RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDN (Homo sapiens)

Ensembl gene IDs: ENSG00000181418

Ensembl transcript IDs: ENST00000421952.3

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTaGAAGGCGGGGGACCCGCGCTCGGGAACTAGGGATAGGATTGAG +
Preference number: 1 (lower is better)
Translates to: SGRPEACSRPRTAGD*KAGDPRSGTRDRIE
Trigger: CTCAATCCTATCCCTAGTTCCCGAGCGCGGGTCCCCCGCCTTGCAGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR GCA 90 bp CTGCCACCATCCCTGCCCTCCTGCCTGATCCTGGTTAGGCCTCTCTaGTCAGCTCCACACCCAGTGCATCAGCCCCTGCGAAGAGCTCAC +
Preference number: 1 (lower is better)
Translates to: LPPSLPSCLILVRPL*SAPHPVHQPLRRAH
Trigger: GTGAGCTCTTCGCAGGGGCTGATGCACTGGGTGTGGAGCTGAGCAGAGAGGCCTAACCAGGATCAGGCAGGAGGGCAGGGATGGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR GCA 90 bp TGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTaGTGGCTTCTGGTGACCGGCCTCTTTCCTTGCCTGGCCGGTTTC +
Preference number: 1 (lower is better)
Translates to: CARPVVAIESITPHA*WLLVTGLFPCLAGF
Trigger: GAAACCGGCCAGGCAAGGAAAGAGGCCGGTCACCAGAAGCCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CCA 90 bp GCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTaGCTTCTGGTGACCGGCCTCTTTCCTTGCCTGGCCGGTTTCTGG +
Preference number: 1 (lower is better)
Translates to: ARPVVAIESITPHAC*LLVTGLFPCLAGFW
Trigger: CCAGAAACCGGCCAGGCAAGGAAAGAGGCCGGTCACCAGAAGCCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR GCA 90 bp ATCACACCCCACGCCTGCTGGCTTCTGGTGACCGGCCTCTTTCCTTaGCTGGCCGGTTTCTGGAAGAGGCCAAGATGGGAGAAATTCTCA +
Preference number: 1 (lower is better)
Translates to: ITPHACWLLVTGLFP*LAGFWKRPRWEKFS
Trigger: TGAGAATTTCTCCCATCTTGGCCTCTTCCAGAAACCGGCCAGGCAAGGAAAGAGGCCGGTCACCAGAAGCCAGCAGGCGTGGGGTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CCA 90 bp CTATCTTGCCCTGCCTTGGGGAGCCCTCAACCAAACCTGGGAGACTaGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCAAGCCTTGG +
Preference number: 1 (lower is better)
Translates to: LSCPALGSPQPNLGD*DRSASLPYLFCKPW
Trigger: CCAAGGCTTGCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR TCA 90 bp TGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTCATCTaGTCACTCTGTCACCAGGTCCAAAGCCTCTCCTTCACTTTTTCC +
Preference number: 1 (lower is better)
Translates to: CCWTYASSPKNPSVI*SLCHQVQSLSFTFS
Trigger: GGAAAAAGTGAAGGAGAGGCTTTGGACCTGGTGACAGAGTGATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CCA 90 bp GACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGCCTaGAGAGGGAAAGTGACTGGCCTCAGTCAACCAGCAACTCAGTGG +
Preference number: 1 (lower is better)
Translates to: DLRIPSFYIPGGLEA*RGKVTGLSQPATQW
Trigger: CCACTGAGTTGCTGGTTGACTGAGGCCAGTCACTTTCCCTCTCCAGGCCTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR TCA 90 bp GTTCACTTATTCCCAATTCTCATTCTTGGCTTGTCGAGGGGAGGATaGGATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAA +
Preference number: 1 (lower is better)
Translates to: VHLFPILILGLSRGG*DRVLSKDLKMSETE
Trigger: TTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATCTCATCCTCCCCTCGACAAGCCAAGAATGAGAATTGGGAATAAGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp GCCTGCTCCCGGCCCCGCACGGCTGGAGACTGCAAGGCGGGGGACCCGCGCTCGGCCGGGATTAGCAACTaGGGAGATCCGCGACCTGCG +
Preference number: 2 (lower is better)
Translates to: ACSRPRTAGDCKAGDPRSAGISN*GDPRPA
Trigger: CGCAGGTCGCGGATCTCCCCAGTTGCTAATCCCGGC...CGAGCGCGGGTCCCCCGCCTTGCAGTCTCCAGCCGTGCGGGGCCGGGAGCAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 90 bp CACCACAGGCCAGGGTCAGTGACAGGGCCGCTATCTTGCCCTGCCTaGGGGAGCCCTCAACCAAACCTGGGAGACTGGGATAGGAGTGCC +
Preference number: 2 (lower is better)
Translates to: HHRPGSVTGPLSCPA*GSPQPNLGDWDRSA
Trigger: GGCACTCCTATCCCAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAGCGGCCCTGTCACTGACCCTGGCCTGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 90 bp GAGACTGCAAGGCGGGGGACCCGCGCTCGGGAACTAGGGATAGGATaGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCT +
Preference number: 2 (lower is better)
Translates to: ETARRGTRARELGIG*SGRAGISNWGDPRP
Trigger: AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCCTAGTTCCCGAGCGCGGGTCCCCCGCCTTGCAGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR GCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATGGCCCTACCCTACCCTaGCCTCCTATGGCTGCCACC +
Preference number: 2 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYGPTLP*PPMAAT
Trigger: GGTGGCAGCCATAGGAGGGCAGGGTAGGGTAGGGCC...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp TCTAGAAGTCTGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTAAGAATGGGGACCAGTaGACCCAAGGATGGATGCGT +
Preference number: 2 (lower is better)
Translates to: SRSLGGRRPAPGPARLETKNGDQ*TQGWMR
Trigger: ACGCATCCATCCTTGGGTCCACTGGTCCCCATTCTT...AGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCAGACTTCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR TCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCCCTGCCCTCCTGCCTaGTCCTGGTTAGGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYPCPPA*SWLGLS
Trigger: AGAGAGGCCTAACCAGGATCAGGCAGGAGGGCAGGG...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR TCA 90 bp TTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGACAGGCCAGGGTCAGTaGCAGGGCCGCTATCTTGCC +
Preference number: 2 (lower is better)
Translates to: LATGEIRDLRAPCSGYRETGQGQ*QGRYLA
Trigger: GGCAAGATAGCGGCCCTGTCACTGACCCTGGCCTGT...CTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR GCA 90 bp CTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCACTAAGGAGCATCGGGGTGCAGCTCCACACCCAGTaGATCAGCCCCTGCGAAGAG +
Preference number: 2 (lower is better)
Translates to: LGGRSWPRLRASLRSIGVQLHTQ*ISPCEE
Trigger: CTCTTCGCAGGGGCTGATGCACTGGGTGTGGAGCTG...CACCCCGATGCTCCTTAGTGATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp CTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCACTAAGGAGCATCGGGGTGGTCTGTGGGGAAGAATaGGGACCAGTGGACCCAAGG +
Preference number: 2 (lower is better)
Translates to: LGGRSWPRLRASLRSIGVVCGEE*GPVDPR
Trigger: CCTTGGGTCCACTGGTCCCCATTCTTCCCCACAGAC...CACCCCGATGCTCCTTAGTGATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR TCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCCTGGAGAGGGAAAGTaGCTGGCCTCAGTCAACCAG +
Preference number: 2 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYPGEGK*LASVNQ
Trigger: CTGGTTGACTGAGGCCAGTCACTTTCCCTCTCCAGG...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR GCA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCTGGTTAGGCCTCTCTaGTCAGCTCCACACCCAGTG +
Preference number: 2 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHLVRPL*SAPHPV
Trigger: CACTGGGTGTGGAGCTGAGCAGAGAGGCCTAACCAG...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR GCA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGCTCCCTTACCTCTTCTaGAAGCCTTGGGCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: TCARPVVAIESITPHACWLPYLF*KPWAVS
Trigger: GGAGACTGCCCAAGGCTTGCAGAAGAGGTAAGGGAG...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp CTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCACTAAGGAGCATCGGGGTGCCAAACCTGGGAGACTaGGATAGGAGTGCCTCACTC +
Preference number: 2 (lower is better)
Translates to: LGGRSWPRLRASLRSIGVPNLGD*DRSASL
Trigger: GAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGG...CACCCCGATGCTCCTTAGTGATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATATATACCAGGAGGCCTaGAGGCCTGGAGAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYIYQEA*RPGEGK
Trigger: CTTTCCCTCTCCAGGCCTCCAGGCCTCCTGGTATAT...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATTATCTTGCCCTGCCTTaGGGAGCCCTCAACCAAACC +
Preference number: 2 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHYLALP*GALNQT
Trigger: GGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATA...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 90 bp TATCACACCCCACGCCTGCTGGCTTCTGGTGACCGGCCTCTTTCCTaGCCTGGCCGGTTTCTGGAAGAGGCCAAGATGGGAGAAATTCTC +
Preference number: 2 (lower is better)
Translates to: YHTPRLLASGDRPLS*PGRFLEEAKMGEIL
Trigger: GAGAATTTCTCCCATCTTGGCCTCTTCCAGAAACCGGCCAGGCAAGGAAAGAGGCCGGTCACCAGAAGCCAGCAGGCGTGGGGTGTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATGAGAGGGAAAGTGACTaGCCTCAGTCAACCAGCAAC +
Preference number: 2 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHERESD*PQSTSN
Trigger: GTTGCTGGTTGACTGAGGCCAGTCACTTTCCCTCTC...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR TCA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTCTTGTGACACCAAGGTaGGCCCTCCTTCTGCTTTGT +
Preference number: 2 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPLVTPR*ALLLLC
Trigger: ACAAAGCAGAAGGAGGGCTCACCTTGGTGTCACAAG...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR TCA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGTTGTCGAGGGGAGGATaGGATAGAGTCCTTTCCAAA +
Preference number: 2 (lower is better)
Translates to: TCARPVVAIESITPHACWLSRGG*DRVLSK
Trigger: TTTGGAAAGGACTCTATCTCATCCTCCCCTCGACAA...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR TCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATAAAGAGGTCCCAAGCTaGTTCATTGGTGTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYKEVPS*FIGVLP
Trigger: GGGAAGGACACCAATGAATCAGCTTGGGACCTCTTT...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 90 bp CCTCACTCCCTTACCTCTTCTGCAAGCCTTGGGCAGTCTCCTGAATaGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCA +
Preference number: 2 (lower is better)
Translates to: PHSLTSSASLGQSPE*IMTLGDTEAAQKPS
Trigger: TGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAATTCAGGAGACTGCCCAAGGCTTGCAGAAGAGGTAAGGGAGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR TCA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTCCTTGGGCAGTCTCCTaGATTGATCATGACTTTGGG +
Preference number: 2 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPPWAVS*IDHDFG
Trigger: CCCAAAGTCATGATCAATTCAGGAGACTGCCCAAGG...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR GCA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTGGACCCAAGGATGGATaGGTTGGGGACACAAATACA +
Preference number: 2 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPGPKDG*VGDTNT
Trigger: TGTATTTGTGTCCCCAACGCATCCATCCTTGGGTCC...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR GCA 90 bp TTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGAAGAGCTCACCCTTGTaGCCTGAACATAACAGACAT +
Preference number: 2 (lower is better)
Translates to: LATGEIRDLRAPCSGYREKSSPL*PEHNRH
Trigger: ATGTCTGTTATGTTCAGGGCACAAGGGTGAGCTCTT...CTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR GCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATTGCTTTGTTGGTTGTTaGTGGACCTATGCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYCFVGC*WTYASS
