RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDI2 (Homo sapiens)

Ensembl gene IDs: ENSG00000197312

Ensembl transcript IDs: ENST00000320153.10, ENST00000480945.6, ENST00000483899.1, ENST00000486680.1, ENST00000546927.1, ENST00000548451.1

Found 440 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCAGATGGTCAGTATTCCGGAGCAGCCGTGCTCACAAAGGGATGTaGGGAGGATGCTGCCGCACACTCCATGTTTCTACCCTGCATGTG +
Preference number: 1 (lower is better)
Translates to: PRWSVFRSSRAHKGM*GGCCRTLHVSTLHV
Trigger: CACATGCAGGGTAGAAACATGGAGTGTGCGGCAGCATCCTCCTCACATCCCTTTGTGAGCACGGCTGCTCCGGAATACTGACCATCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp CTGCTCACCCTCACCACAGGTGGCAAACAGGTAGGAAAAGGCCATTaGAACGCCCTGCAGCTTTTCTGGCCGATGATTTGCAAGGCTGTT +
Preference number: 1 (lower is better)
Translates to: LLTLTTGGKQVGKGH*NALQLFWPMICKAV
Trigger: AACAGCCTTGCAAATCATCGGCCAGAAAAGCTGCAGGGCGTTGCAATGGCCTTTTCCTACCTGTTTGCCACCTGTGGTGAGGGTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 90 bp GGAGGATGCTGCCGCACACTCCATGTTTCTACCCTGCATGTGAGGTaGTCTGATGGATTGACTGACTGTCACTGGTGCATTTTTAGGGTC +
Preference number: 1 (lower is better)
Translates to: GGCCRTLHVSTLHVR*SDGLTDCHWCIFRV
Trigger: GACCCTAAAAATGCACCAGTGACAGTCAGTCAATCCATCAGACCACCTCACATGCAGGGTAGAAACATGGAGTGTGCGGCAGCATCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 90 bp TCTCTCTCTGGTGAAGAAACAGAGACCGCCCTTGTAGTTAAGTGCTaGCCGCAGAACTGCCCACTACTGGTTATGGTAAAGGAGCTGTCC +
Preference number: 1 (lower is better)
Translates to: SLSGEETETALVVKC*PQNCPLLVMVKELS
Trigger: GGACAGCTCCTTTACCATAACCAGTAGTGGGCAGTTCTGCGGTCAGCACTTAACTACAAGGGCGGTCTCTGTTTCTTCACCAGAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 90 bp GCCACCGAGCCTAGCTGCAACTGGTTATCTTTATGTGTTAATAGCTaGAGCCCAAACTGTGGGATGAAGGCTATTGGCTGTCTGGAGCCC +
Preference number: 1 (lower is better)
Translates to: ATEPSCNWLSLCVNS*SPNCGMKAIGCLEP
Trigger: GGGCTCCAGACAGCCAATAGCCTTCATCCCACAGTTTGGGCTTCAGCTATTAACACATAAAGATAACCAGTTGCAGCTAGGCTCGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp ACTGTGAATCAACTCAGTCAAGGTGAGCCTGAGGACCACTCTGTGTaGCCTCCATCTCCAGGAGAGCTATTTTCAAACTTTCCCCTAATA +
Preference number: 1 (lower is better)
Translates to: TVNQLSQGEPEDHSV*PPSPGELFSNFPLI
Trigger: TATTAGGGGAAAGTTTGAAAATAGCTCTCCTGGAGATGGAGGGCACACAGAGTGGTCCTCAGGCTCACCTTGACTGAGTTGATTCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 90 bp CAGCAAACCATACCTTGCCATCAGCACAGACACACAGTCACAGTGTaGAGAGTTCATCTGTTTTTAGCTGGATGGGTAGTGGGATTTCTC +
Preference number: 1 (lower is better)
Translates to: QQTIPCHQHRHTVTV*RVHLFLAGWVVGFL
Trigger: GAGAAATCCCACTACCCATCCAGCTAAAAACAGATGAACTCTCCACACTGTGACTGTGTGTCTGTGCTGATGGCAAGGTATGGTTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 90 bp TGGGGACACCTTCCTTATCGGTTGACAGGCCATCACCTAGACTCCTaGAGTTTACATTTTCTACAGCTTCTCTTCCAGTGTCAGATGAAG +
Preference number: 1 (lower is better)
Translates to: WGHLPYRLTGHHLDS*SLHFLQLLFQCQMK
Trigger: CTTCATCTGACACTGGAAGAGAAGCTGTAGAAAATGTAAACTTCAGGAGTCTAGGTGATGGCCTGTCAACCGATAAGGAAGGTGTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp GCATCGTACATCTTTGGTGTAGGGCAGGTGAAAGGGTCTACAATGTaGAGCTGTCTAAAAGAACATCTTAAAGACAACCTGGCTGACCTG +
Preference number: 1 (lower is better)
Translates to: ASYIFGVGQVKGSTM*SCLKEHLKDNLADL
Trigger: CAGGTCAGCCAGGTTGTCTTTAAGATGTTCTTTTAGACAGCTGCACATTGTAGACCCTTTCACCTGCCCTACACCAAAGATGTACGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp TACATGTTCTGCTCTAGATTCCCGTTTTCACAAGTTGCACCCAGCTaGTTTAAAATAGCACATCCTGCAGAACCCTCTGCTAAGTCGTGC +
Preference number: 1 (lower is better)
Translates to: YMFCSRFPFSQVAPS*FKIAHPAEPSAKSC
Trigger: GCACGACTTAGCAGAGGGTTCTGCAGGATGTGCTATTTTAAAGCAGCTGGGTGCAACTTGTGAAAACGGGAATCTAGAGCAGAACATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp TGTCAATCCTGTCCACCAATCCCAGCCATCGCTGATTACATGTTCTaGTCTAGATTCCCGTTTTCACAAGTTGCACCCAGCTGCTTTAAA +
Preference number: 1 (lower is better)
Translates to: CQSCPPIPAIADYMF*SRFPFSQVAPSCFK
Trigger: TTTAAAGCAGCTGGGTGCAACTTGTGAAAACGGGAATCTAGAGCAGAACATGTAATCAGCGATGGCTGGGATTGGTGGACAGGATTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 90 bp ATTGTAACTCCCCCACAATATCCCATCCAATGTAATAAGGATTCATaGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGAT +
Preference number: 1 (lower is better)
Translates to: IVTPPQYPIQCNKDS*QSMQQPVMHKVAQD
Trigger: ATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCCTTATTACATTGGATGGGATATTGTGGGGGAGTTACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 90 bp CTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTaGTTATTACTGTTGGCAACCAGAATTCACAGGGATTTGATGGTA +
Preference number: 1 (lower is better)
Translates to: LLVMVKELSGKGAHY*LLLLATRIHRDLMV
Trigger: TACCATCAAATCCCTGTGAATTCTGGTTGCCAACAGTAATAACCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 90 bp AAGGAGACTTGTGGACACTGTTCATTCTGGGTAAGATGCTCATTTTaGGTCCATCTTTCAGAAAGGTCTTTAATACTGGTTTGGCCCTCA +
Preference number: 1 (lower is better)
Translates to: KETCGHCSFWVRCSF*VHLSERSLILVWPS
Trigger: TGAGGGCCAAACCAGTATTAAAGACCTTTCTGAAAGATGGACCCAAAATGAGCATCTTACCCAGAATGAACAGTGTCCACAAGTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 90 bp TCTACCCTGCATGTGAGGTGGTCTGATGGATTGACTGACTGTCACTaGTGCATTTTTAGGGTCATCTTCCATTTATTTGTTGCACTTCTT +
Preference number: 1 (lower is better)
Translates to: STLHVRWSDGLTDCH*CIFRVIFHLFVALL
Trigger: AAGAAGTGCAACAAATAAATGGAAGATGACCCTAAAAATGCACCAGTGACAGTCAGTCAATCCATCAGACCACCTCACATGCAGGGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 90 bp GTAATTACTATTTCCACTGCCACAAAGGACACTCTCCAAATAGACTaGCCGTTCCAAGCACCAAGATTAACCAGTGACAAGGTTATCACA +
Preference number: 1 (lower is better)
Translates to: VITISTATKDTLQID*PFQAPRLTSDKVIT
Trigger: TGTGATAACCTTGTCACTGGTTAATCTTGGTGCTTGGAACGGTCAGTCTATTTGGAGAGTGTCCTTTGTGGCAGTGGAAATAGTAATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp GGAAAAGGCCATTGCAACGCCCTGCAGCTTTTCTGGCCGATGATTTaGAAGGCTGTTTGCTATATATATATATATTTATATATGTGGCGG +
Preference number: 1 (lower is better)
Translates to: GKGHCNALQLFWPMI*KAVCYIYIYLYMWR
Trigger: CCGCCACATATATAAATATATATATATATAGCAAACAGCCTTGCAAATCATCGGCCAGAAAAGCTGCAGGGCGTTGCAATGGCCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 90 bp GCATTCTGCCTGCCTGTTGAATTAAGCAAAGTAACTAGGGACTGTTaGGCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCA +
Preference number: 1 (lower is better)
Translates to: AFCLPVELSKVTRDC*AVSISINVSEFEQP
Trigger: TGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGCTCAACAGTCCCTAGTTACTTTGCTTAATTCAACAGGCAGGCAGAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR TCA 90 bp GGTAGAATTCCAAACACCAAATTATGTGGTCAAAAGTTTCTAAATTaGCAACTGAGCCAGCAAACCATACCTTGCCATCAGCACAGACAC +
Preference number: 1 (lower is better)
Translates to: GRIPNTKLCGQKFLN*QLSQQTIPCHQHRH
Trigger: GTGTCTGTGCTGATGGCAAGGTATGGTTTGCTGGCTCAGTTGTCAATTTAGAAACTTTTGACCACATAATTTGGTGTTTGGAATTCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp GGTTGTTCTGTTCTTTTAAGAATCTGGGTAGCACCACGTTTCACTTaGATTGTAACTCCCCCACAATATCCCATCCAATGTAATAAGGAT +
Preference number: 1 (lower is better)
Translates to: GCSVLLRIWVAPRFT*IVTPPQYPIQCNKD
Trigger: ATCCTTATTACATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGTGAAACGTGGTGCTACCCAGATTCTTAAAAGAACAGAACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp TGCAACGCCCTGCAGCTTTTCTGGCCGATGATTTGCAAGGCTGTTTaGTATATATATATATATTTATATATGTGGCGGGATAAAAGCCAC +
Preference number: 1 (lower is better)
Translates to: CNALQLFWPMICKAV*YIYIYLYMWRDKSH
Trigger: GTGGCTTTTATCCCGCCACATATATAAATATATATATATATAGCAAACAGCCTTGCAAATCATCGGCCAGAAAAGCTGCAGGGCGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 90 bp GATGTATTTTCTGAAGCTGGTTTACTGCTAACAACCAAAAGTTCATaGAGTTCTTTCAAGGCTGCCGTTATAGACGGGCAAGATTCTTCT +
Preference number: 1 (lower is better)
Translates to: DVFSEAGLLLTTKSS*SSFKAAVIDGQDSS
Trigger: AGAAGAATCTTGCCCGTCTATAACGGCAGCCTTGAAAGAACTTCATGAACTTTTGGTTGTTAGCAGTAAACCAGCTTCAGAAAATACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR CCA 90 bp GACATCTGCAAATGGAATTATGGTTGTTCTGTTCTTTTAAGAATCTaGGTAGCACCACGTTTCACTTGCATTGTAACTCCCCCACAATAT +
Preference number: 1 (lower is better)
Translates to: DICKWNYGCSVLLRI*VAPRFTCIVTPPQY
Trigger: ATATTGTGGGGGAGTTACAATGCAAGTGAAACGTGGTGCTACCCAGATTCTTAAAAGAACAGAACAACCATAATTCCATTTGCAGATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 90 bp ATGAATCCATTCCTGAACTTAATTCCACCATTAGTCATTAAGGGTTaGGGTGTTATCAGTGAGATGCTAGCAAACCCAAACTCTAGCAAA +
Preference number: 1 (lower is better)
Translates to: MNPFLNLIPPLVIKG*GVISEMLANPNSSK
Trigger: TTTGCTAGAGTTTGGGTTTGCTAGCATCTCACTGATAACACCTCAACCCTTAATGACTAATGGTGGAATTAAGTTCAGGAATGGATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp ATACATTCCCAAACCACCACCCATAAAGCAAATACAGGGTCCCATTaGATTGCTACTAGATTTTGCATCAATCATAGCACCAACTATTTA +
Preference number: 1 (lower is better)
Translates to: IHSQTTTHKANTGSH*IATRFCINHSTNYL
Trigger: TAAATAGTTGGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGCTTTATGGGTGGTGGTTTGGGAATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 90 bp GAACTCCTAGTAACACCTACTGAGGAATCACTAAGGTATAAAACTTaGACCATGATTTTACATTTCCAGTTCTCAAGGACAGGCTTTGAA +
Preference number: 1 (lower is better)
Translates to: ELLVTPTEESLRYKT*TMILHFQFSRTGFE
Trigger: TTCAAAGCCTGTCCTTGAGAACTGGAAATGTAAAATCATGGTTCAAGTTTTATACCTTAGTGATTCCTCAGTAGGTGTTACTAGGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 90 bp TGTCAACCATTTCCTAACTACATAAAGGATCATGATGAATCTACGTaGCACGCCATCCCATCACTAAAGTCTTATAACATACATACAAAC +
Preference number: 1 (lower is better)
Translates to: CQPFPNYIKDHDEST*HAIPSLKSYNIHTN
Trigger: GTTTGTATGTATGTTATAAGACTTTAGTGATGGGATGGCGTGTCACGTAGATTCATCATGATCCTTTATGTAGTTAGGAAATGGTTGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp TTGCAGGTTTCTATATATACTGTATATGTGGTGAGTGTGTATGTGTaGGTGTATATAGAGAGAGCTTTCTTTTGTTTAAAGGGAATGGAG +
Preference number: 1 (lower is better)
Translates to: LQVSIYTVYVVSVYV*VYIERAFFCLKGME
Trigger: CTCCATTCCCTTTAAACAAAAGAAAGCTCTCTCTATATACACGCACACATACACACTCACCACATATACAGTATATATAGAAACCTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 90 bp ACCCATAAAGCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTaGATCAATCATAGCACCAACTATTTAATTACAATCACAGCTTTA +
Preference number: 1 (lower is better)
Translates to: THKANTGSHCIATRF*INHSTNYLITITAL
Trigger: TAAAGCTGTGATTGTAATTAAATAGTTGGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGCTTTATGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 90 bp CCTGCTCACCCTCACCACAGGTGGCAAACAGGTAGGAAAAGGCCATaGCAACGCCCTGCAGCTTTTCTGGCCGATGATTTGCAAGGCTGT +
Preference number: 2 (lower is better)
Translates to: PAHPHHRWQTGRKRP*QRPAAFLADDLQGC
Trigger: ACAGCCTTGCAAATCATCGGCCAGAAAAGCTGCAGGGCGTTGCAATGGCCTTTTCCTACCTGTTTGCCACCTGTGGTGAGGGTGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR GCA 90 bp TTCTTGGTCTGCAATCTCCTCTGGCCGTACATCCTCTCTTCCAGCCCCATATGCCCAGATGGTGGCTTCTaGTCAGTCCGGGGGTCATTT +
Preference number: 2 (lower is better)
Translates to: FLVCNLLWPYILSSSPICPDGGF*SVRGSF
Trigger: AAATGACCCCCGGACTGAGCAGAAGCCACCATCTGG...GCATATGGGGCTGGAAGAGAGGATGTACGGCCAGAGGAGATTGCAGACCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR-3UTR CCA 90 bp CTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCCTCATGATAGTCATCTaGGCACCAGATGGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: LVPFKHVQSQKHVHGLFLLMIVI*APDGGF
Trigger: GAAGCCACCATCTGGTGCCCAGATGACTATCATGAG...GAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR-3UTR GCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAGCCAGCACGGAGAATaGGGTCAATATCTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFSQHGE*GQYLWQ
Trigger: CTGCCACAGATATTGACCGCATTCTCCGTGCTGGCT...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 90 bp AAAGCCTTCACAGCTTTAGGTTCAATGCGATCTGAGTCACTGGGCTaGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATA +
Preference number: 2 (lower is better)
Translates to: KAFTALGSMRSESLG*IGQTEAETERARLI
Trigger: TATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGATCGCATTGAACCTAAAGCTGTGAAGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR CAA 90 bp AATCTGGTCAGCTTCTCTTGGGACACACTGCCAGTGATAACAGGTTaGAAATATGCAGCAGTTCAATCATCCTGCTCACCCTCACCACAG +
Preference number: 2 (lower is better)
Translates to: NLVSFSWDTLPVITG*KYAAVQSSCSPSPQ
Trigger: CTGTGGTGAGGGTGAGCAGGATGATTGAACTGCTGCATATTTCAAACCTGTTATCACTGGCAGTGTGTCCCAAGAGAAGCTGACCAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTGAAGAACGGGCGGGATaGTTAAACCCATCTGAAGTT +
Preference number: 2 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPEERAG*LNPSEV
Trigger: AACTTCAGATGGGTTTAACCATCCCGCCCGTTCTTC...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGGGACACTGTTCATTCTaGGTAAGATGCTCATTTTGG +
Preference number: 2 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWGHCSF*VRCSFW
Trigger: CCAAAATGAGCATCTTACCCAGAATGAACAGTGTCC...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 90 bp GAGGTTACAGTGACAGAACGGTTCTTATTTATGGATTCCCTAGATTaGGGGACACCTTCCTTATCGGTTGACAGGCCATCACCTAGACTC +
Preference number: 2 (lower is better)
Translates to: EVTVTERFLFMDSLD*GTPSLSVDRPSPRL
Trigger: GAGTCTAGGTGATGGCCTGTCAACCGATAAGGAAGGTGTCCCCAAATCTAGGGAATCCATAAATAAGAACCGTTCTGTCACTGTAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 90 bp CGCACACTCCATGTTTCTACCCTGCATGTGAGGTGGTCTGATGGATaGACTGACTGTCACTGGTGCATTTTTAGGGTCATCTTCCATTTA +
Preference number: 2 (lower is better)
Translates to: RTLHVSTLHVRWSDG*TDCHWCIFRVIFHL
Trigger: TAAATGGAAGATGACCCTAAAAATGCACCAGTGACAGTCAGTCAATCCATCAGACCACCTCACATGCAGGGTAGAAACATGGAGTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGTTAGTCATTAAGGGTTaGGGTGTTATCAGTGAGATG +
Preference number: 2 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWLVIKG*GVISEM
Trigger: CATCTCACTGATAACACCTCAACCCTTAATGACTAA...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR GCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCAGGGGCCCACTCCAGCTaGAGTACACACACACTACAT +
Preference number: 2 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSGAHSS*STHTLH
Trigger: ATGTAGTGTGTGTGTACTGCAGCTGGAGTGGGCCCC...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR GCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTAAGTTCTTTCAAGGCTaGCGTTATAGACGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPKFFQG*RYRRAR
Trigger: TCTTGCCCGTCTATAACGGCAGCCTTGAAAGAACTT...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGACTTTCTGCACAAGCTTaGCTCATGATAGTCATCTGG +
Preference number: 2 (lower is better)
Translates to: QTEAETERARLIGLPTSGLSAQA*LMIVIW
Trigger: CCAGATGACTATCATGAGCCAAGCTTGTGCAGAAAG...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR-3UTR CCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTACTTTTCTTCGCACTTaGAGGATCCACATTCTGTGG +
Preference number: 2 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFTFLRT*RIHILW
Trigger: CCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGT...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTGGACTTGATGATGGATaGCTGGTAGGTGGTTCATAT +
Preference number: 2 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFGLDDG*LVGGSY
Trigger: ATATGAACCACCTACCAGCCATCCATCATCAAGTCC...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGTCATCTGTTTTTAGCTaGATGGGTAGTGGGATTTCT +
Preference number: 2 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWSSVFS*MGSGIS
