RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDHD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000085788

Ensembl transcript IDs: ENST00000397166.7, ENST00000517385.5, ENST00000519857.5, ENST00000520176.5, ENST00000520272.6, ENST00000524545.1, ENST00000526144.1, ENST00000526237.5, ENST00000526370.1, ENST00000527415.5, ENST00000527834.5, ENST00000528148.1, ENST00000528358.5, ENST00000528504.5, ENST00000528613.1, ENST00000529642.1, ENST00000529845.5, ENST00000529872.1, ENST00000531344.1, ENST00000532222.5, ENST00000533100.5

Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACTCCTCTCTTCACAGTTCTTGGTCGACCCTGCTCCGTGGGTGTTaGACCCCAATCATCAGACCCTGCAACTGGCTGGTAATGCACCAT +
Preference number: 1 (lower is better)
Translates to: NSSLHSSWSTLLRGC*TPIIRPCNWLVMHH
Trigger: ATGGTGCATTACCAGCCAGTTGCAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
3UTR GCA 90 bp ACAGAGATGTTCTCAACTCCTCTCTTCACAGTTCTTGGTCGACCCTaGTCCGTGGGTGTTGAACCCCAATCATCAGACCCTGCAACTGGC +
Preference number: 1 (lower is better)
Translates to: TEMFSTPLFTVLGRP*SVGVEPQSSDPATG
Trigger: GCCAGTTGCAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGAGAACATCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
3UTR CCA 90 bp TGTTCTCAACTCCTCTCTTCACAGTTCTTGGTCGACCCTGCTCCGTaGGTGTTGAACCCCAATCATCAGACCCTGCAACTGGCTGGTAAT +
Preference number: 1 (lower is better)
Translates to: CSQLLSSQFLVDPAP*VLNPNHQTLQLAGN
Trigger: ATTACCAGCCAGTTGCAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
3UTR TCA 90 bp CATTCATTTCCAAAGAGGAAGATTATCTTCCAAAGACCCCAGTGGTaGGTAAGTGGCAGGCAACATGCAGGAAATGACGCAGCTGAGGAG +
Preference number: 1 (lower is better)
Translates to: HSFPKRKIIFQRPQW*VSGRQHAGNDAAEE
Trigger: CTCCTCAGCTGCGTCATTTCCTGCATGTTGCCTGCCACTTACTCACCACTGGGGTCTTTGGAAGATAATCTTCCTCTTTGGAAATGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
3UTR TCA 90 bp TACTTAGCACTAGACTATAAGCAGATGACAAAGAAAGGCCAGGCCTaGCCTATACCCCAACCTTACCTCTACAATCTCCATGGTGACAGT +
Preference number: 1 (lower is better)
Translates to: YLALDYKQMTKKGQA*PIPQPYLYNLHGDS
Trigger: ACTGTCACCATGGAGATTGTAGAGGTAAGGTTGGGGTATAGGTCAGGCCTGGCCTTTCTTTGTCATCTGCTTATAGTCTAGTGCTAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR CCA 90 bp ATCTACATCCACACCAGTAGAATGCAAAGGACTGTGCCAGTTGACTaGAAGAAATTCTACCCTCCCAATCTGCTGATTTTCTTGGGCTTT +
Preference number: 1 (lower is better)
Translates to: IYIHTSRMQRTVPVD*KKFYPPNLLIFLGF
Trigger: AAAGCCCAAGAAAATCAGCAGATTGGGAGGGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTTTGCATTCTACTGGTGTGGATGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527415.5
3UTR GCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTaGTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTT +
Preference number: 1 (lower is better)
Translates to: FLSEQVKHFPLAKPT*STNAARAKSLLNML
Trigger: AAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR CCA 90 bp AAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTaGAATCTGAGAGCAAGTATAAAGGATTATCATAAAGAGAACTAC +
Preference number: 1 (lower is better)
Translates to: KPQLACLCHSINRGL*NLRASIKDYHKENY
Trigger: GTAGTTCTCTTTATGATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR GCA 90 bp ACATTTCTTAATACAAAGAGTGGTTTATCTGGCTATCCAGGGCTATaGTGTCCATCTTTGGTTATAGGGACTCCCTCTGCTTATCCTTTG +
Preference number: 1 (lower is better)
Translates to: TFLNTKSGLSGYPGL*CPSLVIGTPSAYPL
Trigger: CAAAGGATAAGCAGAGGGAGTCCCTATAACCAAAGATGGACAGCATAGCCCTGGATAGCCAGATAAACCACTCTTTGTATTAAGAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR TCA 90 bp GTCAACTTTAGACTCTTACAGCAGCTCAAACAGTTGCAAAAACAATaGACATCAGTGATTTCTGGCAATAAGTCTGTCAGTTCTAAGAGA +
Preference number: 1 (lower is better)
Translates to: VNFRLLQQLKQLQKQ*TSVISGNKSVSSKR
Trigger: TCTCTTAGAACTGACAGACTTATTGCCAGAAATCACTGATGTTCATTGTTTTTGCAACTGTTTGAGCTGCTGTAAGAGTCTAAAGTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR TCA 90 bp AAAGAGGATACACAATACTACCTTAGCTCAAGTAGAAATGGCAGGTaGCAAATTCTGTTTCACCATAAAGGCACCACTAAAAGGTTTTAT +
Preference number: 1 (lower is better)
Translates to: KEDTQYYLSSSRNGR*QILFHHKGTTKRFY
Trigger: ATAAAACCTTTTAGTGGTGCCTTTATGGTGAAACAGAATTTGTCACCTGCCATTTCTACTTGAGCTAAGGTAGTATTGTGTATCCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR CAA 90 bp CAACTCCTCTCTTCACAGTTCTTGGTCGACCCTGCTCCGTGGGTGTaGAACCCCAATCATCAGACCCTGCAACTGGCTGGTAATGCACCA +
Preference number: 2 (lower is better)
Translates to: QLLSSQFLVDPAPWV*NPNHQTLQLAGNAP
Trigger: TGGTGCATTACCAGCCAGTTGCAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
3UTR-3UTR CCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCCAGTGGTGAGTAAGTaGCAGGCAACATGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSPVVSK*QATCRK
Trigger: TTTCCTGCATGTTGCCTGCCACTTACTCACCACTGG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR GCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGCTAGCCAAACCTACCTaGTCAACCAATGCTGCCCGT +
Preference number: 2 (lower is better)
Translates to: NNKPQLACLCHSINRGLWLAKPT*STNAAR
Trigger: ACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAG...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR CCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGCCAGTGGTGAGTAAGTaGCAGGCAACATGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: NNKPQLACLCHSINRGLWPVVSK*QATCRK
Trigger: TTTCCTGCATGTTGCCTGCCACTTACTCACCACTGG...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR CCA 90 bp CCACACTGTACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGATCAGACCCTGCAACTaGCTGGTAATGCACCATAAG +
Preference number: 2 (lower is better)
Translates to: PHCTMLRKRRSQAGPIPWIRPCN*LVMHHK
Trigger: CTTATGGTGCATTACCAGCCAGTTGCAGGGTCTGAT...CCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGTACAGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526237.5
3UTR CAA 90 bp AATGAATGTCAACAGAGATGTTCTCAACTCCTCTCTTCACAGTTCTaGGTCGACCCTGCTCCGTGGGTGTTGAACCCCAATCATCAGACC +
Preference number: 2 (lower is better)
Translates to: NECQQRCSQLLSSQF*VDPAPWVLNPNHQT
Trigger: GGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGAGAACATCTCTGTTGACATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
3UTR-3UTR GCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGCTAGCCAAACCTACCTaGTCAACCAATGCTGCCCGT +
Preference number: 2 (lower is better)
Translates to: INNKPQLACLCHSINRGLLAKPT*STNAAR
Trigger: ACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAG...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR CCA 90 bp TTAATGCTGGGCAGGGTTATTCGCTGCAGATCTACATCCACACCAGTAGAATGCACTGTGCCAGTTGACTaGAAGAAATTCTACCCTCCC +
Preference number: 2 (lower is better)
Translates to: LMLGRVIRCRSTSTPVECTVPVD*KKFYPP
Trigger: GGGAGGGTAGAATTTCTTCCAGTCAACTGGCACAGT...GCATTCTACTGGTGTGGATGTAGATCTGCAGCGAATAACCCTGCCCAGCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527415.5
3UTR-3UTR TCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGCTTTTCCATGTCCACTaGGACTTAGCCTTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWLFHVH*DLAFSS
Trigger: TGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAG...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATTACCTGCTCAACCAATaGTGCCCGTGCCAAGAGCCT +
Preference number: 2 (lower is better)
Translates to: CHSINRGLWNLRASIKDYYLLNQ*CPCQEP
Trigger: AGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR TCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATCAAAGACCCCAGTGGTaGGTAAGTGGCAGGCAACAT +
Preference number: 2 (lower is better)
Translates to: CHSINRGLWNLRASIKDYQRPQW*VSGRQH
Trigger: ATGTTGCCTGCCACTTACTCACCACTGGGGTCTTTG...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR TCA 90 bp ACCACACTGTACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGAAAGGTTCTCCACAATaGATGTCAACAGAGATGTTC +
Preference number: 2 (lower is better)
Translates to: TTLYNASKAEITSWSNPMKGSPQ*MSTEMF
Trigger: GAACATCTCTGTTGACATTCATTGTGGAGAACCTTT...CATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGTACAGTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526237.5
3UTR-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATCTGCTCAACCAATGCTaGCCGTGCCAAGAGCCTTTT +
Preference number: 2 (lower is better)
Translates to: CHSINRGLWNLRASIKDYLLNQC*PCQEPF
Trigger: AAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAG...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATCTAGCCAAACCTACCTaGTCAACCAATGCTGCCCGT +
Preference number: 2 (lower is better)
Translates to: CHSINRGLWNLRASIKDYLAKPT*STNAAR
Trigger: ACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAG...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR GCA 90 bp ACTGTACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTAGAATGCAAAGGACTGTaGCAGTTGACTGGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: TVQCFESGDHKLVQSHGLECKGL*QLTGRN
Trigger: ATTTCTTCCAGTCAACTGGCACAGTCCTTTGCATTC...TAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527415.5
3UTR-3UTR TCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGCAGTTGCAAAAACAATaGACATCAGTGATTTCTGGC +
Preference number: 2 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWQLQKQ*TSVISG
Trigger: GCCAGAAATCACTGATGTTCATTGTTTTTGCAACTG...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR CCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATCCAGTGGTGAGTAAGTaGCAGGCAACATGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: CHSINRGLWNLRASIKDYPVVSK*QATCRK
Trigger: TTTCCTGCATGTTGCCTGCCACTTACTCACCACTGG...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR GCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGAAGTGTACTCCAAAATaGCTTCTGAATCTCAAGAAT +
Preference number: 2 (lower is better)
Translates to: NNKPQLACLCHSINRGLWKCTPK*LLNLKN
Trigger: ATTCTTGAGATTCAGAAGGCATTTTGGAGTACACTT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACAAACAGGTGGATTTTCTaGGGAAGGATCCCTCAATGT +
Preference number: 2 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTNRWIF*GRIPQC
Trigger: ACATTGAGGGATCCTTCCCCAGAAAATCCACCTGTT...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR CCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGATGCTTTGTGGATTATaGATACCTAAGAAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: NNKPQLACLCHSINRGLWMLCGL*IPKKER
Trigger: TCTTTCCTTCTTAGGTATCCATAATCCACAAAGCAT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR TCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATCTTTTCCATGTCCACTaGGACTTAGCCTTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: CHSINRGLWNLRASIKDYLFHVH*DLAFSS
Trigger: TGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAG...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATAACCAATGCTGCCCGTaGCAAGAGCCTTTTAAATAT +
Preference number: 2 (lower is better)
Translates to: CHSINRGLWNLRASIKDYNQCCP*QEPFKY
Trigger: ATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTT...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR TCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATCAGTTGCAAAAACAATaGACATCAGTGATTTCTGGC +
Preference number: 2 (lower is better)
Translates to: CHSINRGLWNLRASIKDYQLQKQ*TSVISG
Trigger: GCCAGAAATCACTGATGTTCATTGTTTTTGCAACTG...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR TCA 90 bp TCTGTAGAAAAAGTGTGTATATTCGGTTCATTTCAGAAGCAACTGTGTCCACAAACCCTCCCAATCTGCTaGTTTTCTTGGGCTTTCTTA +
Preference number: 2 (lower is better)
Translates to: SVEKVCIFGSFQKQLCPQTLPIC*FSWAFL
Trigger: TAAGAAAGCCCAAGAAAATCAGCAGATTGGGAGGGT...TTGTGGACACAGTTGCTTCTGAAATGAACCGAATATACACACTTTTTCTACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527415.5
3UTR-3UTR CCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTAACAGGTGGATTTTCTaGGGAAGGATCCCTCAATGT +
Preference number: 2 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFNRWIF*GRIPQC
Trigger: ACATTGAGGGATCCTTCCCCAGAAAATCCACCTGTT...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
3UTR-3UTR GCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCAAGTGTACTCCAAAATaGCTTCTGAATCTCAAGAAT +
Preference number: 2 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTKCTPK*LLNLKN
Trigger: ATTCTTGAGATTCAGAAGGCATTTTGGAGTACACTT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATAAGTGTACTCCAAAATaGCTTCTGAATCTCAAGAAT +
Preference number: 2 (lower is better)
Translates to: CHSINRGLWNLRASIKDYKCTPK*LLNLKN
Trigger: ATTCTTGAGATTCAGAAGGCATTTTGGAGTACACTT...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR TCA 72 bp CTTCACAGTTCTTGGTCGACCCTGCTCCGTGGGTGTTaGACCCCAATCATCAGACCCTGCAACTGGCTGGTA +
Preference number: 3 (lower is better)
Translates to: LHSSWSTLLRGC*TPIIRPCNWLV
Trigger: TACCAGCCAGTTGCAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
3UTR CCA 72 bp CTCCTCTCTTCACAGTTCTTGGTCGACCCTGCTCCGTaGGTGTTGAACCCCAATCATCAGACCCTGCAACTG +
Preference number: 3 (lower is better)
Translates to: LLSSQFLVDPAP*VLNPNHQTLQL
Trigger: CAGTTGCAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
3UTR GCA 72 bp TTCTCAACTCCTCTCTTCACAGTTCTTGGTCGACCCTaGTCCGTGGGTGTTGAACCCCAATCATCAGACCCT +
Preference number: 3 (lower is better)
Translates to: FSTPLFTVLGRP*SVGVEPQSSDP
Trigger: AGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
3UTR GCA 72 bp TTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTaGCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGG +
Preference number: 3 (lower is better)
Translates to: FPPSQTYLLNQC*PCQEPFKYALW
