATAAATCGCATCCAGG...ATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | CTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTATGGCGGCCAGTTCCTCTaGGGTTATGTAGATGAACTT | + |
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Preference number: 4 (lower is better) Translates to: LPGHTITSPGWWGGMKMYGGQFL*GYVDEL Trigger: AAGTTCATCTACATAACCCCAGAGGAACTGGCCGCC...ATACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | ACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTAACTTCCCCAGGATGGTaGGGAGGGATGAAGATGTAT | + |
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Preference number: 4 (lower is better) Translates to: TAWPHHHFPRMVGRDEDVTSPGW*GGMKMY Trigger: ATACATCTTCATCCCTCCCCACCATCCTGGGGAAGT...TACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | CGGGGCAGTGATGTTTGCAACACAGGCTGGTGCAGTCTGTGCATGAGAGTTGTCCTACTCACTCTTGGTTaGGGACAAGGTAGACGGTGC | + |
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Preference number: 4 (lower is better) Translates to: RGSDVCNTGWCSLCMRVVLLTLG*GQGRRC Trigger: GCACCGTCTACCTTGTCCCCAACCAAGAGTGAGTAG...GACAACTCTCATGCACAGACTGCACCAGCCTGTGTTGCAAACATCACTGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR TCA 90 bp | TGGATTCATAATAAGAACAGGACTTCACCAGCTTCCAAGGGACCCTCCCCACCTCGATTTATGGTGTCCTaGGTGCGTAGGCCCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: WIHNKNRTSPASKGPSPPRFMVS*VRRPTW Trigger: CCAGGTGGGCCTACGCACTCAGGACACCATAAATCG...AGGTGGGGAGGGTCCCTTGGAAGCTGGTGAAGTCCTGTTCTTATTATGAATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR TCA 90 bp | CCTTTAATCTATAACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGCTGGGGTTATGTAGATaGACTTGCCCCGGTCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: PLIYNCLATPSLPQDGGELGLCR*TCPGRQ Trigger: TTGACGACCGGGGCAAGTTCATCTACATAACCCCAG...CTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR GCA 90 bp | TGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACGCCAGCTCCTCATTGTaGAGTGGCTCTTGGCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: CSLCMRVVKVTDLGCFGHASSSL*SGSWPA Trigger: AGCCGGCCAAGAGCCACTGCACAATGAGGAGCTGGC...GTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | ACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCCTCCTCGTTCTCATCTaGTTCTGCCCAGGCCACCCG | + |
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Preference number: 4 (lower is better) Translates to: TPSHTKLSSTHRPLIYNCLLVLI*FCPGHP Trigger: CGGGTGGCCTGGGCAGAAGCAGATGAGAACGAGGAG...GCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR GCA 90 bp | CGGGGCAGTGATGTTTGCAACACAGGCTGGTGCAGTCTGTGCATGAGAGTTGTCTGCAACACAGGCTGGTaGAGTCTGTGCATGAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: RGSDVCNTGWCSLCMRVVCNTGW*SLCMRV Trigger: AACTCTCATGCACAGACTGCACCAGCCTGTGTTGCA...GACAACTCTCATGCACAGACTGCACCAGCCTGTGTTGCAAACATCACTGCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | TGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCGGGGCAGTGATGTTTaGAACACAGGCTGGTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: CMRVVKVTDLGCFGHRGWRGSDV*NTGWCS Trigger: ACTGCACCAGCCTGTGTTGCAAACATCACTGCCCCG...CCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | CTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCCAGGTGAGTTTCCGCTaGCTTCTCGACACCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCMRVVKVTDLGCFGHRGQVSFR*LLDTFL Trigger: GAGGAAGGTGTCGAGAAGCCAGCGGAAACTCACCTG...GCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | GCTTCCAAGGGACCCTCCCCACCTCTCGGATATATTCTGAAGCCTAAATTTCACTCCTCTGCCTCACGCTaGGCCTTTCGCGCTTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ASKGPSPPLGYILKPKFHSSASR*AFRACF Trigger: GAAACAAGCGCGAAAGGCCCAGCGTGAGGCAGAGGA...GTGAAATTTAGGCTTCAGAATATATCCGAGAGGTGGGGAGGGTCCCTTGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | ATAACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATTCTGTCAGGAAGCTCTaGGACTGTTCCTCAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: ITAWPHHHFPRMVGRDEDSVRKL*DCSSVM Trigger: CATGACTGAGGAACAGTCCCAGAGCTTCCTGACAGA...ATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR GCA 90 bp | TTCTGCCACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTATTATGGTGTCCTGAGTaGGTAGGCCCACCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FCHTKPHQAQQYSQAFNLLWCPE*VGPPGK Trigger: CTTCCCAGGTGGGCCTACGCACTCAGGACACCATAA...TAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGTGGCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR GCA 90 bp | TGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACGCAGGATTCCCAGGGTaGCAGGAGACTTCTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCMRVVKVTDLGCFGHAGFPG*QETSVH Trigger: GTGCACAGAAGTCTCCTGGCACCCTGGGAATCCTGC...GTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | TGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGGTAACTGATTTGGGCTaGTTTGGTCACAGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CMRVVKVTDLGCFGHRGWVTDLG*FGHRGW Trigger: CCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTAC...CCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | TGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACTCCTCTGCCTCACGCTaGGCCTTTCGCGCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCMRVVKVTDLGCFGHSSASR*AFRACF Trigger: GAAACAAGCGCGAAAGGCCCAGCGTGAGGCAGAGGA...GTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR TCA 90 bp | ACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCATTTTCCCCGACAGGTaGGTTTCCGCTGGCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: TPSHTKLSSTHRPLIYNCIFPDR*VSAGFS Trigger: CGAGAAGCCAGCGGAAACTCACCTGTCGGGGAAAAT...GCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR TCA 90 bp | GGCTGGTGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTTTAGAAGCGGGGCAGTaGTGTTTGCAACACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWCSLCMRVVKVTDLGCFLEAGQ*CLQHRL Trigger: CAGCCTGTGTTGCAAACATCACTGCCCCGCTTCTAA...AAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCACCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | ACTGCCTGGCCACACCATCACTTCCCCAGGATGGTGGGGAGGGATGAAGATGTACCTTTAATCTATAACTaGCTGGCCACACCATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TAWPHHHFPRMVGRDEDVPLIYN*LATPSL Trigger: AAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGG...TACATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | ACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCCAGGTGAGTTTCCGCTaGCTTCTCGACACCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPSHTKLSSTHRPLIYNCQVSFR*LLDTFL Trigger: GAGGAAGGTGTCGAGAAGCCAGCGGAAACTCACCTG...GCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | GTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCAGAGTGATACTGTTCCTCAGTCATaGTCTCTCCTACGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VVKVTDLGCFGHRGWQSDTVPQS*SLLRLP