Trigger: AGAAATCCCACTACCCATCCAGCTAAAAACAGATGA...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAACTTGATAGGGCAGACTaGAGCAGAGACAGAGCGAGC +
Preference number: 2 (lower is better)
Translates to: AVSISINVSEFEQPLHSELDRAD*SRDRAS
Trigger: GCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAG...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCGGGCCCACAGGACAATaGTTTCCAAGGGCTAGTCCT +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGGPTGQ*FPRASP
Trigger: AGGACTAGCCCTTGGAAATCATTGTCCTGTGGGCCC...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR GCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGAAAGGGTCTACAATGTaGAGCTGTCTAAAAGAACAT +
Preference number: 2 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWKGSTM*SCLKEH
Trigger: ATGTTCTTTTAGACAGCTGCACATTGTAGACCCTTT...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCACATCTGGGCACCAGATaGTGGCTTCTGCTCAGTCCG +
Preference number: 2 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPHLGTR*WLLLSP
Trigger: CGGACTGAGCAGAAGCCACCATCTGGTGCCCAGATG...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR-3UTR CCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTAGGAAGAAAGGTGGTCTaGGAGCCTGTGGTGCCGATC +
Preference number: 2 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLGRKVV*EPVVPI
Trigger: GATCGGCACCACAGGCTCCCAGACCACCTTTCTTCC...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR-3UTR CCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCCAGGTTCTGATTTTCTaGATGCCAATCCTTTTCACC +
Preference number: 2 (lower is better)
Translates to: WNTFLRTWRIHILWEPISQVLIF*MPILFT
Trigger: GGTGAAAAGGATTGGCATCCAGAAAATCAGAACCTG...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR CAA 90 bp TGGTCAAAAGTTTCTAAATTGACAACTGAGCCAGCAAACCATACCTaGCCATCAGCACAGACACACAGTCACAGTGTGGAGAGTTCATCT +
Preference number: 2 (lower is better)
Translates to: WSKVSKLTTEPANHT*PSAQTHSHSVESSS
Trigger: AGATGAACTCTCCACACTGTGACTGTGTGTCTGTGCTGATGGCAAGGTATGGTTTGCTGGCTCAGTTGTCAATTTAGAAACTTTTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCGGGGGCTGTAAATCCTaGGTGGAAATGGAATCATTC +
Preference number: 2 (lower is better)
Translates to: ANTGSHCIATRFCINHSTGGCKS*VEMESF
Trigger: GAATGATTCCATTTCCACTCAGGATTTACAGCCCCC...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR GCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATTCTTCCAGCCCCATATaGCAACCGGGCACACTCTGG +
Preference number: 2 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHSSSPI*QPGTLW
Trigger: CCAGAGTGTGCCCGGTTGGCATATGGGGCTGGAAGA...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR-3UTR GCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTAATTTGAGCAGCCACTaGATTCTGAAGATGGAATAC +
Preference number: 2 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPNLSSH*ILKMEY
Trigger: GTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATT...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTCACACAGTCACAGTGTaGAGAGTTCATCTGTTTTTA +
Preference number: 2 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPHTVTV*RVHLFL
Trigger: TAAAAACAGATGAACTCTCCACACTGTGACTGTGTG...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGCTTGACATCTGCAAATaGAATTATGGTTGTTCTGTT +
Preference number: 2 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWLDICK*NYGCSV
Trigger: AACAGAACAACCATAATTCCATTTGCAGATGTCAAG...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCAGGATTATTGCACAGTaGGGCCCACAGGACAATGAT +
Preference number: 2 (lower is better)
Translates to: ANTGSHCIATRFCINHSTRIIAQ*GPQDND
Trigger: ATCATTGTCCTGTGGGCCCCACTGTGCAATAATCCT...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 90 bp AAAGGAGACTTGTGGACACTGTTCATTCTGGGTAAGATGCTCATTTaGGGTCCATCTTTCAGAAAGGTCTTTAATACTGGTTTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: KGDLWTLFILGKMLI*GPSFRKVFNTGLAL
Trigger: GAGGGCCAAACCAGTATTAAAGACCTTTCTGAAAGATGGACCCAAAATGAGCATCTTACCCAGAATGAACAGTGTCCACAAGTCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATATCAGGACTCTGTCCTaGAGAACGGGCGGGATGGTT +
Preference number: 2 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHIRTLS*RTGGMV
Trigger: AACCATCCCGCCCGTTCTTCAGGACAGAGTCCTGAT...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR-3UTR TCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTATATTCTTGGTCATGTaGAGCTTTTTGTTGTGCAAC +
Preference number: 2 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFIFLVM*SFLLCN
Trigger: GTTGCACAACAAAAAGCTTCACATGACCAAGAATAT...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCAGTTTGCTCAGAAGTCTaGTTGAGTGCATCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSVCSEV*LSASSS
Trigger: TGAGGAGGATGCACTCAATCAGACTTCTGAGCAAAC...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCAGGCCTGTCTGTTACTaGATTCTGTATGCCCTGACC +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGRPVCY*ILYALT
Trigger: GGTCAGGGCATACAGAATTCAGTAACAGACAGGCCT...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCTTTACCACTTTTCTCTaGTCTGGGGCCCACTCCAGC +
Preference number: 2 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFFTTFL*SGAHSS
Trigger: GCTGGAGTGGGCCCCAGACCAGAGAAAAGTGGTAAA...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCGGCATAGCTGGACTCTaGTCTGTTGGAGCATGGTCT +
Preference number: 2 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFGIAGL*SVGAWS
Trigger: AGACCATGCTCCAACAGACCAGAGTCCAGCTATGCC...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp ACTTGCATTGTAACTCCCCCACAATATCCCATCCAATGTAATAAGGATTCATGGACTGCCACAGAGACTTaGAGAGGAGTAATGGCCATA +
Preference number: 2 (lower is better)
Translates to: TCIVTPPQYPIQCNKDSWTATET*RGVMAI
Trigger: TATGGCCATTACTCCTCTCCAAGTCTCTGTGGCAGT...CCATGAATCCTTATTACATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 90 bp GTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGTTATTACTGTaGGCAACCAGAATTCACAGGGATTTGATGGTATTCTTAGAAGTT +
Preference number: 2 (lower is better)
Translates to: VKELSGKGAHYWLLL*ATRIHRDLMVFLEV
Trigger: AACTTCTAAGAATACCATCAAATCCCTGTGAATTCTGGTTGCCAACAGTAATAACCAGTAATGGGCACCTTTACCGGACAGCTCCTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGTCTGCTGAGGAAGCATaGTCAGAAAGATCTTGTAAA +
Preference number: 2 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKSAEEA*SERSCK
Trigger: TTTACAAGATCTTTCTGATCATGCTTCCTCAGCAGA...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR-3UTR GCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGTATGTTACACCTTTCTaGACAAGCTTGGCTCATGAT +
Preference number: 2 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKYVTPF*TSLAHD
Trigger: ATCATGAGCCAAGCTTGTGCAGAAAGGTGTAACATA...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR-3UTR GCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCATCTGGGAGCCTGTGGTaGCGATCACGAGTACATTTT +
Preference number: 2 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPSGSLW*RSRVHF
Trigger: AAAATGTACTCGTGATCGGCACCACAGGCTCCCAGA...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR-3UTR CCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCTGCATCGTACATCTTTaGTGTAGGGCAGGTGAAAGG +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGCIVHL*CRAGER
Trigger: CCTTTCACCTGCCCTACACCAAAGATGTACGATGCA...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 90 bp ATTATATATTCCACTTGGAACTGTTTCCCAAATATCCACACTGAATaGTGTGCCAAGGTTCGTTCTGCTTACATGGAAGGCCCTTTAGGA +
Preference number: 2 (lower is better)
Translates to: IIYSTWNCFPNIHTE*CAKVRSAYMEGPLG
Trigger: TCCTAAAGGGCCTTCCATGTAAGCAGAACGAACCTTGGCACACAATTCAGTGTGGATATTTGGGAAACAGTTCCAAGTGGAATATATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATAGGTTCAATGCGATCTaGGTCACTGGGCTTGATAGG +
Preference number: 2 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHRFNAI*VTGLDR
Trigger: CCTATCAAGCCCAGTGACTCAGATCGCATTGAACCT...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR-3UTR TCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGATCTGCTGAGGAAGCATaGTCAGAAAGATCTTGTAAA +
Preference number: 2 (lower is better)
Translates to: EFEQPLHSEDGILFFALGSAEEA*SERSCK
Trigger: TTTACAAGATCTTTCTGATCATGCTTCCTCAGCAGA...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR-3UTR GCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCTCATTCTGGGTAAGATaGTCATTTTGGGTCCATCTT +
Preference number: 2 (lower is better)
Translates to: ANTGSHCIATRFCINHSTSFWVR*SFWVHL
Trigger: AAGATGGACCCAAAATGAGCATCTTACCCAGAATGA...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR GCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCGCACCACGTTTCACTTaGATTGTAACTCCCCCACAA +
Preference number: 2 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFAPRFT*IVTPPQ
Trigger: TTGTGGGGGAGTTACAATGCAAGTGAAACGTGGTGC...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCAGAAGAACGGGCGGGATaGTTAAACCCATCTGAAGTT +
Preference number: 2 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPEERAG*LNPSEV
Trigger: AACTTCAGATGGGTTTAACCATCCCGCCCGTTCTTC...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR-3UTR CCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCTTTGGCCCTCAGCTATaGTTTCTGATTGACAGATTA +
Preference number: 2 (lower is better)
Translates to: ANTGSHCIATRFCINHSTFGPQL*FLIDRL
Trigger: TAATCTGTCAATCAGAAACCATAGCTGAGGGCCAAA...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCAATGAAAGGAGACTTGTaGACACTGTTCATTCTGGGT +
Preference number: 2 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSMKGDL*TLFILG
Trigger: ACCCAGAATGAACAGTGTCCACAAGTCTCCTTTCAT...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 90 bp TCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCAATGTTCTaGACATTGGCATTCTGCCTGCCTGTTGAATTAAGCAAAGTAACT +
Preference number: 2 (lower is better)
Translates to: SIKGLSKVRSNAPMF*TLAFCLPVELSKVT
Trigger: AGTTACTTTGCTTAATTCAACAGGCAGGCAGAATGCCAATGTCAAGAACATTGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR-3UTR TCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCAAGGGATTATCTAAAGTaGGATCCAATGCACCAATGT +
Preference number: 2 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSRDYLK*DPMHQC
Trigger: ACATTGGTGCATTGGATCTCACTTTAGATAATCCCT...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCTTCAGATGTATTTTCTaGAGCTGGTTTACTGCTAAC +
Preference number: 2 (lower is better)
Translates to: ANTGSHCIATRFCINHSTFRCIF*SWFTAN
Trigger: GTTAGCAGTAAACCAGCTTCAGAAAATACATCTGAA...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCAAGGTGCAGTGTAACTaGTTGGATGTTTTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGKVQCN*LDVLAE
Trigger: CTCAGCTAAAACATCCAATCAGTTACACTGCACCTT...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCCCTAAGTTCATTCAGTaGACTCCTAGTAACACCTAC +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGPKFIQ*TPSNTY
Trigger: GTAGGTGTTACTAGGAGTTCACTGAATGAACTTAGG...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR GCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATTCGATGGAACACTGGTaGCGTTTAAGCATGTCCAGT +
Preference number: 2 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHSMEHW*RLSMSS
Trigger: ACTGGACATGCTTAAACGGCACCAGTGTTCCATCGA...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR-3UTR CCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCATTTTCAGAGTTTAGCTaGAATTCAGCTGAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSFSEFS*NSAEAF
Trigger: GAAGGCTTCAGCTGAATTCCAGCTAAACTCTGAAAA...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCCAGGTTCTGATTTTCTaGATGCCAATCCTTTTCACC +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGQVLIF*MPILFT
Trigger: GGTGAAAAGGATTGGCATCCAGAAAATCAGAACCTG...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp ACTTGCATTGTAACTCCCCCACAATATCCCATCCAATGTAATAAGGATTCATGGTCTTTAATACTGGTTTaGCCCTCAGCTATGGTTTCT +
Preference number: 2 (lower is better)
Translates to: TCIVTPPQYPIQCNKDSWSLILV*PSAMVS
Trigger: AGAAACCATAGCTGAGGGCCAAACCAGTATTAAAGA...CCATGAATCCTTATTACATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCTGCGGTCAATATCTGTaGCAGGAAAAATCAATGGTG +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGCGQYL*QEKSMV
Trigger: CACCATTGATTTTTCCTGCCACAGATATTGACCGCA...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCAAAGGTGCCCATTACTaGTTATTACTGTTGGCAACC +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGKGAHY*LLLLAT
Trigger: GGTTGCCAACAGTAATAACCAGTAATGGGCACCTTT...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR GCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCAACATCTGTGGTTCATaGATCCTAGTAGATGTGACA +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGNICGS*ILVDVT
Trigger: TGTCACATCTACTAGGATGCATGAACCACAGATGTT...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCGCTATGGTTTCTGATTaGCAGATTACTTCTTCAGAT +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGAMVSD*QITSSD
Trigger: ATCTGAAGAAGTAATCTGTCAATCAGAAACCATAGC...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR GCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCTCTGGCTCAACATTCTaGTTGCAGGTTTCTATATAT +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGSGSTF*LQVSIY
Trigger: ATATATAGAAACCTGCAAGCAGAATGTTGAGCCAGA...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATTTTTCAGAGTTTAGCTaGAATTCAGCTGAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHFSEFS*NSAEAF
Trigger: GAAGGCTTCAGCTGAATTCCAGCTAAACTCTGAAAA...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR-3UTR CCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCGCTGTAAATCCTGAGTaGAAATGGAATCATTCAAAA +
Preference number: 2 (lower is better)
Translates to: VTIQKFYLYASALQHICGAVNPE*KWNHSK
Trigger: TTTTGAATGATTCCATTTCCACTCAGGATTTACAGC...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp GTGCTAGCCCAGATGGTCAGTATTCCGGAGCAGCCGTaGTCACAAAGGGATGTGAGGAGGATGCTGCCGCAC +
Preference number: 3 (lower is better)
Translates to: VLAQMVSIPEQP*SQRDVRRMLPH
Trigger: GTGCGGCAGCATCCTCCTCACATCCCTTTGTGAGCACGGCTGCTCCGGAATACTGACCATCTGGGCTAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp TCAGTATTCCGGAGCAGCCGTGCTCACAAAGGGATGTaGGGAGGATGCTGCCGCACACTCCATGTTTCTACC +
Preference number: 3 (lower is better)
Translates to: SVFRSSRAHKGM*GGCCRTLHVST
Trigger: GGTAGAAACATGGAGTGTGCGGCAGCATCCTCCTCACATCCCTTTGTGAGCACGGCTGCTCCGGAATACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp CTCACCACAGGTGGCAAACAGGTAGGAAAAGGCCATTaGAACGCCCTGCAGCTTTTCTGGCCGATGATTTGC +
Preference number: 3 (lower is better)
Translates to: LTTGGKQVGKGH*NALQLFWPMIC
Trigger: GCAAATCATCGGCCAGAAAAGCTGCAGGGCGTTGCAATGGCCTTTTCCTACCTGTTTGCCACCTGTGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 72 bp TGCCGCACACTCCATGTTTCTACCCTGCATGTGAGGTaGTCTGATGGATTGACTGACTGTCACTGGTGCATT +
Preference number: 3 (lower is better)
Translates to: CRTLHVSTLHVR*SDGLTDCHWCI
Trigger: AATGCACCAGTGACAGTCAGTCAATCCATCAGACCACCTCACATGCAGGGTAGAAACATGGAGTGTGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp GGTGAAGAAACAGAGACCGCCCTTGTAGTTAAGTGCTaGCCGCAGAACTGCCCACTACTGGTTATGGTAAAG +
Preference number: 3 (lower is better)
Translates to: GEETETALVVKC*PQNCPLLVMVK
Trigger: CTTTACCATAACCAGTAGTGGGCAGTTCTGCGGTCAGCACTTAACTACAAGGGCGGTCTCTGTTTCTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp AAGATGTGGGCTGCAAGGCAGAAGAGTTTTAACACATaGACTCGCCATCTCTCCAGCTTCCTTTGCCAAGCA +
Preference number: 3 (lower is better)
Translates to: KMWAARQKSFNT*TRHLSSFLCQA