Trigger: CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR GCA 72 bp ACATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATaGTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTG +
Preference number: 3 (lower is better)
Translates to: TFPPSQTYLLNQ*CPCQEPFKYAL
Trigger: CAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR GCA 72 bp GAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTaGTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTA +
Preference number: 3 (lower is better)
Translates to: EQVKHFPLAKPT*STNAARAKSLL
Trigger: TAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR-3UTR CAA 90 bp ACACTGTACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACAAAGGACTGTGCCAGTaGACTGGAAGAAATTCTACC +
Preference number: 3 (lower is better)
Translates to: TLYNASKAEITSWSNPMDKGLCQ*TGRNST
Trigger: GGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTTT...GTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGTACAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527415.5
3UTR CCA 72 bp GAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTaGGGAAGGATCCCTCAATGTCCGTCTAGGGAAGAA +
Preference number: 3 (lower is better)
Translates to: ERKIAATNRWIF*GRIPQCPSREE
Trigger: TTCTTCCCTAGACGGACATTGAGGGATCCTTCCCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528613.1
3UTR GCA 72 bp AATACAAAGAGTGGTTTATCTGGCTATCCAGGGCTATaGTGTCCATCTTTGGTTATAGGGACTCCCTCTGCT +
Preference number: 3 (lower is better)
Translates to: NTKSGLSGYPGL*CPSLVIGTPSA
Trigger: AGCAGAGGGAGTCCCTATAACCAAAGATGGACAGCATAGCCCTGGATAGCCAGATAAACCACTCTTTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR GCA 72 bp AGATCTACATCCACACCAGTAGAATGCAAAGGACTGTaGCAGTTGACTGGAAGAAATTCTACCCTCCCAATC +
Preference number: 3 (lower is better)
Translates to: RSTSTPVECKGL*QLTGRNSTLPI
Trigger: GATTGGGAGGGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTTTGCATTCTACTGGTGTGGATGTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527415.5
3UTR-3UTR CAA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACACTGAGGAGAGGAAAATaGCAGCAACAAACAGGTGGA +
Preference number: 3 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTLRRGK*QQQTGG
Trigger: TCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAG...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR GCA 72 bp GTTATTCGCTGCAGATCTACATCCACACCAGTAGAATaGAAAGGACTGTGCCAGTTGACTGGAAGAAATTCT +
Preference number: 3 (lower is better)
Translates to: VIRCRSTSTPVE*KGLCQLTGRNS
Trigger: AGAATTTCTTCCAGTCAACTGGCACAGTCCTTTGCATTCTACTGGTGTGGATGTAGATCTGCAGCGAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527415.5
3UTR GCA 72 bp AAATTTATAAACAATAAACCACAGCTCGCCTGCCTTTaGCACTCTATAAACAGAGGCCTGTGGAATCTGAGA +
Preference number: 3 (lower is better)
Translates to: KFINNKPQLACL*HSINRGLWNLR
Trigger: TCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTATAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR GCA 72 bp GCTATGCTGTCCATCTTTGGTTATAGGGACTCCCTCTaGTTATCCTTTGGTTTACTCTTAAATAGCACCTAT +
Preference number: 3 (lower is better)
Translates to: AMLSIFGYRDSL*LSFGLLLNSTY
Trigger: ATAGGTGCTATTTAAGAGTAAACCAAAGGATAAGCAGAGGGAGTCCCTATAACCAAAGATGGACAGCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR TCA 72 bp AACCTAAACTATGACCAGCAATGGATACACCCCCTTTaGAATCAGGGTTCCTCTGTAGAAAAAGTGTGTATA +
Preference number: 3 (lower is better)
Translates to: NLNYDQQWIHPL*NQGSSVEKVCI
Trigger: TATACACACTTTTTCTACAGAGGAACCCTGATTTCAAAGGGGGTGTATCCATTGCTGGTCATAGTTTAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527415.5
3UTR TCA 72 bp ACACAATACTACCTTAGCTCAAGTAGAAATGGCAGGTaGCAAATTCTGTTTCACCATAAAGGCACCACTAAA +
Preference number: 3 (lower is better)
Translates to: TQYYLSSSRNGR*QILFHHKGTTK
Trigger: TTTAGTGGTGCCTTTATGGTGAAACAGAATTTGTCACCTGCCATTTCTACTTGAGCTAAGGTAGTATTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR TCA 72 bp TTCTTCAAATCTTCCTCTAGTGTAGGTGTATCTCCTTaGTCCATTACAATATTTAGCGAATCCTTTTCACTG +
Preference number: 3 (lower is better)
Translates to: FFKSSSSVGVSP*SITIFSESFSL
Trigger: CAGTGAAAAGGATTCGCTAAATATTGTAATGGATCAAGGAGATACACCTACACTAGAGGAAGATTTGAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR CCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGCCACGGCGCTCCCAGTaGGCGAGTAGCGGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWPRRSQ*ASSGPG
Trigger: TCCGGGCCCGCTACTCGCCCACTGGGAGCGCCGTGG...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397166.7
CDS-3UTR TCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCGCTTCCTGCCTTTATaGTGTGGGATCAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSRFLPL*CGISIG
Trigger: GCCAATGCTGATCCCACATCATAAAGGCAGGAAGCG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCAAAGACCCCAGTGGTaGGTAAGTGGCAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSQRPQW*VSGRQH
Trigger: ATGTTGCCTGCCACTTACTCACCACTGGGGTCTTTG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp GACCCTGCTCCGTGGGTGTTGAACCCCAATCATCAGACCCTGCAACTGGCTGGTCCAATCATCAGACCCTaGAACTGGCTGGTAATGCAC +
Preference number: 4 (lower is better)
Translates to: DPAPWVLNPNHQTLQLAGPIIRP*NWLVMH
Trigger: GTGCATTACCAGCCAGTTGCAGGGTCTGATGATTGG...ACCAGCCAGTTGCAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR GCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTGCTCAACCAATGCTaGCCGTGCCAAGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSLLNQC*PCQEPF
Trigger: AAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTAGCCAAACCTACCTaGTCAACCAATGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSLAKPT*STNAAR
Trigger: ACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGCCGGGTACGGTGGCATaGGCCTGTCCCAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWPGTVA*ACPSYW
Trigger: CCAGTAGCTGGGACAGGCGCATGCCACCGTACCCGG...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517385.5
3UTR CAA 72 bp TCTTCACAGTTCTTGGTCGACCCTGCTCCGTGGGTGTaGAACCCCAATCATCAGACCCTGCAACTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSQFLVDPAPWV*NPNHQTLQLAG
Trigger: ACCAGCCAGTTGCAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR TCA 90 bp ATGTTCTCAACTCCTCTCTTCACAGTTCTTGGTCGACCCTGCTCCGTGGGTGTTCTGCTCCGTGGGTGTTaGACCCCAATCATCAGACCC +
Preference number: 4 (lower is better)
Translates to: MFSTPLFTVLGRPCSVGVLLRGC*TPIIRP
Trigger: GGGTCTGATGATTGGGGTTCAACACCCACGGAGCAG...AACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGAGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR GCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCAGACACCTGCCCAATaGCAACATCCAGATAGTCAC +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSQTPAQ*QHPDSH
Trigger: GTGACTATCTGGATGTTGGCATTGGGCAGGTGTCTG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGCAGCAGGGCAGCCAGTaGAGACCACAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWQQGSQ*RPQGSQ
Trigger: CTGTGAACCCTGTGGTCTGCACTGGCTGCCCTGCTG...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520272.6
CDS-3UTR CCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGAGGAGGACACTGCATaGCCCGGCCGCGGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWEEDTA*PGRGLY
Trigger: GTAAAGGCCGCGGCCGGGCCATGCAGTGTCCTCCTC...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397166.7
CDS-3UTR CCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCGGTCCATACTCATCCTaGTCAAGCCCTCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSGPYSS*SSPLSV
Trigger: AACTGAGAGAGGGCTTGACCAGGATGAGTATGGACC...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCTGGATACACCCCCTTTaGAATCAGGGTTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSWIHPL*NQGSSV
Trigger: TACAGAGGAACCCTGATTTCAAAGGGGGTGTATCCA...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCTGCTCCTGTTGTGACTaGACTGATGACATTTCGCTC +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSCSCCD*TDDISL
Trigger: GAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCA...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp TTCTTGGTCGACCCTGCTCCGTGGGTGTTGAACCCCAATCATCAGACCCTGCAATCTGACTGGGACAACTaGTCCTGTTGTGACTGCACT +
Preference number: 4 (lower is better)
Translates to: FLVDPAPWVLNPNHQTLQSDWDN*SCCDCT
Trigger: AGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGA...TTGCAGGGTCTGATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR GCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCAAACCACAGCTCGCCTaGCTTTGCCACTCTATAAAC +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSKPQLA*LCHSIN
Trigger: GTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTT...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp TCAACTCCTCTCTTCACAGTTCTTGGTCGACCCTGCTCCGTGGGTGTTGAACCCCCAATGGGGAGAAACTaGTTCATACAAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: STPLFTVLGRPCSVGVEPPMGRN*FIQAAS
Trigger: GCTGGCAGCTTGTATGAACCAGTTTCTCCCCATTGG...GGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR TCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTTGCCAGGCGAAAAGGTaGGGCGGCGGGGAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFCQAKR*GGGERG
Trigger: GCCGCGCTCCCCGCCGCCTCACCTTTTCGCCTGGCA...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000397166.7
CDS-3UTR TCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCGTGAATCCTCAGAGTTaGAAGGAATCCATGTCTCCT +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSVNPQS*KESMSP
Trigger: AGGAGACATGGATTCCTTTCAACTCTGAGGATTCAC...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTCCATGTCCACTaGGACTTAGCCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSLFHVH*DLAFSS
Trigger: TGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGGTTCTTGGTCGACCCTaGTCCGTGGGTGTTGAACCC +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGVLGRP*SVGVEP
Trigger: GGGTTCAACACCCACGGAGCAGGGTCGACCAAGAAC...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp ACCCCAATCATCAGACCCTGCAACTGGCTGGTAATGCACCATAAGCTTTGGATTGTTCTTGGTCGACCCTaGTCCGTGGGTGTTGAACCC +
Preference number: 4 (lower is better)
Translates to: TPIIRPCNWLVMHHKLWIVLGRP*SVGVEP
Trigger: GGGTTCAACACCCACGGAGCAGGGTCGACCAAGAAC...AATCCAAAGCTTATGGTGCATTACCAGCCAGTTGCAGGGTCTGATGATTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR GCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCAGGGATAAAGACCACTaGTGTCTAAGGAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSRDKDH*CLRNGF
Trigger: GAAGCCATTCCTTAGACAGCAGTGGTCTTTATCCCT...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCGGCTATCCAGGGCTATaGTGTCCATCTTTGGTTATA +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSGYPGL*CPSLVI
Trigger: TATAACCAAAGATGGACAGCATAGCCCTGGATAGCC...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp CTCCACAATGAATGTCAACAGAGATGTTCTCAACTCCTCTCTTCACAGTTCTTGGAGGAGGACACTGCATaGCCCGGCCGCGGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: LHNECQQRCSQLLSSQFLEEDTA*PGRGLY
Trigger: GTAAAGGCCGCGGCCGGGCCATGCAGTGTCCTCCTC...CAAGAACTGTGAAGAGAGGAGTTGAGAACATCTCTGTTGACATTCATTGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR CCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGGTCGACCCTGCTCCGTaGGTGTTGAACCCCAATCAT +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWVDPAP*VLNPNH
Trigger: ATGATTGGGGTTCAACACCCACGGAGCAGGGTCGAC...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp CACACTGTACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGATCTCTTCACAGTTCTTaGTCGACCCTGCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: HTVQCFESGDHKLVQSHGSLHSS*STLLRG
Trigger: CCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGA...TCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGTACAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR CCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTCAAATTCCACTCCTaGGACCACCATTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSLKFHS*DHHWFN
Trigger: ATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp TCAACTCCTCTCTTCACAGTTCTTGGTCGACCCTGCTCCGTGGGTGTTGAACCCGTGAATCCTCAGAGTTaGAAGGAATCCATGTCTCCT +
Preference number: 4 (lower is better)
Translates to: STPLFTVLGRPCSVGVEPVNPQS*KESMSP
Trigger: AGGAGACATGGATTCCTTTCAACTCTGAGGATTCAC...GGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR TCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGCGCTTCCTGCCTTTATaGTGTGGGATCAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWRFLPL*CGISIG
Trigger: GCCAATGCTGATCCCACATCATAAAGGCAGGAAGCG...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTGGTTCATACAAGCTaGCAGCATCCATGTCTATTA +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSLVHTS*QHPCLL
Trigger: TAATAGACATGGATGCTGGCAGCTTGTATGAACCAG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp GCGGTTAATGCTGGGCAGGGTTATTCGCTGCAGATCTACATCCACACCAGTAGAGTGTCATTGGTGAAGTaGCTGAGGCGGTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: AVNAGQGYSLQIYIHTSRVSLVK*LRRLML
Trigger: CAGCATTAACCGCCTCAGGCACTTCACCAATGACAC...TCTACTGGTGTGGATGTAGATCTGCAGCGAATAACCCTGCCCAGCATTAACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGTACCTGCTCAACCAATaGTGCCCGTGCCAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGYLLNQ*CPCQEP
Trigger: AGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCTATAGGGACTCCCTCTaGTTATCCTTTGGTTTACTC +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSYRDSL*LSFGLL
Trigger: GAGTAAACCAAAGGATAAGCAGAGGGAGTCCCTATA...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCGAAACCTTTGCACGTTaGAAATCTGTAGTTGGGATC +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSETFAR*KSVVGI