Trigger: AGAAGAGGCATAGGTCCAGCAACAACCAACAAAGCA...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp AACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCAAGCCTCAGTGGACCCAAGGATaGATGCGTTGGGGACACAAA +
Preference number: 2 (lower is better)
Translates to: NLGDWDRSASLPYLFCKPQWTQG*MRWGHK
Trigger: TTTGTGTCCCCAACGCATCCATCCTTGGGTCCACTG...AGGCTTGCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 90 bp ACCTCTTCTGCAAGCCTTGGGCAGTCTCCTGAATTGATCATGACTTaGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTCAC +
Preference number: 2 (lower is better)
Translates to: TSSASLGQSPELIMT*GDTEAAQKPSNSVH
Trigger: GTGAACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAATTCAGGAGACTGCCCAAGGCTTGCAGAAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 90 bp AAATCCAAGACTTGTGACACCAAGGTGAGCCCTCCTTCTGCTTTGTaGGTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTG +
Preference number: 2 (lower is better)
Translates to: KSKTCDTKVSPPSAL*VVAGPMPLLPRTPL
Trigger: CAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAACCAACAAAGCAGAAGGAGGGCTCACCTTGGTGTCACAAGTCTTGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp GAATTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTCCCAATTCTCATTCTTaGCTTGTCGAGGGGAGGATG +
Preference number: 2 (lower is better)
Translates to: ELIMTLGDTEAAQKPSNSPNSHS*LVEGRM
Trigger: CATCCTCCCCTCGACAAGCCAAGAATGAGAATTGGG...AGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 90 bp TTGAAATCCAAGACTTGTGACACCAAGGTGAGCCCTCCTTCTGCTTaGTTGGTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCT +
Preference number: 2 (lower is better)
Translates to: LKSKTCDTKVSPPSA*LVVAGPMPLLPRTP
Trigger: AGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAACCAACAAAGCAGAAGGAGGGCTCACCTTGGTGTCACAAGTCTTGGATTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR TCA 90 bp CAACCAAACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCCATTCTCACCTCTCCTaGAACAAAATCATTAATGGG +
Preference number: 2 (lower is better)
Translates to: QPNLGDWDRSASLPYLFCHSHLS*NKIING
Trigger: CCCATTAATGATTTTGTTTCAGGAGAGGTGAGAATG...GCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp GCCAAGTTCACATGGCTAATAAATGGCAGACAGAGGAGGTGTCCAAGGATCGGATTTGTTGGTTGTTGCTaGACCTATGCCTCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: AKFTWLINGRQRRCPRIGFVGCC*TYASSP
Trigger: GGGAGAAGAGGCATAGGTCCAGCAACAACCAACAAA...TCCGATCCTTGGACACCTCCTCTGTCTGCCATTTATTAGCCATGTGAACTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 90 bp CCCAGAAACCCTCAAACTCTGTTCACTTATTCCCAATTCTCATTCTaGGCTTGTCGAGGGGAGGATGAGATAGAGTCCTTTCCAAAGATC +
Preference number: 2 (lower is better)
Translates to: PRNPQTLFTYSQFSF*ACRGEDEIESFPKI
Trigger: GATCTTTGGAAAGGACTCTATCTCATCCTCCCCTCGACAAGCCAAGAATGAGAATTGGGAATAAGTGAACAGAGTTTGAGGGTTTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR GCA 90 bp GTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTCATCTGATCACTCATTAATGGGCATATaGTTCCCTTCCTTTCATTTA +
Preference number: 2 (lower is better)
Translates to: VVAGPMPLLPRTPLSSDHSLMGI*FPSFHL
Trigger: TAAATGAAAGGAAGGGAAGCATATGCCCATTAATGA...GTGATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CCA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTACAAGGATGGATGCGTTaGGGACACAAATACAAGAAG +
Preference number: 2 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLQGWMR*GHKYKK
Trigger: CTTCTTGTATTTGTGTCCCCAACGCATCCATCCTTG...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CCA 72 bp TGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTaGAGACTGCAAGGCGGGGGACCCGCGCTCGGGAAC +
Preference number: 3 (lower is better)
Translates to: WEAGGLLPAPHG*RLQGGGPALGN
Trigger: GTTCCCGAGCGCGGGTCCCCCGCCTTGCAGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR GCA 72 bp CCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTaGAAGGCGGGGGACCCGCGCTCGGGAACTAGGGAT +
Preference number: 3 (lower is better)
Translates to: PEACSRPRTAGD*KAGDPRSGTRD
Trigger: ATCCCTAGTTCCCGAGCGCGGGTCCCCCGCCTTGCAGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR GCA 72 bp CAGGCCAGGGTCAGTGACAGGGCCGCTATCTTGCCCTaGCTTGGGGAGCCCTCAACCAAACCTGGGAGACTG +
Preference number: 3 (lower is better)
Translates to: QARVSDRAAILP*LGEPSTKPGRL
Trigger: CAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAGCGGCCCTGTCACTGACCCTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR GCA 72 bp CACCACAGGCCAGGGTCAGTGACAGGGCCGCTATCTTaGCCTGCCTTGGGGAGCCCTCAACCAAACCTGGGA +
Preference number: 3 (lower is better)
Translates to: HHRPGSVTGPLS*PALGSPQPNLG
Trigger: TCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAGCGGCCCTGTCACTGACCCTGGCCTGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR GCA 72 bp CACGCCTGCTGGCTTCTGGTGACCGGCCTCTTTCCTTaGCTGGCCGGTTTCTGGAAGAGGCCAAGATGGGAG +
Preference number: 3 (lower is better)
Translates to: HACWLLVTGLFP*LAGFWKRPRWE
Trigger: CTCCCATCTTGGCCTCTTCCAGAAACCGGCCAGGCAAGGAAAGAGGCCGGTCACCAGAAGCCAGCAGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR TCA 72 bp ACTTCGGTGTCTGAGTCCCAAGCCGGCTGGGGTGGATaGGTACAAAGATGGGCCCGGCGGGCTCTAGAAGTC +
Preference number: 3 (lower is better)
Translates to: TSVSESQAGWGG*VQRWARRALEV
Trigger: GACTTCTAGAGCCCGCCGGGCCCATCTTTGTACTCATCCACCCCAGCCGGCTTGGGACTCAGACACCGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CCA 72 bp CCTGCCTTGGGGAGCCCTCAACCAAACCTGGGAGACTaGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGC +
Preference number: 3 (lower is better)
Translates to: PALGSPQPNLGD*DRSASLPYLFC
Trigger: GCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CCA 72 bp TTTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTaGCCACGCCTCAGAGCATCACTAAGGAGCATCGGG +
Preference number: 3 (lower is better)
Translates to: FSGGRYHLGGRS*PRLRASLRSIG
Trigger: CCCGATGCTCCTTAGTGATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CAA 90 bp GCAAGGCGGGGGACCCGCGCTCGGGAACTAGGGATAGGATTGAGTGGCAGAGCCGTGGCAGAGTTGGGATaGAAATCCAAGACTTGTGAC +
Preference number: 3 (lower is better)
Translates to: ARRGTRARELGIGLSGRAVAELG*KSKTCD
Trigger: GTCACAAGTCTTGGATTTCAATCCCAACTCTGCCAC...GGCTCTGCCACTCAATCCTATCCCTAGTTCCCGAGCGCGGGTCCCCCGCCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR GCA 72 bp CCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTaGTGGCTTCTGGTGACCGGCCTCTTTCCTTGCCTG +
Preference number: 3 (lower is better)
Translates to: PVVAIESITPHA*WLLVTGLFPCL
Trigger: CAGGCAAGGAAAGAGGCCGGTCACCAGAAGCCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CCA 72 bp TATCTTGCCCTGCCTTGGGGAGCCCTCAACCAAACCTaGGAGACTGGGATAGGAGTGCCTCACTCCCTTACC +
Preference number: 3 (lower is better)
Translates to: YLALPWGALNQT*ETGIGVPHSLT
Trigger: GGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CAA 90 bp CCGCTATCTTGCCCTGCCTTGGGGAGCCCTCAACCAAACCTGGGAGACTGGGATCCTCCTTCTGCTTTGTaGGTTGTTGCTGGACCTATG +
Preference number: 3 (lower is better)
Translates to: PLSCPALGSPQPNLGDWDPPSAL*VVAGPM
Trigger: CATAGGTCCAGCAACAACCAACAAAGCAGAAGGAGG...ATCCCAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CAA 90 bp CCGCTATCTTGCCCTGCCTTGGGGAGCCCTCAACCAAACCTGGGAGACTGGGATGGGCAGTCTCCTGAATaGATCATGACTTTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: PLSCPALGSPQPNLGDWDGQSPE*IMTLGD
Trigger: GTCACCCAAAGTCATGATCAATTCAGGAGACTGCCC...ATCCCAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CAA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGAACTCAGTGGCAGAGTaGGGATTGAAATCCAAGACT +
Preference number: 3 (lower is better)
Translates to: TCARPVVAIESITPHACWNSVAE*GLKSKT
Trigger: AGTCTTGGATTTCAATCCCAACTCTGCCACTGAGTT...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CAA 90 bp AACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCAAGCCTGCGAAGAGCTCACCCTaGTGCCCTGAACATAACAGA +
Preference number: 3 (lower is better)
Translates to: NLGDWDRSASLPYLFCKPAKSSP*CPEHNR
Trigger: TCTGTTATGTTCAGGGCACAAGGGTGAGCTCTTCGC...AGGCTTGCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR GCA 72 bp CACCAAGGTGAGCCCTCCTTCTGCTTTGTTGGTTGTTaGTGGACCTATGCCTCTTCTCCCAAGAACCCCTCT +
Preference number: 3 (lower is better)
Translates to: HQGEPSFCFVGC*WTYASSPKNPS
Trigger: AGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAACCAACAAAGCAGAAGGAGGGCTCACCTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CCA 72 bp CAAGGTGAGCCCTCCTTCTGCTTTGTTGGTTGTTGCTaGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTC +
Preference number: 3 (lower is better)
Translates to: QGEPSFCFVGCC*TYASSPKNPSV
Trigger: GACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAACCAACAAAGCAGAAGGAGGGCTCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CCA 72 bp CTGGTGACCGGCCTCTTTCCTTGCCTGGCCGGTTTCTaGAAGAGGCCAAGATGGGAGAAATTCTCAGGATTT +
Preference number: 3 (lower is better)
Translates to: LVTGLFPCLAGF*KRPRWEKFSGF
Trigger: AAATCCTGAGAATTTCTCCCATCTTGGCCTCTTCCAGAAACCGGCCAGGCAAGGAAAGAGGCCGGTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CAA 90 bp AACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCAAGCCTCTGCTTTGTTGGTTGTaGCTGGACCTATGCCTCTTC +
Preference number: 3 (lower is better)
Translates to: NLGDWDRSASLPYLFCKPLLCWL*LDLCLF
Trigger: GAAGAGGCATAGGTCCAGCAACAACCAACAAAGCAG...AGGCTTGCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR GCA 72 bp GCCCTCCTTCTGCTTTGTTGGTTGTTGCTGGACCTATaGCTCTTCTCCCAAGAACCCCTCTGTCATCTGATC +
Preference number: 3 (lower is better)
Translates to: ALLLLCWLLLDL*LFSQEPLCHLI
Trigger: GATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAACCAACAAAGCAGAAGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CAA 90 bp GCCAAGTTCACATGGCTAATAAATGGCAGACAGAGGAGGTGTCCAAGGATCGGAGAATTGATCATGACTTaGGGTGACACGGAGGCCGCC +
Preference number: 3 (lower is better)
Translates to: AKFTWLINGRQRRCPRIGELIMT*GDTEAA
Trigger: GGCGGCCTCCGTGTCACCCAAAGTCATGATCAATTC...TCCGATCCTTGGACACCTCCTCTGTCTGCCATTTATTAGCCATGTGAACTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CAA 90 bp GCCAAGTTCACATGGCTAATAAATGGCAGACAGAGGAGGTGTCCAAGGATCGGAAGCCCTCCTTCTGCTTaGTTGGTTGTTGCTGGACCT +
Preference number: 3 (lower is better)
Translates to: AKFTWLINGRQRRCPRIGSPPSA*LVVAGP
Trigger: AGGTCCAGCAACAACCAACAAAGCAGAAGGAGGGCT...TCCGATCCTTGGACACCTCCTCTGTCTGCCATTTATTAGCCATGTGAACTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CAA 90 bp GCCAAGTTCACATGGCTAATAAATGGCAGACAGAGGAGGTGTCCAAGGATCGGACTTCTGCTTTGTTGGTaGTTGCTGGACCTATGCCTC +
Preference number: 3 (lower is better)
Translates to: AKFTWLINGRQRRCPRIGLLLCW*LLDLCL