Trigger: TGCTTGGCAAAGGAAGCTGGAGAGATGGCGAGTGCATGTGTTAAAACTCTTCTGCCTTGCAGCCCACATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp TGTCCACCAATCCCAGCCATCGCTGATTACATGTTCTaGTCTAGATTCCCGTTTTCACAAGTTGCACCCAGC +
Preference number: 3 (lower is better)
Translates to: CPPIPAIADYMF*SRFPFSQVAPS
Trigger: GCTGGGTGCAACTTGTGAAAACGGGAATCTAGAGCAGAACATGTAATCAGCGATGGCTGGGATTGGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CAA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTGTCTTTAATACTGGTTaGGCCCTCAGCTATGGTTTC +
Preference number: 3 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFVFNTG*ALSYGF
Trigger: GAAACCATAGCTGAGGGCCAAACCAGTATTAAAGAC...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp CTTTATGTGTTAATAGCTGAAGCCCAAACTGTGGGATaGAGGCTATTGGCTGTCTGGAGCCCTGAACAGGTA +
Preference number: 3 (lower is better)
Translates to: LYVLIAEAQTVG*RLLAVWSPEQV
Trigger: TACCTGTTCAGGGCTCCAGACAGCCAATAGCCTTCATCCCACAGTTTGGGCTTCAGCTATTAACACATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp TGCTCTAGATTCCCGTTTTCACAAGTTGCACCCAGCTaGTTTAAAATAGCACATCCTGCAGAACCCTCTGCT +
Preference number: 3 (lower is better)
Translates to: CSRFPFSQVAPS*FKIAHPAEPSA
Trigger: AGCAGAGGGTTCTGCAGGATGTGCTATTTTAAAGCAGCTGGGTGCAACTTGTGAAAACGGGAATCTAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp ATTTCCACTGCCACAAAGGACACTCTCCAAATAGACTaGCCGTTCCAAGCACCAAGATTAACCAGTGACAAG +
Preference number: 3 (lower is better)
Translates to: ISTATKDTLQID*PFQAPRLTSDK
Trigger: CTTGTCACTGGTTAATCTTGGTGCTTGGAACGGTCAGTCTATTTGGAGAGTGTCCTTTGTGGCAGTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 72 bp CCCCCACAATATCCCATCCAATGTAATAAGGATTCATaGCAATCCATGCAGCAGCCTGTGATGCACAAAGTA +
Preference number: 3 (lower is better)
Translates to: PPQYPIQCNKDS*QSMQQPVMHKV
Trigger: TACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCCTTATTACATTGGATGGGATATTGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 72 bp ATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTaGTTATTACTGTTGGCAACCAGAATTCACAGGGAT +
Preference number: 3 (lower is better)
Translates to: MVKELSGKGAHY*LLLLATRIHRD
Trigger: ATCCCTGTGAATTCTGGTTGCCAACAGTAATAACCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CAA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGACCTTTCTGCACAAGCTaGGCTCATGATAGTCATCTG +
Preference number: 3 (lower is better)
Translates to: EFEQPLHSEDGILFFALGPFCTS*AHDSHL
Trigger: CAGATGACTATCATGAGCCAAGCTTGTGCAGAAAGG...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR-3UTR CAA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCTGGAGTTTCACCATGTaGGCCAGGCCTGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: VTIQKFYLYASALQHICGWSFTM*ARPVSN
Trigger: GTTTGAGACAGGCCTGGCCAACATGGTGAAACTCCA...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp CTTCCTTATCGGTTGACAGGCCATCACCTAGACTCCTaGAGTTTACATTTTCTACAGCTTCTCTTCCAGTGT +
Preference number: 3 (lower is better)
Translates to: LPYRLTGHHLDS*SLHFLQLLFQC
Trigger: ACACTGGAAGAGAAGCTGTAGAAAATGTAAACTTCAGGAGTCTAGGTGATGGCCTGTCAACCGATAAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp CCTAGCTGCAACTGGTTATCTTTATGTGTTAATAGCTaGAGCCCAAACTGTGGGATGAAGGCTATTGGCTGT +
Preference number: 3 (lower is better)
Translates to: PSCNWLSLCVNS*SPNCGMKAIGC
Trigger: ACAGCCAATAGCCTTCATCCCACAGTTTGGGCTTCAGCTATTAACACATAAAGATAACCAGTTGCAGCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CAA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCATCTGAGTCACTGGGCTaGATAGGGCAGACTGAAGCA +
Preference number: 3 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPSESLG*IGQTEA
Trigger: TGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR TCA 72 bp TCTGAAGCTGGTTTACTGCTAACAACCAAAAGTTCATaGAGTTCTTTCAAGGCTGCCGTTATAGACGGGCAA +
Preference number: 3 (lower is better)
Translates to: SEAGLLLTTKSS*SSFKAAVIDGQ
Trigger: TTGCCCGTCTATAACGGCAGCCTTGAAAGAACTTCATGAACTTTTGGTTGTTAGCAGTAAACCAGCTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR TCA 72 bp AGTATTTCACTCAGATCACAGCTCACACTGAGCGTTTaGAGAACTTCCTGGCAGAAGAGTCTAGAAAGGAAA +
Preference number: 3 (lower is better)
Translates to: SISLRSQLTLSV*RTSWQKSLERK
Trigger: TTTCCTTTCTAGACTCTTCTGCCAGGAAGTTCTTCAAACGCTCAGTGTGAGCTGTGATCTGAGTGAAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp GTTCTTTTAAGAATCTGGGTAGCACCACGTTTCACTTaGATTGTAACTCCCCCACAATATCCCATCCAATGT +
Preference number: 3 (lower is better)
Translates to: VLLRIWVAPRFT*IVTPPQYPIQC
Trigger: ACATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGTGAAACGTGGTGCTACCCAGATTCTTAAAAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp CAAACCACCACCCATAAAGCAAATACAGGGTCCCATTaGATTGCTACTAGATTTTGCATCAATCATAGCACC +
Preference number: 3 (lower is better)
Translates to: QTTTHKANTGSH*IATRFCINHST
Trigger: GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGCTTTATGGGTGGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp GCATCTGATTCCATTGTAAGCCTGATTTTCCCAGTCTaGTCTGAAGTGGAACCAGGTAACTCTAATATGACT +
Preference number: 3 (lower is better)
Translates to: ASDSIVSLIFPV*SEVEPGNSNMT
Trigger: AGTCATATTAGAGTTACCTGGTTCCACTTCAGAGCAGACTGGGAAAATCAGGCTTACAATGGAATCAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CAA 90 bp ACTTGCATTGTAACTCCCCCACAATATCCCATCCAATGTAATAAGGATTCATGGAATGCACCAATGTTCTaGACATTGGCATTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: TCIVTPPQYPIQCNKDSWNAPMF*TLAFCL
Trigger: CAGGCAGAATGCCAATGTCAAGAACATTGGTGCATT...CCATGAATCCTTATTACATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp ATATTCCACTTGGAACTGTTTCCCAAATATCCACACTaGATTGTGTGCCAAGGTTCGTTCTGCTTACATGGA +
Preference number: 3 (lower is better)
Translates to: IFHLELFPKYPH*IVCQGSFCLHG
Trigger: TCCATGTAAGCAGAACGAACCTTGGCACACAATTCAGTGTGGATATTTGGGAAACAGTTCCAAGTGGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp AAGGCCATTGCAACGCCCTGCAGCTTTTCTGGCCGATaGTTTGCAAGGCTGTTTGCTATATATATATATATT +
Preference number: 3 (lower is better)
Translates to: KAIATPCSFSGR*FARLFAIYIYI
Trigger: AATATATATATATATAGCAAACAGCCTTGCAAATCATCGGCCAGAAAAGCTGCAGGGCGTTGCAATGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp CCAAACACCAAATTATGTGGTCAAAAGTTTCTAAATTaGCAACTGAGCCAGCAAACCATACCTTGCCATCAG +
Preference number: 3 (lower is better)
Translates to: PNTKLCGQKFLN*QLSQQTIPCHQ
Trigger: CTGATGGCAAGGTATGGTTTGCTGGCTCAGTTGTCAATTTAGAAACTTTTGACCACATAATTTGGTGTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 72 bp TGTGGACACTGTTCATTCTGGGTAAGATGCTCATTTTaGGTCCATCTTTCAGAAAGGTCTTTAATACTGGTT +
Preference number: 3 (lower is better)
Translates to: CGHCSFWVRCSF*VHLSERSLILV
Trigger: AACCAGTATTAAAGACCTTTCTGAAAGATGGACCCAAAATGAGCATCTTACCCAGAATGAACAGTGTCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CAA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCTTTGTGTTGATTCTGTaGCCTTTCTTCAGGAAGCTC +
Preference number: 3 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFFVLIL*PFFRKL
Trigger: GAGCTTCCTGAAGAAAGGCAACAGAATCAACACAAA...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 72 bp AAATGGAATTATGGTTGTTCTGTTCTTTTAAGAATCTaGGTAGCACCACGTTTCACTTGCATTGTAACTCCC +
Preference number: 3 (lower is better)
Translates to: KWNYGCSVLLRI*VAPRFTCIVTP
Trigger: GGGAGTTACAATGCAAGTGAAACGTGGTGCTACCCAGATTCTTAAAAGAACAGAACAACCATAATTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR-3UTR CAA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCTCAAAAGTTTCTAAATaGACAACTGAGCCAGCAAAC +
Preference number: 3 (lower is better)
Translates to: VTIQKFYLYASALQHICGSKVSK*TTEPAN
Trigger: GTTTGCTGGCTCAGTTGTCAATTTAGAAACTTTTGA...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp CTGCAGCTTTTCTGGCCGATGATTTGCAAGGCTGTTTaGTATATATATATATATTTATATATGTGGCGGGAT +
Preference number: 3 (lower is better)
Translates to: LQLFWPMICKAV*YIYIYLYMWRD
Trigger: ATCCCGCCACATATATAAATATATATATATATAGCAAACAGCCTTGCAAATCATCGGCCAGAAAAGCTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp CATTGCAACGCCCTGCAGCTTTTCTGGCCGATGATTTaGAAGGCTGTTTGCTATATATATATATATTTATAT +
Preference number: 3 (lower is better)
Translates to: HCNALQLFWPMI*KAVCYIYIYLY
Trigger: ATATAAATATATATATATATAGCAAACAGCCTTGCAAATCATCGGCCAGAAAAGCTGCAGGGCGTTGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp GTAACACCTACTGAGGAATCACTAAGGTATAAAACTTaGACCATGATTTTACATTTCCAGTTCTCAAGGACA +
Preference number: 3 (lower is better)
Translates to: VTPTEESLRYKT*TMILHFQFSRT
Trigger: TGTCCTTGAGAACTGGAAATGTAAAATCATGGTTCAAGTTTTATACCTTAGTGATTCCTCAGTAGGTGTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp GAGTCAGACTTCAGACAAAATCATTTAACACTAAGTTaGGAAATCACTCTTTCGAAGCTTCTGTTTCAAACA +
Preference number: 3 (lower is better)
Translates to: ESDFRQNHLTLS*EITLSKLLFQT
Trigger: TGTTTGAAACAGAAGCTTCGAAAGAGTGATTTCTCAACTTAGTGTTAAATGATTTTGTCTGAAGTCTGACTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR TCA 72 bp CTCTCCTCCAGCATTGTAAATGGATTTCTCAATAACTaGTCTCCTCAGGCATTTATACATGTTACATATTTT +
Preference number: 3 (lower is better)
Translates to: LSSSIVNGFLNN*SPQAFIHVTYF
Trigger: AAAATATGTAACATGTATAAATGCCTGAGGAGATCAGTTATTGAGAAATCCATTTACAATGCTGGAGGAGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR GCA 72 bp GTCACTAGTAGTTACGATCCAGAAATTCTACCTGTATaGTTCAGCATTACAACATATATGTGGCATTTAAAA +
Preference number: 3 (lower is better)
Translates to: VTSSYDPEILPV*FSITTYMWHLK
Trigger: TTTTAAATGCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAACTACTAGTGAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CCA 72 bp CATTATTTTTCCCTCACAGTTCTTGACATCTGCAAATaGAATTATGGTTGTTCTGTTCTTTTAAGAATCTGG +
Preference number: 3 (lower is better)
Translates to: HYFSLTVLDICK*NYGCSVLLRIW
Trigger: CCAGATTCTTAAAAGAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAATAATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp CTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCCTCCGGGCTCGGTCCTaGTGCTGCTCCACCAGGACT +
Preference number: 4 (lower is better)
Translates to: LVPFKHVQSQKHVHGLFLLRARS*CCSTRT
Trigger: AGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAG...GAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR GCA 90 bp TCTCCTCTGGCCGTACATCCTCTCTTCCAGCCCCATATGCCAACCGGGCACACTGCTCGGTCCTGCTGCTaGTCCACCAGGACTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SPLAVHPLFQPHMPTGHTARSCC*STRTLE
Trigger: TTCTAGAGTCCTGGTGGAGCAGCAGCAGGACCGAGC...AGTGTGCCCGGTTGGCATATGGGGCTGGAAGAGAGGATGTACGGCCAGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR GCA 90 bp CTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCCGGGCTCGGTCCTGCTaGTGCTCCACCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: LVPFKHVQSQKHVHGLFLRARSC*CSTRTL
Trigger: TAGAGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCG...GAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR GCA 90 bp TCCTCTGGCCGTACATCCTCTCTTCCAGCCCCATATGCCAACCGGGCACACTCTTCTTCCAGCCCCATATaGCAACCGGGCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: SSGRTSSLPAPYANRAHSSSSPI*QPGTLW
Trigger: CCAGAGTGTGCCCGGTTGGCATATGGGGCTGGAAGA...AGAGTGTGCCCGGTTGGCATATGGGGCTGGAAGAGAGGATGTACGGCCAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR GCA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGACCTGGTGGCTGGCGCTaGCGGGGACTTGATGTGCCA +
Preference number: 4 (lower is better)
Translates to: SESLGLIGQTEAETERARPGGWR*RGLDVP
Trigger: TGGCACATCAAGTCCCCGGCAGCGCCAGCCACCAGG...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp CGGGCACACTCTGGTAGCTCTCCCTCAGGAAGAAAGGTGGTCTGGGAGCCTGTGTGGTCTGGGAGCCTGTaGTGCCGATCACGAGTACAT +
Preference number: 4 (lower is better)
Translates to: RAHSGSSPSGRKVVWEPVWSGSL*CRSRVH
Trigger: ATGTACTCGTGATCGGCACCACAGGCTCCCAGACCA...CACAGGCTCCCAGACCACCTTTCTTCCTGAGGGAGAGCTACCAGAGTGTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp TCTCCTCTGGCCGTACATCCTCTCTTCCAGCCCCATATGCCAACCGGGCACACTGACTCCACAGAAGGCTaGCAACTGCCACAGAGACTT +
Preference number: 4 (lower is better)
Translates to: SPLAVHPLFQPHMPTGHTDSTEG*QLPQRL
Trigger: AAGTCTCTGTGGCAGTTGTCAGCCTTCTGTGGAGTC...AGTGTGCCCGGTTGGCATATGGGGCTGGAAGAGAGGATGTACGGCCAGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR GCA 90 bp TGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGTCGGGCTCGGTCCTGCTaGTGCTCCACCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: CRLSMSSPRSMSMGCSSSRARSC*CSTRTL
Trigger: TAGAGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCG...ACTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR TCA 90 bp GTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGTCTCAAGGTCTCCACTaGGCAGAGCTTCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VPFKHVQSQKHVHGLFLKSQGLH*AELLPG
Trigger: CCCTGGCAGAAGCTCTGCTCAGTGGAGACCTTGAGA...CTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR TCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGAACTCCTGCCCTCAGGTaGTCCACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGTPALR*STRLGL
Trigger: GAGGCCAAGGCGGGTGGATCACCTGAGGGCAGGAGT...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGGCTCGGTCCTGCTGCTaGTCCACCAGGACTCTAGAA +
Preference number: 4 (lower is better)
Translates to: VPFKHVQSQKHVHGLFLKARSCC*STRTLE
Trigger: TTCTAGAGTCCTGGTGGAGCAGCAGCAGGACCGAGC...CTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR GCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCCTCCGGGCTCGGTCCTaGTGCTGCTCCACCAGGACT +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISLRARS*CCSTRT
Trigger: AGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAG...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp CTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAGACGAATCCTTTCTTaGTCTCTCCGGGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LVPFKHVQSQKHVHGLFLRRILS*SLRARS
Trigger: GGACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCT...GAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR CCA 90 bp GTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGGGAAGAAAGGTGGTCTaGGAGCCTGTGGTGCCGATC +
Preference number: 4 (lower is better)
Translates to: VPFKHVQSQKHVHGLFLKGRKVV*EPVVPI
Trigger: GATCGGCACCACAGGCTCCCAGACCACCTTTCTTCC...CTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR CCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGTGTGTTCCTGGTGGCTaGCGCTGCCGGGGACTTGAT +
Preference number: 4 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWCVPGG*RCRGLD
Trigger: ATCAAGTCCCCGGCAGCGCCAGCCACCAGGAACACA...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCCTGCTGTGTTCCTGGTaGCTGGCGCTGCCGGGGACT +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISLLCSW*LALPGT
Trigger: AGTCCCCGGCAGCGCCAGCCACCAGGAACACAGCAG...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TTCTTGGTCTGCAATCTCCTCTGGCCGTACATCCTCTCTTCCAGCCCCATATGCCTTGATAGGGCAGACTaGAGCAGAGACAGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: FLVCNLLWPYILSSSPICLDRAD*SRDRAS
Trigger: GCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAG...GCATATGGGGCTGGAAGAGAGGATGTACGGCCAGAGGAGATTGCAGACCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGAGGGCCCACAGGACAATaGTTTCCAAGGGCTAGTCCT +
Preference number: 4 (lower is better)
Translates to: SESLGLIGQTEAETERARGPTGQ*FPRASP
Trigger: AGGACTAGCCCTTGGAAATCATTGTCCTGTGGGCCC...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp CTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAGCAAGGACAGCTCATaGGGGTTGGCCAGCAACATA +
Preference number: 4 (lower is better)