Trigger: GATCCCAACTACAGATTTCCAACGTGCAAAGGTTTC...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
3UTR CAA 72 bp CAACAGAGATGTTCTCAACTCCTCTCTTCACAGTTCTaGGTCGACCCTGCTCCGTGGGTGTTGAACCCCAAT +
Preference number: 4 (lower is better)
Translates to: QQRCSQLLSSQF*VDPAPWVLNPN
Trigger: ATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGAGAACATCTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR TCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGATCCTCTCCCCCAAATaGACATCATATCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWILSPK*TSYLPP
Trigger: TGGGGGCAGATATGATGTTCATTTGGGGGAGAGGAT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGCAAAGACCCCAGTGGTaGGTAAGTGGCAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWQRPQW*VSGRQH
Trigger: ATGTTGCCTGCCACTTACTCACCACTGGGGTCTTTG...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGCAAAGACCCCAGTGGTaGGTAAGTGGCAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGQRPQW*VSGRQH
Trigger: ATGTTGCCTGCCACTTACTCACCACTGGGGTCTTTG...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR TCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGAAGAAAGGCCAGGCCTaGCCTATACCCCAACCTTAC +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWKKGQA*PIPQPY
Trigger: GTAAGGTTGGGGTATAGGTCAGGCCTGGCCTTTCTT...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGAGTTCAAGACCAGTCTaGCCAACACCCTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWSSRPV*PTPCLY
Trigger: GTAGAGACAGGGTGTTGGTCAGACTGGTCTTGAACT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517385.5
CDS-3UTR GCA 90 bp TCAACTCCTCTCTTCACAGTTCTTGGTCGACCCTGCTCCGTGGGTGTTGAACCCCTGGTTCATACAAGCTaGCAGCATCCATGTCTATTA +
Preference number: 4 (lower is better)
Translates to: STPLFTVLGRPCSVGVEPLVHTS*QHPCLL
Trigger: TAATAGACATGGATGCTGGCAGCTTGTATGAACCAG...GGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGCAGCTCGCCTGCCTTTaGCACTCTATAAACAGAGGC +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGQLACL*HSINRG
Trigger: GCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTG...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGGGAGATGGATCTGACTaGGACAACTGCTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWGDGSD*DNCSCC
Trigger: ACAACAGGAGCAGTTGTCCCAGTCAGATCCATCTCC...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGTCGACCCTGCTCCGTaGGTGTTGAACCCCAATCAT +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWVDPAP*VLNPNH
Trigger: ATGATTGGGGTTCAACACCCACGGAGCAGGGTCGAC...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCCTGCTCCGTGGGTGTTaGACCCCAATCATCAGACCC +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTLLRGC*TPIIRP
Trigger: GGGTCTGATGATTGGGGTTCAACACCCACGGAGCAG...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp TCAACTCCTCTCTTCACAGTTCTTGGTCGACCCTGCTCCGTGGGTGTTGAACCCAAAGGTTCTCCACAATaGATGTCAACAGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: STPLFTVLGRPCSVGVEPKGSPQ*MSTEMF
Trigger: GAACATCTCTGTTGACATTCATTGTGGAGAACCTTT...GGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR TCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGAGCGAACCTAAACTATaGCCAGCAATGGATACACCC +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWSEPKL*PAMDTP
Trigger: GGGTGTATCCATTGCTGGTCATAGTTTAGGTTCGCT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCAAGAATTCAGAGAGCTaGAGTTTCTTCAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSKNSES*SFFKSS
Trigger: GGAAGATTTGAAGAAACTTCAGCTCTCTGAATTCTT...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGCGCTTCCTGCCTTTATaGTGTGGGATCAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWRFLPL*CGISIG
Trigger: GCCAATGCTGATCCCACATCATAAAGGCAGGAAGCG...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR GCA 90 bp CTGTACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTACTCCACACCAGTAGAATaGAAAGGACTGTGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LYNASKAEITSWSNPMDYSTPVE*KGLCQL
Trigger: CAACTGGCACAGTCCTTTGCATTCTACTGGTGTGGA...GTAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGTACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGCAGACACCTGCCCAATaGCAACATCCAGATAGTCAC +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGQTPAQ*QHPDSH
Trigger: GTGACTATCTGGATGTTGGCATTGGGCAGGTGTCTG...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR GCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGCTGCTCAACCAATGCTaGCCGTGCCAAGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLLLNQC*PCQEPF
Trigger: AAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAG...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGCTAGCCAAACCTACCTaGTCAACCAATGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWLAKPT*STNAAR
Trigger: ACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAG...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp CGCTGCAGATCTACATCCACACCAGTAGAATGCAAAGGACTGTGCCAGTTGACTACTGTGCCAGTTGACTaGAAGAAATTCTACCCTCCC +
Preference number: 4 (lower is better)
Translates to: RCRSTSTPVECKGLCQLTTVPVD*KKFYPP
Trigger: GGGAGGGTAGAATTTCTTCCAGTCAACTGGCACAGT...AGTCAACTGGCACAGTCCTTTGCATTCTACTGGTGTGGATGTAGATCTGCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR CCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGATGTGGGATCAGCATTaGCTCAAATTCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWMWDQH*LKFHSW
Trigger: CCAGGAGTGGAATTTGAGCCAATGCTGATCCCACAT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGCCAGTGGTGAGTAAGTaGCAGGCAACATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGPVVSK*QATCRK
Trigger: TTTCCTGCATGTTGCCTGCCACTTACTCACCACTGG...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR TCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGGTGAATCCTCAGAGTTaGAAGGAATCCATGTCTCCT +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWVNPQS*KESMSP
Trigger: AGGAGACATGGATTCCTTTCAACTCTGAGGATTCAC...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp ACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTACAAAAATCCTCTCCCCCAAATaGACATCATATCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TMLRKRRSQAGPIPWTTKILSPK*TSYLPP
Trigger: TGGGGGCAGATATGATGTTCATTTGGGGGAGAGGAT...TTTTGTAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR TCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGCCTCTAAAACTTGGCTaGAGCTCTCCGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLPLKLG*SSPSRE
Trigger: TTCCCTACTCGGAGAGCTTCAGCCAAGTTTTAGAGG...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATCTGCTCCGTGGGTGTTaGACCCCAATCATCAGACCC +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYLLRGC*TPIIRP
Trigger: GGGTCTGATGATTGGGGTTCAACACCCACGGAGCAG...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGAAGGACTGTGCCAGTTaGCTGGAAGAAATTCTACCC +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGKDCAS*LEEILP
Trigger: GGGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGAGCGAACCTAAACTATaGCCAGCAATGGATACACCC +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWSEPKL*PAMDTP
Trigger: GGGTGTATCCATTGCTGGTCATAGTTTAGGTTCGCT...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp GTGTCATTGGTGAAGTGCCTGAGGCGGTTAATGCTGGGCAGGGTTATTCGCTGCAAGAATTCAGAGAGCTaGAGTTTCTTCAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: VSLVKCLRRLMLGRVIRCKNSES*SFFKSS
Trigger: GGAAGATTTGAAGAAACTTCAGCTCTCTGAATTCTT...GCAGCGAATAACCCTGCCCAGCATTAACCGCCTCAGGCACTTCACCAATGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR TCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGTCTCTGGTTTATAGATaGGCCGGGGGTATTTCACAG +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWSLVYR*AGGISQ
Trigger: CTGTGAAATACCCCCGGCTCATCTATAAACCAGAGA...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ACTGTACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTATGCTCCTGTTGTGACTaGACTGATGACATTTCGCTC +
Preference number: 4 (lower is better)
Translates to: TVQCFESGDHKLVQSHGLCSCCD*TDDISL
Trigger: GAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCA...TAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR GCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGTCTGACTGGGACAACTaGTCCTGTTGTGACTGCACT +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWSDWDN*SCCDCT
Trigger: AGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGA...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGTCGTCTCACTTCCGATaGCAGTTCATCCCAGTATAC +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGSSHFR*QFIPVY
Trigger: GTATACTGGGATGAACTGGCATCGGAAGTGAGACGA...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGTCGTCTCACTTCCGATaGCAGTTCATCCCAGTATAC +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWSSHFR*QFIPVY
Trigger: GTATACTGGGATGAACTGGCATCGGAAGTGAGACGA...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp TTAATGCTGGGCAGGGTTATTCGCTGCAGATCTACATCCACACCAGTAGAATGCTCGTCTCACTTCCGATaGCAGTTCATCCCAGTATAC +
Preference number: 4 (lower is better)
Translates to: LMLGRVIRCRSTSTPVECSSHFR*QFIPVY
Trigger: GTATACTGGGATGAACTGGCATCGGAAGTGAGACGA...GCATTCTACTGGTGTGGATGTAGATCTGCAGCGAATAACCCTGCCCAGCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR GCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGCCAATCATCAGACCCTaGAACTGGCTGGTAATGCAC +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLPIIRP*NWLVMH
Trigger: GTGCATTACCAGCCAGTTGCAGGGTCTGATGATTGG...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGGTGTCATTGGTGAAGTaGCTGAGGCGGTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLVSLVK*LRRLML
Trigger: CAGCATTAACCGCCTCAGGCACTTCACCAATGACAC...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGAGTGCATCCGCTTCCTaGCTTTATGATGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWSASAS*LYDVGS
Trigger: TGATCCCACATCATAAAGGCAGGAAGCGGATGCACT...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGAGTGCATCCGCTTCCTaGCTTTATGATGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGSASAS*LYDVGS
Trigger: TGATCCCACATCATAAAGGCAGGAAGCGGATGCACT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR GCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGTCTCTCAGTTCTAAGTaGATCCGCTTCCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWSLSSK*IRFLPL
Trigger: TAAAGGCAGGAAGCGGATGCACTTAGAACTGAGAGA...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGGTAGCACATAGTCAATaGGTTGGCCTCCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGVAHSQ*VGLHSA
Trigger: TGCTGAATGGAGGCCAACGCATTGACTATGTGCTAC...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR GCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACATACCTGCTCAACCAATaGTGCCCGTGCCAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTYLLNQ*CPCQEP
Trigger: AGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCTACCTGCTCAACCAATaGTGCCCGTGCCAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTYLLNQ*CPCQEP
Trigger: AGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGAGGGATAAAGACCACTaGTGTCTAAGGAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWRDKDH*CLRNGF
Trigger: GAAGCCATTCCTTAGACAGCAGTGGTCTTTATCCCT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTACAGGGTTCACAGGGTaGCCAGGGTTCCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFTGFTG*PGFPQA
Trigger: AGCCTGGGGGAACCCTGGGCACCCTGTGAACCCTGT...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520272.6
CDS-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACATCTCTTCACAGTTCTTaGTCGACCCTGCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTSLHSS*STLLRG
Trigger: CCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGA...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCTCTCTTCACAGTTCTTaGTCGACCCTGCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTSLHSS*STLLRG
Trigger: CCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGA...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGTCCTGGGACCACCATTaGTTCAATCCTATAGGCCAC +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWSWDHH*FNPIGH
Trigger: GTGGCCTATAGGATTGAACCAATGGTGGTCCCAGGA...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTCCTGGGACCACCATTaGTTCAATCCTATAGGCCAC +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLSWDHH*FNPIGH
Trigger: GTGGCCTATAGGATTGAACCAATGGTGGTCCCAGGA...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGATGTGGGATCAGCATTaGCTCAAATTCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGMWDQH*LKFHSW
Trigger: CCAGGAGTGGAATTTGAGCCAATGCTGATCCCACAT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGGTCCATACTCATCCTaGTCAAGCCCTCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWGPYSS*SSPLSV
Trigger: AACTGAGAGAGGGCTTGACCAGGATGAGTATGGACC...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGCCAGTGGTGAGTAAGTaGCAGGCAACATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLPVVSK*QATCRK
Trigger: TTTCCTGCATGTTGCCTGCCACTTACTCACCACTGG...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp TGTACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTACAGTGAATCCTCAGAGTTaGAAGGAATCCATGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CTMLRKRRSQAGPIPWTTVNPQS*KESMSP
Trigger: AGGAGACATGGATTCCTTTCAACTCTGAGGATTCAC...TGTAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526237.5
ENST00000527415.5
CDS-3UTR TCA 90 bp TGTACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTACAACCCTCCCAATCTGCTaGTTTTCTTGGGCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: CTMLRKRRSQAGPIPWTTTLPIC*FSWAFL