Trigger: AGGAAGGCGTAGGAGAGACCATGACTGAGGAACAGT...ATCACTCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | GTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCAGAGTGATGTTTGCAACACAGGCTaGTGCAGTCTGTGCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVKVTDLGCFGHRGWQSDVCNTG*CSLCMR Trigger: TCTCATGCACAGACTGCACCAGCCTGTGTTGCAAAC...ATCACTCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | CTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCCTGGCCACACCATCACTTCCAGCAGGTCCTGGATaGGATTTATGGTGTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSTHRPLIYNCLATPSLPAGPG*DLWCPE Trigger: CTCAGGACACCATAAATCGCATCCAGGACCTGCTGG...AAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | TTCTGCCACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTAACTGTTCCTCAGTCATaGTCTCTCCTACGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FCHTKPHQAQQYSQAFNLTVPQS*SLLRLP Trigger: AGGAAGGCGTAGGAGAGACCATGACTGAGGAACAGT...TAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGTGGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCCTGGCCACACCATCACTTTCAGCCAGCAGGTCCTaGATGCGATTTATGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSTHRPLIYNCLATPSLSASRS*MRFMVS Trigger: GGACACCATAAATCGCATCCAGGACCTGCTGGCTGA...AAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CCA 90 bp | ACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCATCACTTCCCCAGGATaGTGGGGAGGGATGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TPSHTKLSSTHRPLIYNCITSPG*WGGMKM Trigger: CATCTTCATCCCTCCCCACCATCCTGGGGAAGTGAT...GCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR TCA 90 bp | CTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCAGTTGTCAAGGTAACTaGTTTGGGCTGCTTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCMRVVKVTDLGCFGHRGSCQGN*FGLLWS Trigger: TGACCAAAGCAGCCCAAATCAGTTACCTTGACAACT...GCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | TGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACGGCTGGTGCAGTCTGTaGATGAGAGTTGTCAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSLCMRVVKVTDLGCFGHGWCSL*MRVVKV Trigger: TACCTTGACAACTCTCATGCACAGACTGCACCAGCC...GTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CCA 90 bp | TGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACTCTGTCAGGAAGCTCTaGGACTGTTCCTCAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: CSLCMRVVKVTDLGCFGHSVRKL*DCSSVM Trigger: CATGACTGAGGAACAGTCCCAGAGCTTCCTGACAGA...GTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR GCA 90 bp | GTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCAGAGTGATGGACAAGGTAGACGGTaGATCAAGACTCTATCTTTA | + |
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Preference number: 4 (lower is better) Translates to: VVKVTDLGCFGHRGWQSDGQGRR*IKTLSL Trigger: TAAAGATAGAGTCTTGATGCACCGTCTACCTTGTCC...ATCACTCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR TCA 90 bp | ACTCACAGGCCTTTAATCTATAACTGCCTGGCCACACCATCACTTCCCCAGGATCTCTCGGATATATTCTaGAGCCTAAATTTCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: THRPLIYNCLATPSLPQDLSDIF*SLNFTC Trigger: GCAGGTGAAATTTAGGCTTCAGAATATATCCGAGAG...ATCCTGGGGAAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGGCCTGTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS GCA 90 bp | CTGCCCAGGCCACCCGCTGGGCTCGACGCTGGGCCTGTAGGCGGCTaGCCAGGTCCCTCCGGCGCCGAGGCCTGCCTCCAGCTCTCGGCT | + |