Translates to: LVPFKHVQSQKHVHGLFLSKDSS*GLASNI
Trigger: TATGTTGCTGGCCAACCCGCATGAGCTGTCCTTGCT...GAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR GCA 90 bp GGCACCAGATGGTGGCTTCTGCTCAGTCCGGGGGTCATTTATCTAAAGCTGTGTCTGCCAGGGGTGGATTaGGTTCCTTCAGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: GTRWWLLLSPGVIYLKLCLPGVD*VPSART
Trigger: TGTCCTTGCTGAAGGAACGCAATCCACCCCTGGCAG...ACACAGCTTTAGATAAATGACCCCCGGACTGAGCAGAAGCCACCATCTGGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR GCA 90 bp GTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGACTGAGCAGAGCTTCTaGCAGGGGTGGATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: VPFKHVQSQKHVHGLFLKTEQSF*QGWIAF
Trigger: GAACGCAATCCACCCCTGGCAGAAGCTCTGCTCAGT...CTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR GCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCCGGGCTCGGTCCTGCTaGTGCTCCACCAGGACTCTA +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISRARSC*CSTRTL
Trigger: TAGAGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCG...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGAAGACGAATCCTTTCTTaGTCTCTCCGGGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SESLGLIGQTEAETERARRRILS*SLRARS
Trigger: GGACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCT...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGACCAGATGGTGGCTTCTaGTCAGTCCGGGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: SESLGLIGQTEAETERARPDGGF*SVRGSF
Trigger: AAATGACCCCCGGACTGAGCAGAAGCCACCATCTGG...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR GCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTTCTCGGCTGCGGGGATaGCAGACTCGAGCTCGCACA +
Preference number: 4 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFSRLRG*QTRART
Trigger: TGTGCGAGCTCGAGTCTGGCATCCCCGCAGCCGAGA...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGAGATCTGGCTCTCGGCTaGGGGGATGCCAGACTCGAG +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGDLALG*GDARLE
Trigger: CTCGAGTCTGGCATCCCCGCAGCCGAGAGCCAGATC...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGTCATCTGGGCACCAGATaGTGGCTTCTGCTCAGTCCG +
Preference number: 4 (lower is better)
Translates to: CRLSMSSPRSMSMGCSSSHLGTR*WLLLSP
Trigger: CGGACTGAGCAGAAGCCACCATCTGGTGCCCAGATG...ACTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
3UTR CAA 72 bp CCTCACCACAGGTGGCAAACAGGTAGGAAAAGGCCATaGCAACGCCCTGCAGCTTTTCTGGCCGATGATTTG +
Preference number: 4 (lower is better)
Translates to: PHHRWQTGRKRP*QRPAAFLADDL
Trigger: CAAATCATCGGCCAGAAAAGCTGCAGGGCGTTGCAATGGCCTTTTCCTACCTGTTTGCCACCTGTGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TTTCTTCAGGTCGATGGAACACTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGTCTCAAGGTCTCCACTaGGCAGAGCTTCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FLQVDGTLVPFKHVQSQKSQGLH*AELLPG
Trigger: CCCTGGCAGAAGCTCTGCTCAGTGGAGACCTTGAGA...CTTCTGGGACTGGACATGCTTAAACGGCACCAGTGTTCCATCGACCTGAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp CGGGCACACTCTGGTAGCTCTCCCTCAGGAAGAAAGGTGGTCTGGGAGCCTGTGGTAACTAGGGACTGTTaGGCTGTATCGATTTCCATA +
Preference number: 4 (lower is better)
Translates to: RAHSGSSPSGRKVVWEPVVTRDC*AVSISI
Trigger: TATGGAAATCGATACAGCTCAACAGTCCCTAGTTAC...CACAGGCTCCCAGACCACCTTTCTTCCTGAGGGAGAGCTACCAGAGTGTGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR GCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGTTGCCCAGGCTGGAGTaGAATGGCGTGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWLPRLE*NGVISA
Trigger: AGCAGAGATCACGCCATTGCACTCCAGCCTGGGCAA...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGACAGCTCATGCGGGTTaGCCAGCAACATATCTCGGA +
Preference number: 4 (lower is better)
Translates to: VPFKHVQSQKHVHGLFLKTAHAG*PATYLG
Trigger: TCCGAGATATGTTGCTGGCCAACCCGCATGAGCTGT...CTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR CCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCGGACTGCTGTGTTCCTaGTGGCTGGCGCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ANTGSHCIATRFCINHSTGLLCS*WLALPG
Trigger: CCCCGGCAGCGCCAGCCACCAGGAACACAGCAGTCC...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGATGGGATGAAGGCTATTaGCTGTCTGGAGCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: SESLGLIGQTEAETERARWDEGY*LSGALN
Trigger: GTTCAGGGCTCCAGACAGCCAATAGCCTTCATCCCA...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGCAGGCTGGAGTGCAATaGCGTGATCTCTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWQAGVQ*RDLCSP
Trigger: TGGTGAGCAGAGATCACGCCATTGCACTCCAGCCTG...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TTCTTGGTCTGCAATCTCCTCTGGCCGTACATCCTCTCTTCCAGCCCCATATGCAGGTTCAATGCGATCTaGGTCACTGGGCTTGATAGG +
Preference number: 4 (lower is better)
Translates to: FLVCNLLWPYILSSSPICRFNAI*VTGLDR
Trigger: CCTATCAAGCCCAGTGACTCAGATCGCATTGAACCT...GCATATGGGGCTGGAAGAGAGGATGTACGGCCAGAGGAGATTGCAGACCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp TCCTCTGGCCGTACATCCTCTCTTCCAGCCCCATATGCCAACCGGGCACACTCTGCAGCCACTGCATTCTaGAGATGGAATACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SSGRTSSLPAPYANRAHSAATAF*RWNTFL
Trigger: AAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGC...AGAGTGTGCCCGGTTGGCATATGGGGCTGGAAGAGAGGATGTACGGCCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGGCGCTGCCGGGGACTTaGTGTGCCAGGCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKALPGT*CARHSY
Trigger: ATAGCTGTGCCTGGCACATCAAGTCCCCGGCAGCGC...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp TTTCTTCAGGTCGATGGAACACTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGGGGGCCCACTCCAGCTaGAGTACACACACACTACAT +
Preference number: 4 (lower is better)
Translates to: FLQVDGTLVPFKHVQSQKGAHSS*STHTLH
Trigger: ATGTAGTGTGTGTGTACTGCAGCTGGAGTGGGCCCC...CTTCTGGGACTGGACATGCTTAAACGGCACCAGTGTTCCATCGACCTGAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR CCA 90 bp GGCACCAGATGGTGGCTTCTGCTCAGTCCGGGGGTCATTTATCTAAAGCTGTGTCTCATGATAGTCATCTaGGCACCAGATGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GTRWWLLLSPGVIYLKLCLMIVI*APDGGF
Trigger: GAAGCCACCATCTGGTGCCCAGATGACTATCATGAG...ACACAGCTTTAGATAAATGACCCCCGGACTGAGCAGAAGCCACCATCTGGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR CCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAGTCGGCGTCGACCTaGAGGGAAAAGGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFKSAST*REKVTS
Trigger: CGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTT...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGAGTTTCCCGAGTAGCTaGGACTACAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWSFPSS*DYRHVP
Trigger: TGGCACATGCCTGTAGTCCCAGCTACTCGGGAAACT...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp CTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCGGATTGTCCAAGCCCTaGGGAGATGAAGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: LVPFKHVQSQKHVHGLFLGLSKP*GDEVIS
Trigger: AGAAATAACTTCATCTCCTCAGGGCTTGGACAATCC...GAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR TCA 90 bp GGGCACCAGATGGTGGCTTCTGCTCAGTCCGGGGGTCATTTATCTAAAGCTGTGTCTTCTATCTTTGCCTaGGCTTCAAGGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GHQMVASAQSGGHLSKAVSSIFA*ASRSKG
Trigger: TCCCTTTGACCTTGAAGCTCAGGCAAAGATAGAAGA...CACAGCTTTAGATAAATGACCCCCGGACTGAGCAGAAGCCACCATCTGGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCCTTGATAGGGCAGACTaGAGCAGAGACAGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISLDRAD*SRDRAS
Trigger: GCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAG...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp CGGGCACACTCTGGTAGCTCTCCCTCAGGAAGAAAGGTGGTCTGGGAGCCTGTGGCTATGGTTTCTGATTaGCAGATTACTTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RAHSGSSPSGRKVVWEPVAMVSD*QITSSD
Trigger: ATCTGAAGAAGTAATCTGTCAATCAGAAACCATAGC...CACAGGCTCCCAGACCACCTTTCTTCCTGAGGGAGAGCTACCAGAGTGTGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTTTAAGCCCCAGAGTTTaGGTCCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFLSPRV*VQPGQH
Trigger: GTGTTGCCCAGGCTGGACTCAAACTCTGGGGCTTAA...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp TTTCTTCAGGTCGATGGAACACTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGAGCAAGGACAGCTCATaGGGGTTGGCCAGCAACATA +
Preference number: 4 (lower is better)
Translates to: FLQVDGTLVPFKHVQSQKSKDSS*GLASNI
Trigger: TATGTTGCTGGCCAACCCGCATGAGCTGTCCTTGCT...CTTCTGGGACTGGACATGCTTAAACGGCACCAGTGTTCCATCGACCTGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR GCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCACTCCGGGCTCGGTCCTaGTGCTGCTCCACCAGGACT +
Preference number: 4 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSLRARS*CCSTRT
Trigger: AGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAG...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGATCGATGGAACACTGGTaGCGTTTAAGCATGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SESLGLIGQTEAETERARSMEHW*RLSMSS
Trigger: ACTGGACATGCTTAAACGGCACCAGTGTTCCATCGA...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTTGGTCTGGGAGCCTGTaGTGCCGATCACGAGTACAT +
Preference number: 4 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFWSGSL*CRSRVH
Trigger: ATGTACTCGTGATCGGCACCACAGGCTCCCAGACCA...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGAACACTACATGCATCATaGCTTCTGACGCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: SESLGLIGQTEAETERARTLHAS*LLTLCI
Trigger: GATGCAGAGCGTCAGAAGCCATGATGCATGTAGTGT...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CCA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGATGCATCGTACATCTTTaGTGTAGGGCAGGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: SESLGLIGQTEAETERARCIVHL*CRAGER
Trigger: CCTTTCACCTGCCCTACACCAAAGATGTACGATGCA...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 72 bp ACAGCTTTAGGTTCAATGCGATCTGAGTCACTGGGCTaGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: TALGSMRSESLG*IGQTEAETERA
Trigger: TGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGATCGCATTGAACCTAAAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp GTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGTCTTCTATCTTTGCCTaGGCTTCAAGGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: VPFKHVQSQKHVHGLFLKSSIFA*ASRSKG
Trigger: TCCCTTTGACCTTGAAGCTCAGGCAAAGATAGAAGA...CTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR TCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTAGCACACAGTACACGGTaGGCAGCATGGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLAHSTR*AAWPGP
Trigger: GGGCCCGGGCCATGCTGCTCACCGTGTACTGTGTGC...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTGTCTCCCTTCTAGACTaGAAGCTTCACAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPVSLLD*KLHKGR
Trigger: CCTGCCCTTGTGAAGCTTTCAGTCTAGAAGGGAGAC...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTGGTGGTCTGATGGATTaGCTGACTGTCACTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPGGLMD*LTVTGA
Trigger: TGCACCAGTGACAGTCAGTCAATCCATCAGACCACC...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCAAGCGCGCGGAAGTTGTaGAGCTCGAAGTCGGCGTCG +
Preference number: 4 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSSARKL*SSKSAS
Trigger: CGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCT...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCGTGATCCCGGCTCACTaGAACCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGVIPAH*NLRLPG
Trigger: ACCCGGGAGGCGGAGGTTGCAGTGAGCCGGGATCAC...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGCTTTCTGCACAAGCTTaGCTCATGATAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: VPFKHVQSQKHVHGLFLKLSAQA*LMIVIW
Trigger: CCAGATGACTATCATGAGCCAAGCTTGTGCAGAAAG...CTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR CCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGATTTACCACTTTTCTCTaGTCTGGGGCCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGFTTFL*SGAHSS
Trigger: GCTGGAGTGGGCCCCAGACCAGAGAAAAGTGGTAAA...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGAGGATTATTGCACAGTaGGGCCCACAGGACAATGAT +
Preference number: 4 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWRIIAQ*GPQDND
Trigger: ATCATTGTCCTGTGGGCCCCACTGTGCAATAATCCT...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCCACCCTCACCACAGGTaGCAAACAGGTAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISHPHHR*QTGRKR
Trigger: CCTTTTCCTACCTGTTTGCCACCTGTGGTGAGGGTG...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGAGAGTTCACCTGTGCCTaGCACACAGGCACTCAGTAT +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGEFTCA*HTGTQY
Trigger: ATACTGAGTGCCTGTGTGCCAGGCACAGGTGAACTC...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGAAGGTTTCATCATATTaGCCAGGCTGGTCTCGACCT +
Preference number: 4 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWKVSSY*PGWSRP
Trigger: AGGTCGAGACCAGCCTGGCCAATATGATGAAACCTT...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGTGGATTGTCCAAGCCCTaGGGAGATGAAGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: CRLSMSSPRSMSMGCSSSGLSKP*GDEVIS
Trigger: AGAAATAACTTCATCTCCTCAGGGCTTGGACAATCC...ACTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR TCA 90 bp GGCACCAGATGGTGGCTTCTGCTCAGTCCGGGGGTCATTTATCTAAAGCTGTGTTCCTCTGCTGATTTTTaGAGGGCTTCTGCTAATTCT +
Preference number: 4 (lower is better)
Translates to: GTRWWLLLSPGVIYLKLCSSADF*RASANS
Trigger: AGAATTAGCAGAAGCCCTTCAAAAATCAGCAGAGGA...ACACAGCTTTAGATAAATGACCCCCGGACTGAGCAGAAGCCACCATCTGGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGAAGGTTCAATGCGATCTaGGTCACTGGGCTTGATAGG +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGRFNAI*VTGLDR
Trigger: CCTATCAAGCCCAGTGACTCAGATCGCATTGAACCT...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp TTTCTTCAGGTCGATGGAACACTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGGGGGGCTGTAAATCCTaGGTGGAAATGGAATCATTC +
Preference number: 4 (lower is better)
Translates to: FLQVDGTLVPFKHVQSQKGGCKS*VEMESF
Trigger: GAATGATTCCATTTCCACTCAGGATTTACAGCCCCC...CTTCTGGGACTGGACATGCTTAAACGGCACCAGTGTTCCATCGACCTGAAGAAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGAAGGCCTGTCTGTTACTaGATTCTGTATGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGRPVCY*ILYALT
Trigger: GGTCAGGGCATACAGAATTCAGTAACAGACAGGCCT...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAGCTCGGTCCTGCTGCTaGTCCACCAGGACTCTAGAA +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGARSCC*STRTLE
Trigger: TTCTAGAGTCCTGGTGGAGCAGCAGCAGGACCGAGC...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp CTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCTATGTTACACCTTTCTaGACAAGCTTGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: LVPFKHVQSQKHVHGLFLYVTPF*TSLAHD
Trigger: ATCATGAGCCAAGCTTGTGCAGAAAGGTGTAACATA...GAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR GCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTGTAGGAAAAGGCCATTaGAACGCCCTGCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPVGKGH*NALQLF
Trigger: GAAAAGCTGCAGGGCGTTGCAATGGCCTTTTCCTAC...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAGAGGACCACTCTGTGTaGCCTCCATCTCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGEDHSV*PPSPGE
Trigger: CTCTCCTGGAGATGGAGGGCACACAGAGTGGTCCTC...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGACTGTTTTTAGCTGGATaGGTAGTGGGATTTCTCATG +
Preference number: 4 (lower is better)
Translates to: SESLGLIGQTEAETERARLFLAG*VVGFLM