Trigger: GAGGCATAGGTCCAGCAACAACCAACAAAGCAGAAG...TCCGATCCTTGGACACCTCCTCTGTCTGCCATTTATTAGCCATGTGAACTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR-3UTR CAA 90 bp AAATCCTCACAACAACCCTGCGAGGTAGGTGTTTATAAACCCCCATTTGACAGACCAAGGATGGATGCGTaGGGGACACAAATACAAGAA +
Preference number: 3 (lower is better)
Translates to: KSSQQPCEVGVYKPPFDRPRMDA*GTQIQE
Trigger: TTCTTGTATTTGTGTCCCCAACGCATCCATCCTTGG...TCTGTCAAATGGGGGTTTATAAACACCTACCTCGCAGGGTTGTTGTGAGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR TCA 72 bp TTCCCAATTCTCATTCTTGGCTTGTCGAGGGGAGGATaGGATAGAGTCCTTTCCAAAGATCTCAAAATGTCA +
Preference number: 3 (lower is better)
Translates to: FPILILGLSRGG*DRVLSKDLKMS
Trigger: TGACATTTTGAGATCTTTGGAAAGGACTCTATCTCATCCTCCCCTCGACAAGCCAAGAATGAGAATTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CCA 72 bp CTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATaGACCTTAGAATACCATCATTTTATATACCAGGAG +
Preference number: 3 (lower is better)
Translates to: LSKDLKMSETEG*TLEYHHFIYQE
Trigger: CTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GCCTGCTCCCGGCCCCGCACGGCTGGAGACTGCAAGGCGGGGGACCCGCGCTCGGACCCTGGGTCGCTCTaGGGCTGCGCGGATGGACGG +
Preference number: 4 (lower is better)
Translates to: ACSRPRTAGDCKAGDPRSDPGSL*GCADGR
Trigger: CCGTCCATCCGCGCAGCCGCAGAGCGACCCAGGGTC...CGAGCGCGGGTCCCCCGCCTTGCAGTCTCCAGCCGTGCGGGGCCGGGAGCAGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp TCTAGAAGTCTGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTGGGAGATCCGCGACCTaGGCGCGCCCTGTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SRSLGGRRPAPGPARLETGRSAT*ARPVVA
Trigger: AGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCC...AGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCAGACTTCTAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp TCTAGAAGTCTGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTAGCCGCTATGGACGCTaGGCTCCTCAGCTTCGTCCG +
Preference number: 4 (lower is better)
Translates to: SRSLGGRRPAPGPARLETSRYGR*APQLRP
Trigger: CGGACGAAGCTGAGGAGCTCAGCGTCCATAGCGGCT...AGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCAGACTTCTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp TCTAGAAGTCTGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTACAGGCCAGGGTCAGTaGCAGGGCCGCTATCTTGCC +
Preference number: 4 (lower is better)
Translates to: SRSLGGRRPAPGPARLETTGQGQ*QGRYLA
Trigger: GGCAAGATAGCGGCCCTGTCACTGACCCTGGCCTGT...AGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCAGACTTCTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp TCTAGAAGTCTGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTCCAGAGGGCAAAAGCTaGACCTGCTGGGTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SRSLGGRRPAPGPARLETPEGKS*TCWVRG
Trigger: CCCCCGAACCCAGCAGGTGCAGCTTTTGCCCTCTGG...AGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCAGACTTCTAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGGCCCCGCCCGCCAGTTaGTCGCCTCCTGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: TCARPVVAIESITPHACWAPPAS*SPPAAP
Trigger: GGGTGCTGCAGGAGGCGACCAACTGGCGGGCGGGGC...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp CTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCACTAAGGAGCATCGGGGTGCCGGCCCCGCACGGCTaGAGACTGCAAGGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LGGRSWPRLRASLRSIGVPAPHG*RLQGGG
Trigger: TCCCCCGCCTTGCAGTCTCCAGCCGTGCGGGGCCGG...CACCCCGATGCTCCTTAGTGATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GCAAGGCGGGGGACCCGCGCTCGGGAACTAGGGATAGGATTGAGTGGCAGAGCCTCTCCACGACCCCCTTaGCGGGCTCTGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ARRGTRARELGIGLSGRASPRPP*RALALL
Trigger: GAGCAAGGCCAGAGCCCGGCAAGGGGGTCGTGGAGA...GGCTCTGCCACTCAATCCTATCCCTAGTTCCCGAGCGCGGGTCCCCCGCCTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp TTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGCGCACGGCTGGAGACTaGAAGGCGGGGGACCCGCGC +
Preference number: 4 (lower is better)
Translates to: LATGEIRDLRAPCSGYRERTAGD*KAGDPR
Trigger: GCGCGGGTCCCCCGCCTTGCAGTCTCCAGCCGTGCG...CTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp CCGCTATCTTGCCCTGCCTTGGGGAGCCCTCAACCAAACCTGGGAGACTGGGATCCGACCCCTCGGCTCTaGCCTGGGCTCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PLSCPALGSPQPNLGDWDPTPRL*PGLPKL
Trigger: CAGCTTCGGGAGCCCAGGGCAGAGCCGAGGGGTCGG...ATCCCAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TCTAGAAGTCTGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTTCAGAGGAGCCGCTATaGACGCTGAGCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SRSLGGRRPAPGPARLETSEEPL*TLSSSA
Trigger: AGCTGAGGAGCTCAGCGTCCATAGCGGCTCCTCTGA...AGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCAGACTTCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TCTAGAAGTCTGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTGCCTCTTTCCTTGCCTaGCCGGTTTCTGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SRSLGGRRPAPGPARLETASFLA*PVSGRG
Trigger: GCCTCTTCCAGAAACCGGCCAGGCAAGGAAAGAGGC...AGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCAGACTTCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TCTAGAAGTCTGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTCCAAGCCGGCTGGGGTaGATGAGTACAAAGATGGGC +
Preference number: 4 (lower is better)
Translates to: SRSLGGRRPAPGPARLETPSRLG*MSTKMG
Trigger: GCCCATCTTTGTACTCATCCACCCCAGCCGGCTTGG...AGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCAGACTTCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGGCCGGCTGGGGTGGATaGGTACAAAGATGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: TCARPVVAIESITPHACWAGWGG*VQRWAR
Trigger: CCGGGCCCATCTTTGTACTCATCCACCCCAGCCGGC...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGGGCCCTACCCTACCCTaGCCTCCTATGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: TCARPVVAIESITPHACWGPTLP*PPMAAT
Trigger: GGTGGCAGCCATAGGAGGGCAGGGTAGGGTAGGGCC...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp CTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCACTAAGGAGCATCGGGGTGCGGGAGCCCAGGGTCTaGGGAGTGTCTGGCTATGGC +
Preference number: 4 (lower is better)
Translates to: LGGRSWPRLRASLRSIGVREPRV*GVSGYG
Trigger: GCCATAGCCAGACACTCCCCAGACCCTGGGCTCCCG...CACCCCGATGCTCCTTAGTGATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGCGGGCTTCGATTGGCTaGGGGAATCCCCCACCACGC +
Preference number: 4 (lower is better)
Translates to: TCARPVVAIESITPHACWRASIG*GNPPPR
Trigger: GCGTGGTGGGGGATTCCCCCAGCCAATCGAAGCCCG...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGGGCTACCTGGCTGCGTaGGGGCGTCCCGCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: TCARPVVAIESITPHACWGYLAA*GRPAGL
Trigger: TAAACCTGCGGGACGCCCCCACGCAGCCAGGTAGCC...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GCCTGCTCCCGGCCCCGCACGGCTGGAGACTGCAAGGCGGGGGACCCGCGCTCGCATTCTCACCTCTCCTaGAACAAAATCATTAATGGG +
Preference number: 4 (lower is better)
Translates to: ACSRPRTAGDCKAGDPRSHSHLS*NKIING
Trigger: CCCATTAATGATTTTGTTTCAGGAGAGGTGAGAATG...CGAGCGCGGGTCCCCCGCCTTGCAGTCTCCAGCCGTGCGGGGCCGGGAGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GCAAGGCGGGGGACCCGCGCTCGGGAACTAGGGATAGGATTGAGTGGCAGAGCCCCTGGAGAGGGAAAGTaGCTGGCCTCAGTCAACCAG +
Preference number: 4 (lower is better)
Translates to: ARRGTRARELGIGLSGRAPGEGK*LASVNQ
Trigger: CTGGTTGACTGAGGCCAGTCACTTTCCCTCTCCAGG...GGCTCTGCCACTCAATCCTATCCCTAGTTCCCGAGCGCGGGTCCCCCGCCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCAGTTGGTCGCCTCCTaGAGCACCCTGGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHQLVAS*STLEAQ
Trigger: CTGGGCCTCCAGGGTGCTGCAGGAGGCGACCAACTG...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp CTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCACTAAGGAGCATCGGGGTGACAGGGCCGCTATCTTaGCCTGCCTTGGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LGGRSWPRLRASLRSIGVTGPLS*PALGSP
Trigger: AGGGCTCCCCAAGGCAGGGCAAGATAGCGGCCCTGT...CACCCCGATGCTCCTTAGTGATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GCAAGGCGGGGGACCCGCGCTCGGGAACTAGGGATAGGATTGAGTGGCAGAGCCACCGGCCTCTTTCCTTaGCTGGCCGGTTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ARRGTRARELGIGLSGRATGLFP*LAGFWK
Trigger: CTTCCAGAAACCGGCCAGGCAAGGAAAGAGGCCGGT...GGCTCTGCCACTCAATCCTATCCCTAGTTCCCGAGCGCGGGTCCCCCGCCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCCACACGTGCGGTTCTaGAACCCGCGAGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYPHVRF*NPRAQW
Trigger: CCACTGGGCTCGCGGGTTCCAGAACCGCACGTGTGG...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp CCGCTATCTTGCCCTGCCTTGGGGAGCCCTCAACCAAACCTGGGAGACTGGGATTTCGCTCGGTCTCCTTaGCCTCCCGCTCCTGCGACG +
Preference number: 4 (lower is better)
Translates to: PLSCPALGSPQPNLGDWDFARSP*PPAPAT
Trigger: CGTCGCAGGAGCGGGAGGCCAAGGAGACCGAGCGAA...ATCCCAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GGATTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGACTTCCCTCGAGCCCTTaGGGTGGTGCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GLATGEIRDLRAPCSGYRLPSSP*GGAWIW
Trigger: CCAGATCCAGGCACCACCTCAAGGGCTCGAGGGAAG...TCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATGGGCCCCACCAGCCTTaGGCCTTTTTCGCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHGPHQP*AFFARS
Trigger: AGACCGAGCGAAAAAGGCGCAAGGCTGGTGGGGCCC...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTCAGGGTCTCCGGTCCTaGCCCCTCTCCAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPQGLRS*PLSKTQ
Trigger: CTGGGTCTTGGAGAGGGGGCAGGACCGGAGACCCTG...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGGAAGAATGGGGACCAGTGGACCCAAGGATGGATGCGTTGGGGACACAAATACTGCGCTCCTCCAGTGTaGAGTCCCCCGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GKNGDQWTQGWMRWGHKYCAPPV*SPPASR
Trigger: GCGGGAGGCCGGGGGACTCCACACTGGAGGAGCGCA...GTATTTGTGTCCCCAACGCATCCATCCTTGGGTCCACTGGTCCCCATTCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 72 bp CCAGGGTCAGTGACAGGGCCGCTATCTTGCCCTGCCTaGGGGAGCCCTCAACCAAACCTGGGAGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: PGSVTGPLSCPA*GSPQPNLGDWD
Trigger: ATCCCAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAGCGGCCCTGTCACTGACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 72 bp CCACGCCTGCTGGCTTCTGGTGACCGGCCTCTTTCCTaGCCTGGCCGGTTTCTGGAAGAGGCCAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: PRLLASGDRPLS*PGRFLEEAKMG
Trigger: TCCCATCTTGGCCTCTTCCAGAAACCGGCCAGGCAAGGAAAGAGGCCGGTCACCAGAAGCCAGCAGGCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 72 bp AGGCGGGGGACCCGCGCTCGGGAACTAGGGATAGGATaGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: RRGTRARELGIG*SGRAGISNWGD