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Preference number: 5 (lower is better) Translates to: LPRPPAGLDAGPVGG*PGPSGAEACLQLSA Trigger: AGCCGAGAGCTGGAGGCAGGCCTCGGCGCCGGAGGGACCTGGGCAGCCGCCTACAGGCCCAGCGTCGAGCCCAGCGGGTGGCCTGGGCAG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS CCA 90 bp | ACAGCTTCCTCCTCGTTCTCATCTGCTTCTGCCCAGGCCACCCGCTaGGCTCGACGCTGGGCCTGTAGGCGGCTGCCCAGGTCCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TASSSFSSASAQATR*ARRWACRRLPRSLR Trigger: CCGGAGGGACCTGGGCAGCCGCCTACAGGCCCAGCGTCGAGCCCAGCGGGTGGCCTGGGCAGAAGCAGATGAGAACGAGGAGGAAGCTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS GCA 90 bp | CGCTGGGCCTGCTCCTCGCGGGCCTTCCTCTCCTCCTCCTCCTTCTaGTCCTCCTCCAGGCGAAGCCGCTCCTCCTCCTTCTTCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: RWACSSRAFLSSSSF*SSSRRSRSSSFFHS Trigger: TGAGTGGAAGAAGGAGGAGGAGCGGCTTCGCCTGGAGGAGGAGCAGAAGGAGGAGGAGGAGAGGAAGGCCCGCGAGGAGCAGGCCCAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS TCA 90 bp | CGACTAGCAGAGCCGCCGCTACCAAGTACCACACAGGCGCCACCATaGCGAGGGCCTCAGTGCAGAACCACTGCGTCCACCCTGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RLAEPPLPSTTQAPP*RGPQCRTTASTLRP Trigger: CGGCCTCAGGGTGGACGCAGTGGTTCTGCACTGAGGCCCTCGTCATGGTGGCGCCTGTGTGGTACTTGGTAGCGGCGGCTCTGCTAGTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS TCA 90 bp | CCCCTGGCCACACTGCACACAGCAGGCCACGTTCCAGGGCTTACCTaGGTGCGTAGGCCCACCTGGGAAGCCAGGTCTTCCAAGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PLATLHTAGHVPGLT*VRRPTWEARSSKST Trigger: TGTGCTCTTGGAAGACCTGGCTTCCCAGGTGGGCCTACGCACTCAGGTAAGCCCTGGAACGTGGCCTGCTGTGTGCAGTGTGGCCAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS GCA 90 bp | AAGGCCTCCTTCAGTTTCAGGTACTCCTCATGCTCCCGCTGGGCCTaGTCCTCGCGGGCCTTCCTCTCCTCCTCCTCCTTCTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KASFSFRYSSCSRWA*SSRAFLSSSSFCSS Trigger: GGAGGAGCAGAAGGAGGAGGAGGAGAGGAAGGCCCGCGAGGAGCAGGCCCAGCGGGAGCATGAGGAGTACCTGAAACTGAAGGAGGCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS CCA 90 bp | ACCACAAAGGCCTCCTTCAGTTTCAGGTACTCCTCATGCTCCCGCTaGGCCTGCTCCTCGCGGGCCTTCCTCTCCTCCTCCTCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TTKASFSFRYSSCSR*ACSSRAFLSSSSFC Trigger: GCAGAAGGAGGAGGAGGAGAGGAAGGCCCGCGAGGAGCAGGCCCAGCGGGAGCATGAGGAGTACCTGAAACTGAAGGAGGCCTTTGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS GCA 90 bp | TGGCCACACTGCACACAGCAGGCCACGTTCCAGGGCTTACCTGAGTaGGTAGGCCCACCTGGGAAGCCAGGTCTTCCAAGAGCACAACCT | + |
|
Preference number: 5 (lower is better) Translates to: WPHCTQQATFQGLPE*VGPPGKPGLPRAQP Trigger: AGGTTGTGCTCTTGGAAGACCTGGCTTCCCAGGTGGGCCTACGCACTCAGGTAAGCCCTGGAACGTGGCCTGCTGTGTGCAGTGTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS CCA 90 bp | CCGGCCCCGCTGTCGGATGAAGTTGGCCACGGCGGCCAGTTCCTCTaGGGTTATGTAGATGAACTTGCCCCGGTCGTCAATCACACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PAPLSDEVGHGGQFL*GYVDELAPVVNHTC Trigger: ACAGGTGTGATTGACGACCGGGGCAAGTTCATCTACATAACCCCAGAGGAACTGGCCGCCGTGGCCAACTTCATCCGACAGCGGGGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000496781.1 |