Trigger: CATGAGAAATCCCACTACCCATCCAGCTAAAAACAG...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGCACACTGGAGTGCAGTaGCGTGATCTAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKHTGVQ*RDLGSL
Trigger: CAGTGAGCCTAGATCACGCCACTGCACTCCAGTGTG...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGGTTGCACTTCTTTCCTaGCCATCCCCTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKVALLS*PSPLLQ
Trigger: CTGGAGGAGAGGGGATGGCCAGGAAAGAAGTGCAAC...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCATCTCAAGGTCTCCACTaGGCAGAGCTTCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSSQGLH*AELLPG
Trigger: CCCTGGCAGAAGCTCTGCTCAGTGGAGACCTTGAGA...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGGCAGCCACTGCATTCTaGAGATGGAATACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWAATAF*RWNTFL
Trigger: AAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGC...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGAATGCACCAATGTTCTTaGCATTGGCATTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGMHQCS*HWHSAC
Trigger: GCAGGCAGAATGCCAATGTCAAGAACATTGGTGCAT...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTATGCACCAATGTTCTTaGCATTGGCATTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPMHQCS*HWHSAC
Trigger: GCAGGCAGAATGCCAATGTCAAGAACATTGGTGCAT...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGAGGGGGCTGTAAATCCTaGGTGGAAATGGAATCATTC +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGGGCKS*VEMESF
Trigger: GAATGATTCCATTTCCACTCAGGATTTACAGCCCCC...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGGACTCCACAGAAGGCTaGCAACTGCCACAGAGACTT +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKDSTEG*QLPQRL
Trigger: AAGTCTCTGTGGCAGTTGTCAGCCTTCTGTGGAGTC...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCACTCACACACGCTCAGTaGGTCACTCCCTCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPLTHAQ*VTPSRP
Trigger: AGGGCGGGAGGGAGTGACTCACTGAGCGTGTGTGAG...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGAGTTTGCTCAGAAGTCTaGTTGAGTGCATCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGVCSEV*LSASSS
Trigger: TGAGGAGGATGCACTCAATCAGACTTCTGAGCAAAC...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCGATCACAGCTCACACTaGGCGTTTGAAGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISDHSSH*AFEELP
Trigger: AGGAAGTTCTTCAAACGCTCAGTGTGAGCTGTGATC...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCCCCAAATATCCACACTaGATTGTGTGCCAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISPKYPH*IVCQGS
Trigger: CGAACCTTGGCACACAATTCAGTGTGGATATTTGGG...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAGCCCAAACTGTGGGATaGAGGCTATTGGCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGAQTVG*RLLAVW
Trigger: CCAGACAGCCAATAGCCTTCATCCCACAGTTTGGGC...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCCAGGCTGGAGTACAGTaGCGTGATCCCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGQAGVQ*RDPGSL
Trigger: CAGTGAGCCGGGATCACGTCACTGTACTCCAGCCTG...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAACTGAGCAGAGCTTCTaGCAGGGGTGGATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGTEQSF*QGWIAF
Trigger: GAACGCAATCCACCCCTGGCAGAAGCTCTGCTCAGT...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp GGCACCAGATGGTGGCTTCTGCTCAGTCCGGGGGTCATTTATCTAAAGCTGTGTTATGTTACACCTTTCTaGACAAGCTTGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: GTRWWLLLSPGVIYLKLCYVTPF*TSLAHD
Trigger: ATCATGAGCCAAGCTTGTGCAGAAAGGTGTAACATA...ACACAGCTTTAGATAAATGACCCCCGGACTGAGCAGAAGCCACCATCTGGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR GCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGGGTAAGTTTGGGAACTaGACTGGAGGTCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKGKFGN*TGGRGS
Trigger: AGACCCTCGACCTCCAGTGCAGTTCCCAAACTTACC...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTCAGCAAACCATACCTTaGCATCAGCACAGACACACA +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPQQTIP*HQHRHT
Trigger: TGTGTGTCTGTGCTGATGGCAAGGTATGGTTTGCTG...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTCTGATTTTCCCAGTCTaGTCTGAAGTGGAACCAGGT +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPLIFPV*SEVEPG
Trigger: ACCTGGTTCCACTTCAGAGCAGACTGGGAAAATCAG...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCATTCCGGAGCAGCCGTaGTCACAAAGGGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: ANTGSHCIATRFCINHSTIPEQP*SQRDVR
Trigger: CCTCACATCCCTTTGTGAGCACGGCTGCTCCGGAAT...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGGTCTGCAATCTCCTCTaGCCGTACATCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKVCNLL*PYILSS
Trigger: GGAAGAGAGGATGTACGGCCAGAGGAGATTGCAGAC...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCGCTTCTGCTAATTCTTaGTCTGCAATCTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISASANS*SAISSG
Trigger: GCCAGAGGAGATTGCAGACCAAGAATTAGCAGAAGC...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTGGATTGTCCAAGCCCTaGGGAGATGAAGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPGLSKP*GDEVIS
Trigger: AGAAATAACTTCATCTCCTCAGGGCTTGGACAATCC...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTTCTTCTATCTTTGCCTaGGCTTCAAGGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFSSIFA*ASRSKG
Trigger: TCCCTTTGACCTTGAAGCTCAGGCAAAGATAGAAGA...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAGCTCAGAAGTCTGATTaGGTGCATCCTCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGAQKSD*VHPPHL
Trigger: CAGGTGAGGAGGATGCACTCAATCAGACTTCTGAGC...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGATTCCCCACCAAAATTTaGTGCCTCTGCTATTCAGAG +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGFPTKI*CLCYSE
Trigger: CTCTGAATAGCAGAGGCATCAAATTTTGGTGGGGAA...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAAGCAAGGACAGCTCATaGGGGTTGGCCAGCAACATA +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGSKDSS*GLASNI
Trigger: TATGTTGCTGGCCAACCCGCATGAGCTGTCCTTGCT...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCTCTTCCAGCCCCATATaGCAACCGGGCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGSSSPI*QPGTLW
Trigger: CCAGAGTGTGCCCGGTTGGCATATGGGGCTGGAAGA...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCGGAGATGAGTGGGACTaGTGTGTTCCTGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGGDEWD*CVPGGW
Trigger: CCAGCCACCAGGAACACAGCAGTCCCACTCATCTCC...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCACAGCTCATGCGGGTTaGCCAGCAACATATCTCGGA +
Preference number: 4 (lower is better)
Translates to: ANTGSHCIATRFCINHSTTAHAG*PATYLG
Trigger: TCCGAGATATGTTGCTGGCCAACCCGCATGAGCTGT...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAGTTTGGGAACTGCACTaGAGGTCGAGGGTCTGCATT +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGVWELH*RSRVCI
Trigger: AATGCAGACCCTCGACCTCCAGTGCAGTTCCCAAAC...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCTCTCCAGGAGATGAGTaGGACTGCTGTGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ANTGSHCIATRFCINHSTSPGDE*DCCVPG
Trigger: ACCAGGAACACAGCAGTCCCACTCATCTCCTGGAGA...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGTCTCATGATAGTCATCTaGGCACCTTATATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CRLSMSSPRSMSMGCSSSLMIVI*APYIFF
Trigger: GAAGAAGATATAAGGTGCCCAGATGACTATCATGAG...ACTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483899.1
3UTR CAA 72 bp GTTTCTAAATTGACAACTGAGCCAGCAAACCATACCTaGCCATCAGCACAGACACACAGTCACAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: VSKLTTEPANHT*PSAQTHSHSVE
Trigger: CTCCACACTGTGACTGTGTGTCTGTGCTGATGGCAAGGTATGGTTTGCTGGCTCAGTTGTCAATTTAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 72 bp AGCTTCTCTTGGGACACACTGCCAGTGATAACAGGTTaGAAATATGCAGCAGTTCAATCATCCTGCTCACCC +
Preference number: 4 (lower is better)
Translates to: SFSWDTLPVITG*KYAAVQSSCSP
Trigger: GGGTGAGCAGGATGATTGAACTGCTGCATATTTCAAACCTGTTATCACTGGCAGTGTGTCCCAAGAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 72 bp CATGTTTCTACCCTGCATGTGAGGTGGTCTGATGGATaGACTGACTGTCACTGGTGCATTTTTAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: HVSTLHVRWSDG*TDCHWCIFRVI
Trigger: GATGACCCTAAAAATGCACCAGTGACAGTCAGTCAATCCATCAGACCACCTCACATGCAGGGTAGAAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTTCCTCTGCTGATTTTTaGAGGGCTTCTGCTAATTCT +
Preference number: 4 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFSSADF*RASANS
Trigger: AGAATTAGCAGAAGCCCTTCAAAAATCAGCAGAGGA...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAAATCAGGACTCTGTCCTaGAGAACGGGCGGGATGGTT +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSEIRTLS*RTGGMV
Trigger: AACCATCCCGCCCGTTCTTCAGGACAGAGTCCTGAT...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp TTTCTTCAGGTCGATGGAACACTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGTCTGCTGAGGAAGCATaGTCAGAAAGATCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: FLQVDGTLVPFKHVQSQKSAEEA*SERSCK
Trigger: TTTACAAGATCTTTCTGATCATGCTTCCTCAGCAGA...CTTCTGGGACTGGACATGCTTAAACGGCACCAGTGTTCCATCGACCTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTGTAACTAGGGACTGTTaGGCTGTATCGATTTCCATA +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPVTRDC*AVSISI
Trigger: TATGGAAATCGATACAGCTCAACAGTCCCTAGTTAC...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGTTTCAGATGTATTTTCTaGAGCTGGTTTACTGCTAAC +
Preference number: 4 (lower is better)
Translates to: CRLSMSSPRSMSMGCSSSFRCIF*SWFTAN
Trigger: GTTAGCAGTAAACCAGCTTCAGAAAATACATCTGAA...ACTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp TTTCTTCAGGTCGATGGAACACTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGCTCAGCTATGGTTTCTaGTTGACAGATTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLQVDGTLVPFKHVQSQKLSYGF*LTDYFF
Trigger: GAAGAAGTAATCTGTCAATCAGAAACCATAGCTGAG...CTTCTGGGACTGGACATGCTTAAACGGCACCAGTGTTCCATCGACCTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR TCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAAGTCATCTGGGCACCTaGGTCAACAAAGGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGSHLGT*VNKGFH
Trigger: GTGAAAGCCTTTGTTGACTCAGGTGCCCAGATGACT...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCATTGGATGTTTTAGCTaGGGTTACAGTGACAGAACG +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISIGCFS*GYSDRT
Trigger: CGTTCTGTCACTGTAACCTCAGCTAAAACATCCAAT...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGATTGAGGTGTTATCAGTaGGATGCTAGCAAACCCAAA +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGLRCYQ*DASKPK
Trigger: TTTGGGTTTGCTAGCATCTCACTGATAACACCTCAA...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTAGCTCACAAAGGGATGTaGGGAGGATGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLAHKGM*GGCCRT
Trigger: TGTGCGGCAGCATCCTCCTCACATCCCTTTGTGAGC...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAACTGCCAGGGGTGGATTaGGTTCCTTCAGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSELPGVD*VPSART
Trigger: TGTCCTTGCTGAAGGAACGCAATCCACCCCTGGCAG...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAAGCCGGGGACTTGATGTaGCAGGCACAGCTATACTAC +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSEAGDLM*QAQLYY
Trigger: GTAGTATAGCTGTGCCTGGCACATCAAGTCCCCGGC...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGCTCTCCAGCTTCCTTTaGCAAGCAACTGGTTACCTT +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKLSSFL*QATGYL
Trigger: AAGGTAACCAGTTGCTTGGCAAAGGAAGCTGGAGAG...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGACACTACATGCATCATaGCTTCTGACGCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKTLHAS*LLTLCI
Trigger: GATGCAGAGCGTCAGAAGCCATGATGCATGTAGTGT...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCATTTACCACTTTTCTCTaGTCTGGGGCCCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSFTTFL*SGAHSS
Trigger: GCTGGAGTGGGCCCCAGACCAGAGAAAAGTGGTAAA...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGACTTGACATCTGCAAATaGAATTATGGTTGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SESLGLIGQTEAETERARLDICK*NYGCSV
Trigger: AACAGAACAACCATAATTCCATTTGCAGATGTCAAG...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTACTGGTTATTACTGTTaGCAACCAGAATTCACAGGG +
Preference number: 4 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFTGYYC*QPEFTG
Trigger: CCCTGTGAATTCTGGTTGCCAACAGTAATAACCAGT...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTAAAGGTGCCCATTACTaGTTATTACTGTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPKGAHY*LLLLAT
Trigger: GGTTGCCAACAGTAATAACCAGTAATGGGCACCTTT...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCCTGAAGCCCAAACTGTaGGATGAAGGCTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: ANTGSHCIATRFCINHSTLKPKL*DEGYWL
Trigger: CAGCCAATAGCCTTCATCCCACAGTTTGGGCTTCAG...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp ACTTGCATTGTAACTCCCCCACAATATCCCATCCAATGTAATAAGGATTCATGGGCCCTGCAGCTTTTCTaGCCGATGATTTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TCIVTPPQYPIQCNKDSWALQLF*PMICKA
Trigger: AGCCTTGCAAATCATCGGCCAGAAAAGCTGCAGGGC...CCATGAATCCTTATTACATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTCAGTCTGCTCTGAAGTaGAACCAGGTAACTCTAATA +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPQSALK*NQVTLI
Trigger: TATTAGAGTTACCTGGTTCCACTTCAGAGCAGACTG...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 72 bp CACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTaGGAGGATCCACATTCTGTGGGAGCCCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: HCILKMEYFSSH*EDPHSVGAHFL
Trigger: AAGGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR CAA 72 bp GTGACAGAACGGTTCTTATTTATGGATTCCCTAGATTaGGGGACACCTTCCTTATCGGTTGACAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: VTERFLFMDSLD*GTPSLSVDRPS
Trigger: TGATGGCCTGTCAACCGATAAGGAAGGTGTCCCCAAATCTAGGGAATCCATAAATAAGAACCGTTCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 72 bp TCCACTTGGAACTGTTTCCCAAATATCCACACTGAATaGTGTGCCAAGGTTCGTTCTGCTTACATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: STWNCFPNIHTE*CAKVRSAYMEG
Trigger: GCCTTCCATGTAAGCAGAACGAACCTTGGCACACAATTCAGTGTGGATATTTGGGAAACAGTTCCAAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCATGCATCATGGCTTCTaGCGCTCTGCATCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGMHHGF*RSASSA
Trigger: AGCAGAGGATGCAGAGCGTCAGAAGCCATGATGCAT...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAGGGATTATCTAAAGTaGGATCCAATGCACCAATGT +
Preference number: 4 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFRDYLK*DPMHQC
Trigger: ACATTGGTGCATTGGATCTCACTTTAGATAATCCCT...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTGAATTCTGTATGCCCTaGCCTAAGTCTTTAACCAAT +
Preference number: 4 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFEFCMP*PKSLTN
Trigger: ATTGGTTAAAGACTTAGGTCAGGGCATACAGAATTC...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTAAAACTCCTGAGATATaGGCCTCCATTTTGATTGTG +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPKTPEI*ASILIV
Trigger: CACAATCAAAATGGAGGCTCATATCTCAGGAGTTTT...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGACATGATGAATCTACGTaGCACGCCATCCCATCACTA +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGHDEST*HAIPSL
Trigger: TAGTGATGGGATGGCGTGTCACGTAGATTCATCATG...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp ACTTGCATTGTAACTCCCCCACAATATCCCATCCAATGTAATAAGGATTCATGGCTTGTAGTTAAGTGCTaGCCGCAGAACTGCCCACTA +
Preference number: 4 (lower is better)
Translates to: TCIVTPPQYPIQCNKDSWLVVKC*PQNCPL