Trigger: ATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCCTAGTTCCCGAGCGCGGGTCCCCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp CCGCTATCTTGCCCTGCCTTGGGGAGCCCTCAACCAAACCTGGGAGACTGGGATCGCACGTGGCGTCAATaGCAAAGACGCCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PLSCPALGSPQPNLGDWDRTWRQ*QRRLPH
Trigger: GTGGGGAAGGCGTCTTTGTCATTGACGCCACGTGCG...ATCCCAGTCTCCCAGGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp TCTAGAAGTCTGGGAGGCCGGAGGCCTGCTCCCGGCCCCGCACGGCTGGAGACTTTGTCGAGGGGAGGATaGGATAGAGTCCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SRSLGGRRPAPGPARLETLSRGG*DRVLSK
Trigger: TTTGGAAAGGACTCTATCTCATCCTCCCCTCGACAA...AGTCTCCAGCCGTGCGGGGCCGGGAGCAGGCCTCCGGCCTCCCAGACTTCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GGATTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAAAAGACTTCGGTGTCTaGGTCCCAAGCCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLATGEIRDLRAPCSGYRKDFGV*VPSRLG
Trigger: CCCCAGCCGGCTTGGGACTCAGACACCGAAGTCTTT...TCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCCAGCCTCTTCTTTGTaGGCCCTCCGTCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYPASSL*ALRLSW
Trigger: CCAGGACAGACGGAGGGCGCACAAAGAAGAGGCTGG...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GCAAGGCGGGGGACCCGCGCTCGGGAACTAGGGATAGGATTGAGTGGCAGAGCCGAAGGGGCCTCTCACTaGCTCTTCCTATTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ARRGTRARELGIGLSGRAEGASH*LFLFPC
Trigger: ACAGGGAAATAGGAAGAGGCAGTGAGAGGCCCCTTC...GGCTCTGCCACTCAATCCTATCCCTAGTTCCCGAGCGCGGGTCCCCCGCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp CGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGCTTCTGGTGCCAGACTCCTCATCCTaGAGCTCCCGGGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RPVVAIESITPHACWLLVPDSSS*SSRGLS
Trigger: TGACAGCCCCCGGGAGCTCCAGGATGAGGAGTCTGG...CACCAGAAGCCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTGCCCAGTGGCTGGCCTaGAAGTCCATGGGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPAQWLA*KSMGCR
Trigger: TCGACAGCCCATGGACTTCCAGGCCAGCCACTGGGC...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTCATCTGATCACGGGAGCCCTGCCAGCTaGGCCACCCGAGGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: VVAGPMPLLPRTPLSSDHGSPAS*ATRGAL
Trigger: CAACGCCCCTCGGGTGGCCCAGCTGGCAGGGCTCCC...GTGATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp CAACCAAACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCGCCCTCCGTCTGTCCTaGCTGGAGTCGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QPNLGDWDRSASLPYLFCALRLS*LESQLG
Trigger: CCCCAGCTGCGACTCCAGCCAGGACAGACGGAGGGC...GCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp CAACCAAACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCCGGCCCCCGCCGGGCTaGTGTAAAAGGCGACTGCTC +
Preference number: 4 (lower is better)
Translates to: QPNLGDWDRSASLPYLFCRPPPG*CKRRLL
Trigger: GAGCAGTCGCCTTTTACACCAGCCCGGCGGGGGCCG...GCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GGATTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGATCATGACTTTGGGTaGCACGGAGGCCGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GLATGEIRDLRAPCSGYRDHDFG*HGGRPE
Trigger: TTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATC...TCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp TTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTTCTGGGCTACCTGGCTaGGTGGGGGCGTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LIMTLGDTEAAQKPSNSVSGLPG*VGASRR
Trigger: CCTGCGGGACGCCCCCACGCAGCCAGGTAGCCCAGA...AACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GCCAAGTTCACATGGCTAATAAATGGCAGACAGAGGAGGTGTCCAAGGATCGGAGTCCCAGCGGCGTCGTaGGGCGGTCCCGGCAGAACC +
Preference number: 4 (lower is better)
Translates to: AKFTWLINGRQRRCPRIGVPAAS*GGPGRT
Trigger: GGTTCTGCCGGGACCGCCCCACGACGCCGCTGGGAC...TCCGATCCTTGGACACCTCCTCTGTCTGCCATTTATTAGCCATGTGAACTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp CGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGCTTCTGGTGGCCTTCGTAAGAAGGTaGAGCCACGTAGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RPVVAIESITPHACWLLVAFVRR*SHVGWR
Trigger: CCGCCACCCTACGTGGCTCCACCTTCTTACGAAGGC...CACCAGAAGCCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTCTGGGGCTGATGAAGTaGGCACCTGAGAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPLGLMK*APESSR
Trigger: CCGGGAACTCTCAGGTGCCCACTTCATCAGCCCCAG...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTCATCTGATCACCTGCGGGGCAAGGTGTaGGCACGGCGGGTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: VVAGPMPLLPRTPLSSDHLRGKV*ARRVAF
Trigger: GAAGGCGACCCGCCGTGCCCACACCTTGCCCCGCAG...GTGATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATGTCTGTGGGGAAGAATaGGGACCAGTGGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYVCGEE*GPVDPR
Trigger: CCTTGGGTCCACTGGTCCCCATTCTTCCCCACAGAC...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATTGCCTGGCCGGTTTCTaGAAGAGGCCAAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHCLAGF*KRPRWE
Trigger: CTCCCATCTTGGCCTCTTCCAGAAACCGGCCAGGCA...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GGGAAGAATGGGGACCAGTGGACCCAAGGATGGATGCGTTGGGGACACAAATACGATGAAGTGGGCACCTaGGAGTTCCCGGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GKNGDQWTQGWMRWGHKYDEVGT*EFPGPL
Trigger: GAGAGGCCCCGGGAACTCTCAGGTGCCCACTTCATC...GTATTTGTGTCCCCAACGCATCCATCCTTGGGTCCACTGGTCCCCATTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCTCGACAGCCGCTTTTaGCAAGGGGAAGGAAAGACC +
Preference number: 4 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHLDSRF*QGEGKT
Trigger: GGTCTTTCCTTCCCCTTGTCAAAAGCGGCTGTCGAG...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp CAACCAAACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCCCCTGCCCTCCTGCCTaGTCCTGGTTAGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QPNLGDWDRSASLPYLFCPCPPA*SWLGLS
Trigger: AGAGAGGCCTAACCAGGATCAGGCAGGAGGGCAGGG...GCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATGCTTTCCTTTTCTCTTaGTCCCGAGCTCGGACCTCG +
Preference number: 4 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHAFLFS*SRARTS
Trigger: CGAGGTCCGAGCTCGGGAGCAAGAGAAAAGGAAAGC...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GGATTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGACCAAGATGCGGAAAGTaGGCTCCTCCAGTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GLATGEIRDLRAPCSGYRPRCGK*APPVWS
Trigger: ACTCCACACTGGAGGAGCGCACTTTCCGCATCTTGG...TCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GGGAAGAATGGGGACCAGTGGACCCAAGGATGGATGCGTTGGGGACACAAATACGCCGCTATCTTGCCCTaGCTTGGGGAGCCCTCAACC +
Preference number: 4 (lower is better)
Translates to: GKNGDQWTQGWMRWGHKYAAILP*LGEPST
Trigger: GGTTGAGGGCTCCCCAAGGCAGGGCAAGATAGCGGC...GTATTTGTGTCCCCAACGCATCCATCCTTGGGTCCACTGGTCCCCATTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGGAAGAATGGGGACCAGTGGACCCAAGGATGGATGCGTTGGGGACACAAATACCCCCTCGGAGAACAGTaGGCCATCCAGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: GKNGDQWTQGWMRWGHKYPLGEQ*AIQHPA
Trigger: GGCAGGATGCTGGATGGCCCACTGTTCTCCGAGGGG...GTATTTGTGTCCCCAACGCATCCATCCTTGGGTCCACTGGTCCCCATTCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTCACTTATTCCCAACGCGAGCCCAGTGGCTaGCCTGGAAGTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: WVTRRPPRNPQTLFTYSQREPSG*PGSPWA
Trigger: AGCCCATGGACTTCCAGGCCAGCCACTGGGCTCGCG...TTGGGAATAAGTGAACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp CAACCAAACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCAACCCGCGAGCCCAGTaGCTGGCCTGGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: QPNLGDWDRSASLPYLFCNPRAQ*LAWKSM
Trigger: CATGGACTTCCAGGCCAGCCACTGGGCTCGCGGGTT...GCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGATTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGACCTGTAGCTTTGGCTTaGGGATGGCTGTCGCTACCA +
Preference number: 4 (lower is better)
Translates to: GLATGEIRDLRAPCSGYRPVALA*GWLSLP
Trigger: TGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGG...TCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTGGTGGTGCCTGGATCTaGGAGCGGGATGCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LIMTLGDTEAAQKPSNSVGGAWI*ERDAGH
Trigger: GTGCCCCGCATCCCGCTCCCAGATCCAGGCACCACC...AACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTGGGAGTGTCTGGCTATaGCGGGGCGGCTGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPGSVWL*RGGCFL
Trigger: TAAAAAGCAGCCGCCCCGCCATAGCCAGACACTCCC...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTGGTCTGGGGAGTGTCTaGCTATGGCGGGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LIMTLGDTEAAQKPSNSVGLGSV*LWRGGC
Trigger: GCAGCCGCCCCGCCATAGCCAGACACTCCCCAGACC...AACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTCCACGGGACAGGCCCTaGGAACTGCGGGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LIMTLGDTEAAQKPSNSVPRDRP*ELRGKV
Trigger: CACCTTGCCCCGCAGTTCCCAGGGCCTGTCCCGTGG...AACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp CTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCACTAAGGAGCATCGGGGTGCAGTGGACCCAAGGATaGATGCGTTGGGGACACAAA +
Preference number: 4 (lower is better)
Translates to: LGGRSWPRLRASLRSIGVQWTQG*MRWGHK
Trigger: TTTGTGTCCCCAACGCATCCATCCTTGGGTCCACTG...CACCCCGATGCTCCTTAGTGATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGATTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGACCAAACCTGGGAGACTaGGATAGGAGTGCCTCACTC +
Preference number: 4 (lower is better)
Translates to: GLATGEIRDLRAPCSGYRPNLGD*DRSASL
Trigger: GAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGG...TCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTCACTTATTCCCAAACACCCCACGCCTGCTaGCTTCTGGTGACCGGCCTC +
Preference number: 4 (lower is better)
Translates to: WVTRRPPRNPQTLFTYSQTPHAC*LLVTGL
Trigger: GAGGCCGGTCACCAGAAGCCAGCAGGCGTGGGGTGT...TTGGGAATAAGTGAACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GGATTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGACCTCGGTTTGGCTTATaGCATCTAGGATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GLATGEIRDLRAPCSGYRPRFGL*HLGSPR
Trigger: TCGGGGAGATCCTAGATGTCATAAGCCAAACCGAGG...TCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp ACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGGGGTCGCTCTGCGGCTaGGCGGATGGACGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: TEGWTLEYHHFIYQEAWRGSLCG*ADGRGA
Trigger: AGCGCCCCGTCCATCCGCGCAGCCGCAGAGCGACCC...CCTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTCTCCCTTACCTCTTCTaGAAGCCTTGGGCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPLPYLF*KPWAVS
Trigger: GGAGACTGCCCAAGGCTTGCAGAAGAGGTAAGGGAG...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GCAAGGCGGGGGACCCGCGCTCGGGAACTAGGGATAGGATTGAGTGGCAGAGCCCAAGGATGGATGCGTTaGGGACACAAATACAAGAAG +
Preference number: 4 (lower is better)