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| CDS-3UTR CAA 90 bp | CGGGGCAGTGATGTTTGCAACACAGGCTGGTGCAGTCTGTGCATGAGAGTTGTCCCTGCCAGCTCCTCATaGTGCAGTGGCTCTTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RGSDVCNTGWCSLCMRVVPASSS*CSGSWP Trigger: CGGCCAAGAGCCACTGCACAATGAGGAGCTGGCAGG...GACAACTCTCATGCACAGACTGCACCAGCCTGTGTTGCAAACATCACTGCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS TCA 90 bp | TCCTCCAGCTTCCGCAGTTTCTTAGCTCCAATTTTCCCCGACAGGTaGGTTTCCGCTGGCTTCTCGACACCTTCCTCCTCCTGGGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSFRSFLAPIFPDR*VSAGFSTPSSSWAR Trigger: CCTAGCCCAGGAGGAGGAAGGTGTCGAGAAGCCAGCGGAAACTCACCTGTCGGGGAAAATTGGAGCTAAGAAACTGCGGAAGCTGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS-3UTR CAA 90 bp | CTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCCTGGGCCTTTCGCGCTaGTTTCTCCTCCAGCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LCMRVVKVTDLGCFGHRGLGLSR*FLLQLP Trigger: CGGAAGCTGGAGGAGAAACAAGCGCGAAAGGCCCAG...GCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS-3UTR CAA 90 bp | ACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCCGCTGTCGGATGAAGTaGGCCACGGCGGCCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPSHTKLSSTHRPLIYNCRCRMK*ATAASS Trigger: GGAACTGGCCGCCGTGGCCAACTTCATCCGACAGCG...GCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CAA 90 bp | ACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCCCTGCCAGCTCCTCATaGTGCAGTGGCTCTTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TPSHTKLSSTHRPLIYNCPASSS*CSGSWP Trigger: CGGCCAAGAGCCACTGCACAATGAGGAGCTGGCAGG...GCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CAA 90 bp | TGGATTCATAATAAGAACAGGACTTCACCAGCTTCCAAGGGACCCTCCCCACCTCTGGGCCTTTCGCGCTaGTTTCTCCTCCAGCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WIHNKNRTSPASKGPSPPLGLSR*FLLQLP Trigger: CGGAAGCTGGAGGAGAAACAAGCGCGAAAGGCCCAG...AGGTGGGGAGGGTCCCTTGGAAGCTGGTGAAGTCCTGTTCTTATTATGAATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CAA 90 bp | ACACCAAGCCACACCAAGCTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCGAGGGAGTTGCTGGCTaGGGCAAGCTCGGCGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: TPSHTKLSSTHRPLIYNCEGVAG*GKLGDG Trigger: TCCATCGCCGAGCTTGCCCAAGCCAGCAACTCCCTC...GCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAGCTTGGTGTGGCTTGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CAA 90 bp | CTCAGCAGTACTCACAGGCCTTTAATCTATAACTGCCTGGCCACACCATCACTTCAGGCGATGAGGGAGTaGCTGGCTTGGGCAAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LSSTHRPLIYNCLATPSLQAMRE*LAWASS Trigger: CGAGCTTGCCCAAGCCAGCAACTCCCTCATCGCCTG...AAGTGATGGTGTGGCCAGGCAGTTATAGATTAAAGGCCTGTGAGTACTGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354488.8 |
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| CDS-3UTR CAA 90 bp | TGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCTGGCTGATTTGGGCTGCTTaGGTCACAGGGGCTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CMRVVKVTDLGCFGHRGWLIWAA*VTGAGR Trigger: TCTGCCAGCCCCTGTGACCAAAGCAGCCCAAATCAG...CCAGCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS GCA 90 bp | AAATCTCTTTATTTCCCTCTCATGCCACGCCCAAATGTGACTCTGTaGTTTGCCTTTGGAAGGGCCCTGGGTAGAAGGGGCTCTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KSLYFPLMPRPNVTL*FAFGRALGRRGSGP Trigger: AGGACCAGAGCCCCTTCTACCCAGGGCCCTTCCAAAGGCAAAGCACAGAGTCACATTTGGGCGTGGCATGAGAGGGAAATAAAGAGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496781.1 |