Trigger: TAGTGGGCAGTTCTGCGGTCAGCACTTAACTACAAG...CCATGAATCCTTATTACATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCGGCTGTCTGGAGCCCTaGACAGGTATGAGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGGCLEP*TGMSGN
Trigger: ATTTCCACTCATACCTGTTCAGGGCTCCAGACAGCC...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCAACTGAGCAGAGCTTCTaGCAGGGGTGGATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPTEQSF*QGWIAF
Trigger: GAACGCAATCCACCCCTGGCAGAAGCTCTGCTCAGT...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTAAGACGAATCCTTTCTTaGTCTCTCCGGGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLRRILS*SLRARS
Trigger: GGACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCT...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCTGCCAAGGTTCGTTCTaGTTACATGGAAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: ANTGSHCIATRFCINHSTCQGSF*LHGRPF
Trigger: AAAGGGCCTTCCATGTAAGCAGAACGAACCTTGGCA...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTGCTGATTACATGTTCTaGTCTAGATTCCCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPADYMF*SRFPFS
Trigger: TGAAAACGGGAATCTAGAGCAGAACATGTAATCAGC...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATGGAAGAAAGGTGGTCTaGGAGCCTGTGGTGCCGATC +
Preference number: 4 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHGRKVV*EPVVPI
Trigger: GATCGGCACCACAGGCTCCCAGACCACCTTTCTTCC...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAGCTTCTGCTAATTCTTaGTCTGCAATCTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGASANS*SAISSG
Trigger: GCCAGAGGAGATTGCAGACCAAGAATTAGCAGAAGC...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGACACACAGTCACAGTGTaGAGAGTTCATCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGHTVTV*RVHLFL
Trigger: TAAAAACAGATGAACTCTCCACACTGTGACTGTGTG...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTGTTCTTTTAAGAATCTaGGTAGCACCACGTTTCACT +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPVLLRI*VAPRFT
Trigger: AGTGAAACGTGGTGCTACCCAGATTCTTAAAAGAAC...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCAATGCATCATGGCTTCTaGCGCTCTGCATCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPMHHGF*RSASSA
Trigger: AGCAGAGGATGCAGAGCGTCAGAAGCCATGATGCAT...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGATTCAGATGTATTTTCTaGAGCTGGTTTACTGCTAAC +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGFRCIF*SWFTAN
Trigger: GTTAGCAGTAAACCAGCTTCAGAAAATACATCTGAA...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCGCTATGGTTTCTGATTaGCAGATTACTTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISAMVSD*QITSSD
Trigger: ATCTGAAGAAGTAATCTGTCAATCAGAAACCATAGC...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTAGAAATCTAATGGTCTaGTGCAGGATAACTGTGAAT +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPRNLMV*CRITVN
Trigger: ATTCACAGTTATCCTGCATCAGACCATTAGATTTCT...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp ACTTGCATTGTAACTCCCCCACAATATCCCATCCAATGTAATAAGGATTCATGGTCGATGGAACACTGGTaGCGTTTAAGCATGTCCAGT +
Preference number: 4 (lower is better)
Translates to: TCIVTPPQYPIQCNKDSWSMEHW*RLSMSS
Trigger: ACTGGACATGCTTAAACGGCACCAGTGTTCCATCGA...CCATGAATCCTTATTACATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAATCTGGGAGCCTGTGGTaGCGATCACGAGTACATTTT +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSESGSLW*RSRVHF
Trigger: AAAATGTACTCGTGATCGGCACCACAGGCTCCCAGA...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATGGGGCCCACTCCAGCTaGAGTACACACACACTACAT +
Preference number: 4 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHGAHSS*STHTLH
Trigger: ATGTAGTGTGTGTGTACTGCAGCTGGAGTGGGCCCC...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGATCTGGCTCAACATTCTaGTTGCAGGTTTCTATATAT +
Preference number: 4 (lower is better)
Translates to: QTEAETERARLIGLPTSGSGSTF*LQVSIY
Trigger: ATATATAGAAACCTGCAAGCAGAATGTTGAGCCAGA...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCAGCACCACGTTTCACTTaGATTGTAACTCCCCCACAA +
Preference number: 4 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSAPRFT*IVTPPQ
Trigger: TTGTGGGGGAGTTACAATGCAAGTGAAACGTGGTGC...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTAGCAGTTCAATCATCCTaGTCACCCTCACCACAGGTG +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLAVQSS*SPSPQV
Trigger: CACCTGTGGTGAGGGTGAGCAGGATGATTGAACTGC...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCATTCAAGCGATTCTTCTaGCTCAGTTTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSFKRFF*LSFPSS
Trigger: GCTACTCGGGAAACTGAGGCAGAAGAATCGCTTGAA...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAAAGGTCGATGGAACACTaGTGCCGTTTAAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSERSMEH*CRLSMS
Trigger: GGACATGCTTAAACGGCACCAGTGTTCCATCGACCT...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCAGGTCGATGGAACACTaGTGCCGTTTAAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGRSMEH*CRLSMS
Trigger: GGACATGCTTAAACGGCACCAGTGTTCCATCGACCT...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTAGTCTGCAATCTCCTCTaGCCGTACATCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLVCNLL*PYILSS
Trigger: GGAAGAGAGGATGTACGGCCAGAGGAGATTGCAGAC...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGACTCATGATAGTCATCTaGGCACCTGAGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGLMIVI*APESTK
Trigger: CTTTGTTGACTCAGGTGCCCAGATGACTATCATGAG...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCAAAGCAATTATACTTTaGCCTTTATGTAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WNTFLRTWRIHILWEPISKAIIL*PLCSPS
Trigger: GCTGGGACTACATAAAGGCCAAAGTATAATTGCTTT...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTGAGCCTAGCTGCAACTaGTTATCTTTATGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPEPSCN*LSLCVN
Trigger: ATTAACACATAAAGATAACCAGTTGCAGCTAGGCTC...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 72 bp TGTTCTTTTAAGAATCTGGGTAGCACCACGTTTCACTaGCATTGTAACTCCCCCACAATATCCCATCCAATG +
Preference number: 4 (lower is better)
Translates to: CSFKNLGSTTFH*HCNSPTISHPM
Trigger: CATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGTGAAACGTGGTGCTACCCAGATTCTTAAAAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 72 bp CCACCACCCATAAAGCAAATACAGGGTCCCATTGCATaGCTACTAGATTTTGCATCAATCATAGCACCAACT +
Preference number: 4 (lower is better)
Translates to: PPPIKQIQGPIA*LLDFASIIAPT
Trigger: AGTTGGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGCTTTATGGGTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAACAAGCCCTGAGGAGATaGAGTTATTTCTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSEQALRR*SYFSRR
Trigger: TCTCCTGGAGAAATAACTTCATCTCCTCAGGGCTTG...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCTATTTCTCCAGGAGATaGGTGGGACTGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFYFSRR*VGLLCS
Trigger: GGAACACAGCAGTCCCACTCATCTCCTGGAGAAATA...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAAAGGTGCAGTGTAACTaGTTGGATGTTTTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGKVQCN*LDVLAE
Trigger: CTCAGCTAAAACATCCAATCAGTTACACTGCACCTT...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTACTCACACTGAGCGTTTaGAGAACTTCCTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLLTLSV*RTSWQK
Trigger: CTTCTGCCAGGAAGTTCTTCAAACGCTCAGTGTGAG...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAAAGCTTTTCTGGCCGATaGTTTGCAAGGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSESFSGR*FARLFA
Trigger: AGCAAACAGCCTTGCAAATCATCGGCCAGAAAAGCT...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCTCTGGGAGCCTGTGGTaGCGATCACGAGTACATTTT +
Preference number: 4 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFSGSLW*RSRVHF
Trigger: AAAATGTACTCGTGATCGGCACCACAGGCTCCCAGA...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTTCCTCAATGTTCTGTTaGCTTATATCTTCTTCTATC +
Preference number: 4 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPSSMFC*LISSSI
Trigger: GATAGAAGAAGATATAAGGCAACAGAACATTGAGGA...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTATTGCTACTAGATTTTaGATCAATCATAGCACCAAC +
Preference number: 4 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFIATRF*INHSTN
Trigger: GTTGGTGCTATGATTGATGCAAAATCTAGTAGCAAT...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGAATACAGGGTCCCATTaGATTGCTACTAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKNTGSH*IATRFC
Trigger: GCAAAATCTAGTAGCAATGCAATGGGACCCTGTATT...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCAGGAAACGAATCAGCCTaGCTCGGGAAGGAAATACAG +
Preference number: 4 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPGNESA*LGKEIQ
Trigger: CTGTATTTCCTTCCCGAGGCAGGCTGATTCGTTTCC...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGATCTTAAAGACAACCTaGCTGACCTGTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKILKTT*LTCCSS
Trigger: TGAAGAACAACAGGTCAGCCAGGTTGTCTTTAAGAT...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTAGGAGTTTCACCATGTTaGCCAGGCCTGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLGVSPC*PGLSQT
Trigger: AGTTTGAGACAGGCCTGGCCAACATGGTGAAACTCC...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCAACCCTGCATGTGAGGTaGTCTGATGGATTGACTGAC +
Preference number: 4 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPTLHVR*SDGLTD
Trigger: GTCAGTCAATCCATCAGACCACCTCACATGCAGGGT...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 72 bp GGATTATCTAAAGTGAGATCCAATGCACCAATGTTCTaGACATTGGCATTCTGCCTGCCTGTTGAATTAAGC +
Preference number: 4 (lower is better)
Translates to: GLSKVRSNAPMF*TLAFCLPVELS
Trigger: GCTTAATTCAACAGGCAGGCAGAATGCCAATGTCAAGAACATTGGTGCATTGGATCTCACTTTAGATAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
3UTR CAA 72 bp AGGAAAGAATTATCTAAAACCTATCCAGTAGGATTATaGCACAGTGGGGCCCACAGGACAATGATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RKELSKTYPVGL*HSGAHRTMISK
Trigger: CTTGGAAATCATTGTCCTGTGGGCCCCACTGTGCAATAATCCTACTGGATAGGTTTTAGATAATTCTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCATCTGTGGTTGTCTGTaGGAGGTCTTTCCGCATAGA +
Preference number: 4 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFICGCL*EVFPHR
Trigger: TCTATGCGGAAAGACCTCTCACAGACAACCACAGAT...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCACTCTCCAAATAGACTaGCCGTTCCAAGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFTLQID*PFQAPR
Trigger: TCTTGGTGCTTGGAACGGTCAGTCTATTTGGAGAGT...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGTCTGGAGCTCTTAATTaGATAAAAGCTGACGATGAA +
Preference number: 4 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKSGALN*IKADDE
Trigger: TTCATCGTCAGCTTTTATTCAATTAAGAGCTCCAGA...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCACCTAAGTTCATTCAGTaGACTCCTAGTAACACCTAC +
Preference number: 4 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSPKFIQ*TPSNTY
Trigger: GTAGGTGTTACTAGGAGTTCACTGAATGAACTTAGG...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGATATGTTACACCTTTCTaGACAAGCTTGGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGYVTPF*TSLAHD
Trigger: ATCATGAGCCAAGCTTGTGCAGAAAGGTGTAACATA...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR GCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAAAAGAGTTTTAACACATaGACTCGCCATCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSEKSFNT*TRHLSS
Trigger: GCTGGAGAGATGGCGAGTGCATGTGTTAAAACTCTT...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCACCCTTCCCACCCCGTaGTTCCAAAGATTTATAAGC +
Preference number: 4 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFTLPTP*FQRFIS
Trigger: GCTTATAAATCTTTGGAACCACGGGGTGGGAAGGGT...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp ACTTGCATTGTAACTCCCCCACAATATCCCATCCAATGTAATAAGGATTCATGGGTAGAATGCATAATCTaGTCAGCTTCTCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: TCIVTPPQYPIQCNKDSWVECII*SASLGT
Trigger: TGTCCCAAGAGAAGCTGACCAGATTATGCATTCTAC...CCATGAATCCTTATTACATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATCAAGCCCTGAGGAGATaGAGTTATTTCTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHQALRR*SYFSRR
Trigger: TCTCCTGGAGAAATAACTTCATCTCCTCAGGGCTTG...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCGCACAGCTATACTACTaGAATCTATTCGGGGTAAGT +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGAQLYY*NLFGVS
Trigger: ACTTACCCCGAATAGATTTCAGTAGTATAGCTGTGC...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAAGTTCTTCACGCCCTCTaGAAAGCAGTAAACTACAAT +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSEVLHAL*KAVNYN
Trigger: ATTGTAGTTTACTGCTTTTCAGAGGGCGTGAAGAAC...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCAGAAGCCAATGATCTGTaGTTGTCTGTGAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPEANDL*LSVRGL
Trigger: AAGACCTCTCACAGACAACCACAGATCATTGGCTTC...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCTGTAATAAGGATTCATaGCAATCCATGCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGCNKDS*QSMQQP
Trigger: AGGCTGCTGCATGGATTGCCATGAATCCTTATTACA...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAGAGGTTTCACCGTGTTaGACAAACAGCTTTATTTTT +
Preference number: 4 (lower is better)
Translates to: EFEQPLHSEDGILFFALGEVSPC*TNSFIF
Trigger: AAAAATAAAGCTGTTTGTCCAACACGGTGAAACCTC...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCTTGACTGACTGTCACTaGTGCATTTTTAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGLTDCH*CIFRVI
Trigger: GATGACCCTAAAAATGCACCAGTGACAGTCAGTCAA...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 72 bp TTGTGGACACTGTTCATTCTGGGTAAGATGCTCATTTaGGGTCCATCTTTCAGAAAGGTCTTTAATACTGGT +
Preference number: 4 (lower is better)
Translates to: LWTLFILGKMLI*GPSFRKVFNTG
Trigger: ACCAGTATTAAAGACCTTTCTGAAAGATGGACCCAAAATGAGCATCTTACCCAGAATGAACAGTGTCCACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCAATATTCTTGGTCATGTaGAGCTTTTTGTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSIFLVM*SFLLCN
Trigger: GTTGCACAACAAAAAGCTTCACATGACCAAGAATAT...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCCTCAGCTATGGTTTCTaGTTGACAGATTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGLSYGF*LTDYFF
Trigger: GAAGAAGTAATCTGTCAATCAGAAACCATAGCTGAG...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCTTTTTCTGTCTCCACTaGTACAGATATGGCCTGATG +
Preference number: 4 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFFFCLH*YRYGLM
Trigger: CATCAGGCCATATCTGTATCAGTGGAGACAGAAAAA...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCCATCACCTAGACTCCTaGAGTTTACATTTTCTACAG +
Preference number: 4 (lower is better)
Translates to: VTIQKFYLYASALQHICGHHLDS*SLHFLQ
Trigger: CTGTAGAAAATGTAAACTTCAGGAGTCTAGGTGATG...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTATTATGTGTTAATAGCTaGAGCCCAAACTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLLCVNS*SPNCGM
Trigger: CATCCCACAGTTTGGGCTTCAGCTATTAACACATAA...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAAAATTACTATTTCCACTaGCACAAAGGACACTCTCCA +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSENYYFH*HKGHSP
Trigger: TGGAGAGTGTCCTTTGTGGCAGTGGAAATAGTAATT...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCACTGACTGTCACTGGTaGATTTTTAGGGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFTDCHW*IFRVIF
Trigger: GAAGATGACCCTAAAAATGCACCAGTGACAGTCAGT...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCCAAGTTGCACCCAGCTaGTTTAAAATAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFQVAPS*FKIAHP