Trigger: TAAGAAAGCCCAAGAAAATCAGCAGATTGGGAGGGT...TGTAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR TCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGATACACCCCCTTTaGAATCAGGGTTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLWIHPL*NQGSSV
Trigger: TACAGAGGAACCCTGATTTCAAAGGGGGTGTATCCA...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp CAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTACAAAAATGGATACACCCCCTTTaGAATCAGGGTTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: QCFESGDHKLVQSHGLQKWIHPL*NQGSSV
Trigger: TACAGAGGAACCCTGATTTCAAAGGGGGTGTATCCA...TTTTTGTAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR TCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGGGAATTCCTATTTCCTaGAGATCTCGGTCTGTACAT +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWGIPIS*RSRSVH
Trigger: ATGTACAGACCGAGATCTTCAGGAAATAGGAATTCC...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGTCTCTGGTTTATAGATaGGCCGGGGGTATTTCACAG +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWSLVYR*AGGISQ
Trigger: CTGTGAAATACCCCCGGCTCATCTATAAACCAGAGA...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR TCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACACGCTTCCTGCCTTTATaGTGTGGGATCAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTRFLPL*CGISIG
Trigger: GCCAATGCTGATCCCACATCATAAAGGCAGGAAGCG...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCAAGAAAGGCCAGGCCTaGCCTATACCCCAACCTTAC +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTKKGQA*PIPQPY
Trigger: GTAAGGTTGGGGTATAGGTCAGGCCTGGCCTTTCTT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGCTGGTTCATACAAGCTaGCAGCATCCATGTCTATTA +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWLVHTS*QHPCLL
Trigger: TAATAGACATGGATGCTGGCAGCTTGTATGAACCAG...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGTCCACACCAGTAGAATaGAAAGGACTGTGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWSTPVE*KGLCQL
Trigger: CAACTGGCACAGTCCTTTGCATTCTACTGGTGTGGA...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGTATTTCACAGACACCTaGCCAATGCCAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGYFTDT*PMPTSR
Trigger: TCTGGATGTTGGCATTGGGCAGGTGTCTGTGAAATA...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR GCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGAGTGCATCCGCTTCCTaGCTTTATGATGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLSASAS*LYDVGS
Trigger: TGATCCCACATCATAAAGGCAGGAAGCGGATGCACT...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGAGTGCATCCGCTTCCTaGCTTTATGATGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWSASAS*LYDVGS
Trigger: TGATCCCACATCATAAAGGCAGGAAGCGGATGCACT...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR GCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGTAGCACATAGTCAATaGGTTGGCCTCCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWVAHSQ*VGLHSA
Trigger: TGCTGAATGGAGGCCAACGCATTGACTATGTGCTAC...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR GCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGAACCAATGCTGCCCGTaGCAAGAGCCTTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWNQCCP*QEPFKY
Trigger: ATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCCAGCTCGCCTGCCTTTaGCACTCTATAAACAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTQLACL*HSINRG
Trigger: GCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTG...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACACAGCTCGCCTGCCTTTaGCACTCTATAAACAGAGGC +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTQLACL*HSINRG
Trigger: GCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTG...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGAAACCACAGCTCGCCTaGCTTTGCCACTCTATAAAC +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWKPQLA*LCHSIN
Trigger: GTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTT...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGAGGGATAAAGACCACTaGTGTCTAAGGAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGRDKDH*CLRNGF
Trigger: GAAGCCATTCCTTAGACAGCAGTGGTCTTTATCCCT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ACCCCAATCATCAGACCCTGCAACTGGCTGGTAATGCACCATAAGCTTTGGATTTACCACACTGTACAATaGTTCGAAAGCGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: TPIIRPCNWLVMHHKLWIYHTVQ*FESGDH
Trigger: GTGATCTCCGCTTTCGAAGCATTGTACAGTGTGGTA...AATCCAAAGCTTATGGTGCATTACCAGCCAGTTGCAGGGTCTGATGATTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR CCA 90 bp CAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTACAAAAAATCAGACCCTGCAACTaGCTGGTAATGCACCATAAG +
Preference number: 4 (lower is better)
Translates to: QCFESGDHKLVQSHGLQKIRPCN*LVMHHK
Trigger: CTTATGGTGCATTACCAGCCAGTTGCAGGGTCTGAT...TTTTTGTAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR CCA 90 bp TTCTCCACAATGAATGTCAACAGAGATGTTCTCAACTCCTCTCTTCACAGTTCTGTCGACCCTGCTCCGTaGGTGTTGAACCCCAATCAT +
Preference number: 4 (lower is better)
Translates to: FSTMNVNRDVLNSSLHSSVDPAP*VLNPNH
Trigger: ATGATTGGGGTTCAACACCCACGGAGCAGGGTCGAC...AGAACTGTGAAGAGAGGAGTTGAGAACATCTCTGTTGACATTCATTGTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR CCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGGGCAAAGAATATCTCTaGTTTATAGATGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGGKEYL*FIDEPG
Trigger: CCCCGGCTCATCTATAAACCAGAGATATTCTTTGCC...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGCTCAAATTCCACTCCTaGGACCACCATTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGLKFHS*DHHWFN
Trigger: ATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAG...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGCCTGCCTTTATGATGTaGGATCAGCATTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWPAFMM*DQHWLK
Trigger: TTTGAGCCAATGCTGATCCCACATCATAAAGGCAGG...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGAACAGGTGGATTTTCTaGGGAAGGATCCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWNRWIF*GRIPQC
Trigger: ACATTGAGGGATCCTTCCCCAGAAAATCCACCTGTT...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGAACAGGTGGATTTTCTaGGGAAGGATCCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGNRWIF*GRIPQC
Trigger: ACATTGAGGGATCCTTCCCCAGAAAATCCACCTGTT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR CCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGAAAGAGTGGTTTATCTaGCTATCCAGGGCTATGCTG +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGKEWFI*LSRAML
Trigger: CAGCATAGCCCTGGATAGCCAGATAAACCACTCTTT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGACAAAAGCTCTGCTCTaGAGGAACTCATGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLTKALL*RNSWSN
Trigger: GTTGGACCATGAGTTCCTCCAGAGCAGAGCTTTTGT...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517385.5
CDS-3UTR CCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGTCCTGGGACCACCATTaGTTCAATCAGGGTGATAAA +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGSWDHH*FNQGDK
Trigger: TTTATCACCCTGATTGAACCAATGGTGGTCCCAGGA...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529845.5
3UTR CAA 72 bp GGTTTATCTGGCTATCCAGGGCTATGCTGTCCATCTTaGGTTATAGGGACTCCCTCTGCTTATCCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: GLSGYPGLCCPS*VIGTPSAYPLV
Trigger: AACCAAAGGATAAGCAGAGGGAGTCCCTATAACCAAAGATGGACAGCATAGCCCTGGATAGCCAGATAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGAAAGGTTCTCCACAATaGATGTCAACAGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWKGSPQ*MSTEMF
Trigger: GAACATCTCTGTTGACATTCATTGTGGAGAACCTTT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGACCCTCCCAATCTGCTaGTTTTCTTGGGCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWTLPIC*FSWAFL
Trigger: TAAGAAAGCCCAAGAAAATCAGCAGATTGGGAGGGT...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp ACTGTGCCAGTTGACTGGAAGAAATTCTACCCTCCCAATCTGCTGATTTTCTTGAAGGACTGTGCCAGTTaGCTGGAAGAAATTCTACCC +
Preference number: 4 (lower is better)
Translates to: TVPVDWKKFYPPNLLIFLKDCAS*LEEILP
Trigger: GGGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTT...CAAGAAAATCAGCAGATTGGGAGGGTAGAATTTCTTCCAGTCAACTGGCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR TCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGGGAATTCCTATTTCCTaGAGATCTCGGTCTGTACAT +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGGIPIS*RSRSVH
Trigger: ATGTACAGACCGAGATCTTCAGGAAATAGGAATTCC...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGTTTTACTGTAAAGGCTaGTCAAGGAAGATACCCTGG +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGFYCKG*SRKIPW
Trigger: CCAGGGTATCTTCCTTGATCAGCCTTTACAGTAAAA...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR GCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACAGGCAGGGTTATTCGCTaGAGATCTACATCCACACCA +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTGRVIR*RSTSTP
Trigger: TGGTGTGGATGTAGATCTGCAGCGAATAACCCTGCC...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCGGCAGGGTTATTCGCTaGAGATCTACATCCACACCA +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTGRVIR*RSTSTP
Trigger: TGGTGTGGATGTAGATCTGCAGCGAATAACCCTGCC...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACAGTGTCATTGGTGAAGTaGCTGAGGCGGTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTVSLVK*LRRLML
Trigger: CAGCATTAACCGCCTCAGGCACTTCACCAATGACAC...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACACAGACACCTGCCCAATaGCAACATCCAGATAGTCAC +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTQTPAQ*QHPDSH
Trigger: GTGACTATCTGGATGTTGGCATTGGGCAGGTGTCTG...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGTCTCTCAGTTCTAAGTaGATCCGCTTCCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWSLSSK*IRFLPL
Trigger: TAAAGGCAGGAAGCGGATGCACTTAGAACTGAGAGA...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGGACTTCTTCTTTAACTaGCACAGAGGTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGDFFFN*HRGLFC
Trigger: ACAGAAGAGACCTCTGTGGCAGTTAAAGAAGAAGTC...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR GCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGAACCAATGCTGCCCGTaGCAAGAGCCTTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWNQCCP*QEPFKY
Trigger: ATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTT...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGGGCTATCCAGGGCTATaGTGTCCATCTTTGGTTATA +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLGYPGL*CPSLVI
Trigger: TATAACCAAAGATGGACAGCATAGCCCTGGATAGCC...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGAAGTGGGAGAAGAGCTaGAGTCACAAATTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWKWEKS*SHKLSS
Trigger: GCTGCTTAATTTGTGACTGCAGCTCTTCTCCCACTT...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528613.1
CDS-3UTR CCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCGGAGATGGATCTGACTaGGACAACTGCTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTGDGSD*DNCSCC
Trigger: ACAACAGGAGCAGTTGTCCCAGTCAGATCCATCTCC...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCCCAATGGGGAGAAACTaGTTCATACAAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTPMGRN*FIQAAS
Trigger: GCTGGCAGCTTGTATGAACCAGTTTCTCCCCATTGG...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACACCAATGGGGAGAAACTaGTTCATACAAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTPMGRN*FIQAAS
Trigger: GCTGGCAGCTTGTATGAACCAGTTTCTCCCCATTGG...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGGCAAAGAATATCTCTaGTTTATAGATGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWGKEYL*FIDEPG
Trigger: CCCCGGCTCATCTATAAACCAGAGATATTCTTTGCC...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGGAAACCTTTGCACGTTaGAAATCTGTAGTTGGGATC +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGETFAR*KSVVGI
Trigger: GATCCCAACTACAGATTTCCAACGTGCAAAGGTTTC...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACATCCTGGGACCACCATTaGTTCAATCCTATAGGCCAC +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTSWDHH*FNPIGH
Trigger: GTGGCCTATAGGATTGAACCAATGGTGGTCCCAGGA...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGCCTGCCTTTATGATGTaGGATCAGCATTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLPAFMM*DQHWLK
Trigger: TTTGAGCCAATGCTGATCCCACATCATAAAGGCAGG...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGCCTGCCTTTATGATGTaGGATCAGCATTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWPAFMM*DQHWLK
Trigger: TTTGAGCCAATGCTGATCCCACATCATAAAGGCAGG...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCGGTCCATACTCATCCTaGTCAAGCCCTCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTGPYSS*SSPLSV
Trigger: AACTGAGAGAGGGCTTGACCAGGATGAGTATGGACC...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGAACAGGTGGATTTTCTaGGGAAGGATCCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLNRWIF*GRIPQC
Trigger: ACATTGAGGGATCCTTCCCCAGAAAATCCACCTGTT...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCCCAGTGGTGAGTAAGTaGCAGGCAACATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTPVVSK*QATCRK
Trigger: TTTCCTGCATGTTGCCTGCCACTTACTCACCACTGG...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGATAAACAGAGGCCTGTaGAATCTGAGAGCAAGTATA +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWINRGL*NLRASI
Trigger: TATACTTGCTCTCAGATTCCACAGGCCTCTGTTTAT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp GAAACACTGCGAAAATCATTAACACACTGTACAATGCTTCGAAAGCGGAGATCACCTCTAAAACTTGGCTaGAGCTCTCCGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: ETLRKSLTHCTMLRKRRSPLKLG*SSPSRE
