Pregenerated sensors for DDR1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000223405, ENSG00000224360, ENSG00000236492Ensembl transcript IDs: ENST00000414662.1, ENST00000415153.1, ENST00000437716.1, ENST00000453209.1, ENST00000455945.1, ENST00000458361.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCAGTAAGGAGCCGACAAAATGGCACCCTCCGAGAGAGTTCATTTaGATAATAAGCTTAGGGTGGGGCGGCCAGCCTTCCCAGCTATGT | + |
|
Preference number: 5 (lower is better) Translates to: CSKEPTKWHPPREFI*IISLGWGGQPSQLC Trigger: ACATAGCTGGGAAGGCTGGCCGCCCCACCCTAAGCTTATTATGCAAATGAACTCTCTCGGAGGGTGCCATTTTGTCGGCTCCTTACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 90 bp | CATCCCTTCTCTGTCAGCCACAGGTGCAGTAAGGAGCCGACAAAATaGCACCCTCCGAGAGAGTTCATTTGCATAATAAGCTTAGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPFSVSHRCSKEPTK*HPPREFICIISLGW Trigger: CCACCCTAAGCTTATTATGCAAATGAACTCTCTCGGAGGGTGCCATTTTGTCGGCTCCTTACTGCACCTGTGGCTGACAGAGAAGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 90 bp | GGGGAAGGAATGCATTCCTCGGGGGAGGTCTGTAGATGGCTGCTCTaGGAGTGTCTGTCTTATGTGGTTGAGATAAGGACTGAAATATGC | + |
|
Preference number: 5 (lower is better) Translates to: GEGMHSSGEVCRWLL*ECLSYVVEIRTEIC Trigger: GCATATTTCAGTCCTTATCTCAACCACATAAGACAGACACTCCCAGAGCAGCCATCTACAGACCTCCCCCGAGGAATGCATTCCTTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000415153.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 90 bp | AAATGGCACCCTCCGAGAGAGTTCATTTGCATAATAAGCTTAGGGTaGGGCGGCCAGCCTTCCCAGCTATGTAAACAAACACCTGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: KWHPPREFICIISLG*GGQPSQLCKQTPDQ Trigger: TTGATCAGGTGTTTGTTTACATAGCTGGGAAGGCTGGCCGCCCCACCCTAAGCTTATTATGCAAATGAACTCTCTCGGAGGGTGCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 90 bp | TCATCATCACTTGCTGCTTCACCTCGCACTTTTATGTTATGGAGCTaGCCTTCTTTGGTTTGGGTGGCAAGGAGAGAAGGTTGGGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLAASPRTFMLWS*PSLVWVARREGWGL Trigger: CAAACCCCAACCTTCTCTCCTTGCCACCCAAACCAAAGAAGGCCAGCTCCATAACATAAAAGTGCGAGGTGAAGCAGCAAGTGATGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 90 bp | GCTTCTTCATCATCACTTGCTGCTTCACCTCGCACTTTTATGTTATaGAGCTGGCCTTCTTTGGTTTGGGTGGCAAGGAGAGAAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSSSLAASPRTFML*SWPSLVWVARREGW Trigger: CCAACCTTCTCTCCTTGCCACCCAAACCAAAGAAGGCCAGCTCCATAACATAAAAGTGCGAGGTGAAGCAGCAAGTGATGATGAAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS TCA 90 bp | CAGCCTTCCCAGCTATGTAAACAAACACCTGATCAAACCAATCTGTaGGTCCTAAGTAAATCAGACGCCGCCTCCTCAAGCTGGACTATA | + |
|
Preference number: 5 (lower is better) Translates to: QPSQLCKQTPDQTNL*VLSKSDAASSSWTI Trigger: TATAGTCCAGCTTGAGGAGGCGGCGTCTGATTTACTTAGGACTCACAGATTGGTTTGATCAGGTGTTTGTTTACATAGCTGGGAAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS TCA 90 bp | AAGAGAGTCAGACTGTCCTTTGAAGCTTTGAAGCCAGGCAGGCATTaGCTTTTCCTCTGTAGCTATGAATGTCCTAGATGGCCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KRVRLSFEALKPGRH*LFLCSYECPRWPLL Trigger: AAGAAGAGGCCATCTAGGACATTCATAGCTACAGAGGAAAAGTCAATGCCTGCCTGGCTTCAAAGCTTCAAAGGACAGTCTGACTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS GCA 90 bp | TTGATTCTATCCTGTAAACTGTCCTTGGAGTTTTCCCCAGGTGACTaGCCTCTGACTTCTTCACTTTGTGAATCAGTCCTTCACATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LILSCKLSLEFSPGD*PLTSSLCESVLHIF Trigger: GAAGATGTGAAGGACTGATTCACAAAGTGAAGAAGTCAGAGGGCAGTCACCTGGGGAAAACTCCAAGGACAGTTTACAGGATAGAATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS GCA 90 bp | CCCTCATCAGTAATTCTAATTTTGCCTTCGCTTTGTGATCTTTATTaGCCTTCGAAGCATGTGATCCTTGTGGCTTACTCCCTGTTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: PSSVILILPSLCDLY*PSKHVILVAYSLFV Trigger: TACGAACAGGGAGTAAGCCACAAGGATCACATGCTTCGAAGGGCAATAAAGATCACAAAGCGAAGGCAAAATTAGAATTACTGATGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 90 bp | CACAAAAATATCATTAATTTGTTGTGGGAAGTCAGGGACCCTGAATaGAGGGACCAGCTGGAGCCAAGGCAGAAGAACATAAATTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HKNIINLLWEVRDPE*RDQLEPRQKNINCE Trigger: TTCACAATTTATGTTCTTCTGCCTTGGCTCCAGCTGGTCCCTCCATTCAGGGTCCCTGACTTCCCACAACAAATTAATGATATTTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS GCA 90 bp | ACTGTGTTACCAAGCATGAAAACAACATTTATCTCCTTGTATCTCTaGATCAGAGCTCTTGGGTGGCCAACTACATTGTCAATGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TVLPSMKTTFISLYL*IRALGWPTTLSMSS Trigger: ACTGCTCATTGACAATGTAGTTGGCCACCCAAGAGCTCTGATGCAGAGATACAAGGAGATAAATGTTGTTTTCATGCTTGGTAACACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS GCA 90 bp | AACAGTGGGCTTAAAATATTCAACAAACCATGCTGTAAACAGATATaGTGTCATCCAAGCTTTGTTGTTCCATTTATAAAACACAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NSGLKIFNKPCCKQI*CHPSFVVPFIKHRQ Trigger: CTGCCTGTGTTTTATAAATGGAACAACAAAGCTTGGATGACAGCATATCTGTTTACAGCATGGTTTGTTGAATATTTTAAGCCCACTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS TCA 72 bp | CGTGTTAGCCAGGATGGTCTCGATCTCCTGACCCCGTaGTCCGCCCACCTCGCCCTCCCAGAGTGCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RVSQDGLDLLTP*SAHLALPECWD Trigger: ATCCCAGCACTCTGGGAGGGCGAGGTGGGCGGATCACGGGGTCAGGAGATCGAGACCATCCTGGCTAACACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000414662.1 ENST00000437716.1 ENST00000453209.1 |
||
| CDS GCA 72 bp | GAGCCGACAAAATGGCACCCTCCGAGAGAGTTCATTTaGATAATAAGCTTAGGGTGGGGCGGCCAGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EPTKWHPPREFI*IISLGWGGQPS Trigger: GGAAGGCTGGCCGCCCCACCCTAAGCTTATTATGCAAATGAACTCTCTCGGAGGGTGCCATTTTGTCGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 72 bp | GGGGAAGGAATGCATTCCTCGGGGGAGGTCTGTAGATaGCTGCTCTGGGAGTGTCTGTCTTATGTGGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GEGMHSSGEVCR*LLWECLSYVVE Trigger: CTCAACCACATAAGACAGACACTCCCAGAGCAGCCATCTACAGACCTCCCCCGAGGAATGCATTCCTTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000415153.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CAA 72 bp | GGAGCCGACAAAATGGCACCCTCCGAGAGAGTTCATTaGCATAATAAGCTTAGGGTGGGGCGGCCAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GADKMAPSERVH*HNKLRVGRPAF Trigger: GAAGGCTGGCCGCCCCACCCTAAGCTTATTATGCAAATGAACTCTCTCGGAGGGTGCCATTTTGTCGGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 72 bp | ATGCATTCCTCGGGGGAGGTCTGTAGATGGCTGCTCTaGGAGTGTCTGTCTTATGTGGTTGAGATAAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: MHSSGEVCRWLL*ECLSYVVEIRT Trigger: AGTCCTTATCTCAACCACATAAGACAGACACTCCCAGAGCAGCCATCTACAGACCTCCCCCGAGGAATGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000415153.