Trigger: AGGATGTGCTATTTTAAAGCAGCTGGGTGCAACTTG...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAATCATCTGTTTTTAGCTaGATGGGTAGTGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSESSVFS*MGSGIS
Trigger: AGAAATCCCACTACCCATCCAGCTAAAAACAGATGA...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCATCTGCTGAGGAAGCATaGTCAGAAAGATCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPSAEEA*SERSCK
Trigger: TTTACAAGATCTTTCTGATCATGCTTCCTCAGCAGA...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCAAGGGATTATCTAAAGTaGGATCCAATGCACCAATGT +
Preference number: 4 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPRDYLK*DPMHQC
Trigger: ACATTGGTGCATTGGATCTCACTTTAGATAATCCCT...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTAAATTTGGCTTTTTGGTaGGTACTTGTGCTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLNLAFW*VLVLEN
Trigger: GTTCTCTAGCACAAGTACTCACCAAAAAGCCAAATT...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAAGGATTTCTCAATAACTaGTCTCCTCAGGCATTTATA +
Preference number: 4 (lower is better)
Translates to: AVSISINVSEFEQPLHSEGFLNN*SPQAFI
Trigger: TATAAATGCCTGAGGAGATCAGTTATTGAGAAATCC...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTATTCAAAGACTCATGTTaGATAGCCTTCAAGAGTACC +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLFKDSC*IAFKST
Trigger: GGTACTCTTGAAGGCTATGCAACATGAGTCTTTGAA...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CCA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTAAGGATATTTGGCAAGTaGGTTAAGCTCATTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLRIFGK*VKLIQS
Trigger: ACTCTGAATGAGCTTAACCCACTTGCCAAATATCCT...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATAGTTATTTCTTCGGATaGATTCTGCATAGGCATAGC +
Preference number: 4 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHSYFFG*ILHRHS
Trigger: GCTATGCCTATGCAGAATTCATCCGAAGAAATAACT...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp TTTGATGTTTCTACTTCCATCAAGGGATTATCTAAAGTGAGATCCAATGCACCAATATTCTTGGTCATGTaGAGCTTTTTGTTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: FDVSTSIKGLSKVRSNAPIFLVM*SFLLCN
Trigger: GTTGCACAACAAAAAGCTTCACATGACCAAGAATAT...TGGTGCATTGGATCTCACTTTAGATAATCCCTTGATGGAAGTAGAAACATCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR TCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATCAAAAGTTTCTAAATTaGCAACTGAGCCAGCAAACC +
Preference number: 4 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHQKFLN*QLSQQT
Trigger: GGTTTGCTGGCTCAGTTGTCAATTTAGAAACTTTTG...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR TCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATTTCCCTCACAGTTCTTaGCATCTGCAAATGGAATTA +
Preference number: 4 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHFPHSS*HLQMEL
Trigger: TAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAA...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATTTCTGGCCGATGATTTaGAAGGCTGTTTGCTATATA +
Preference number: 4 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHFWPMI*KAVCYI
Trigger: TATATAGCAAACAGCCTTGCAAATCATCGGCCAGAA...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR GCA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATAAAGGGTCTACAATGTaGAGCTGTCTAAAAGAACAT +
Preference number: 4 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHKGSTM*SCLKEH
Trigger: ATGTTCTTTTAGACAGCTGCACATTGTAGACCCTTT...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
3UTR CAA 72 bp AGAGTCAGACTTCAGACAAAATCATTTAACACTAAGTaGAGAAATCACTCTTTCGAAGCTTCTGTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: RVRLQTKSFNTK*RNHSFEASVSN
Trigger: GTTTGAAACAGAAGCTTCGAAAGAGTGATTTCTCAACTTAGTGTTAAATGATTTTGTCTGAAGTCTGACTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS GCA 90 bp GCTGCGGGGATGCCAGACTCGAGCTCGCACAGCGCGCGGAAGTTGTaGAGCTCGAAGTCGGCGTCGACCTGGAGGGAAAAGGTCACCTCG +
Preference number: 5 (lower is better)
Translates to: AAGMPDSSSHSARKL*SSKSASTWREKVTS
Trigger: CGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCTGGCATCCCCGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000480945.6
ENST00000486680.1
ENST00000546927.1
CDS-3UTR CAA 90 bp CGGGCACACTCTGGTAGCTCTCCCTCAGGAAGAAAGGTGGTCTGGGAGCCTGTGTCTGCCAGGGGTGGATaGCGTTCCTTCAGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: RAHSGSSPSGRKVVWEPVSARGG*RSFSKD
Trigger: GTCCTTGCTGAAGGAACGCAATCCACCCCTGGCAGA...CACAGGCTCCCAGACCACCTTTCTTCCTGAGGGAGAGCTACCAGAGTGTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320153.10
CDS-3UTR CAA 90 bp CTGGTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCGACAGCTCATGCGGGTaGGCCAGCAACATATCTCGG +
Preference number: 5 (lower is better)
Translates to: LVPFKHVQSQKHVHGLFLDSSCG*ASNISR
Trigger: CCGAGATATGTTGCTGGCCAACCCGCATGAGCTGTC...GAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS TCA 90 bp GCTGGCGCTGCCGGGGACTTGATGTGCCAGGCACAGCTATACTACTaGAATCTATTCGGGGTAAGTTTGGGAACTGCACTGGAGGTCGAG +
Preference number: 5 (lower is better)
Translates to: AGAAGDLMCQAQLYY*NLFGVSLGTALEVE
Trigger: CTCGACCTCCAGTGCAGTTCCCAAACTTACCCCGAATAGATTTCAGTAGTATAGCTGTGCCTGGCACATCAAGTCCCCGGCAGCGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480945.6
ENST00000486680.1
CDS GCA 90 bp CTGAGGTGCTATGCTCTGCTACCTGCTGATGGTTCTGCTGGGGGATaGTCAACCACCAGATGTCTTACTTGGGAACTGCACTGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: LRCYALLPADGSAGG*STTRCLTWELHWRS
Trigger: CGACCTCCAGTGCAGTTCCCAAGTAAGACATCTGGTGGTTGAGCATCCCCCAGCAGAACCATCAGCAGGTAGCAGAGCATAGCACCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546927.1
CDS-3UTR CAA 90 bp TCTGAGTCACTGGGCTTGATAGGGCAGACTGAAGCAGAGACAGAGCGAGCAAGACAGACGAATCCTTTCTaGCTCTCTCCGGGCTCGGTC +
Preference number: 5 (lower is better)
Translates to: SESLGLIGQTEAETERARQTNPF*LSPGSV
Trigger: GACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCTG...TCTTGCTCGCTCTGTCTCTGCTTCAGTCTGCCCTATCAAGCCCAGTGACTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS GCA 90 bp GCTTCAAGGTCAAAGGGATCAGCAGAAAACAGACGAATCCTTTCTTaGTCTCTCCGGGCTCGGTCCTGCTGCTGCTCCACCAGGACTCTA +
Preference number: 5 (lower is better)
Translates to: ASRSKGSAENRRILS*SLRARSCCCSTRTL
Trigger: TAGAGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCTGTTTTCTGCTGATCCCTTTGACCTTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320153.10
ENST00000480945.6
ENST00000483899.1
ENST00000486680.1
CDS-3UTR CAA 90 bp TGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGTCAGACGAATCCTTTCTaGCTCTCTCCGGGCTCGGTC +
Preference number: 5 (lower is better)
Translates to: CRLSMSSPRSMSMGCSSSQTNPF*LSPGSV
Trigger: GACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCTG...ACTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS TCA 90 bp CCCCATCTTTCAAGCCATAAGAAGCCAATGATCTGTGGTTGTCTGTaGGAGGTCTTTCCGCATAGACGATCTGGCTCTCGGCTGCGGGGA +
Preference number: 5 (lower is better)
Translates to: PHLSSHKKPMICGCL*EVFPHRRSGSRLRG
Trigger: TCCCCGCAGCCGAGAGCCAGATCGTCTATGCGGAAAGACCTCTCACAGACAACCACAGATCATTGGCTTCTTATGGCTTGAAAGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000480945.6
ENST00000486680.1
ENST00000546927.1
CDS GCA 90 bp GTTCTGCTGGGGGATGCTCAACCACCAGATGTCTTACTTGGGAACTaGACTGGAGGTCGAGGGTCTGCATTCTCCTTCTGTCGTAAAATC +
Preference number: 5 (lower is better)
Translates to: VLLGDAQPPDVLLGN*TGGRGSAFSFCRKI
Trigger: GATTTTACGACAGAAGGAGAATGCAGACCCTCGACCTCCAGTGCAGTTCCCAAGTAAGACATCTGGTGGTTGAGCATCCCCCAGCAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546927.1
CDS-3UTR CAA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTCAGACGAATCCTTTCTaGCTCTCTCCGGGCTCGGTC +
Preference number: 5 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPQTNPF*LSPGSV
Trigger: GACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCTG...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCCACAGCGCGCGGAAGTaGTGCAGCTCGAAGTCGGCG +
Preference number: 5 (lower is better)
Translates to: ANTGSHCIATRFCINHSTHSARK*CSSKSA
Trigger: CGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTG...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS TCA 90 bp TTGGCCAGCAACATATCTCGGAGCAAGGCTGGATTGTCCAAGCCCTaGGGAGATGAAGTTATTTCTCCAGGAGATGAGTGGGACTGCTGT +
Preference number: 5 (lower is better)
Translates to: LASNISRSKAGLSKP*GDEVISPGDEWDCC
Trigger: ACAGCAGTCCCACTCATCTCCTGGAGAAATAACTTCATCTCCTCAGGGCTTGGACAATCCAGCCTTGCTCCGAGATATGTTGCTGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480945.6
ENST00000486680.1
CDS TCA 90 bp CCAAAGCGAATCCAAAACTCTGAGGTGCTATGCTCTGCTACCTGCTaGTGGTTCTGCTGGGGGATGCTCAACCACCAGATGTCTTACTTG +
Preference number: 5 (lower is better)
Translates to: PKRIQNSEVLCSATC*WFCWGMLNHQMSYL
Trigger: CAAGTAAGACATCTGGTGGTTGAGCATCCCCCAGCAGAACCATCAGCAGGTAGCAGAGCATAGCACCTCAGAGTTTTGGATTCGCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546927.1
CDS GCA 90 bp TACCTGGTCTGGGGCCCACTCCAGCTGCAGTACACACACACTACATaGATCATGGCTTCTGACGCTCTGTGTGAATTAGGAAACAGACAA +
Preference number: 5 (lower is better)
Translates to: YLVWGPLQLQYTHTT*IMASDALCELGNRQ
Trigger: TTGTCTGTTTCCTAATTCACACAGAGCGTCAGAAGCCATGATGCATGTAGTGTGTGTGTACTGCAGCTGGAGTGGGCCCCAGACCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548451.1
CDS-3UTR CAA 90 bp GTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGCCTTTCTGCACAAGCTaGGCTCATGATAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: VPFKHVQSQKHVHGLFLKPFCTS*AHDSHL
Trigger: CAGATGACTATCATGAGCCAAGCTTGTGCAGAAAGG...CTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR CAA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGGCCAATGATCTGTGGTaGTCTGTGAGAGGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWANDLW*SVRGLS
Trigger: GGAAAGACCTCTCACAGACAACCACAGATCATTGGC...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGTCTCTCCAGCTTCCTTaGCCAAGCAACTGGTTACCT +
Preference number: 5 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWSLQLP*PSNWLP
Trigger: AGGTAACCAGTTGCTTGGCAAAGGAAGCTGGAGAGA...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAACCTGGCTGACCTGTaGTTCTTCACGCCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFNLADL*FFTPSE
Trigger: TTCAGAGGGCGTGAAGAACAACAGGTCAGCCAGGTT...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp CAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTAAACCCTCCTTCTGGTCAGCTTCTCTaGGGACACACTGCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: QSMQQPVMHKVAQDLNPPSGQLL*GHTASD
Trigger: ATCACTGGCAGTGTGTCCCAAGAGAAGCTGACCAGA...AGGAGGGTTTAAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCAGGTGGTCTGATGGATaGACTGACTGTCACTGGTGC +
Preference number: 5 (lower is better)
Translates to: WNTFLRTWRIHILWEPISRWSDG*TDCHWC
Trigger: GCACCAGTGACAGTCAGTCAATCCATCAGACCACCT...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS CCA 90 bp AAATCAGCCCATGTAATATGCAACCAGCCTTGTGGTCTCACCAGATaGTGGCTTCTGCTCAGTCCGGGGGTCATTTATCTAAAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: KSAHVICNQPCGLTR*WLLLSPGVIYLKLC
Trigger: ACACAGCTTTAGATAAATGACCCCCGGACTGAGCAGAAGCCACCATCTGGTGAGACCACAAGGCTGGTTGCATATTACATGGGCTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486680.1
CDS-3UTR CAA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCGGCGCTGCCGGGGACTaGATGTGCCAGGCACAGCTA +
Preference number: 5 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFGAAGD*MCQAQL
Trigger: TAGCTGTGCCTGGCACATCAAGTCCCCGGCAGCGCC...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS CCA 90 bp ACTATAGCCCCAGGTGAGAACCACCGCATTACAGAAACTGAGAGCTaGAAACATGTCCAGCATTCAGTTTATCCACTGAGGCCAGTACAA +
Preference number: 5 (lower is better)
Translates to: TIAPGENHRITETES*KHVQHSVYPLRPVQ
Trigger: TTGTACTGGCCTCAGTGGATAAACTGAATGCTGGACATGTTTCCAGCTCTCAGTTTCTGTAATGCGGTGGTTCTCACCTGGGGCTATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486680.1
CDS-3UTR CAA 90 bp GTGCCGTTTAAGCATGTCCAGTCCCAGAAGCATGTCCATGGGCTGTTCCTCAAGTATCTTCTTCTATCTTaGCCTGAGCTTCAAGGTCAA +
Preference number: 5 (lower is better)
Translates to: VPFKHVQSQKHVHGLFLKYLLLS*PELQGQ
Trigger: TTGACCTTGAAGCTCAGGCAAAGATAGAAGAAGATA...CTTGAGGAACAGCCCATGGACATGCTTCTGGGACTGGACATGCTTAAACGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000483899.1
CDS-3UTR CAA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCCCTTTCTGCACAAGCTaGGCTCATGATAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: WNTFLRTWRIHILWEPISPFCTS*AHDSHL
Trigger: CAGATGACTATCATGAGCCAAGCTTGTGCAGAAAGG...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CAA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAAGACAGCTCATGCGGGTaGGCCAGCAACATATCTCGG +
Preference number: 5 (lower is better)
Translates to: AVSISINVSEFEQPLHSEDSSCG*ASNISR
Trigger: CCGAGATATGTTGCTGGCCAACCCGCATGAGCTGTC...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CAA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCCTATTCGGGGTAAGTTaGGGAACTGCACTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: ANTGSHCIATRFCINHSTLFGVS*GTALEV
Trigger: GACCTCCAGTGCAGTTCCCAAACTTACCCCGAATAG...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGACAGGGTCCCATTGCATaGCTACTAGATTTTGCATCA +
Preference number: 5 (lower is better)
Translates to: QTEAETERARLIGLPTSGQGPIA*LLDFAS
Trigger: TGATGCAAAATCTAGTAGCAATGCAATGGGACCCTG...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAGGTAGGAAAAGGCCATaGCAACGCCCTGCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: EFEQPLHSEDGILFFALGGRKRP*QRPAAF
Trigger: AAAAGCTGCAGGGCGTTGCAATGGCCTTTTCCTACC...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp TGCCCACTACTGGTTATGGTAAAGGAGCTGTCCGGTAAAGGTGCCCATTACTGGTCATCTTCCATTTATTaGTTGCACTTCTTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: CPLLVMVKELSGKGAHYWSSSIY*LHFFPG
Trigger: GCCAGGAAAGAAGTGCAACAAATAAATGGAAGATGA...CCAGTAATGGGCACCTTTACCGGACAGCTCCTTTACCATAACCAGTAGTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTTCCCGTTTTCACAAGTaGCACCCAGCTGCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFSRFHK*HPAALK
Trigger: TTTTAAAGCAGCTGGGTGCAACTTGTGAAAACGGGA...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTAGACAGCTCATGCGGGTaGGCCAGCAACATATCTCGG +
Preference number: 5 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLDSSCG*ASNISR
Trigger: CCGAGATATGTTGCTGGCCAACCCGCATGAGCTGTC...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CAA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCTCTGCCAGGGGTGGATaGCGTTCCTTCAGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFSARGG*RSFSKD
Trigger: GTCCTTGCTGAAGGAACGCAATCCACCCCTGGCAGA...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAGCTCACACTGAGCGTTaGAAGAACTTCCTGGCAGAA +
Preference number: 5 (lower is better)
Translates to: EFEQPLHSEDGILFFALGAHTER*KNFLAE
Trigger: TTCTGCCAGGAAGTTCTTCAAACGCTCAGTGTGAGC...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCATATCCAGTAGGATTATaGCACAGTGGGGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSYPVGL*HSGAHR
Trigger: CCTGTGGGCCCCACTGTGCAATAATCCTACTGGATA...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCTACTGGTTATTACTGTaGGCAACCAGAATTCACAGG +
Preference number: 5 (lower is better)
Translates to: WNTFLRTWRIHILWEPISYWLLL*ATRIHR
Trigger: CCTGTGAATTCTGGTTGCCAACAGTAATAACCAGTA...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp ACTTGCATTGTAACTCCCCCACAATATCCCATCCAATGTAATAAGGATTCATGGTGGAGTTTCACCATGTaGGCCAGGCCTGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TCIVTPPQYPIQCNKDSWWSFTM*ARPVSN