Trigger: TTCCCTACTCGGAGAGCTTCAGCCAAGTTTTAGAGG...TGATCTCCGCTTTCGAAGCATTGTACAGTGTGTTAATGATTTTCGCAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR TCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCAAGGACTGTGCCAGTTaGCTGGAAGAAATTCTACCC +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTKDCAS*LEEILP
Trigger: GGGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGAAGGGTGATAAATATTaGAGAAACCTTTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: NNKPQLACLCHSINRGLWKGDKY*RNLCTL
Trigger: CAACGTGCAAAGGTTTCTTCAATATTTATCACCCTT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGTTTGGTAGATCTCTTTaGGGACGAGCAATACTGTAT +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGFGRSL*GRAILY
Trigger: ATACAGTATTGCTCGTCCTCAAAGAGATCTACCAAA...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR TCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGTTTTACTGTAAAGGCTaGTCAAGGAAGATACCCTGG +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWFYCKG*SRKIPW
Trigger: CCAGGGTATCTTCCTTGATCAGCCTTTACAGTAAAA...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATTCTGACTGGGACAACTaGTCCTGTTGTGACTGCACT +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYSDWDN*SCCDCT
Trigger: AGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGA...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATCAGACACCTGCCCAATaGCAACATCCAGATAGTCAC +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYQTPAQ*QHPDSH
Trigger: GTGACTATCTGGATGTTGGCATTGGGCAGGTGTCTG...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGACTTCTTCTTTAACTaGCACAGAGGTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWDFFFN*HRGLFC
Trigger: ACAGAAGAGACCTCTGTGGCAGTTAAAGAAGAAGTC...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR GCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCGTAGCACATAGTCAATaGGTTGGCCTCCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTVAHSQ*VGLHSA
Trigger: TGCTGAATGGAGGCCAACGCATTGACTATGTGCTAC...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGAACCAATGCTGCCCGTaGCAAGAGCCTTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLNQCCP*QEPFKY
Trigger: ATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTT...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp GAAACACTGCGAAAATCATTAACACACTGTACAATGCTTCGAAAGCGGAGATCACCAATGGGGAGAAACTaGTTCATACAAGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ETLRKSLTHCTMLRKRRSPMGRN*FIQAAS
Trigger: GCTGGCAGCTTGTATGAACCAGTTTCTCCCCATTGG...TGATCTCCGCTTTCGAAGCATTGTACAGTGTGTTAATGATTTTCGCAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR CCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCATCAGACCCTGCAACTaGCTGGTAATGCACCATAAG +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTIRPCN*LVMHHK
Trigger: CTTATGGTGCATTACCAGCCAGTTGCAGGGTCTGAT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACAACTGTGCCAGTTGACTaGAAGAAATTCTACCCTCCC +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTTVPVD*KKFYPP
Trigger: GGGAGGGTAGAATTTCTTCCAGTCAACTGGCACAGT...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACAATGTGGGATCAGCATTaGCTCAAATTCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTMWDQH*LKFHSW
Trigger: CCAGGAGTGGAATTTGAGCCAATGCTGATCCCACAT...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCACCCTCCCAATCTGCTaGTTTTCTTGGGCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTTLPIC*FSWAFL
Trigger: TAAGAAAGCCCAAGAAAATCAGCAGATTGGGAGGGT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp GAAACACTGCGAAAATCATTAACACACTGTACAATGCTTCGAAAGCGGAGATCAAGCGAACCTAAACTATaGCCAGCAATGGATACACCC +
Preference number: 4 (lower is better)
Translates to: ETLRKSLTHCTMLRKRRSSEPKL*PAMDTP
Trigger: GGGTGTATCCATTGCTGGTCATAGTTTAGGTTCGCT...TGATCTCCGCTTTCGAAGCATTGTACAGTGTGTTAATGATTTTCGCAGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR TCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGGTAGGTGTATCTCCTTaGTCCATTACAATATTTAGC +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGVGVSP*SITIFS
Trigger: GCTAAATATTGTAATGGATCAAGGAGATACACCTAC...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGAAGGGTGATAAATATTaGAGAAACCTTTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGKGDKY*RNLCTL
Trigger: CAACGTGCAAAGGTTTCTTCAATATTTATCACCCTT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGAAGGGTGATAAATATTaGAGAAACCTTTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWKGDKY*RNLCTL
Trigger: CAACGTGCAAAGGTTTCTTCAATATTTATCACCCTT...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGTTTGGTAGATCTCTTTaGGGACGAGCAATACTGTAT +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWFGRSL*GRAILY
Trigger: ATACAGTATTGCTCGTCCTCAAAGAGATCTACCAAA...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR TCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCAAAGACCCCAGTGGTaGGTAAGTGGCAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFQRPQW*VSGRQH
Trigger: ATGTTGCCTGCCACTTACTCACCACTGGGGTCTTTG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
CDS-3UTR TCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGCAGGGTGATAAATATTaGAGAAACCTTTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWQGDKY*RNLCTL
Trigger: CAACGTGCAAAGGTTTCTTCAATATTTATCACCCTG...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529845.5
CDS-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATTCCACACCAGTAGAATaGAAAGGACTGTGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYSTPVE*KGLCQL
Trigger: CAACTGGCACAGTCCTTTGCATTCTACTGGTGTGGA...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp AGCAAGTTCAAGGAAACACTGCGAAAATCATTAACACACTGTACAATGCTTCGAGGCAGGGTTATTCGCTaGAGATCTACATCCACACCA +
Preference number: 4 (lower is better)
Translates to: SKFKETLRKSLTHCTMLRGRVIR*RSTSTP
Trigger: TGGTGTGGATGTAGATCTGCAGCGAATAACCCTGCC...TCGAAGCATTGTACAGTGTGTTAATGATTTTCGCAGTGTTTCCTTGAACTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR GCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACATATTTCACAGACACCTaGCCAATGCCAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTYFTDT*PMPTSR
Trigger: TCTGGATGTTGGCATTGGGCAGGTGTCTGTGAAATA...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATGTAGCACATAGTCAATaGGTTGGCCTCCATTCAGCA +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYVAHSQ*VGLHSA
Trigger: TGCTGAATGGAGGCCAACGCATTGACTATGTGCTAC...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCTAGCCAAACCTACCTaGTCAACCAATGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFLAKPT*STNAAR
Trigger: ACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATAAACCACAGCTCGCCTaGCTTTGCCACTCTATAAAC +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYKPQLA*LCHSIN
Trigger: GTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTT...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACACTAAGACAAAAGCTCTaGTCTGGAGGAACTCATGGT +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTLRQKL*SGGTHG
Trigger: ACCATGAGTTCCTCCAGAGCAGAGCTTTTGTCTTAG...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517385.5
CDS-3UTR CCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATATCAGACCCTGCAACTaGCTGGTAATGCACCATAAG +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYIRPCN*LVMHHK
Trigger: CTTATGGTGCATTACCAGCCAGTTGCAGGGTCTGAT...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACAGGCAAAGAATATCTCTaGTTTATAGATGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTGKEYL*FIDEPG
Trigger: CCCCGGCTCATCTATAAACCAGAGATATTCTTTGCC...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACACTCAAATTCCACTCCTaGGACCACCATTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTLKFHS*DHHWFN
Trigger: ATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAG...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCCTCAAATTCCACTCCTaGGACCACCATTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTLKFHS*DHHWFN
Trigger: ATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAG...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATATGTGGGATCAGCATTaGCTCAAATTCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYMWDQH*LKFHSW
Trigger: CCAGGAGTGGAATTTGAGCCAATGCTGATCCCACAT...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCAACAGGTGGATTTTCTaGGGAAGGATCCCTCAATGT +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTNRWIF*GRIPQC
Trigger: ACATTGAGGGATCCTTCCCCAGAAAATCCACCTGTT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTTGAAGACCACAACTTaGCAAAAGCTTCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLLKTTT*QKLPLN
Trigger: ATTAAGGGGAAGCTTTTGCCAAGTTGTGGTCTTCAA...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGTTGAAGACCACAACTTaGCAAAAGCTTCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: NDAAEERKIAATNRWIFWLKTTT*QKLPLN
Trigger: ATTAAGGGGAAGCTTTTGCCAAGTTGTGGTCTTCAA...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTATCCTCTCCCCCAAATaGACATCATATCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFILSPK*TSYLPP
Trigger: TGGGGGCAGATATGATGTTCATTTGGGGGAGAGGAT...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCCTCTAAAACTTGGCTaGAGCTCTCCGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFPLKLG*SSPSRE
Trigger: TTCCCTACTCGGAGAGCTTCAGCCAAGTTTTAGAGG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTAGCAGGAGAATCATTTaGACCCTGCAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFSRRII*TLQAEV
Trigger: AACCTCTGCCTGCAGGGTTCAAATGATTCTCCTGCT...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517385.5
CDS-3UTR GCA 90 bp CTGCGAAAATCATTAACACACTGTACAATGCTTCGAAAGCGGAGATCACAAGCTCTGGTTCATACAAGCTaGCAGCATCCATGTCTATTA +
Preference number: 4 (lower is better)
Translates to: LRKSLTHCTMLRKRRSQALVHTS*QHPCLL
Trigger: TAATAGACATGGATGCTGGCAGCTTGTATGAACCAG...AGCTTGTGATCTCCGCTTTCGAAGCATTGTACAGTGTGTTAATGATTTTCGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR GCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCGAATGCAAAGGACTGTaGCAGTTGACTGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTECKGL*QLTGRN
Trigger: ATTTCTTCCAGTCAACTGGCACAGTCCTTTGCATTC...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATTATTTCACAGACACCTaGCCAATGCCAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYYFTDT*PMPTSR
Trigger: TCTGGATGTTGGCATTGGGCAGGTGTCTGTGAAATA...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACAGACTTCTTCTTTAACTaGCACAGAGGTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTDFFFN*HRGLFC
Trigger: ACAGAAGAGACCTCTGTGGCAGTTAAAGAAGAAGTC...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGAAGTGTACTCCAAAATaGCTTCTGAATCTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGKCTPK*LLNLKN
Trigger: ATTCTTGAGATTCAGAAGGCATTTTGGAGTACACTT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTTAACAGATCAGCAGTaGATATTTTTGAGACGGAGT +
Preference number: 4 (lower is better)
Translates to: INNKPQLACLCHSINRGLLTDQQ*IFLRRS
Trigger: ACTCCGTCTCAAAAATATGCACTGCTGATCTGTTAA...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517385.5
CDS-3UTR CCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCCAGTGGTGAGTAAGTaGCAGGCAACATGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFPVVSK*QATCRK
Trigger: TTTCCTGCATGTTGCCTGCCACTTACTCACCACTGG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
CDS-3UTR CCA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGATGCTTTGTGGATTATaGATACCTAAGAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGMLCGL*IPKKER
Trigger: TCTTTCCTTCTTAGGTATCCATAATCCACAAAGCAT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATAAAGAGTGGTTTATCTaGCTATCCAGGGCTATGCTG +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYKEWFI*LSRAML
Trigger: CAGCATAGCCCTGGATAGCCAGATAAACCACTCTTT...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCAAAGGTTCTCCACAATaGATGTCAACAGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTKGSPQ*MSTEMF
Trigger: GAACATCTCTGTTGACATTCATTGTGGAGAACCTTT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR TCA 90 bp ACTGTGCCAGTTGACTGGAAGAAATTCTACCCTCCCAATCTGCTGATTTTCTTGGTAGGTGTATCTCCTTaGTCCATTACAATATTTAGC +
Preference number: 4 (lower is better)
Translates to: TVPVDWKKFYPPNLLIFLVGVSP*SITIFS
Trigger: GCTAAATATTGTAATGGATCAAGGAGATACACCTAC...CAAGAAAATCAGCAGATTGGGAGGGTAGAATTTCTTCCAGTCAACTGGCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR TCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATGGAATTCCTATTTCCTaGAGATCTCGGTCTGTACAT +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYGIPIS*RSRSVH
Trigger: ATGTACAGACCGAGATCTTCAGGAAATAGGAATTCC...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTTCTCTGGTTTATAGATaGGCCGGGGGTATTTCACAG +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFSLVYR*AGGISQ
Trigger: CTGTGAAATACCCCCGGCTCATCTATAAACCAGAGA...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACATTTGGTAGATCTCTTTaGGGACGAGCAATACTGTAT +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTFGRSL*GRAILY
Trigger: ATACAGTATTGCTCGTCCTCAAAGAGATCTACCAAA...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCTTTGGTAGATCTCTTTaGGGACGAGCAATACTGTAT +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTFGRSL*GRAILY
Trigger: ATACAGTATTGCTCGTCCTCAAAGAGATCTACCAAA...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACACAGTTGCAAAAACAATaGACATCAGTGATTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTQLQKQ*TSVISG
Trigger: GCCAGAAATCACTGATGTTCATTGTTTTTGCAACTG...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATGAATGCAAAGGACTGTaGCAGTTGACTGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYECKGL*QLTGRN