Translates to: ARRGTRARELGIGLSGRAQGWMR*GHKYKK
Trigger: CTTCTTGTATTTGTGTCCCCAACGCATCCATCCTTG...GGCTCTGCCACTCAATCCTATCCCTAGTTCCCGAGCGCGGGTCCCCCGCCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGGAAGAATGGGGACCAGTGGACCCAAGGATGGATGCGTTGGGGACACAAATACCTGGGAGGGAGATCGTaGCCACGCCTCAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: GKNGDQWTQGWMRWGHKYLGGRS*PRLRAS
Trigger: TGATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAG...GTATTTGTGTCCCCAACGCATCCATCCTTGGGTCCACTGGTCCCCATTCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCCTTGGGCAGTCTCCTaGATTGATCATGACTTTGGG +
Preference number: 4 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHPWAVS*IDHDFG
Trigger: CCCAAAGTCATGATCAATTCAGGAGACTGCCCAAGG...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGGCGCGGCCCACACGTaGGGTTCTGGAACCCGCGAG +
Preference number: 4 (lower is better)
Translates to: DGRMDLRIPSFYIPGGLEGAAHT*GSGTRE
Trigger: CTCGCGGGTTCCAGAACCGCACGTGTGGGCCGCGCC...CTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp CAACCAAACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCAGCTATCTCGGTGCCTaGGCTCCCTGTAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QPNLGDWDRSASLPYLFCSYLGA*APCSFG
Trigger: GCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGCT...GCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTCATCTGATCACGGGCCTAAGGCTTGGTaGTCTGGGCTACCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VVAGPMPLLPRTPLSSDHGPKAW*SGLPGC
Trigger: GCAGCCAGGTAGCCCAGAGCACCAAGCCTTAGGCCC...GTGATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GGATTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGATTGTTGCTGGACCTATaGCTCTTCTCCCAAGAACCC +
Preference number: 4 (lower is better)
Translates to: GLATGEIRDLRAPCSGYRLLLDL*LFSQEP
Trigger: GGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAA...TCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GAATTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTTTGCCGGGCTTCGATTaGCTGGGGGAATCCCCCACC +
Preference number: 4 (lower is better)
Translates to: ELIMTLGDTEAAQKPSNSLPGFD*LGESPT
Trigger: GGTGGGGGATTCCCCCAGCCAATCGAAGCCCGGCAA...AGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGTGCTCTGGGCTACCTaGCTGCGTGGGGGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: DGRMDLRIPSFYIPGGLEVLWAT*LRGGVP
Trigger: CGGGACGCCCCCACGCAGCCAGGTAGCCCAGAGCAC...CTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGCCCTCGGCTCTGCCCTaGGCTCCCGAAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: DGRMDLRIPSFYIPGGLEPSALP*APEAAG
Trigger: CCCAGCAGCTTCGGGAGCCCAGGGCAGAGCCGAGGG...CTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCTTCCCATCTTCCTCTaGCGAACTGTTTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYLPIFL*RTVSNL
Trigger: GAGGTTGGAAACAGTTCGCCAGAGGAAGATGGGAAG...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTGAGAGGGAAAGTGACTaGCCTCAGTCAACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPERESD*PQSTSN
Trigger: GTTGCTGGTTGACTGAGGCCAGTCACTTTCCCTCTC...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGCCCAATTCTCATTCTTaGCTTGTCGAGGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LATGEIRDLRAPCSGYREPNSHS*LVEGRM
Trigger: CATCCTCCCCTCGACAAGCCAAGAATGAGAATTGGG...CTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTCATCTGATCACCCTGTTGGGTCCCTCTaGTGTCCCTCACCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: VVAGPMPLLPRTPLSSDHPVGSL*CPSPRR
Trigger: TCTTCGGGGTGAGGGACATCAGAGGGACCCAACAGG...GTGATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp AAATCCTCACAACAACCCTGCGAGGTAGGTGTTTATAAACCCCCATTTGACAGAGCCGGGCTCTGGCCTTaGTCTGGCCGCTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: KSSQQPCEVGVYKPPFDRAGLWP*SGRSTA
Trigger: GGCTGTGGAGCGGCCAGAGCAAGGCCAGAGCCCGGC...TCTGTCAAATGGGGGTTTATAAACACCTACCTCGCAGGGTTGTTGTGAGGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp CGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGCTTCTGGTGGGACCCAAGGATGGATaGGTTGGGGACACAAATACA +
Preference number: 4 (lower is better)
Translates to: RPVVAIESITPHACWLLVGPKDG*VGDTNT
Trigger: TGTATTTGTGTCCCCAACGCATCCATCCTTGGGTCC...CACCAGAAGCCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GAATTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTCAGCTCCACACCCAGTaGATCAGCCCCTGCGAAGAG +
Preference number: 4 (lower is better)
Translates to: ELIMTLGDTEAAQKPSNSQLHTQ*ISPCEE
Trigger: CTCTTCGCAGGGGCTGATGCACTGGGTGTGGAGCTG...AGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp CGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGCTTCTGGTGGTGTGCCAGGCAGTGTaGAAGGCGCTTTACATACAT +
Preference number: 4 (lower is better)
Translates to: RPVVAIESITPHACWLLVVCQAV*KALYIH
Trigger: ATGTATGTAAAGCGCCTTGCACACTGCCTGGCACAC...CACCAGAAGCCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTCTATCACCAATAGCTTaGACTTCTGCACCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPLSPIA*TSAPRG
Trigger: GCCTCTGGGTGCAGAAGTCCAAGCTATTGGTGATAG...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GCCAAGTTCACATGGCTAATAAATGGCAGACAGAGGAGGTGTCCAAGGATCGGATGGCCTGGAAGTCCATaGGCTGTCGAGAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: AKFTWLINGRQRRCPRIGWPGSP*AVEKGR
Trigger: GCGCCCCTTCTCGACAGCCCATGGACTTCCAGGCCA...TCCGATCCTTGGACACCTCCTCTGTCTGCCATTTATTAGCCATGTGAACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTATGGAGCCACGTAGGGTaGCGGCCGGTCCCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLWSHVG*RPVPAA
Trigger: CGCCGCTGGGACCGGCCGCCACCCTACGTGGCTCCA...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTCATCTGATCACGGGAAGGAAAGACCGTaGCCCCTTCACCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VVAGPMPLLPRTPLSSDHGKERP*PLHPPP
Trigger: AGGAGGAGGGTGAAGGGGCCACGGTCTTTCCTTCCC...GTGATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATTTTGTTGGTTGTTGCTaGACCTATGCCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHFVGCC*TYASSP
Trigger: GGGAGAAGAGGCATAGGTCCAGCAACAACCAACAAA...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGCCCGGGCTCTAGAAGTCTaGGAGGCCGGAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRMDLRIPSFYIPGGLEARALEV*EAGGLL
Trigger: GAGCAGGCCTCCGGCCTCCCAGACTTCTAGAGCCCG...GGCCTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATAAGAGCTCACCCTTGTaGCCTGAACATAACAGACAT +
Preference number: 4 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYKSSPL*PEHNRH
Trigger: ATGTCTGTTATGTTCAGGGCACAAGGGTGAGCTCTT...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTCATCTGATCACCTGGTTAGGCCTCTCTaGTCAGCTCCACACCCAGTG +
Preference number: 4 (lower is better)
Translates to: VVAGPMPLLPRTPLSSDHLVRPL*SAPHPV
Trigger: CACTGGGTGTGGAGCTGAGCAGAGAGGCCTAACCAG...GTGATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGAGGGAATCCAGCATTTaGGAAACCAGATCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LATGEIRDLRAPCSGYRERESSI*ETRSVL
Trigger: GAGAACAGATCTGGTTTCCCAAATGCTGGATTCCCT...CTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp AACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCAAGCCTAAGAATGGGGACCAGTaGACCCAAGGATGGATGCGT +
Preference number: 4 (lower is better)
Translates to: NLGDWDRSASLPYLFCKPKNGDQ*TQGWMR
Trigger: ACGCATCCATCCTTGGGTCCACTGGTCCCCATTCTT...AGGCTTGCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGCCTTGGCCTCCCGCTCCTaGGACGCCGCTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GRMDLRIPSFYIPGGLEALASRS*DAAFLF
Trigger: GAAAAGGAAAGCGGCGTCGCAGGAGCGGGAGGCCAA...GGCCTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGATCACACCCCACGCCTaGTGGCTTCTGGTGACCGGC +
Preference number: 4 (lower is better)
Translates to: DGRMDLRIPSFYIPGGLEITPHA*WLLVTG
Trigger: GCCGGTCACCAGAAGCCAGCAGGCGTGGGGTGTGAT...CTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp TTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTATATACCAGGAGGCCTaGAGGCCTGGAGAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LIMTLGDTEAAQKPSNSVIYQEA*RPGEGK
Trigger: CTTTCCCTCTCCAGGCCTCCAGGCCTCCTGGTATAT...AACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTCATCTGATCACGCCCTCAACCAAACCTaGGAGACTGGGATAGGAGTG +
Preference number: 4 (lower is better)
Translates to: VVAGPMPLLPRTPLSSDHALNQT*ETGIGV
Trigger: CACTCCTATCCCAGTCTCCCAGGTTTGGTTGAGGGC...GTGATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGTGGGCGATACCACCTaGGAGGGAGATCGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: DGRMDLRIPSFYIPGGLEVGDTT*EGDRGH
Trigger: GTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCAC...CTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp TTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTGGTGTAAAAGGCGACTaGTCGACAGCCGCTTTTGAC +
Preference number: 4 (lower is better)
Translates to: LIMTLGDTEAAQKPSNSVGVKGD*STAAFD
Trigger: GTCAAAAGCGGCTGTCGAGCAGTCGCCTTTTACACC...AACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp AACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCAAGCCTGGGGTTGGAACATATTaGGATCGTATCACTACGCAC +
Preference number: 4 (lower is better)
Translates to: NLGDWDRSASLPYLFCKPGVGTY*DRITTH
Trigger: GTGCGTAGTGATACGATCCCAATATGTTCCAACCCC...AGGCTTGCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTAGAGTCAGGGGCTGTGTaGCGGCGGATACGGGACACG +
Preference number: 4 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLESGAV*RRIRDT
Trigger: CGTGTCCCGTATCCGCCGCCACACAGCCCCTGACTC...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp AAATCCTCACAACAACCCTGCGAGGTAGGTGTTTATAAACCCCCATTTGACAGAGCCGGGATTAGCAACTaGGGAGATCCGCGACCTGCG +
Preference number: 4 (lower is better)
Translates to: KSSQQPCEVGVYKPPFDRAGISN*GDPRPA
Trigger: CGCAGGTCGCGGATCTCCCCAGTTGCTAATCCCGGC...TCTGTCAAATGGGGGTTTATAAACACCTACCTCGCAGGGTTGTTGTGAGGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTACCTGCTGGCTTCTGGTaGCCGGCCTCTTTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLPAGFW*PASFLA
Trigger: GGCAAGGAAAGAGGCCGGTCACCAGAAGCCAGCAGG...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GCCAAGTTCACATGGCTAATAAATGGCAGACAGAGGAGGTGTCCAAGGATCGGACTCAGGGAGGTGAAGTaGTGTGGCCAAGTTCACATG +
Preference number: 4 (lower is better)
Translates to: AKFTWLINGRQRRCPRIGLREVK*CGQVHM
Trigger: CATGTGAACTTGGCCACATCACTTCACCTCCCTGAG...TCCGATCCTTGGACACCTCCTCTGTCTGCCATTTATTAGCCATGTGAACTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp AAATCCTCACAACAACCCTGCGAGGTAGGTGTTTATAAACCCCCATTTGACAGACTTCACCCTCCTCCTTaGCGGGCTTCGATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KSSQQPCEVGVYKPPFDRLHPPP*RASIGW
Trigger: CCAGCCAATCGAAGCCCGGCAAGGAGGAGGGTGAAG...TCTGTCAAATGGGGGTTTATAAACACCTACCTCGCAGGGTTGTTGTGAGGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 72 bp CCTCAGTCAACCAGCAACTCAGTGGCAGAGTTGGGATaGAAATCCAAGACTTGTGACACCAAGGTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PQSTSNSVAELG*KSKTCDTKVSP