Trigger: GTTTGAGACAGGCCTGGCCAACATGGTGAAACTCCA...CCATGAATCCTTATTACATTGGATGGGATATTGTGGGGGAGTTACAATGCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp TGGAATACTTTTCTTCGCACTTGGAGGATCCACATTCTGTGGGAGCCCATTTCCGTTCAAAGACTCATGTaGCATAGCCTTCAAGAGTAC +
Preference number: 5 (lower is better)
Translates to: WNTFLRTWRIHILWEPISVQRLM*HSLQEY
Trigger: GTACTCTTGAAGGCTATGCAACATGAGTCTTTGAAC...GGAAATGGGCTCCCACAGAATGTGGATCCTCCAAGTGCGAAGAAAAGTATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GGATTCATGGCAATCCATGCAGCAGCCTGTGATGCACAAAGTAGCCCAAGATTTTATCTTCTTCTATCTTaGCCTGAGCTTCAAGGTCAA +
Preference number: 5 (lower is better)
Translates to: GFMAIHAAACDAQSSPRFYLLLS*PELQGQ
Trigger: TTGACCTTGAAGCTCAGGCAAAGATAGAAGAAGATA...AAATCTTGGGCTACTTTGTGCATCACAGGCTGCTGCATGGATTGCCATGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GTGTTGATTCTGTTGCCTTTCTTCAGGAAGCTCAAGGTCCCCTATGTTACAAAGAATATCCACACTGAATaGTGTGCCAAGGTTCGTTCT +
Preference number: 5 (lower is better)
Translates to: VLILLPFFRKLKVPYVTKNIHTE*CAKVRS
Trigger: AGAACGAACCTTGGCACACAATTCAGTGTGGATATT...CTTTGTAACATAGGGGACCTTGAGCTTCCTGAAGAAAGGCAACAGAATCAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp CAGACTGAAGCAGAGACAGAGCGAGCAAGACTCATAGGATTACCAACATCAGGATCCTTAATATACCCTTaGCATTCTAGAGCTGCTAAA +
Preference number: 5 (lower is better)
Translates to: QTEAETERARLIGLPTSGSLIYP*HSRAAK
Trigger: TTTAGCAGCTCTAGAATGCAAAGGGTATATTAAGGA...TCCTGATGTTGGTAATCCTATGAGTCTTGCTCGCTCTGTCTCTGCTTCAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GCTGTATCGATTTCCATAAATGTTTCTGAATTTGAGCAGCCACTGCATTCTGAACCTTTCTGCACAAGCTaGGCTCATGATAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: AVSISINVSEFEQPLHSEPFCTS*AHDSHL
Trigger: CAGATGACTATCATGAGCCAAGCTTGTGCAGAAAGG...TTCAGAATGCAGTGGCTGCTCAAATTCAGAAACATTTATGGAAATCGATACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CAA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCTTTCTGGCCGATGATTaGCAAGGCTGTTTGCTATAT +
Preference number: 5 (lower is better)
Translates to: ANTGSHCIATRFCINHSTFLADD*QGCLLY
Trigger: ATATAGCAAACAGCCTTGCAAATCATCGGCCAGAAA...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAGGGAAATTTGGCTTTTaGGTGAGTACTTGTGCTAGA +
Preference number: 5 (lower is better)
Translates to: EFEQPLHSEDGILFFALGGKFGF*VSTCAR
Trigger: TCTAGCACAAGTACTCACCAAAAAGCCAAATTTCCC...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAATTCCCCACCAAAATTaGATGCCTCTGCTATTCAGA +
Preference number: 5 (lower is better)
Translates to: EFEQPLHSEDGILFFALGIPHQN*MPLLFR
Trigger: TCTGAATAGCAGAGGCATCAAATTTTGGTGGGGAAT...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS TCA 90 bp AATGCATATAGGCTAGTTGTAACCAGATTGAACAAGGTGAAATGGTaGATGACAAATGCTAACTTCCCAAACTGCTGCGGATACAGACTG +
Preference number: 5 (lower is better)
Translates to: NAYRLVVTRLNKVKW*MTNANFPNCCGYRL
Trigger: CAGTCTGTATCCGCAGCAGTTTGGGAAGTTAGCATTTGTCATTCACCATTTCACCTTGTTCAATCTGGTTACAACTAGCCTATATGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548451.1
CDS-3UTR CAA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTATTAGGAGGGAGTCTATaGTCATCAGTAAGTTCCCCC +
Preference number: 5 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLLGGSL*SSVSSP
Trigger: GGGGGAACTTACTGATGACAATAGACTCCCTCCTAA...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GTTACGATCCAGAAATTCTACCTGTATGCTTCAGCATTACAACATATATGTGGCAAGGGACAAGGATATTaGGCAAGTGGGTTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: VTIQKFYLYASALQHICGKGQGY*ASGLSS
Trigger: TGAGCTTAACCCACTTGCCAAATATCCTTGTCCCTT...GCCACATATATGTTGTAATGCTGAAGCATACAGGTAGAATTTCTGGATCGTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GAATTTGAGCAGCCACTGCATTCTGAAGATGGAATACTTTTCTTCGCACTTGGAAGTAGCAAGGAATTCTaGTTCAAAGACTCATGTTGC +
Preference number: 5 (lower is better)
Translates to: EFEQPLHSEDGILFFALGSSKEF*FKDSCC
Trigger: GCAACATGAGTCTTTGAACAAGAATTCCTTGCTACT...TCCAAGTGCGAAGAAAAGTATTCCATCTTCAGAATGCAGTGGCTGCTCAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS CCA 90 bp CAAGTTGAGGGATGTTTCTGTAGTTTGGACATCCAAAATATTTGTTaGTTGCTTCCATTCTCTCACAATACACACAGCAATCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: QVEGCFCSLDIQNIC*LLPFSHNTHSNLHP
Trigger: AGGATGCAGATTGCTGTGTGTATTGTGAGAGAATGGAAGCAACCAACAAATATTTTGGATGTCCAAACTACAGAAACATCCCTCAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548451.1
CDS-3UTR CAA 90 bp ATTTTTCCCTCACAGTTCTTGACATCTGCAAATGGAATTATGGTTGTTCTGTTCATAAAGCATCACTACTaGGCCAAAACTTTCCGGAGC +
Preference number: 5 (lower is better)
Translates to: IFPSQFLTSANGIMVVLFIKHHY*AKTFRS
Trigger: GCTCCGGAAAGTTTTGGCCAAGTAGTGATGCTTTAT...GAACAGAACAACCATAATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp GCAAATACAGGGTCCCATTGCATTGCTACTAGATTTTGCATCAATCATAGCACCTCAAAAGTTTCTAAATaGACAACTGAGCCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: ANTGSHCIATRFCINHSTSKVSK*TTEPAN
Trigger: GTTTGCTGGCTCAGTTGTCAATTTAGAAACTTTTGA...GGTGCTATGATTGATGCAAAATCTAGTAGCAATGCAATGGGACCCTGTATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp TCATATTCAAGTAATGGCCTCGAAGCATCAGGACAGACATTTTCTCTGGTTTCACCAGTGATAACAGGTTaGAAATATGCAGCAGTTCAA +
Preference number: 5 (lower is better)
Translates to: SYSSNGLEASGQTFSLVSPVITG*KYAAVQ
Trigger: TTGAACTGCTGCATATTTCAAACCTGTTATCACTGG...TGAAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTACTTGAATATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS-3UTR CAA 90 bp TTAAACCCATCTGAAGTTGGTAATGATGACATTCCCAGTGAGGTAGATTCTTTATATCTTCTTCTATCTTaGCCTGAGCTTCAAGGTCAA +
Preference number: 5 (lower is better)
Translates to: LNPSEVGNDDIPSEVDSLYLLLS*PELQGQ
Trigger: TTGACCTTGAAGCTCAGGCAAAGATAGAAGAAGATA...TAAAGAATCTACCTCACTGGGAATGTCATCATTACCAACTTCAGATGGGTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320153.10
ENST00000480945.6
CDS-3UTR CAA 90 bp AAAGATATTCTTGGTCATGTGAAGCTTTTTGTTGTGCAACCTCATACTGTTCATTTTCCCTCACAGTTCTaGACATCTGCAAATGGAATT +
Preference number: 5 (lower is better)
Translates to: KDILGHVKLFVVQPHTVHFPSQF*TSANGI
Trigger: AATTCCATTTGCAGATGTCAAGAACTGTGAGGGAAA...ATGAACAGTATGAGGTTGCACAACAAAAAGCTTCACATGACCAAGAATATCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480945.6
CDS CAA 90 bp TCGGCTGCGGGGATGCCAGACTCGAGCTCGCACAGCGCGCGGAAGTaGTGCAGCTCGAAGTCGGCGTCGACCTGGAGGGAAAAGGTCACC +
Preference number: 6 (lower is better)
Translates to: SAAGMPDSSSHSARK*CSSKSASTWREKVT
Trigger: GGTGACCTTTTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCTGGCATCCCCGCAGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000480945.6
ENST00000486680.1
ENST00000546927.1
CDS CAA 72 bp GGGATGCCAGACTCGAGCTCGCACAGCGCGCGGAAGTaGTGCAGCTCGAAGTCGGCGTCGACCTGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: GMPDSSSHSARK*CSSKSASTWRE
Trigger: TTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCTGGCATCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000480945.6
ENST00000486680.1
ENST00000546927.1
CDS GCA 72 bp ATGCCAGACTCGAGCTCGCACAGCGCGCGGAAGTTGTaGAGCTCGAAGTCGGCGTCGACCTGGAGGGAAAAG +
Preference number: 6 (lower is better)
Translates to: MPDSSSHSARKL*SSKSASTWREK
Trigger: CTTTTCCCTCCAGGTCGACGCCGACTTCGAGCTGCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000480945.6
ENST00000486680.1
ENST00000546927.1
CDS GCA 72 bp TTTCCGCATAGACGATCTGGCTCTCGGCTGCGGGGATaGCAGACTCGAGCTCGCACAGCGCGCGGAAGTTGT +
Preference number: 6 (lower is better)
Translates to: FPHRRSGSRLRG*QTRARTARGSC
Trigger: ACAACTTCCGCGCGCTGTGCGAGCTCGAGTCTGGCATCCCCGCAGCCGAGAGCCAGATCGTCTATGCGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000480945.6
ENST00000486680.1
ENST00000546927.1
CDS GCA 72 bp TCAAAGGGATCAGCAGAAAACAGACGAATCCTTTCTTaGTCTCTCCGGGCTCGGTCCTGCTGCTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: SKGSAENRRILS*SLRARSCCCST
Trigger: GGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCTGTTTTCTGCTGATCCCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320153.10
ENST00000480945.6
ENST00000483899.1
ENST00000486680.1
CDS CAA 72 bp GTCAAAGGGATCAGCAGAAAACAGACGAATCCTTTCTaGCTCTCTCCGGGCTCGGTCCTGCTGCTGCTCCAC +
Preference number: 6 (lower is better)
Translates to: VKGISRKQTNPF*LSPGSVLLLLH
Trigger: GTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCTGTTTTCTGCTGATCCCTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320153.10
ENST00000480945.6
ENST00000483899.1
ENST00000486680.1
CDS CAA 90 bp AGCTTCAAGGTCAAAGGGATCAGCAGAAAACAGACGAATCCTTTCTaGCTCTCTCCGGGCTCGGTCCTGCTGCTGCTCCACCAGGACTCT +
Preference number: 6 (lower is better)
Translates to: SFKVKGISRKQTNPF*LSPGSVLLLLHQDS
Trigger: AGAGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAGCAAGAAAGGATTCGTCTGTTTTCTGCTGATCCCTTTGACCTTGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320153.10
ENST00000480945.6
ENST00000483899.1
ENST00000486680.1
CDS GCA 72 bp GGGGATGCTCAACCACCAGATGTCTTACTTGGGAACTaGACTGGAGGTCGAGGGTCTGCATTCTCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: GDAQPPDVLLGN*TGGRGSAFSFC
Trigger: ACAGAAGGAGAATGCAGACCCTCGACCTCCAGTGCAGTTCCCAAGTAAGACATCTGGTGGTTGAGCATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546927.1
CDS CAA 72 bp TTCTGCTGGGGGATGCTCAACCACCAGATGTCTTACTaGGGAACTGCACTGGAGGTCGAGGGTCTGCATTCT +
Preference number: 6 (lower is better)
Translates to: FCWGMLNHQMSY*GTALEVEGLHS
Trigger: AGAATGCAGACCCTCGACCTCCAGTGCAGTTCCCAAGTAAGACATCTGGTGGTTGAGCATCCCCCAGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546927.1
CDS TCA 72 bp ATCCAAAACTCTGAGGTGCTATGCTCTGCTACCTGCTaGTGGTTCTGCTGGGGGATGCTCAACCACCAGATG +
Preference number: 6 (lower is better)
Translates to: IQNSEVLCSATC*WFCWGMLNHQM
Trigger: CATCTGGTGGTTGAGCATCCCCCAGCAGAACCATCAGCAGGTAGCAGAGCATAGCACCTCAGAGTTTTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546927.1
CDS GCA 72 bp ATCCTTTCTTGCTCTCTCCGGGCTCGGTCCTGCTGCTaGTCCACCAGGACTCTAGAAAATTTCTCAAGGTCT +
Preference number: 6 (lower is better)
Translates to: ILSCSLRARSCC*STRTLENFSRS
Trigger: AGACCTTGAGAAATTTTCTAGAGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAGCAAGAAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320153.10
ENST00000480945.6
ENST00000483899.1
ENST00000486680.1
CDS GCA 72 bp TGGGGCCCACTCCAGCTGCAGTACACACACACTACATaGATCATGGCTTCTGACGCTCTGTGTGAATTAGGA +
Preference number: 6 (lower is better)
Translates to: WGPLQLQYTHTT*IMASDALCELG
Trigger: TCCTAATTCACACAGAGCGTCAGAAGCCATGATGCATGTAGTGTGTGTGTACTGCAGCTGGAGTGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548451.1
CDS GCA 72 bp TATGCTCTGCTACCTGCTGATGGTTCTGCTGGGGGATaGTCAACCACCAGATGTCTTACTTGGGAACTGCAC +
Preference number: 6 (lower is better)
Translates to: YALLPADGSAGG*STTRCLTWELH
Trigger: GTGCAGTTCCCAAGTAAGACATCTGGTGGTTGAGCATCCCCCAGCAGAACCATCAGCAGGTAGCAGAGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546927.1
CDS CCA 72 bp AGTCAAATCAGCCCATGTAATATGCAACCAGCCTTGTaGTCTCACCAGATGGTGGCTTCTGCTCAGTCCGGG +
Preference number: 6 (lower is better)
Translates to: SQISPCNMQPAL*SHQMVASAQSG
Trigger: CCCGGACTGAGCAGAAGCCACCATCTGGTGAGACCACAAGGCTGGTTGCATATTACATGGGCTGATTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486680.1
CDS TCA 72 bp GCCGGGGACTTGATGTGCCAGGCACAGCTATACTACTaGAATCTATTCGGGGTAAGTTTGGGAACTGCACTG +
Preference number: 6 (lower is better)
Translates to: AGDLMCQAQLYY*NLFGVSLGTAL
Trigger: CAGTGCAGTTCCCAAACTTACCCCGAATAGATTTCAGTAGTATAGCTGTGCCTGGCACATCAAGTCCCCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480945.6
ENST00000486680.1
CDS CAA 72 bp GAGAGTCAAATCAGCCCATGTAATATGCAACCAGCCTaGTGGTCTCACCAGATGGTGGCTTCTGCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: ESQISPCNMQPA*WSHQMVASAQS
Trigger: GGACTGAGCAGAAGCCACCATCTGGTGAGACCACAAGGCTGGTTGCATATTACATGGGCTGATTTGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486680.1
CDS TCA 72 bp TCAAGCCATAAGAAGCCAATGATCTGTGGTTGTCTGTaGGAGGTCTTTCCGCATAGACGATCTGGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: SSHKKPMICGCL*EVFPHRRSGSR
Trigger: CCGAGAGCCAGATCGTCTATGCGGAAAGACCTCTCACAGACAACCACAGATCATTGGCTTCTTATGGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000480945.6
ENST00000486680.1
ENST00000546927.1
CDS TCA 72 bp AACATATCTCGGAGCAAGGCTGGATTGTCCAAGCCCTaGGGAGATGAAGTTATTTCTCCAGGAGATGAGTGG +
Preference number: 6 (lower is better)
Translates to: NISRSKAGLSKP*GDEVISPGDEW
Trigger: CCACTCATCTCCTGGAGAAATAACTTCATCTCCTCAGGGCTTGGACAATCCAGCCTTGCTCCGAGATATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320153.10
ENST00000480945.6
ENST00000486680.1
CDS TCA 72 bp TCACTGTCCTTGCTTGAGCTCCATGCCCGACAATTCTaGTTCATCAGATTTGGGAGAAGAGTCCAAGCATCT +
Preference number: 6 (lower is better)
Translates to: SLSLLELHARQF*FIRFGRRVQAS
Trigger: AGATGCTTGGACTCTTCTCCCAAATCTGATGAATCAGAATTGTCGGGCATGGAGCTCAAGCAAGGACAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486680.1
CDS TCA 72 bp CCAAACTGCTGCGGATACAGACTGTCAGATCACAGATaGCAACTGGATGGAAGGCTTAACATGGTGTCTATA +
Preference number: 6 (lower is better)
Translates to: PNCCGYRLSDHR*QLDGRLNMVSI
Trigger: TATAGACACCATGTTAAGCCTTCCATCCAGTTGTCATCTGTGATCTGACAGTCTGTATCCGCAGCAGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548451.1
CDS GCA 72 bp ACCTCCAAGCAGATGCCCAACCAATGTCAGATAACCTaGAGTCTGGGAAATCTGGAGTCTCTAAGTTTTGTT +
Preference number: 6 (lower is better)
Translates to: TSKQMPNQCQIT*SLGNLESLSFV
Trigger: AACAAAACTTAGAGACTCCAGATTTCCCAGACTGCAGGTTATCTGACATTGGTTGGGCATCTGCTTGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486680.1
CDS TCA 72 bp CAATACACACAGCAATCTGCATCCTCTGCTGATTTTTaGAGGGCTTCTGCTAATTCTTGGTCTGCAATCTCC +
Preference number: 6 (lower is better)
Translates to: QYTQQSASSADF*RASANSWSAIS
Trigger: GGAGATTGCAGACCAAGAATTAGCAGAAGCCCTTCAAAAATCAGCAGAGGATGCAGATTGCTGTGTGTATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548451.1
CDS TCA 72 bp GGGAAAAGGCAGAGTCAGGATCTGTATTCTGTAGTCTaGATCCAAAGCGAATCCAAAACTCTGAGGTGCTAT +
Preference number: 6 (lower is better)
Translates to: GKRQSQDLYSVV*IQSESKTLRCY
Trigger: ATAGCACCTCAGAGTTTTGGATTCGCTTTGGATTCAGACTACAGAATACAGATCCTGACTCTGCCTTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546927.1
CDS GCA 72 bp AAGCAAACTTGGGTTAACAATGCAAACCACACAGCATaGAGGGTTATAGTTTCCGTTCTTTTGCCATCTTTA +
Preference number: 6 (lower is better)
Translates to: KQTWVNNANHTA*RVIVSVLLPSL
Trigger: TAAAGATGGCAAAAGAACGGAAACTATAACCCTGCATGCTGTGTGGTTTGCATTGTTAACCCAAGTTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548451.1
CDS CAA 72 bp ACTGGTAGATTCCAAGTTGAGGGATGTTTCTGTAGTTaGGACATCCAAAATATTTGTTGGTTGCTTCCATTC +
Preference number: 6 (lower is better)
Translates to: TGRFQVEGCFCS*DIQNICWLLPF
Trigger: GAATGGAAGCAACCAACAAATATTTTGGATGTCCAAACTACAGAAACATCCCTCAACTTGGAATCTACCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548451.1
CDS CAA 72 bp ATAGAAGAGGAAACCAATTTAGAGACATTAAAATACTaGTTCAAGGTTACACGGCAGGGAAAAGGCAGAGTC +
Preference number: 6 (lower is better)
Translates to: IEEETNLETLKY*FKVTRQGKGRV
Trigger: GACTCTGCCTTTTCCCTGCCGTGTAACCTTGAACAAGTATTTTAATGTCTCTAAATTGGTTTCCTCTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546927.1
CDS CAA 90 bp AAATCAGGAACTGGTAGATTCCAAGTTGAGGGATGTTTCTGTAGTTaGGACATCCAAAATATTTGTTGGTTGCTTCCATTCTCTCACAAT +
Preference number: 6 (lower is better)
Translates to: KSGTGRFQVEGCFCS*DIQNICWLLPFSHN
Trigger: ATTGTGAGAGAATGGAAGCAACCAACAAATATTTTGGATGTCCAAACTACAGAAACATCCCTCAACTTGGAATCTACCAGTTCCTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548451.1