Trigger: ATTTCTTCCAGTCAACTGGCACAGTCCTTTGCATTC...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR GCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATTATAGGGACTCCCTCTaGTTATCCTTTGGTTTACTC +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYYRDSL*LSFGLL
Trigger: GAGTAAACCAAAGGATAAGCAGAGGGAGTCCCTATA...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTACTGTGCCAGTTGACTaGAAGAAATTCTACCCTCCC +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFTVPVD*KKFYPP
Trigger: GGGAGGGTAGAATTTCTTCCAGTCAACTGGCACAGT...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACAATAAACAGAGGCCTGTaGAATCTGAGAGCAAGTATA +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTINRGL*NLRASI
Trigger: TATACTTGCTCTCAGATTCCACAGGCCTCTGTTTAT...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACATTGAAGACCACAACTTaGCAAAAGCTTCCCCTTAAT +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTLKTTT*QKLPLN
Trigger: ATTAAGGGGAAGCTTTTGCCAAGTTGTGGTCTTCAA...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCGTAGGTGTATCTCCTTaGTCCATTACAATATTTAGC +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTVGVSP*SITIFS
Trigger: GCTAAATATTGTAATGGATCAAGGAGATACACCTAC...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR GCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTTATTTCACAGACACCTaGCCAATGCCAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFYFTDT*PMPTSR
Trigger: TCTGGATGTTGGCATTGGGCAGGTGTCTGTGAAATA...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTGGCAAAGAATATCTCTaGTTTATAGATGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFGKEYL*FIDEPG
Trigger: CCCCGGCTCATCTATAAACCAGAGATATTCTTTGCC...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCCTGCCTTTATGATGTaGGATCAGCATTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFPAFMM*DQHWLK
Trigger: TTTGAGCCAATGCTGATCCCACATCATAAAGGCAGG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATATAAACAGAGGCCTGTaGAATCTGAGAGCAAGTATA +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYINRGL*NLRASI
Trigger: TATACTTGCTCTCAGATTCCACAGGCCTCTGTTTAT...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATAAGAATTCAGAGAGCTaGAGTTTCTTCAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: CHSINRGLWNLRASIKDYKNSES*SFFKSS
Trigger: GGAAGATTTGAAGAAACTTCAGCTCTCTGAATTCTT...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTTTTTACTGTAAAGGCTaGTCAAGGAAGATACCCTGG +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFFYCKG*SRKIPW
Trigger: CCAGGGTATCTTCCTTGATCAGCCTTTACAGTAAAA...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
CDS-3UTR GCA 90 bp TCTGTAGAAAAAGTGTGTATATTCGGTTCATTTCAGAAGCAACTGTGTCCACAAGAATGCAAAGGACTGTaGCAGTTGACTGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: SVEKVCIFGSFQKQLCPQECKGL*QLTGRN
Trigger: ATTTCTTCCAGTCAACTGGCACAGTCCTTTGCATTC...TTGTGGACACAGTTGCTTCTGAAATGAACCGAATATACACACTTTTTCTACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR GCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTGACTTCTTCTTTAACTaGCACAGAGGTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFDFFFN*HRGLFC
Trigger: ACAGAAGAGACCTCTGTGGCAGTTAAAGAAGAAGTC...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
CDS-3UTR CCA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACAATGCTTTGTGGATTATaGATACCTAAGAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTMLCGL*IPKKER
Trigger: TCTTTCCTTCTTAGGTATCCATAATCCACAAAGCAT...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CCA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCATGCTTTGTGGATTATaGATACCTAAGAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTMLCGL*IPKKER
Trigger: TCTTTCCTTCTTAGGTATCCATAATCCACAAAGCAT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTGTAGGTGTATCTCCTTaGTCCATTACAATATTTAGC +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFVGVSP*SITIFS
Trigger: GCTAAATATTGTAATGGATCAAGGAGATACACCTAC...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR TCA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTAAGAATTCAGAGAGCTaGAGTTTCTTCAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFKNSES*SFFKSS
Trigger: GGAAGATTTGAAGAAACTTCAGCTCTCTGAATTCTT...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS GCA 90 bp AAGGTGAGGCGGCGGGGAGCGCGGCGCGCGACCGCGGGTGGGGCGTaGAGGGCCGCAGGGCACGGGCGGCAAGTGTCGCGAGAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: KVRRRGARRATAGGA*RAAGHGRQVSREVG
Trigger: CCCCACCTCTCGCGACACTTGCCGCCCGTGCCCTGCGGCCCTGCACGCCCCACCCGCGGTCGCGCGCCGCGCTCCCCGCCGCCTCACCTT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533100.5
CDS CCA 90 bp AGGCGAAAAGGTGAGGCGGCGGGGAGCGCGGCGCGCGACCGCGGGTaGGGCGTGCAGGGCCGCAGGGCACGGGCGGCAAGTGTCGCGAGA +
Preference number: 5 (lower is better)
Translates to: RRKGEAAGSAARDRG*GVQGRRARAASVAR
Trigger: TCTCGCGACACTTGCCGCCCGTGCCCTGCGGCCCTGCACGCCCCACCCGCGGTCGCGCGCCGCGCTCCCCGCCGCCTCACCTTTTCGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533100.5
CDS CCA 90 bp GGGCGTGCAGGGCCGCAGGGCACGGGCGGCAAGTGTCGCGAGAGGTaGGGGGAGTCGCGCGAGACGTGGCTCCTGCGGGCAGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GRAGPQGTGGKCRER*GESRETWLLRAGSC
Trigger: GCAGCTCCCTGCCCGCAGGAGCCACGTCTCGCGCGACTCCCCCCACCTCTCGCGACACTTGCCGCCCGTGCCCTGCGGCCCTGCACGCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533100.5
CDS GCA 90 bp TCAGGTCGTCCGCCCGCAGCCCCGCGACAGCAGCAGGGCAGCCAGTaGAGACCACAGGGTTCACAGGGTGCCCAGGGTTCCCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SGRPPAAPRQQQGSQ*RPQGSQGAQGSPRL
Trigger: GAGCCTGGGGGAACCCTGGGCACCCTGTGAACCCTGTGGTCTGCACTGGCTGCCCTGCTGCTGTCGCGGGGCTGCGGGCGGACGACCTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520272.6
CDS GCA 90 bp GGTGACGGAGATGGATCTGACTGGGACAACTGCTCCTGTTGTGACTaGACTGATGACATTTCGCTCTCTGCAGCCCCGCCGGGCTCGCGC +
Preference number: 5 (lower is better)
Translates to: GDGDGSDWDNCSCCD*TDDISLSAAPPGSR
Trigger: GCGCGAGCCCGGCGGGGCTGCAGAGAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGATCCATCTCCGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533100.5
CDS GCA 90 bp GGTGACGGAGATGGATCTGACTGGGACAACTGCTCCTGTTGTGACTaGACTGATGACATTTCGCTCTCTGGCGGCCCCGCCACTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GDGDGSDWDNCSCCD*TDDISLSGGPATPQ
Trigger: CTGAGGAGTGGCGGGGCCGCCAGAGAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGATCCATCTCCGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000526237.5
ENST00000526370.1
ENST00000528358.5
CDS GCA 90 bp GGTGACGGAGATGGATCTGACTGGGACAACTGCTCCTGTTGTGACTaGACTGATGACATTTCGCTCTCTCAGCCACCCTGGCGCGCCCCT +
Preference number: 5 (lower is better)
Translates to: GDGDGSDWDNCSCCD*TDDISLSQPPWRAP
Trigger: AGGGGCGCGCCAGGGTGGCTGAGAGAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGATCCATCTCCGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520272.6
CDS-3UTR CAA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCCTGCTCCGTGGGTGTaGAACCCCAATCATCAGACC +
Preference number: 5 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSPAPWV*NPNHQT
Trigger: GGTCTGATGATTGGGGTTCAACACCCACGGAGCAGG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp CAACTCCTCTCTTCACAGTTCTTGGTCGACCCTGCTCCGTGGGTGTTGAACCCCCCTGCTCCGTGGGTGTaGAACCCCAATCATCAGACC +
Preference number: 5 (lower is better)
Translates to: QLLSSQFLVDPAPWVLNPPAPWV*NPNHQT
Trigger: GGTCTGATGATTGGGGTTCAACACCCACGGAGCAGG...GGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR CAA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCATTCTTTGGGGATGTTaGCCCCTGAAGCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSILWGC*PLKQAA
Trigger: CGCAGCCTGCTTCAGGGGCAAACATCCCCAAAGAAT...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCACATAGTCAATGCGTaGGCCTCCATTCAGCATCCC +
Preference number: 5 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSHIVNA*ASIQHP
Trigger: GGGATGCTGAATGGAGGCCAACGCATTGACTATGTG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTGAGGAGAGGAAAATaGCAGCAACAAACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSLRRGK*QQQTGG
Trigger: TCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTATGCTGTCCATCTTaGGTTATAGGGACTCCCTCT +
Preference number: 5 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSLCCPS*VIGTPS
Trigger: AGAGGGAGTCCCTATAACCAAAGATGGACAGCATAG...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS TCA 90 bp GTCAAGCCCTCTCTCAGTTCTAAGTGCATCCGCTTCCTGCCTTTATaGTGTGGGATCAGCATTGGCTCAAATTCCACTCCTGGGACCACC +
Preference number: 5 (lower is better)
Translates to: VKPSLSSKCIRFLPL*CGISIGSNSTPGTT
Trigger: GGTGGTCCCAGGAGTGGAATTTGAGCCAATGCTGATCCCACATCATAAAGGCAGGAAGCGGATGCACTTAGAACTGAGAGAGGGCTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528504.5
ENST00000529845.5
CDS GCA 90 bp GAACTACATGAGTTTGGTGACGGAGATGGATCTGACTGGGACAACTaGTCCTGTTGTGACTGCACTGATGACATTTCGCTCTCTGGCGGC +
Preference number: 5 (lower is better)
Translates to: ELHEFGDGDGSDWDN*SCCDCTDDISLSGG
Trigger: GCCGCCAGAGAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGATCCATCTCCGTCACCAAACTCATGTAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000526237.5
ENST00000526370.1
ENST00000528358.5
ENST00000532222.5
CDS GCA 90 bp GAACTACATGAGTTTGGTGACGGAGATGGATCTGACTGGGACAACTaGTCCTGTTGTGACTGCACTGATGACATTTCGCTCTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: ELHEFGDGDGSDWDN*SCCDCTDDISLSAA
Trigger: GGCTGCAGAGAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGATCCATCTCCGTCACCAAACTCATGTAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533100.5
CDS-3UTR CAA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGCTCTCTTCACAGTTCTaGGTCGACCCTGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: NDAAEERKIAATNRWIFWLSSQF*VDPAPW
Trigger: CCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAG...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp ACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTACAAAACTCTCTTCACAGTTCTaGGTCGACCCTGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: TMLRKRRSQAGPIPWTTKLSSQF*VDPAPW
Trigger: CCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAG...TTTTGTAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS-3UTR CAA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGTCCAGAATTGTGTCATaGGTGAAGTGCCTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: NNKPQLACLCHSINRGLWSRIVS*VKCLRR
Trigger: CCGCCTCAGGCACTTCACCAATGACACAATTCTGGA...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGATTCTTTGGGGATGTTaGCCCCTGAAGCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGILWGC*PLKQAA
Trigger: CGCAGCCTGCTTCAGGGGCAAACATCCCCAAAGAAT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CAA 90 bp CATTTCCCCCTAGCCAAACCTACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCTGGAATAGCTGTTTCTaGGACCCTACAGACATAAGT +
Preference number: 5 (lower is better)
Translates to: HFPLAKPTCSTNAARAKSWNSCF*DPTDIS
Trigger: ACTTATGTCTGTAGGGTCCAAGAAACAGCTATTCCA...GCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS GCA 90 bp GAACTACATGAGTTTGGTGACGGAGATGGATCTGACTGGGACAACTaGTCCTGTTGTGACTGCACTGATGACATTTCGCTCTCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: ELHEFGDGDGSDWDN*SCCDCTDDISLSQP
Trigger: TGGCTGAGAGAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGATCCATCTCCGTCACCAAACTCATGTAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520272.6
CDS-3UTR CAA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGATTCTTTGGGGATGTTaGCCCCTGAAGCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: INNKPQLACLCHSINRGLILWGC*PLKQAA
Trigger: CGCAGCCTGCTTCAGGGGCAAACATCCCCAAAGAAT...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGCACATAGTCAATGCGTaGGCCTCCATTCAGCATCCC +
Preference number: 5 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGHIVNA*ASIQHP
Trigger: GGGATGCTGAATGGAGGCCAACGCATTGACTATGTG...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR CAA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGACAGCTCGCCTGCCTTaGCCACTCTATAAACAGAGG +
Preference number: 5 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWTARLP*PLYKQR
Trigger: CCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGT...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGACAGCTCGCCTGCCTTaGCCACTCTATAAACAGAGG +
Preference number: 5 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGTARLP*PLYKQR
Trigger: CCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS TCA 90 bp GCCAGTTCATCCCAGTATACAGCATACCGCATCCTCTCCCCCAAATaGACATCATATCTGCCCCCATCAGTAGGAACAACTCTCCCATTA +
Preference number: 5 (lower is better)
Translates to: ASSSQYTAYRILSPK*TSYLPPSVGTTLPL
Trigger: TAATGGGAGAGTTGTTCCTACTGATGGGGGCAGATATGATGTTCATTTGGGGGAGAGGATGCGGTATGCTGTATACTGGGATGAACTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000520272.6
ENST00000526370.1
ENST00000527415.5
ENST00000527834.5
ENST00000528358.5
ENST00000529642.1
ENST00000532222.5
ENST00000533100.5
CDS CCA 90 bp CCTGCCTTTATGATGTGGGATCAGCATTGGCTCAAATTCCACTCCTaGGACCACCATTGGTTCAATCCTATAGGCCACAGGATCAAAAGG +
Preference number: 5 (lower is better)
Translates to: PAFMMWDQHWLKFHS*DHHWFNPIGHRIKR
Trigger: CCTTTTGATCCTGTGGCCTATAGGATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAATGCTGATCCCACATCATAAAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528504.5
CDS-3UTR CAA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGAGGAACTACATGAGTTaGGTGACGGAGATGGATCTG +
Preference number: 5 (lower is better)
Translates to: NNKPQLACLCHSINRGLWRNYMS*VTEMDL
Trigger: CAGATCCATCTCCGTCACCAAACTCATGTAGTTCCT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGTCCAGAATTGTGTCATaGGTGAAGTGCCTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: NDAAEERKIAATNRWIFWSRIVS*VKCLRR