Trigger: AGGGCTCACCTTGGTGTCACAAGTCTTGGATTTCAATCCCAACTCTGCCACTGAGTTGCTGGTTGACTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 72 bp GACTGGCCTCAGTCAACCAGCAACTCAGTGGCAGAGTaGGGATTGAAATCCAAGACTTGTGACACCAAGGTG +
Preference number: 4 (lower is better)
Translates to: DWPQSTSNSVAE*GLKSKTCDTKV
Trigger: CACCTTGGTGTCACAAGTCTTGGATTTCAATCCCAACTCTGCCACTGAGTTGCTGGTTGACTGAGGCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTAACAGGGAGCCGCAGTTaGAGACCCCGCAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLTGSRS*RPRRSY
Trigger: ATAGCTCCTGCGGGGTCTGCAACTGCGGCTCCCTGT...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp ACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGGCTTTGGCTTGGGGATaGCTGTCGCTACCACTGTTC +
Preference number: 4 (lower is better)
Translates to: TEGWTLEYHHFIYQEAWRALAWG*LSLPLF
Trigger: GAACAGTGGTAGCGACAGCCATCCCCAAGCCAAAGC...CCTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GTTGTTGCTGGACCTATGCCTCTTCTCCCAAGAACCCCTCTGTCATCTGATCACTCCTCACAACAACCCTaGGAGGTAGGTGTTTATAAA +
Preference number: 4 (lower is better)
Translates to: VVAGPMPLLPRTPLSSDHSSQQP*EVGVYK
Trigger: TTTATAAACACCTACCTCGCAGGGTTGTTGTGAGGA...GTGATCAGATGACAGAGGGGTTCTTGGGAGAAGAGGCATAGGTCCAGCAACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTATATCTTGCCCTGCCTTaGGGAGCCCTCAACCAAACC +
Preference number: 4 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLYLALP*GALNQT
Trigger: GGTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATA...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTACTTGTGACACCAAGGTaGGCCCTCCTTCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLLVTPR*ALLLLC
Trigger: ACAAAGCAGAAGGAGGGCTCACCTTGGTGTCACAAG...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp ACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGAGGACCTCCTCGGTTTaGCTTATGACATCTAGGATC +
Preference number: 4 (lower is better)
Translates to: TEGWTLEYHHFIYQEAWRRTSSV*LMTSRI
Trigger: GATCCTAGATGTCATAAGCCAAACCGAGGAGGTCCT...CCTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp AAATCCTCACAACAACCCTGCGAGGTAGGTGTTTATAAACCCCCATTTGACAGATTCCTATTTCCCTGTTaGGTCCCTCTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KSSQQPCEVGVYKPPFDRFLFPC*VPLMSL
Trigger: GAGGGACATCAGAGGGACCCAACAGGGAAATAGGAA...TCTGTCAAATGGGGGTTTATAAACACCTACCTCGCAGGGTTGTTGTGAGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp ACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGCTCCTTCTGCTTTGTTaGTTGTTGCTGGACCTATGC +
Preference number: 4 (lower is better)
Translates to: TEGWTLEYHHFIYQEAWRLLLLC*LLLDLC
Trigger: GCATAGGTCCAGCAACAACCAACAAAGCAGAAGGAG...CCTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR TCA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTAAAAGAGGTCCCAAGCTaGTTCATTGGTGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLKEVPS*FIGVLP
Trigger: GGGAAGGACACCAATGAATCAGCTTGGGACCTCTTT...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GAATTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTTCATTAATGGGCATATaGTTCCCTTCCTTTCATTTA +
Preference number: 4 (lower is better)
Translates to: ELIMTLGDTEAAQKPSNSSLMGI*FPSFHL
Trigger: TAAATGAAAGGAAGGGAAGCATATGCCCATTAATGA...AGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGTGGAAGAGGCCAAGATaGGAGAAATTCTCAGGATTT +
Preference number: 4 (lower is better)
Translates to: DGRMDLRIPSFYIPGGLEWKRPR*EKFSGF
Trigger: AAATCCTGAGAATTTCTCCCATCTTGGCCTCTTCCA...CTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CCA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTACACATGGCTAATAAATaGCAGACAGAGGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLHMANK*QTEEVS
Trigger: GGACACCTCCTCTGTCTGCCATTTATTAGCCATGTG...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
3UTR CAA 72 bp CCTCAAACTCTGTTCACTTATTCCCAATTCTCATTCTaGGCTTGTCGAGGGGAGGATGAGATAGAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: PQTLFTYSQFSF*ACRGEDEIESF
Trigger: AAAGGACTCTATCTCATCCTCCCCTCGACAAGCCAAGAATGAGAATTGGGAATAAGTGAACAGAGTTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR GCA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTATGCTTTGTTGGTTGTTaGTGGACCTATGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLCFVGC*WTYASS
Trigger: AGAAGAGGCATAGGTCCAGCAACAACCAACAAAGCA...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 90 bp GGCCGGCGCGCCGCTGGACCACCGCCACTTCCGACCCCTCGGCTCTaGCCTGGGCTCCCGAAGCTGCTGGGCCTAAGGCTTGGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: GRRAAGPPPLPTPRL*PGLPKLLGLRLGAL
Trigger: CAGAGCACCAAGCCTTAGGCCCAGCAGCTTCGGGAGCCCAGGGCAGAGCCGAGGGGTCGGAAGTGGCGGTGGTCCAGCGGCGCGCCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp CCCGGGCGCGGCCCACACGTGCGGTTCTGGAACCCGCGAGCCCAGTaGCTGGCCTGGAAGTCCATGGGCTGTCGAGAAGGGGCGCGGCGA +
Preference number: 5 (lower is better)
Translates to: PGRGPHVRFWNPRAQ*LAWKSMGCREGARR
Trigger: TCGCCGCGCCCCTTCTCGACAGCCCATGGACTTCCAGGCCAGCCACTGGGCTCGCGGGTTCCAGAACCGCACGTGTGGGCCGCGCCCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 90 bp CCCGAAGCTGCTGGGCCTAAGGCTTGGTGCTCTGGGCTACCTGGCTaGGTGGGGGCGTCCCGCAGGTTTACTTCGGGGGCCGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: PEAAGPKAWCSGLPG*VGASRRFTSGAGSP
Trigger: GGGGCTCCCGGCCCCCGAAGTAAACCTGCGGGACGCCCCCACGCAGCCAGGTAGCCCAGAGCACCAAGCCTTAGGCCCAGCAGCTTCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp GCGCGCCGCTGGACCACCGCCACTTCCGACCCCTCGGCTCTGCCCTaGGCTCCCGAAGCTGCTGGGCCTAAGGCTTGGTGCTCTGGGCTA +
Preference number: 5 (lower is better)
Translates to: ARRWTTATSDPSALP*APEAAGPKAWCSGL
Trigger: TAGCCCAGAGCACCAAGCCTTAGGCCCAGCAGCTTCGGGAGCCCAGGGCAGAGCCGAGGGGTCGGAAGTGGCGGTGGTCCAGCGGCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp GGCGCGGCCCACACGTGCGGTTCTGGAACCCGCGAGCCCAGTGGCTaGCCTGGAAGTCCATGGGCTGTCGAGAAGGGGCGCGGCGACTAT +
Preference number: 5 (lower is better)
Translates to: GAAHTCGSGTREPSG*PGSPWAVEKGRGDY
Trigger: ATAGTCGCCGCGCCCCTTCTCGACAGCCCATGGACTTCCAGGCCAGCCACTGGGCTCGCGGGTTCCAGAACCGCACGTGTGGGCCGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp AGAAGGTGGAGCCACGTAGGGTGGCGGCCGGTCCCAGCGGCGTCGTaGGGCGGTCCCGGCAGAACCTCTCAGCAGCAGGTGAGCCTCGTA +
Preference number: 5 (lower is better)
Translates to: RRWSHVGWRPVPAAS*GGPGRTSQQQVSLV
Trigger: TACGAGGCTCACCTGCTGCTGAGAGGTTCTGCCGGGACCGCCCCACGACGCCGCTGGGACCGGCCGCCACCCTACGTGGCTCCACCTTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp CAAGGTCCTATGGGGGCCTTCGTAAGAAGGTGGAGCCACGTAGGGTaGCGGCCGGTCCCAGCGGCGTCGTGGGGCGGTCCCGGCAGAACC +
Preference number: 5 (lower is better)
Translates to: QGPMGAFVRRWSHVG*RPVPAASWGGPGRT
Trigger: GGTTCTGCCGGGACCGCCCCACGACGCCGCTGGGACCGGCCGCCACCCTACGTGGCTCCACCTTCTTACGAAGGCCCCCATAGGACCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp CCCTCGGCTCTGCCCTGGGCTCCCGAAGCTGCTGGGCCTAAGGCTTaGTGCTCTGGGCTACCTGGCTGCGTGGGGGCGTCCCGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: PSALPWAPEAAGPKA*CSGLPGCVGASRRF
Trigger: AAACCTGCGGGACGCCCCCACGCAGCCAGGTAGCCCAGAGCACCAAGCCTTAGGCCCAGCAGCTTCGGGAGCCCAGGGCAGAGCCGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 90 bp GTGCCTGGATCTGGGAGCGGGATGCGGGGCACAGGGAGCCGCAGTTaGAGACCCCGCAGGAGCTATCTCGGTGCCTGCGCTCCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: VPGSGSGMRGTGSRS*RPRRSYLGACAPCS
Trigger: GCTACAGGGAGCGCAGGCACCGAGATAGCTCCTGCGGGGTCTGCAACTGCGGCTCCCTGTGCCCCGCATCCCGCTCCCAGATCCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp CTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCACTAAGGAGCATCGGGGTGGGTGAGCCTCGTAGCTaGGGGGCCCGGGCCGCCGAC +
Preference number: 5 (lower is better)
Translates to: LGGRSWPRLRASLRSIGVGEPRS*GARAAD
Trigger: GTCGGCGGCCCGGGCCCCCAAGCTACGAGGCTCACC...CACCCCGATGCTCCTTAGTGATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 90 bp GTGGGCACGGCGGGTCGCCTTCCAACCCTCCAGGGTCTCCGGTCCTaGCCCCTCTCCAAGACCCAGAGATTCTCTCCATCCGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: VGTAGRLPTLQGLRS*PLSKTQRFSPSGAS
Trigger: GGAGGCACCGGATGGAGAGAATCTCTGGGTCTTGGAGAGGGGGCAGGACCGGAGACCCTGGAGGGTTGGAAGGCGACCCGCCGTGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 90 bp TCGGCTCTGCCCTGGGCTCCCGAAGCTGCTGGGCCTAAGGCTTGGTaGTCTGGGCTACCTGGCTGCGTGGGGGCGTCCCGCAGGTTTACT +
Preference number: 5 (lower is better)
Translates to: SALPWAPEAAGPKAW*SGLPGCVGASRRFT
Trigger: AGTAAACCTGCGGGACGCCCCCACGCAGCCAGGTAGCCCAGAGCACCAAGCCTTAGGCCCAGCAGCTTCGGGAGCCCAGGGCAGAGCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp CACGTGGCGTCAATGACAAAGACGCCTTCCCCACGGGACAGGCCCTaGGAACTGCGGGGCAAGGTGTGGGCACGGCGGGTCGCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: HVASMTKTPSPRDRP*ELRGKVWARRVAFQ
Trigger: TTGGAAGGCGACCCGCCGTGCCCACACCTTGCCCCGCAGTTCCCAGGGCCTGTCCCGTGGGGAAGGCGTCTTTGTCATTGACGCCACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 90 bp CCCCGAGGACGTCCCGGTAGATCCGAGGATCCAGCCTCTTCTTTGTaGGCCCTCCGTCTGTCCTGGCTGGAGTCGCAGCTGGGGCTGATG +
Preference number: 5 (lower is better)
Translates to: PRGRPGRSEDPASSL*ALRLSWLESQLGLM
Trigger: CATCAGCCCCAGCTGCGACTCCAGCCAGGACAGACGGAGGGCGCACAAAGAAGAGGCTGGATCCTCGGATCTACCGGGACGTCCTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp AGCTTGGACTTCTGCACCCAGAGGCAGCTGCCAGACTCCTCATCCTaGAGCTCCCGGGGGCTGTCAGGCCCCTCGGAGAACAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: SLDFCTQRQLPDSSS*SSRGLSGPSENSGP
Trigger: TGGCCCACTGTTCTCCGAGGGGCCTGACAGCCCCCGGGAGCTCCAGGATGAGGAGTCTGGCAGCTGCCTCTGGGTGCAGAAGTCCAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGCTTGCCGGGCTTCGATaGGCTGGGGGAATCCCCCAC +
Preference number: 5 (lower is better)
Translates to: TCARPVVAIESITPHACWLAGLR*AGGIPH
Trigger: GTGGGGGATTCCCCCAGCCAATCGAAGCCCGGCAAG...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 90 bp ACAGGGAGCCGCAGTTGCAGACCCCGCAGGAGCTATCTCGGTGCCTaGGCTCCCTGTAGCTTTGGCTTGGGGATGGCTGTCGCTACCACT +
Preference number: 5 (lower is better)
Translates to: TGSRSCRPRRSYLGA*APCSFGLGMAVATT
Trigger: AGTGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGCTCCTGCGGGGTCTGCAACTGCGGCTCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp GGAGCTATCTCGGTGCCTGCGCTCCCTGTAGCTTTGGCTTGGGGATaGCTGTCGCTACCACTGTTCAGGTCAGCAGCAGCCAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GAISVPALPVALAWG*LSLPLFRSAAASPR
Trigger: CCTGGGGCTGGCTGCTGCTGACCTGAACAGTGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp CCCGCAGGAGCTATCTCGGTGCCTGCGCTCCCTGTAGCTTTGGCTTaGGGATGGCTGTCGCTACCACTGTTCAGGTCAGCAGCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PAGAISVPALPVALA*GWLSLPLFRSAAAS