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| CDS-3UTR CAA 90 bp | CTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGGTCACAGGGGCGTGCACTACTCACTCTaGGTTGGGGACAAGGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LCMRVVKVTDLGCFGHRGVHYSL*VGDKVD Trigger: GTCTACCTTGTCCCCAACCAAGAGTGAGTAGTGCAC...GCCCCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS CCA 90 bp | CGGTCGTCAATCACACCTGTTATAGTCCCCTCAGCCAGCAGGTCCTaGATGCGATTTATGGTGTCCTATGAGGAGAACAACTCTCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RSSITPVIVPSASRS*MRFMVSYEENNSQN Trigger: ATTCTGAGAGTTGTTCTCCTCATAGGACACCATAAATCGCATCCAGGACCTGCTGGCTGAGGGGACTATAACAGGTGTGATTGACGACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496781.1 |
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| CDS-3UTR CAA 90 bp | GGCTGGTGCAGTCTGTGCATGAGAGTTGTCAAGGTAACTGATTTGGGCTGCTTTGTCAAGGTAACTGATTaGGGCTGCTTTGGTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWCSLCMRVVKVTDLGCFVKVTD*GCFGHR Trigger: CCTGTGACCAAAGCAGCCCAAATCAGTTACCTTGAC...AAAGCAGCCCAAATCAGTTACCTTGACAACTCTCATGCACAGACTGCACCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS TCA 90 bp | AACTCTCAGAATAGAGATAGGCACCAATGTCCCCAGAAAAAGCACTaGAACCTCCCTCCCACTACAGCCAAATCTCTTTATTTCCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: NSQNRDRHQCPQKKH*NLPPTTAKSLYFPL Trigger: GAGAGGGAAATAAAGAGATTTGGCTGTAGTGGGAGGGAGGTTTCAGTGCTTTTTCTGGGGACATTGGTGCCTATCTCTATTCTGAGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000496781.1 |
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| CDS CCA 72 bp | TCTGCTTCTGCCCAGGCCACCCGCTGGGCTCGACGCTaGGCCTGTAGGCGGCTGCCCAGGTCCCTCCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SASAQATRWARR*ACRRLPRSLRR Trigger: GCGCCGGAGGGACCTGGGCAGCCGCCTACAGGCCCAGCGTCGAGCCCAGCGGGTGGCCTGGGCAGAAGCAGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS CAA 72 bp | GGACTCCCGGCCCCAGGCGATGAGGGAGTTGCTGGCTaGGGCAAGCTCGGCGATGGACACCCGGCCCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: GLPAPGDEGVAG*GKLGDGHPAPL Trigger: CAGCGGGGCCGGGTGTCCATCGCCGAGCTTGCCCAAGCCAGCAACTCCCTCATCGCCTGGGGCCGGGAGTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000354488.8 ENST00000470203.1 ENST00000496781.1 |
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| CDS CCA 72 bp | GACTCCCGGCCCCAGGCGATGAGGGAGTTGCTGGCTTaGGCAAGCTCGGCGATGGACACCCGGCCCCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: DSRPQAMRELLA*ASSAMDTRPRC Trigger: ACAGCGGGGCCGGGTGTCCATCGCCGAGCTTGCCCAAGCCAGCAACTCCCTCATCGCCTGGGGCCGGGAGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000354488.8 ENST00000470203.1 ENST00000496781.1 |
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| CDS CAA 72 bp | TGGGCAGGGGACTCCCGGCCCCAGGCGATGAGGGAGTaGCTGGCTTGGGCAAGCTCGGCGATGGACACCCGG | + |
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Preference number: 6 (lower is better) Translates to: WAGDSRPQAMRE*LAWASSAMDTR Trigger: CCGGGTGTCCATCGCCGAGCTTGCCCAAGCCAGCAACTCCCTCATCGCCTGGGGCCGGGAGTCCCCTGCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000354488.8 ENST00000470203.1 ENST00000496781.1 |