Trigger: CCGCCTCAGGCACTTCACCAATGACACAATTCTGGA...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp AATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTACAAAAACTCCAGAATTGTGTCATaGGTGAAGTGCCTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: NASKAEITSWSNPMDYKNSRIVS*VKCLRR
Trigger: CCGCCTCAGGCACTTCACCAATGACACAATTCTGGA...GTTTTTGTAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR CAA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGATGGATACACCCCCTTaGAAATCAGGGTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: NNKPQLACLCHSINRGLWMDTPP*KSGFLC
Trigger: ACAGAGGAACCCTGATTTCAAAGGGGGTGTATCCAT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGCTCCTGGGACCACCATaGGTTCAATCCTATAGGCCA +
Preference number: 5 (lower is better)
Translates to: NDAAEERKIAATNRWIFWLLGPP*VQSYRP
Trigger: TGGCCTATAGGATTGAACCAATGGTGGTCCCAGGAG...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGGATGTGGGATCAGCATaGGCTCAAATTCCACTCCTG +
Preference number: 5 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGDVGSA*AQIPLL
Trigger: CAGGAGTGGAATTTGAGCCAATGCTGATCCCACATC...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CAA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGCACATAGTCAATGCGTaGGCCTCCATTCAGCATCCC +
Preference number: 5 (lower is better)
Translates to: NDAAEERKIAATNRWIFWHIVNA*ASIQHP
Trigger: GGGATGCTGAATGGAGGCCAACGCATTGACTATGTG...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR CAA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGCTGAGGAGAGGAAAATaGCAGCAACAAACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: NNKPQLACLCHSINRGLWLRRGK*QQQTGG
Trigger: TCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAG...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGACAGCTCGCCTGCCTTaGCCACTCTATAAACAGAGG +
Preference number: 5 (lower is better)
Translates to: NDAAEERKIAATNRWIFWTARLP*PLYKQR
Trigger: CCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGT...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS TCA 90 bp TGGCATCCCTCTTATCTGGCAGCTGGTCAATGTGTACAGTGTCACTaGCCACTAGGCTTCTCTGAAGTTGATTCAGGTTCTGCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: WHPSYLAAGQCVQCH*PLGFSEVDSGSASV
Trigger: AACTGAAGCAGAACCTGAATCAACTTCAGAGAAGCCTAGTGGTCAGTGACACTGTACACATTGACCAGCTGCCAGATAAGAGGGATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524545.1
CDS-3UTR CAA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGAAAGGACTGTGCCAGTaGACTGGAAGAAATTCTACC +
Preference number: 5 (lower is better)
Translates to: NNKPQLACLCHSINRGLWKGLCQ*TGRNST
Trigger: GGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTTT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCATTCTTTGGGGATGTTaGCCCCTGAAGCAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTILWGC*PLKQAA
Trigger: CGCAGCCTGCTTCAGGGGCAAACATCCCCAAAGAAT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGCAGAACTCAGATTCTTaGGGGATGTTTGCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGQNSDS*GMFAPE
Trigger: TTCAGGGGCAAACATCCCCAAAGAATCTGAGTTCTG...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CAA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGATGTGGGATCAGCATaGGCTCAAATTCCACTCCTG +
Preference number: 5 (lower is better)
Translates to: NDAAEERKIAATNRWIFWDVGSA*AQIPLL
Trigger: CAGGAGTGGAATTTGAGCCAATGCTGATCCCACATC...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CAA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGTTCAGCATCCCCACATaGATAGGCAGGACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGFSIPT*IGRTSS
Trigger: AGAAGAAGTCCTGCCTATCAATGTGGGGATGCTGAA...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR CAA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGCTGAGGAGAGGAAAATaGCAGCAACAAACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGLRRGK*QQQTGG
Trigger: TCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAG...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR CAA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGCTGATTTTCTTGACTTaGAGACGGGTGAGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWLIFLT*RRVSPG
Trigger: ACCTGGACTCACCCGTCTCAAAGTCAAGAAAATCAG...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397166.7
CDS-3UTR CAA 90 bp ACAATGCTTCGAAAGCGGAGATCACAAGCTGGTCCAATCCCATGGACTACAAAAAGGAACTACATGAGTTaGGTGACGGAGATGGATCTG +
Preference number: 5 (lower is better)
Translates to: TMLRKRRSQAGPIPWTTKRNYMS*VTEMDL
Trigger: CAGATCCATCTCCGTCACCAAACTCATGTAGTTCCT...TTTTGTAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526237.5
ENST00000527415.5
CDS-3UTR CAA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGTGTGAATCCTCAGAGTaGAAAGGAATCCATGTCTCC +
Preference number: 5 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGCESSE*KGIHVS
Trigger: GGAGACATGGATTCCTTTCAACTCTGAGGATTCACA...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGGAAAGGACTGTGCCAGTaGACTGGAAGAAATTCTACC +
Preference number: 5 (lower is better)
Translates to: MTQLRRGKLQQQTGGFSGKGLCQ*TGRNST
Trigger: GGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTTT...CCCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGAGCGAACCTAGCAAGTaGTTCTTAAGGTCCATACTC +
Preference number: 5 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWSEPSK*FLRSIL
Trigger: GAGTATGGACCTTAAGAACAACTTGCTAGGTTCGCT...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGTTCAGCATCCCCACATaGATAGGCAGGACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: NDAAEERKIAATNRWIFWFSIPT*IGRTSS
Trigger: AGAAGAAGTCCTGCCTATCAATGTGGGGATGCTGAA...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR CAA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCCACATAGTCAATGCGTaGGCCTCCATTCAGCATCCC +
Preference number: 5 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTHIVNA*ASIQHP
Trigger: GGGATGCTGAATGGAGGCCAACGCATTGACTATGTG...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGCTGAGGAGAGGAAAATaGCAGCAACAAACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: NDAAEERKIAATNRWIFWLRRGK*QQQTGG
Trigger: TCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAG...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
ENST00000529845.5
CDS-3UTR CAA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGCTATGCTGTCCATCTTaGGTTATAGGGACTCCCTCT +
Preference number: 5 (lower is better)
Translates to: INNKPQLACLCHSINRGLLCCPS*VIGTPS
Trigger: AGAGGGAGTCCCTATAACCAAAGATGGACAGCATAG...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp AACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGACTGTACTGATTTTCTaGACTTTGAGACGGGTGAGT +
Preference number: 5 (lower is better)
Translates to: NNKPQLACLCHSINRGLWTVLIF*TLRRVS
Trigger: ACTCACCCGTCTCAAAGTCAAGAAAATCAGTACAGT...CCACAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397166.7
CDS GCA 90 bp GGAACAACTCTCCCATTACAACCAGAGCTATATGCCTCTTCCAGCTaGTGTGAATCCTCAGAGTTGAAAGGAATCCATGTCTCCTTAGAA +
Preference number: 5 (lower is better)
Translates to: GTTLPLQPELYASSS*CESSELKGIHVSLE
Trigger: TTCTAAGGAGACATGGATTCCTTTCAACTCTGAGGATTCACAGCAGCTGGAAGAGGCATATAGCTCTGGTTGTAATGGGAGAGTTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528358.5
CDS-3UTR CAA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCCTGCTCCGTGGGTGTaGAACCCCAATCATCAGACC +
Preference number: 5 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFPAPWV*NPNHQT
Trigger: GGTCTGATGATTGGGGTTCAACACCCACGGAGCAGG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCTCTCTTCACAGTTCTaGGTCGACCCTGCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFLSSQF*VDPAPW
Trigger: CCACGGAGCAGGGTCGACCAAGAACTGTGAAGAGAG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp TACCTGCTCAACCAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGGAGAAACCTTTGCACGTaGGAAATCTGTAGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: YLLNQCCPCQEPFKYALWRNLCT*EICSWD
Trigger: ATCCCAACTACAGATTTCCAACGTGCAAAGGTTTCT...CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATCTCCTGGGACCACCATaGGTTCAATCCTATAGGCCA +
Preference number: 5 (lower is better)
Translates to: CHSINRGLWNLRASIKDYLLGPP*VQSYRP
Trigger: TGGCCTATAGGATTGAACCAATGGTGGTCCCAGGAG...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCGATGTGGGATCAGCATaGGCTCAAATTCCACTCCTG +
Preference number: 5 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTDVGSA*AQIPLL
Trigger: CAGGAGTGGAATTTGAGCCAATGCTGATCCCACATC...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGAGCGAACCTAGCAAGTaGTTCTTAAGGTCCATACTC +
Preference number: 5 (lower is better)
Translates to: NDAAEERKIAATNRWIFWSEPSK*FLRSIL
Trigger: GAGTATGGACCTTAAGAACAACTTGCTAGGTTCGCT...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS TCA 90 bp GTAAAGGCTGATCAAGGAAGATACCCTGGGTTTGGTAGATCTCTTTaGGGACGAGCAATACTGTATCTTCAGACTCCCAGTAGCATAGAT +
Preference number: 5 (lower is better)
Translates to: VKADQGRYPGFGRSL*GRAILYLQTPSSID
Trigger: ATCTATGCTACTGGGAGTCTGAAGATACAGTATTGCTCGTCCTCAAAGAGATCTACCAAACCCAGGGTATCTTCCTTGATCAGCCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000526144.1
ENST00000528613.1
ENST00000529845.5
CDS GCA 90 bp ACTCTCCCATTACAACCTTTTCCAGAGCTATATGCCTCTTCCAGCTaGTGTGAATCCTCAGAGTTGAAAGGAATCCATGTCTCCTTAGAA +
Preference number: 5 (lower is better)
Translates to: TLPLQPFPELYASSS*CESSELKGIHVSLE
Trigger: TTCTAAGGAGACATGGATTCCTTTCAACTCTGAGGATTCACAGCAGCTGGAAGAGGCATATAGCTCTGGAAAAGGTTGTAATGGGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000520272.6
ENST00000526370.1
ENST00000527415.5
ENST00000527834.5
ENST00000529642.1
ENST00000532222.5
ENST00000533100.5
CDS CCA 90 bp ATGTGGGATCAGCATTGGCTCAAATTCCACTCCTGGGACCACCATTaGTTCAATCCTATAGGCCACAGGATCAAAAGGGTGATAAATATT +
Preference number: 5 (lower is better)
Translates to: MWDQHWLKFHSWDHH*FNPIGHRIKRVINI
Trigger: AATATTTATCACCCTTTTGATCCTGTGGCCTATAGGATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAATGCTGATCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528148.1
ENST00000528504.5
CDS-3UTR CAA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCATGGATACACCCCCTTaGAAATCAGGGTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTMDTPP*KSGFLC
Trigger: ACAGAGGAACCCTGATTTCAAAGGGGGTGTATCCAT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp AATGACGCAGCTGAGGAGAGGAAAATTGCAGCAACAAACAGGTGGATTTTCTGGAGAAACCTTTGCACGTaGGAAATCTGTAGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: NDAAEERKIAATNRWIFWRNLCT*EICSWD
Trigger: ATCCCAACTACAGATTTCCAACGTGCAAAGGTTTCT...CCAGAAAATCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAGCTGCGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000529845.5
CDS-3UTR CAA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACATTCAGCATCCCCACATaGATAGGCAGGACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTFSIPT*IGRTSS
Trigger: AGAAGAAGTCCTGCCTATCAATGTGGGGATGCTGAA...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp ATAAACAATAAACCACAGCTCGCCTGCCTTTGCCACTCTATAAACAGAGGCCTGTGGAATAGCTGTTTCTaGGACCCTACAGACATAAGT +
Preference number: 5 (lower is better)
Translates to: INNKPQLACLCHSINRGLWNSCF*DPTDIS
Trigger: ACTTATGTCTGTAGGGTCCAAGAAACAGCTATTCCA...CAGGCCTCTGTTTATAGAGTGGCAAAGGCAGGCGAGCTGTGGTTTATTGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACACTATGCTGTCCATCTTaGGTTATAGGGACTCCCTCT +
Preference number: 5 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTLCCPS*VIGTPS
Trigger: AGAGGGAGTCCCTATAACCAAAGATGGACAGCATAG...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS TCA 90 bp CCCATTACAACCTTTTCCAGAGCTATATGCCTCTTCCAGCTGCTGTaGATCCTCAGAGTTGAAAGGAATCCATGTCTCCTTAGAATCTAT +
Preference number: 5 (lower is better)
Translates to: PITTFSRAICLFQLL*ILRVERNPCLLRIY
Trigger: ATAGATTCTAAGGAGACATGGATTCCTTTCAACTCTGAGGATTCACAGCAGCTGGAAGAGGCATATAGCTCTGGAAAAGGTTGTAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000520272.6
ENST00000526370.1
ENST00000527415.5
ENST00000527834.5
ENST00000529642.1
ENST00000532222.5
ENST00000533100.5
CDS TCA 90 bp AACTCTCCCATTACAACCAGAGCTATATGCCTCTTCCAGCTGCTGTaGATCCTCAGAGTTGAAAGGAATCCATGTCTCCTTAGAATCTAT +
Preference number: 5 (lower is better)
Translates to: NSPITTRAICLFQLL*ILRVERNPCLLRIY
Trigger: ATAGATTCTAAGGAGACATGGATTCCTTTCAACTCTGAGGATTCACAGCAGCTGGAAGAGGCATATAGCTCTGGTTGTAATGGGAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528358.5
CDS GCA 90 bp TTACAGCAAGCATGTAAGTTTCCAGAGCTATATGCCTCTTCCAGCTaGTGTGAATCCTCAGAGTTGAAAGGAATCCATGTCTCCTTAGAA +
Preference number: 5 (lower is better)
Translates to: LQQACKFPELYASSS*CESSELKGIHVSLE
Trigger: TTCTAAGGAGACATGGATTCCTTTCAACTCTGAGGATTCACAGCAGCTGGAAGAGGCATATAGCTCTGGAAACTTACATGCTTGCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526237.5
CDS CCA 90 bp TTGGCTCCCCAGAGTAAACATCCCACAAAGCACAAGGACACACTATaGACATCAAAGAATTGTTTAGTCCAACAAGCTGTATTAGGCACA +
Preference number: 5 (lower is better)
Translates to: LAPQSKHPTKHKDTL*TSKNCLVQQAVLGT
Trigger: TGTGCCTAATACAGCTTGTTGGACTAAACAATTCTTTGATGTCCATAGTGTGTCCTTGTGCTTTGTGGGATGTTTACTCTGGGGAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520176.5
CDS-3UTR CAA 90 bp ATCACCCAAAAGTCTTTTCCATGTCCACTGAGACTTAGCCTTCAGTTCAACACATGTGAATCCTCAGAGTaGAAAGGAATCCATGTCTCC +
Preference number: 5 (lower is better)
Translates to: ITQKSFPCPLRLSLQFNTCESSE*KGIHVS