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS TCA 72 bp | AAAGAGCAGCCTGTAAAATCGGGCTGCAGACATAGATaGCGGCAGTTGTGCCAATCGTGTTCAAAATGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: KEQPVKSGCRHR*RQLCQSCSKWR Trigger: CCGCCATTTTGAACACGATTGGCACAACTGCCGTCATCTATGTCTGCAGCCCGATTTTACAGGCTGCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000414662.1 ENST00000437716.1 ENST00000453209.1 |
||
| CDS CCA 72 bp | CCTCCGAGAGAGTTCATTTGCATAATAAGCTTAGGGTaGGGCGGCCAGCCTTCCCAGCTATGTAAACAAACA | + |
|
Preference number: 6 (lower is better) Translates to: PPREFICIISLG*GGQPSQLCKQT Trigger: TGTTTGTTTACATAGCTGGGAAGGCTGGCCGCCCCACCCTAAGCTTATTATGCAAATGAACTCTCTCGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 72 bp | ATGCATTCCTCGGGGGAGGTCTATAGATGGCTGCTCTaGGAGTGTCTGTCTTATGTGGTTGAGATAAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: MHSSGEVYRWLL*ECLSYVVEIRT Trigger: AGTCCTTATCTCAACCACATAAGACAGACACTCCCAGAGCAGCCATCTATAGACCTCCCCCGAGGAATGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414662.1 ENST00000453209.1 |
||
| CDS CCA 72 bp | ATGCATTCCTCCGGGGAGGTCTATAGATGGCTGCTCTaGGAGTGTCTGTCTTATGTGGTTGAGATAAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: MHSSGEVYRWLL*ECLSYVVEIRT Trigger: AGTCCTTATCTCAACCACATAAGACAGACACTCCCAGAGCAGCCATCTATAGACCTCCCCGGAGGAATGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437716.1 |
||
| CDS TCA 72 bp | AAAGAGCAGCCTGTAAAATCGGGCTGCAGACATAGATaGCGGCAGTTGTGCCAATCATGTTCAAAATGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: KEQPVKSGCRHR*RQLCQSCSKWR Trigger: CCGCCATTTTGAACATGATTGGCACAACTGCCGTCATCTATGTCTGCAGCCCGATTTTACAGGCTGCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000415153.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 72 bp | ATCATTAATTTGTTGTGGGAAGTCAGGGACCCTGAATaGAGGGACCAGCTGGAGCCAAGGCAGAAGAACATA | + |
|
Preference number: 6 (lower is better) Translates to: IINLLWEVRDPE*RDQLEPRQKNI Trigger: TATGTTCTTCTGCCTTGGCTCCAGCTGGTCCCTCCATTCAGGGTCCCTGACTTCCCACAACAAATTAATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 72 bp | TCATCACTTGCTGCTTCACCTCGCACTTTTATGTTATaGAGCTGGCCTTCTTTGGTTTGGGTGGCAAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSLAASPRTFML*SWPSLVWVARR Trigger: TCTCCTTGCCACCCAAACCAAAGAAGGCCAGCTCCATAACATAAAAGTGCGAGGTGAAGCAGCAAGTGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS TCA 72 bp | CCTCTAACAAGAGAGTCAGACTGTCCTTTGAAGCTTTaGAGCCAGGCAGGCATTGACTTTTCCTCTGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PLTRESDCPLKL*SQAGIDFSSVA Trigger: AGCTACAGAGGAAAAGTCAATGCCTGCCTGGCTTCAAAGCTTCAAAGGACAGTCTGACTCTCTTGTTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS TCA 72 bp | CAGCTATGTAAACAAACACCTGATCAAACCAATCTGTaGGTCCTAAGTAAATCAGACGCCGCCTCCTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QLCKQTPDQTNL*VLSKSDAASSS Trigger: GCTTGAGGAGGCGGCGTCTGATTTACTTAGGACTCACAGATTGGTTTGATCAGGTGTTTGTTTACATAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS TCA 72 bp | AGACTGTCCTTTGAAGCTTTGAAGCCAGGCAGGCATTaGCTTTTCCTCTGTAGCTATGAATGTCCTAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: RLSFEALKPGRH*LFLCSYECPRW Trigger: CCATCTAGGACATTCATAGCTACAGAGGAAAAGTCAATGCCTGCCTGGCTTCAAAGCTTCAAAGGACAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CAA 90 bp | TGTAGTCACCTTCACCAATTATCTTGGCTAGATCTTCTGGATAACTaGATGCAGCTTCTTCATCATCACTTGCTGCTTCACCTCGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: CSHLHQLSWLDLLDN*MQLLHHHLLLHLAL Trigger: AAGTGCGAGGTGAAGCAGCAAGTGATGATGAAGAAGCTGCATCAAGTTATCCAGAAGATCTAGCCAAGATAATTGGTGAAGGTGACTACA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CAA 72 bp | ACTGTGTTACCAAGCATGAAAACAACATTTATCTCCTaGTATCTCTGCATCAGAGCTCTTGGGTGGCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: TVLPSMKTTFIS*YLCIRALGWPT Trigger: AGTTGGCCACCCAAGAGCTCTGATGCAGAGATACAAGGAGATAAATGTTGTTTTCATGCTTGGTAACACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CAA 90 bp | AGAATGGACACTGTGTTACCAAGCATGAAAACAACATTTATCTCCTaGTATCTCTGCATCAGAGCTCTTGGGTGGCCAACTACATTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RMDTVLPSMKTTFIS*YLCIRALGWPTTLS Trigger: TGACAATGTAGTTGGCCACCCAAGAGCTCTGATGCAGAGATACAAGGAGATAAATGTTGTTTTCATGCTTGGTAACACAGTGTCCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS GCA 72 bp | GTAATTCTAATTTTGCCTTCGCTTTGTGATCTTTATTaGCCTTCGAAGCATGTGATCCTTGTGGCTTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: VILILPSLCDLY*PSKHVILVAYS Trigger: GGAGTAAGCCACAAGGATCACATGCTTCGAAGGGCAATAAAGATCACAAAGCGAAGGCAAAATTAGAATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CAA 72 bp | CTTCACCAATTATCTTGGCTAGATCTTCTGGATAACTaGATGCAGCTTCTTCATCATCACTTGCTGCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LHQLSWLDLLDN*MQLLHHHLLLH Trigger: GTGAAGCAGCAAGTGATGATGAAGAAGCTGCATCAAGTTATCCAGAAGATCTAGCCAAGATAATTGGTGAAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS CCA 72 bp | TTTATCTCCTTGTATCTCTGCATCAGAGCTCTTGGGTaGCCAACTACATTGTCAATGAGCAGTAATATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FISLYLCIRALG*PTTLSMSSNIL Trigger: CAAAATATTACTGCTCATTGACAATGTAGTTGGCCACCCAAGAGCTCTGATGCAGAGATACAAGGAGATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||
| CDS TCA 72 bp | AATTTTGAGGTAACAAGAAAAGATAACCATAAAGTCTaGCTGCTTGCAGGGTTGGGCAGAATAGAGCCATAT | + |
|
Preference number: 6 (lower is better) Translates to: NFEVTRKDNHKV*LLAGLGRIEPY Trigger: ATATGGCTCTATTCTGCCCAACCCTGCAAGCAGTCAGACTTTATGGTTATCTTTTCTTGTTACCTCAAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000414662.1 ENST00000437716.1 ENST00000453209.1 |
||
| CDS CAA 72 bp | AGAATGTACGTCACCTCAGGACCACTATTGTACAAATaGGTTGTAGAACATGTGTGTTTGAACAATATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RMYVTSGPLLYK*VVEHVCLNNMK Trigger: TTTCATATTGTTCAAACACACATGTTCTACAACCAATTTGTACAATAGTGGTCCTGAGGTGACGTACATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000414662.1 ENST00000415153.1 ENST00000437716.1 ENST00000453209.1 ENST00000455945.1 ENST00000458361.1 |
||