Trigger: GCTGGCTGCTGCTGACCTGAACAGTGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGCTCCTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATTTTCGCTCGGTCTCCTaGGCCTCCCGCTCCTGCGAC +
Preference number: 5 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYFRSVS*ASRSCD
Trigger: GTCGCAGGAGCGGGAGGCCAAGGAGACCGAGCGAAA...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATTTCTCCACGACCCCCTaGCCGGGCTCTGGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHFSTTP*PGSGLA
Trigger: AGCAAGGCCAGAGCCCGGCAAGGGGGTCGTGGAGAA...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 90 bp CAGATCTGTTCTCCTTCTTTCCCTTCCCTCGAGCCCTTGAGGTGGTaGCTGGATCTGGGAGCGGGATGCGGGGCACAGGGAGCCGCAGTT +
Preference number: 5 (lower is better)
Translates to: QICSPSFPSLEPLRW*LDLGAGCGAQGAAV
Trigger: AACTGCGGCTCCCTGTGCCCCGCATCCCGCTCCCAGATCCAGGCACCACCTCAAGGGCTCGAGGGAAGGGAAAGAAGGAGAACAGATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp TTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTGGCCCCGCCCGCCAGTaGGTCGCCTCCTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: LIMTLGDTEAAQKPSNSVGPARQ*VASCST
Trigger: GGTGCTGCAGGAGGCGACCAACTGGCGGGCGGGGCC...AACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp GGGATAGGATTGAGTGGCAGAGCCGGGATTAGCAACTGGGGAGATCCGCGACCTCACAGGGAGCCGCAGTaGCAGACCCCGCAGGAGCTA +
Preference number: 5 (lower is better)
Translates to: GIGLSGRAGISNWGDPRPHREPQ*QTPQEL
Trigger: TAGCTCCTGCGGGGTCTGCAACTGCGGCTCCCTGTG...AGGTCGCGGATCTCCCCAGTTGCTAATCCCGGCTCTGCCACTCAATCCTATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGGACCGGCCTCTTTCCTaGCCTGGCCGGTTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: TCARPVVAIESITPHACWDRPLS*PGRFLE
Trigger: TTCCAGAAACCGGCCAGGCAAGGAAAGAGGCCGGTC...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp AGATCCGAGGATCCAGCCTCTTCTTTGTGCGCCCTCCGTCTGTCCTaGCTGGAGTCGCAGCTGGGGCTGATGAAGTGGGCACCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: RSEDPASSLCALRLS*LESQLGLMKWAPES
Trigger: ACTCTCAGGTGCCCACTTCATCAGCCCCAGCTGCGACTCCAGCCAGGACAGACGGAGGGCGCACAAAGAAGAGGCTGGATCCTCGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 90 bp TCACTTCTATCACCAATAGCTTGGACTTCTGCACCCAGAGGCAGCTaGCAGACTCCTCATCCTGGAGCTCCCGGGGGCTGTCAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SLLSPIAWTSAPRGS*QTPHPGAPGGCQAP
Trigger: AGGGGCCTGACAGCCCCCGGGAGCTCCAGGATGAGGAGTCTGGCAGCTGCCTCTGGGTGCAGAAGTCCAAGCTATTGGTGATAGAAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp CTCCCCGACACTGTCGCTCAGTTCCGCTGTCTTCCCATCTTCCTCTaGCGAACTGTTTCCAACCTCGGGCAGGGTCCTCTCATTCCGCCA +
Preference number: 5 (lower is better)
Translates to: LPDTVAQFRCLPIFL*RTVSNLGQGPLIPP
Trigger: TGGCGGAATGAGAGGACCCTGCCCGAGGTTGGAAACAGTTCGCCAGAGGAAGATGGGAAGACAGCGGAACTGAGCGACAGTGTCGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCGCTTTCCTTTTCTCTaGCTCCCGAGCTCGGACCTC +
Preference number: 5 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHRFPFL*LPSSDL
Trigger: GAGGTCCGAGCTCGGGAGCAAGAGAAAAGGAAAGCG...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp CGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGCTTCTGGTGGATCCAGCCTCTTCTTaGTGCGCCCTCCGTCTGTCC +
Preference number: 5 (lower is better)
Translates to: RPVVAIESITPHACWLLVDPASS*CALRLS
Trigger: GGACAGACGGAGGGCGCACAAAGAAGAGGCTGGATC...CACCAGAAGCCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp TTTCAGGTGGGCGATACCACCTGGGAGGGAGATCGTGGCCACGCCTCAGAGCATCTATCTTGCCCTGCCTaGGGGAGCCCTCAACCAAAC +
Preference number: 5 (lower is better)
Translates to: FQVGDTTWEGDRGHASEHLSCPA*GSPQPN
Trigger: GTTTGGTTGAGGGCTCCCCAAGGCAGGGCAAGATAG...ATGCTCTGAGGCGTGGCCACGATCTCCCTCCCAGGTGGTATCGCCCACCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS TCA 90 bp GGGTTGGAACATATTGGGATCGTATCACTACGCACGTGGCGTCAATaGCAAAGACGCCTTCCCCACGGGACAGGCCCTGGGAACTGCGGG +
Preference number: 5 (lower is better)
Translates to: GLEHIGIVSLRTWRQ*QRRLPHGTGPGNCG
Trigger: CCCGCAGTTCCCAGGGCCTGTCCCGTGGGGAAGGCGTCTTTGTCATTGACGCCACGTGCGTAGTGATACGATCCCAATATGTTCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp CAACCAAACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCCCTTCCCTCGAGCCCTaGAGGTGGTGCCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: QPNLGDWDRSASLPYLFCPSLEP*RWCLDL
Trigger: CAGATCCAGGCACCACCTCAAGGGCTCGAGGGAAGG...GCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTTTGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp ACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGGCGAAGAGCTCACCCTaGTGCCCTGAACATAACAGA +
Preference number: 5 (lower is better)
Translates to: TCARPVVAIESITPHACWAKSSP*CPEHNR
Trigger: TCTGTTATGTTCAGGGCACAAGGGTGAGCTCTTCGC...CCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCGCGCGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp TGGGTCCCTCTGATGTCCCTCACCCCGAAGAGGACCTCCTCGGTTTaGCTTATGACATCTAGGATCTCCCCGACACTGTCGCTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: WVPLMSLTPKRTSSV*LMTSRISPTLSLSS
Trigger: GGAACTGAGCGACAGTGTCGGGGAGATCCTAGATGTCATAAGCCAAACCGAGGAGGTCCTCTTCGGGGTGAGGGACATCAGAGGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp TTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGAGCCCTCCTTCTGCTTaGTTGGTTGTTGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: LATGEIRDLRAPCSGYRESPPSA*LVVAGP
Trigger: AGGTCCAGCAACAACCAACAAAGCAGAAGGAGGGCT...CTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp TTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTCCTTCACCCTCCTCCTaGCCGGGCTTCGATTGGCTG +
Preference number: 5 (lower is better)
Translates to: LIMTLGDTEAAQKPSNSVPSPSS*PGFDWL
Trigger: CAGCCAATCGAAGCCCGGCAAGGAGGAGGGTGAAGG...AACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp GGATTAGCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGACTGCTTTGTTGGTTGTaGCTGGACCTATGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GLATGEIRDLRAPCSGYRLLCWL*LDLCLF
Trigger: GAAGAGGCATAGGTCCAGCAACAACCAACAAAGCAG...TCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGCTAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 90 bp CAAATACAAGAAGGGGCCTCTCACTGCCTCTTCCTATTTCCCTGTTaGGTCCCTCTGATGTCCCTCACCCCGAAGAGGACCTCCTCGGTT +
Preference number: 5 (lower is better)
Translates to: QIQEGASHCLFLFPC*VPLMSLTPKRTSSV
Trigger: AACCGAGGAGGTCCTCTTCGGGGTGAGGGACATCAGAGGGACCCAACAGGGAAATAGGAAGAGGCAGTGAGAGGCCCCTTCTTGTATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp CGCCCTGTAGTGGCTATAGAGAGTATCACACCCCACGCCTGCTGGCTTCTGGTGTCTATCACCAATAGCTaGGACTTCTGCACCCAGAGG +
Preference number: 5 (lower is better)
Translates to: RPVVAIESITPHACWLLVSITNS*DFCTQR
Trigger: CCTCTGGGTGCAGAAGTCCAAGCTATTGGTGATAGA...CACCAGAAGCCAGCAGGCGTGGGGTGTGATACTCTCTATAGCCACTACAGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp GAATTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTCCCTGTAGCTTTGGCTaGGGGATGGCTGTCGCTACC +
Preference number: 5 (lower is better)
Translates to: ELIMTLGDTEAAQKPSNSPCSFG*GMAVAT
Trigger: GGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGG...AGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 90 bp AGGATGGATGCGTTGGGGACACAAATACAAGAAGGGGCCTCTCACTaGCTCTTCCTATTTCCCTGTTGGGTCCCTCTGATGTCCCTCACC +
Preference number: 5 (lower is better)
Translates to: RMDALGTQIQEGASH*LFLFPCWVPLMSLT
Trigger: GGTGAGGGACATCAGAGGGACCCAACAGGGAAATAGGAAGAGGCAGTGAGAGGCCCCTTCTTGTATTTGTGTCCCCAACGCATCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp GCAACTGGGGAGATCCGCGACCTGCGCGCGCCCTGTAGTGGCTATAGAGAGTATAACTCAGTGGCAGAGTaGGGATTGAAATCCAAGACT +
Preference number: 5 (lower is better)
Translates to: ATGEIRDLRAPCSGYREYNSVAE*GLKSKT
Trigger: AGTCTTGGATTTCAATCCCAACTCTGCCACTGAGTT...ATACTCTCTATAGCCACTACAGGGCGCGCGCAGGTCGCGGATCTCCCCAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp GGGAAGAATGGGGACCAGTGGACCCAAGGATGGATGCGTTGGGGACACAAATACGAACTAGGGATAGGATaGAGTGGCAGAGCCGGGATT +
Preference number: 5 (lower is better)
Translates to: GKNGDQWTQGWMRWGHKYELGIG*SGRAGI
Trigger: AATCCCGGCTCTGCCACTCAATCCTATCCCTAGTTC...GTATTTGTGTCCCCAACGCATCCATCCTTGGGTCCACTGGTCCCCATTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp AACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCAAGCCTGGGGGTTGGAACATATaGGGATCGTATCACTACGCA +
Preference number: 5 (lower is better)
Translates to: NLGDWDRSASLPYLFCKPGGWNI*GSYHYA
Trigger: TGCGTAGTGATACGATCCCAATATGTTCCAACCCCC...AGGCTTGCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp AACCTGGGAGACTGGGATAGGAGTGCCTCACTCCCTTACCTCTTCTGCAAGCCTTCCCAATTCTCATTCTaGGCTTGTCGAGGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: NLGDWDRSASLPYLFCKPSQFSF*ACRGED
Trigger: ATCCTCCCCTCGACAAGCCAAGAATGAGAATTGGGA...AGGCTTGCAGAAGAGGTAAGGGAGTGAGGCACTCCTATCCCAGTCTCCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp TGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTCACTTATTCCCAAGGGCAGTCTCCTGAATaGATCATGACTTTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: WVTRRPPRNPQTLFTYSQGQSPE*IMTLGD
Trigger: GTCACCCAAAGTCATGATCAATTCAGGAGACTGCCC...TTGGGAATAAGTGAACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp GATAGAGTCCTTTCCAAAGATCTCAAAATGTCAGAGACGGAAGGATGGACCTTAGCGCTCCCTGTAGCTTaGGCTTGGGGATGGCTGTCG +
Preference number: 5 (lower is better)
Translates to: DRVLSKDLKMSETEGWTLALPVA*AWGWLS
Trigger: CGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGC...TAAGGTCCATCCTTCCGTCTCTGACATTTTGAGATCTTTGGAAAGGACTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp TTGATCATGACTTTGGGTGACACGGAGGCCGCCCAGAAACCCTCAAACTCTGTTCTTCTGCTTTGTTGGTaGTTGCTGGACCTATGCCTC +
Preference number: 5 (lower is better)
Translates to: LIMTLGDTEAAQKPSNSVLLLCW*LLDLCL
Trigger: GAGGCATAGGTCCAGCAACAACCAACAAAGCAGAAG...AACAGAGTTTGAGGGTTTCTGGGCGGCCTCCGTGTCACCCAAAGTCATGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp GGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGCCGAATTGATCATGACTTaGGGTGACACGGAGGCCGCC +
Preference number: 5 (lower is better)
Translates to: GRMDLRIPSFYIPGGLEAELIMT*GDTEAA
Trigger: GGCGGCCTCCGTGTCACCCAAAGTCATGATCAATTC...GGCCTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp GCCAAGTTCACATGGCTAATAAATGGCAGACAGAGGAGGTGTCCAAGGATCGGACCAAGGATGGATGCGTaGGGGACACAAATACAAGAA +
Preference number: 5 (lower is better)
Translates to: AKFTWLINGRQRRCPRIGPRMDA*GTQIQE
Trigger: TTCTTGTATTTGTGTCCCCAACGCATCCATCCTTGG...TCCGATCCTTGGACACCTCCTCTGTCTGCCATTTATTAGCCATGTGAACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS-3UTR CAA 90 bp ACGGAAGGATGGACCTTAGAATACCATCATTTTATATACCAGGAGGCCTGGAGGGTGGCAGAGTTGGGATaGAAATCCAAGACTTGTGAC +
Preference number: 5 (lower is better)
Translates to: TEGWTLEYHHFIYQEAWRVAELG*KSKTCD