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| CDS CCA 72 bp | TCCTCGTTCTCATCTGCTTCTGCCCAGGCCACCCGCTaGGCTCGACGCTGGGCCTGTAGGCGGCTGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSFSSASAQATR*ARRWACRRLPR Trigger: CCTGGGCAGCCGCCTACAGGCCCAGCGTCGAGCCCAGCGGGTGGCCTGGGCAGAAGCAGATGAGAACGAGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS TCA 72 bp | CAAGCTCGGCGATGGACACCCGGCCCCGCTGTCGGATaGAGTTGGCCACGGCGGCCAGTTCCTCTGGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: QARRWTPGPAVG*SWPRRPVPLGL Trigger: TAACCCCAGAGGAACTGGCCGCCGTGGCCAACTTCATCCGACAGCGGGGCCGGGTGTCCATCGCCGAGCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000354488.8 ENST00000470203.1 ENST00000496781.1 |
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| CDS TCA 72 bp | GAGCCGCCGCTACCAAGTACCACACAGGCGCCACCATaGCGAGGGCCTCAGTGCAGAACCACTGCGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: EPPLPSTTQAPP*RGPQCRTTAST Trigger: GGTGGACGCAGTGGTTCTGCACTGAGGCCCTCGTCATGGTGGCGCCTGTGTGGTACTTGGTAGCGGCGGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS GCA 72 bp | AGGTCCTCTCTGCTAGCCACAGACCCCTGGCCACACTaGACACAGCAGGCCACGTTCCAGGGCTTACCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RSSLLATDPWPH*TQQATFQGLPE Trigger: CTCAGGTAAGCCCTGGAACGTGGCCTGCTGTGTGCAGTGTGGCCAGGGGTCTGTGGCTAGCAGAGAGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380201.2 |
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| CDS CCA 72 bp | AGCCGCTCCTCCTCCTTCTTCCACTCAGCTTCGCGCTaGGACTCGAGTCGTTTCCGCTCCTCACGTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SRSSSFFHSASR*DSSRFRSSRSA Trigger: GGCTGAACGTGAGGAGCGGAAACGACTCGAGTCCCAGCGCGAAGCTGAGTGGAAGAAGGAGGAGGAGCGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS TCA 72 bp | TGGCCACGGCGGCCAGTTCCTCTGGGGTTATGTAGATaGACTTGCCCCGGTCGTCAATCACACCTGAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: WPRRPVPLGLCR*TCPGRQSHLSA Trigger: CGCACTCAGGTGTGATTGACGACCGGGGCAAGTTCATCTACATAACCCCAGAGGAACTGGCCGCCGTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000470203.1 |
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| CDS CAA 72 bp | TTCAGCCTCCTCTGCCTCACGCTGGGCCTTTCGCGCTaGTTTCTCCTCCAGCTTCCGCAGTTTCTTAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSLLCLTLGLSR*FLLQLPQFLSS Trigger: GGAGCTAAGAAACTGCGGAAGCTGGAGGAGAAACAAGCGCGAAAGGCCCAGCGTGAGGCAGAGGAGGCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS CCA 72 bp | CTGTCGGATGAAGTTGGCCACGGCGGCCAGTTCCTCTaGGGTTATGTAGATGAACTTGCCCCGGTCGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: LSDEVGHGGQFL*GYVDELAPVVN Trigger: ATTGACGACCGGGGCAAGTTCATCTACATAACCCCAGAGGAACTGGCCGCCGTGGCCAACTTCATCCGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354488.8 ENST00000470203.1 ENST00000496781.1 |
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| CDS TCA 72 bp | TTCCGCAGTTTCTTAGCTCCAATTTTCCCCGACAGGTaGGTTTCCGCTGGCTTCTCGACACCTTCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FRSFLAPIFPDR*VSAGFSTPSSS Trigger: GGAGGAGGAAGGTGTCGAGAAGCCAGCGGAAACTCACCTGTCGGGGAAAATTGGAGCTAAGAAACTGCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000354488.8 ENST00000380201.2 |
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| CDS CCA 72 bp | ATCACACCTGTTATAGTCCCCTCAGCCAGCAGGTCCTaGATGCGATTTATGGTGTCCTATGAGGAGAACAAC | + |
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Preference number: 6 (lower is better) Translates to: ITPVIVPSASRS*MRFMVSYEENN Trigger: GTTGTTCTCCTCATAGGACACCATAAATCGCATCCAGGACCTGCTGGCTGAGGGGACTATAACAGGTGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496781.1 |
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