Trigger: GTCACAAGTCTTGGATTTCAATCCCAACTCTGCCAC...CCTCCAGGCCTCCTGGTATATAAAATGATGGTATTCTAAGGTCCATCCTTCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp CCACGCCGACCCTGGGTCGCTCTGCGGCTGCGCGGATaGACGGGGCGCTCGCCCCACAGGCGCCAGGCGCTC +
Preference number: 6 (lower is better)
Translates to: PRRPWVALRLRG*TGRSPHRRQAL
Trigger: GAGCGCCTGGCGCCTGTGGGGCGAGCGCCCCGTCCATCCGCGCAGCCGCAGAGCGACCCAGGGTCGGCGTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 72 bp CCCTGGGCTCCCGAAGCTGCTGGGCCTAAGGCTTGGTaGTCTGGGCTACCTGGCTGCGTGGGGGCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: PWAPEAAGPKAW*SGLPGCVGASR
Trigger: GCGGGACGCCCCCACGCAGCCAGGTAGCCCAGAGCACCAAGCCTTAGGCCCAGCAGCTTCGGGAGCCCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 72 bp GCCGCTGGACCACCGCCACTTCCGACCCCTCGGCTCTaGCCTGGGCTCCCGAAGCTGCTGGGCCTAAGGCTT +
Preference number: 6 (lower is better)
Translates to: AAGPPPLPTPRL*PGLPKLLGLRL
Trigger: AAGCCTTAGGCCCAGCAGCTTCGGGAGCCCAGGGCAGAGCCGAGGGGTCGGAAGTGGCGGTGGTCCAGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp GGAGCCCCAAGATGCGGAAAGTGCGCTCCTCCAGTGTaGAGTCCCCCGGCCTCCCGCCCTCAGCTTCGCCCC +
Preference number: 6 (lower is better)
Translates to: GAPRCGKCAPPV*SPPASRPQLRP
Trigger: GGGGCGAAGCTGAGGGCGGGAGGCCGGGGGACTCCACACTGGAGGAGCGCACTTTCCGCATCTTGGGGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp CTGCCCTGGGCTCCCGAAGCTGCTGGGCCTAAGGCTTaGTGCTCTGGGCTACCTGGCTGCGTGGGGGCGTCC +
Preference number: 6 (lower is better)
Translates to: LPWAPEAAGPKA*CSGLPGCVGAS
Trigger: GGACGCCCCCACGCAGCCAGGTAGCCCAGAGCACCAAGCCTTAGGCCCAGCAGCTTCGGGAGCCCAGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 72 bp TCTGGGAGCGGGATGCGGGGCACAGGGAGCCGCAGTTaGAGACCCCGCAGGAGCTATCTCGGTGCCTGCGCT +
Preference number: 6 (lower is better)
Translates to: SGSGMRGTGSRS*RPRRSYLGACA
Trigger: AGCGCAGGCACCGAGATAGCTCCTGCGGGGTCTGCAACTGCGGCTCCCTGTGCCCCGCATCCCGCTCCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 72 bp GCTGGGCCTAAGGCTTGGTGCTCTGGGCTACCTGGCTaGGTGGGGGCGTCCCGCAGGTTTACTTCGGGGGCC +
Preference number: 6 (lower is better)
Translates to: AGPKAWCSGLPG*VGASRRFTSGA
Trigger: GGCCCCCGAAGTAAACCTGCGGGACGCCCCCACGCAGCCAGGTAGCCCAGAGCACCAAGCCTTAGGCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp GTGCGGTTCTGGAACCCGCGAGCCCAGTGGCTGGCCTaGAAGTCCATGGGCTGTCGAGAAGGGGCGCGGCGA +
Preference number: 6 (lower is better)
Translates to: VRFWNPRAQWLA*KSMGCREGARR
Trigger: TCGCCGCGCCCCTTCTCGACAGCCCATGGACTTCCAGGCCAGCCACTGGGCTCGCGGGTTCCAGAACCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp GGCCTAAGGCTTGGTGCTCTGGGCTACCTGGCTGCGTaGGGGCGTCCCGCAGGTTTACTTCGGGGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: GLRLGALGYLAA*GRPAGLLRGPG
Trigger: TCCCGGCCCCCGAAGTAAACCTGCGGGACGCCCCCACGCAGCCAGGTAGCCCAGAGCACCAAGCCTTAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp TGGACCACCGCCACTTCCGACCCCTCGGCTCTGCCCTaGGCTCCCGAAGCTGCTGGGCCTAAGGCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: WTTATSDPSALP*APEAAGPKAWC
Trigger: GCACCAAGCCTTAGGCCCAGCAGCTTCGGGAGCCCAGGGCAGAGCCGAGGGGTCGGAAGTGGCGGTGGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CAA 72 bp ATCTGGGAGCGGGATGCGGGGCACAGGGAGCCGCAGTaGCAGACCCCGCAGGAGCTATCTCGGTGCCTGCGC +
Preference number: 6 (lower is better)
Translates to: IWERDAGHREPQ*QTPQELSRCLR
Trigger: GCGCAGGCACCGAGATAGCTCCTGCGGGGTCTGCAACTGCGGCTCCCTGTGCCCCGCATCCCGCTCCCAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp CACACGTGCGGTTCTGGAACCCGCGAGCCCAGTGGCTaGCCTGGAAGTCCATGGGCTGTCGAGAAGGGGCGC +
Preference number: 6 (lower is better)
Translates to: HTCGSGTREPSG*PGSPWAVEKGR
Trigger: GCGCCCCTTCTCGACAGCCCATGGACTTCCAGGCCAGCCACTGGGCTCGCGGGTTCCAGAACCGCACGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp GGCCCACACGTGCGGTTCTGGAACCCGCGAGCCCAGTaGCTGGCCTGGAAGTCCATGGGCTGTCGAGAAGGG +
Preference number: 6 (lower is better)
Translates to: GPHVRFWNPRAQ*LAWKSMGCREG
Trigger: CCCTTCTCGACAGCCCATGGACTTCCAGGCCAGCCACTGGGCTCGCGGGTTCCAGAACCGCACGTGTGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp TCAATGACAAAGACGCCTTCCCCACGGGACAGGCCCTaGGAACTGCGGGGCAAGGTGTGGGCACGGCGGGTC +
Preference number: 6 (lower is better)
Translates to: SMTKTPSPRDRP*ELRGKVWARRV
Trigger: GACCCGCCGTGCCCACACCTTGCCCCGCAGTTCCCAGGGCCTGTCCCGTGGGGAAGGCGTCTTTGTCATTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CAA 90 bp AAGCCCCGAGGACGTCCCGGTAGATCCGAGGATCCAGCCTCTTCTTaGTGCGCCCTCCGTCTGTCCTGGCTGGAGTCGCAGCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: KPRGRPGRSEDPASS*CALRLSWLESQLGL
Trigger: CAGCCCCAGCTGCGACTCCAGCCAGGACAGACGGAGGGCGCACAAAGAAGAGGCTGGATCCTCGGATCTACCGGGACGTCCTCGGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 72 bp GCGGGTCGCCTTCCAACCCTCCAGGGTCTCCGGTCCTaGCCCCTCTCCAAGACCCAGAGATTCTCTCCATCC +
Preference number: 6 (lower is better)
Translates to: AGRLPTLQGLRS*PLSKTQRFSPS
Trigger: GGATGGAGAGAATCTCTGGGTCTTGGAGAGGGGGCAGGACCGGAGACCCTGGAGGGTTGGAAGGCGACCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp ATTCTCTCCATCCGGTGCCTCCGGGAGCCCAGGGTCTaGGGAGTGTCTGGCTATGGCGGGGCGGCTGCTTTT +
Preference number: 6 (lower is better)
Translates to: ILSIRCLREPRV*GVSGYGGAAAF
Trigger: AAAAGCAGCCGCCCCGCCATAGCCAGACACTCCCCAGACCCTGGGCTCCCGGAGGCACCGGATGGAGAGAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 72 bp CGTCCCGGTAGATCCGAGGATCCAGCCTCTTCTTTGTaGGCCCTCCGTCTGTCCTGGCTGGAGTCGCAGCTG +
Preference number: 6 (lower is better)
Translates to: RPGRSEDPASSL*ALRLSWLESQL
Trigger: CAGCTGCGACTCCAGCCAGGACAGACGGAGGGCGCACAAAGAAGAGGCTGGATCCTCGGATCTACCGGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 72 bp CGCAGTTGCAGACCCCGCAGGAGCTATCTCGGTGCCTaGGCTCCCTGTAGCTTTGGCTTGGGGATGGCTGTC +
Preference number: 6 (lower is better)
Translates to: RSCRPRRSYLGA*APCSFGLGMAV
Trigger: GACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGCTCCTGCGGGGTCTGCAACTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CAA 72 bp GGACGTCCCGGTAGATCCGAGGATCCAGCCTCTTCTTaGTGCGCCCTCCGTCTGTCCTGGCTGGAGTCGCAG +
Preference number: 6 (lower is better)
Translates to: GRPGRSEDPASS*CALRLSWLESQ
Trigger: CTGCGACTCCAGCCAGGACAGACGGAGGGCGCACAAAGAAGAGGCTGGATCCTCGGATCTACCGGGACGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CAA 90 bp CCCCGCAGGAGCTATCTCGGTGCCTGCGCTCCCTGTAGCTTTGGCTaGGGGATGGCTGTCGCTACCACTGTTCAGGTCAGCAGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: PRRSYLGACAPCSFG*GMAVATTVQVSSSQ
Trigger: CTGGCTGCTGCTGACCTGAACAGTGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGCTCCTGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CAA 90 bp GCAGACCCCGCAGGAGCTATCTCGGTGCCTGCGCTCCCTGTAGCTTaGGCTTGGGGATGGCTGTCGCTACCACTGTTCAGGTCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: ADPAGAISVPALPVA*AWGWLSLPLFRSAA
Trigger: TGCTGCTGACCTGAACAGTGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGCTCCTGCGGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp TCGGTGCCTGCGCTCCCTGTAGCTTTGGCTTGGGGATaGCTGTCGCTACCACTGTTCAGGTCAGCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: SVPALPVALAWG*LSLPLFRSAAA
Trigger: GGCTGCTGCTGACCTGAACAGTGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp GGGGCTTCTGTGTCGCTTCCATCAGAGGAGCCGCTATaGACGCTGAGCTCCTCAGCTTCGTCCGTGTCCGAG +
Preference number: 6 (lower is better)
Translates to: GASVSLPSEEPL*TLSSSASSVSE
Trigger: CTCGGACACGGACGAAGCTGAGGAGCTCAGCGTCCATAGCGGCTCCTCTGATGGAAGCGACACAGAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS TCA 72 bp AGATCTGTTCTCCTTCTTTCCCTTCCCTCGAGCCCTTaGGGTGGTGCCTGGATCTGGGAGCGGGATGCGGGG +
Preference number: 6 (lower is better)
Translates to: RSVLLLSLPSSP*GGAWIWERDAG
Trigger: CCCCGCATCCCGCTCCCAGATCCAGGCACCACCTCAAGGGCTCGAGGGAAGGGAAAGAAGGAGAACAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CAA 72 bp GCAGGAGCTATCTCGGTGCCTGCGCTCCCTGTAGCTTaGGCTTGGGGATGGCTGTCGCTACCACTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: AGAISVPALPVA*AWGWLSLPLFR
Trigger: CCTGAACAGTGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp GCTATCTCGGTGCCTGCGCTCCCTGTAGCTTTGGCTTaGGGATGGCTGTCGCTACCACTGTTCAGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: AISVPALPVALA*GWLSLPLFRSA
Trigger: TGCTGACCTGAACAGTGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CAA 72 bp AGCTATCTCGGTGCCTGCGCTCCCTGTAGCTTTGGCTaGGGGATGGCTGTCGCTACCACTGTTCAGGTCAGC +
Preference number: 6 (lower is better)
Translates to: SYLGACAPCSFG*GMAVATTVQVS
Trigger: GCTGACCTGAACAGTGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS TCA 72 bp CATATTGGGATCGTATCACTACGCACGTGGCGTCAATaGCAAAGACGCCTTCCCCACGGGACAGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: HIGIVSLRTWRQ*QRRLPHGTGPG
Trigger: CCCAGGGCCTGTCCCGTGGGGAAGGCGTCTTTGTCATTGACGCCACGTGCGTAGTGATACGATCCCAATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp ACTGTCGCTCAGTTCCGCTGTCTTCCCATCTTCCTCTaGCGAACTGTTTCCAACCTCGGGCAGGGTCCTCTC +
Preference number: 6 (lower is better)
Translates to: TVAQFRCLPIFL*RTVSNLGQGPL
Trigger: GAGAGGACCCTGCCCGAGGTTGGAAACAGTTCGCCAGAGGAAGATGGGAAGACAGCGGAACTGAGCGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS TCA 72 bp CCCTCACCCCGAAGAGGACCTCCTCGGTTTGGCTTATaGCATCTAGGATCTCCCCGACACTGTCGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: PSPRRGPPRFGL*HLGSPRHCRSV
Trigger: AACTGAGCGACAGTGTCGGGGAGATCCTAGATGTCATAAGCCAAACCGAGGAGGTCCTCTTCGGGGTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS TCA 72 bp CTCACTGCCTCTTCCTATTTCCCTGTTGGGTCCCTCTaGTGTCCCTCACCCCGAAGAGGACCTCCTCGGTTT +
Preference number: 6 (lower is better)
Translates to: LTASSYFPVGSL*CPSPRRGPPRF
Trigger: AAACCGAGGAGGTCCTCTTCGGGGTGAGGGACATCAGAGGGACCCAACAGGGAAATAGGAAGAGGCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp CTGATGTCCCTCACCCCGAAGAGGACCTCCTCGGTTTaGCTTATGACATCTAGGATCTCCCCGACACTGTCG +
Preference number: 6 (lower is better)
Translates to: LMSLTPKRTSSV*LMTSRISPTLS
Trigger: CGACAGTGTCGGGGAGATCCTAGATGTCATAAGCCAAACCGAGGAGGTCCTCTTCGGGGTGAGGGACATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS CCA 72 bp AAGAATGGGGACCAGTGGACCCAAGGATGGATGCGTTaGGGACACAAATACAAGAAGGGGCCTCTCACTGCC +
Preference number: 6 (lower is better)
Translates to: KNGDQWTQGWMR*GHKYKKGPLTA
Trigger: GGCAGTGAGAGGCCCCTTCTTGTATTTGTGTCCCCAACGCATCCATCCTTGGGTCCACTGGTCCCCATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3
CDS GCA 72 bp GCGTTGGGGACACAAATACAAGAAGGGGCCTCTCACTaGCTCTTCCTATTTCCCTGTTGGGTCCCTCTGATG +
Preference number: 6 (lower is better)
Translates to: ALGTQIQEGASH*LFLFPCWVPLM
Trigger: CATCAGAGGGACCCAACAGGGAAATAGGAAGAGGCAGTGAGAGGCCCCTTCTTGTATTTGTGTCCCCAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421952.3