Trigger: GGAGACATGGATTCCTTTCAACTCTGAGGATTCACA...TGTGTTGAACTGAAGGCTAAGTCTCAGTGGACATGGAAAAGACTTTTGGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp GAAACACTGCGAAAATCATTAACACACTGTACAATGCTTCGAAAGCGGAGATCAATGGATACACCCCCTTaGAAATCAGGGTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: ETLRKSLTHCTMLRKRRSMDTPP*KSGFLC
Trigger: ACAGAGGAACCCTGATTTCAAAGGGGGTGTATCCAT...TGATCTCCGCTTTCGAAGCATTGTACAGTGTGTTAATGATTTTCGCAGTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR CAA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCTCCTGGGACCACCATaGGTTCAATCCTATAGGCCA +
Preference number: 5 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFLLGPP*VQSYRP
Trigger: TGGCCTATAGGATTGAACCAATGGTGGTCCCAGGAG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp TTTCTTTCAGAACAAGTTAAACATTTCCCCCTAGCCAAACCTACCTGCTCAACCAGCGAACCTAGCAAGTaGTTCTTAAGGTCCATACTC +
Preference number: 5 (lower is better)
Translates to: FLSEQVKHFPLAKPTCSTSEPSK*FLRSIL
Trigger: GAGTATGGACCTTAAGAACAACTTGCTAGGTTCGCT...GGTTGAGCAGGTAGGTTTGGCTAGGGGGAAATGTTTAACTTGTTCTGAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp TGCCACTCTATAAACAGAGGCCTGTGGAATCTGAGAGCAAGTATAAAGGATTATTTCAGCATCCCCACATaGATAGGCAGGACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: CHSINRGLWNLRASIKDYFSIPT*IGRTSS
Trigger: AGAAGAAGTCCTGCCTATCAATGTGGGGATGCTGAA...ATAATCCTTTATACTTGCTCTCAGATTCCACAGGCCTCTGTTTATAGAGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCACATAGTCAATGCGTaGGCCTCCATTCAGCATCCC +
Preference number: 5 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFHIVNA*ASIQHP
Trigger: GGGATGCTGAATGGAGGCCAACGCATTGACTATGTG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
CDS-3UTR CAA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTGATGTGGGATCAGCATaGGCTCAAATTCCACTCCTG +
Preference number: 5 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFDVGSA*AQIPLL
Trigger: CAGGAGTGGAATTTGAGCCAATGCTGATCCCACATC...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTAGGAACTACATGAGTTaGGTGACGGAGATGGATCTG +
Preference number: 5 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFRNYMS*VTEMDL
Trigger: CAGATCCATCTCCGTCACCAAACTCATGTAGTTCCT...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCAGAACTCAGATTCTTaGGGGATGTTTGCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFQNSDS*GMFAPE
Trigger: TTCAGGGGCAAACATCCCCAAAGAATCTGAGTTCTG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS-3UTR CAA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTTTCAGCATCCCCACATaGATAGGCAGGACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFFSIPT*IGRTSS
Trigger: AGAAGAAGTCCTGCCTATCAATGTGGGGATGCTGAA...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
CDS-3UTR CAA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTCTGAGGAGAGGAAAATaGCAGCAACAAACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFLRRGK*QQQTGG
Trigger: TCCACCTGTTTGTTGCTGCAATTTTCCTCTCCTCAG...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528613.1
CDS-3UTR CAA 90 bp TGTAGAAAAAGTGTGTATATTCGGTTCATTTCAGAAGCAACTGTGTCCACAATAAAAGGACTGTGCCAGTaGACTGGAAGAAATTCTACC +
Preference number: 5 (lower is better)
Translates to: CRKSVYIRFISEATVSTIKGLCQ*TGRNST
Trigger: GGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTTT...TATTGTGGACACAGTTGCTTCTGAAATGAACCGAATATACACACTTTTTCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527415.5
CDS-3UTR CAA 90 bp ATGGCAAGTGTTTATATGAAGCCAGTGGTTAAAAGTAATAGGGCCTTTTGCTTTAGAAACCTTTGCACGTaGGAAATCTGTAGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: MASVYMKPVVKSNRAFCFRNLCT*EICSWD
Trigger: ATCCCAACTACAGATTTCCAACGTGCAAAGGTTTCT...AAAGCAAAAGGCCCTATTACTTTTAACCACTGGCTTCATATAAACACTTGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
CDS CCA 72 bp GGGCCGCAGGGCACGGGCGGCAAGTGTCGCGAGAGGTaGGGGGAGTCGCGCGAGACGTGGCTCCTGCGGGCA +
Preference number: 6 (lower is better)
Translates to: GPQGTGGKCRER*GESRETWLLRA
Trigger: TGCCCGCAGGAGCCACGTCTCGCGCGACTCCCCCCACCTCTCGCGACACTTGCCGCCCGTGCCCTGCGGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533100.5
CDS CCA 72 bp GCTCGCGCCGAACACCAGGCGCCACGGCGCTCCCAGTaGGCGAGTAGCGGGCCCGGATGCCAGGCGAAAAGG +
Preference number: 6 (lower is better)
Translates to: ARAEHQAPRRSQ*ASSGPGCQAKR
Trigger: CCTTTTCGCCTGGCATCCGGGCCCGCTACTCGCCCACTGGGAGCGCCGTGGCGCCTGGTGTTCGGCGCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397166.7
ENST00000533100.5
CDS CCA 72 bp GACTGCACTGATGACATTTCGCTCTCTCAGCCACCCTaGCGCGCCCCTGGCCCCCGCGACCCTAGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: DCTDDISLSQPP*RAPGPRDPRPW
Trigger: CCAGGGCCTAGGGTCGCGGGGGCCAGGGGCGCGCCAGGGTGGCTGAGAGAGCGAAATGTCATCAGTGCAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520272.6
CDS GCA 72 bp GATGGATCTGACTGGGACAACTGCTCCTGTTGTGACTaGACTGATGACATTTCGCTCTCTGGCGGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: DGSDWDNCSCCD*TDDISLSGGPA
Trigger: GGCGGGGCCGCCAGAGAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGATCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000526237.5
ENST00000526370.1
ENST00000528358.5
ENST00000532222.5
CDS GCA 72 bp GATGGATCTGACTGGGACAACTGCTCCTGTTGTGACTaGACTGATGACATTTCGCTCTCTGCAGCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: DGSDWDNCSCCD*TDDISLSAAPP
Trigger: CGGCGGGGCTGCAGAGAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGATCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533100.5
CDS GCA 72 bp GATGGATCTGACTGGGACAACTGCTCCTGTTGTGACTaGACTGATGACATTTCGCTCTCTCAGCCACCCTGG +
Preference number: 6 (lower is better)
Translates to: DGSDWDNCSCCD*TDDISLSQPPW
Trigger: CCAGGGTGGCTGAGAGAGCGAAATGTCATCAGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGATCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520272.6
CDS CCA 72 bp CATCCGCTTCCTGCCTTTATGATGTGGGATCAGCATTaGCTCAAATTCCACTCCTGGGACCACCATTGGTTC +
Preference number: 6 (lower is better)
Translates to: HPLPAFMMWDQH*LKFHSWDHHWF
Trigger: GAACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAATGCTGATCCCACATCATAAAGGCAGGAAGCGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528504.5
ENST00000529845.5
CDS CCA 72 bp AAACGCCACACCATGGCATCCCTCTTATCTGGCAGCTaGTCAATGTGTACAGTGTCACTGACCACTAGGCTT +
Preference number: 6 (lower is better)
Translates to: KRHTMASLLSGS*SMCTVSLTTRL
Trigger: AAGCCTAGTGGTCAGTGACACTGTACACATTGACCAGCTGCCAGATAAGAGGGATGCCATGGTGTGGCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524545.1
CDS CAA 72 bp GCATCCGCTTCCTGCCTTTATGATGTGGGATCAGCATaGGCTCAAATTCCACTCCTGGGACCACCATTGGTT +
Preference number: 6 (lower is better)
Translates to: ASASCLYDVGSA*AQIPLLGPPLV
Trigger: AACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAATGCTGATCCCACATCATAAAGGCAGGAAGCGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528504.5
ENST00000529845.5
CDS CAA 72 bp AAAGACTTCCAGGCCATCCGCAGCGAACCTAGCAAGTaGTTCTTAAGGTCCATACTCATCCTGGTCAAGCCC +
Preference number: 6 (lower is better)
Translates to: KDFQAIRSEPSK*FLRSILILVKP
Trigger: GGGCTTGACCAGGATGAGTATGGACCTTAAGAACAACTTGCTAGGTTCGCTGCGGATGGCCTGGAAGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528504.5
ENST00000529845.5
CDS CCA 72 bp CAGCATTGGCTCAAATTCCACTCCTGGGACCACCATTaGTTCAATCCTATAGGCCACAGGATCAAAAGGGTG +
Preference number: 6 (lower is better)
Translates to: QHWLKFHSWDHH*FNPIGHRIKRV
Trigger: CACCCTTTTGATCCTGTGGCCTATAGGATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528148.1
ENST00000528504.5
CDS CCA 72 bp ATGATGTGGGATCAGCATTGGCTCAAATTCCACTCCTaGGACCACCATTGGTTCAATCCTATAGGCCACAGG +
Preference number: 6 (lower is better)
Translates to: MMWDQHWLKFHS*DHHWFNPIGHR
Trigger: CCTGTGGCCTATAGGATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAATGCTGATCCCACATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528504.5
CDS CAA 90 bp AGCTGCCAGCATCCATGTCTATTAGCTCAAAGGAACTACATGAGTTaGGTGACGGAGATGGATCTGACTGGGACAACTGCTCCTGTTGTG +
Preference number: 6 (lower is better)
Translates to: SCQHPCLLAQRNYMS*VTEMDLTGTTAPVV
Trigger: CACAACAGGAGCAGTTGTCCCAGTCAGATCCATCTCCGTCACCAAACTCATGTAGTTCCTTTGAGCTAATAGACATGGATGCTGGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000520272.6
ENST00000526237.5
ENST00000526370.1
ENST00000527415.5
ENST00000527834.5
ENST00000528358.5
ENST00000532222.5
ENST00000533100.5
CDS TCA 72 bp TCCCAGTATACAGCATACCGCATCCTCTCCCCCAAATaGACATCATATCTGCCCCCATCAGTAGGAACAACT +
Preference number: 6 (lower is better)
Translates to: SQYTAYRILSPK*TSYLPPSVGTT
Trigger: AGTTGTTCCTACTGATGGGGGCAGATATGATGTTCATTTGGGGGAGAGGATGCGGTATGCTGTATACTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000520272.6
ENST00000526370.1
ENST00000527415.5
ENST00000527834.5
ENST00000528358.5
ENST00000529642.1
ENST00000532222.5
ENST00000533100.5
CDS CAA 72 bp TCAGCATTGGCTCAAATTCCACTCCTGGGACCACCATaGGTTCAATCCTATAGGCCACAGGATCAAAAGGGT +
Preference number: 6 (lower is better)
Translates to: SALAQIPLLGPP*VQSYRPQDQKG
Trigger: ACCCTTTTGATCCTGTGGCCTATAGGATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528148.1
ENST00000528504.5
CDS CAA 90 bp TTTCCAGAGCTATATGCCTCTTCCAGCTGCTGTGAATCCTCAGAGTaGAAAGGAATCCATGTCTCCTTAGAATCTATTATCTGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: FPELYASSSCCESSE*KGIHVSLESIIWRP
Trigger: GGGCCGCCAGATAATAGATTCTAAGGAGACATGGATTCCTTTCAACTCTGAGGATTCACAGCAGCTGGAAGAGGCATATAGCTCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529642.1
CDS TCA 72 bp TCTCTCAGTTCTAAGTGCATCCGCTTCCTGCCTTTATaGTGTGGGATCAGCATTGGCTCAAATTCCACTCCT +
Preference number: 6 (lower is better)
Translates to: SLSSKCIRFLPL*CGISIGSNSTP
Trigger: AGGAGTGGAATTTGAGCCAATGCTGATCCCACATCATAAAGGCAGGAAGCGGATGCACTTAGAACTGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528504.5
ENST00000529845.5
CDS GCA 72 bp TCAAGCCCTCTCTCAGTTCTAAGTGCATCCGCTTCCTaGCTTTATGATGTGGGATCAGCATTGGCTCAAATT +
Preference number: 6 (lower is better)
Translates to: SSPLSVLSASAS*LYDVGSALAQI
Trigger: AATTTGAGCCAATGCTGATCCCACATCATAAAGGCAGGAAGCGGATGCACTTAGAACTGAGAGAGGGCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528504.5
ENST00000529845.5
CDS GCA 72 bp CATATCTGTAACAGAGCTCTGCTGCTCAACCAATGCTaGCCGTGCCAAGAGCCTTTTAAATATGCTTTGTGG +
Preference number: 6 (lower is better)
Translates to: HICNRALLLNQC*PCQEPFKYALW
Trigger: CCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTGGTTGAGCAGCAGAGCTCTGTTACAGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529872.1
CDS GCA 72 bp CTCCCATTACAACCAGAGCTATATGCCTCTTCCAGCTaGTGTGAATCCTCAGAGTTGAAAGGAATCCATGTC +
Preference number: 6 (lower is better)
Translates to: LPLQPELYASSS*CESSELKGIHV
Trigger: GACATGGATTCCTTTCAACTCTGAGGATTCACAGCAGCTGGAAGAGGCATATAGCTCTGGTTGTAATGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528358.5
CDS CAA 90 bp GATGTGGGATCAGCATTGGCTCAAATTCCACTCCTGGGACCACCATaGGTTCAATCCTATAGGCCACAGGATCAAAAGGGTGATAAATAT +
Preference number: 6 (lower is better)
Translates to: DVGSALAQIPLLGPP*VQSYRPQDQKGDKY
Trigger: ATATTTATCACCCTTTTGATCCTGTGGCCTATAGGATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAATGCTGATCCCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000524545.1
ENST00000526144.1
ENST00000528148.1
ENST00000528504.5
CDS TCA 72 bp GATCAAGGAAGATACCCTGGGTTTGGTAGATCTCTTTaGGGACGAGCAATACTGTATCTTCAGACTCCCAGT +
Preference number: 6 (lower is better)
Translates to: DQGRYPGFGRSL*GRAILYLQTPS
Trigger: ACTGGGAGTCTGAAGATACAGTATTGCTCGTCCTCAAAGAGATCTACCAAACCCAGGGTATCTTCCTTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520176.5
ENST00000520272.6
ENST00000526144.1
ENST00000528613.1
ENST00000529845.5
CDS GCA 72 bp TTACAACCTTTTCCAGAGCTATATGCCTCTTCCAGCTaGTGTGAATCCTCAGAGTTGAAAGGAATCCATGTC +
Preference number: 6 (lower is better)
Translates to: LQPFPELYASSS*CESSELKGIHV
Trigger: GACATGGATTCCTTTCAACTCTGAGGATTCACAGCAGCTGGAAGAGGCATATAGCTCTGGAAAAGGTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000520272.6
ENST00000526370.1
ENST00000527415.5
ENST00000527834.5
ENST00000529642.1
ENST00000532222.5
ENST00000533100.5
CDS CCA 72 bp ATGATGTGGGATCAGCATTGGCTCAAATTCCACTCCTaGGACCACCATTGGTTCAATCAGGGTGATAAATAT +
Preference number: 6 (lower is better)
Translates to: MMWDQHWLKFHS*DHHWFNQGDKY
Trigger: ATATTTATCACCCTGATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAATGCTGATCCCACATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529845.5
CDS CAA 72 bp CAATGCTGCCCGTGCCAAGAGCCTTTTAAATATGCTTaGTGGATTATGGATACATTAAGCAGCCATAGATGG +
Preference number: 6 (lower is better)
Translates to: QCCPCQEPFKYA*WIMDTLSSHRW
Trigger: CCATCTATGGCTGCTTAATGTATCCATAATCCACAAAGCATATTTAAAAGGCTCTTGGCACGGGCAGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529872.1
CDS TCA 72 bp ATCTTCTTTCTTGGTCCTAAAGGAATTCCTATTTCCTaGAGATCTCGGTCTGTACATAAAGCCAGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: IFFLGPKGIPIS*RSRSVHKARAS
Trigger: GGAAGCTCTGGCTTTATGTACAGACCGAGATCTTCAGGAAATAGGAATTCCTTTAGGACCAAGAAAGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397166.7
ENST00000517385.5
ENST00000520272.6
ENST00000528504.5
CDS GCA 72 bp AATAAAACCAATGGGGAGAAACTGGTTCATACAAGCTaGCAGCATCCATGTCTATTAGCTCAAAGGAACTAC +
Preference number: 6 (lower is better)
Translates to: NKTNGEKLVHTS*QHPCLLAQRNY
Trigger: GTAGTTCCTTTGAGCTAATAGACATGGATGCTGGCAGCTTGTATGAACCAGTTTCTCCCCATTGGTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000520272.6
ENST00000526237.5
ENST00000526370.1
ENST00000527415.5
ENST00000527834.5
ENST00000528358.5
ENST00000532222.5
ENST00000533100.5
CDS CAA 72 bp CTATATGCCTCTTCCAGCTGCTGTGAATCCTCAGAGTaGAAAGGAATCCATGTCTCCTTAGAATCTATTATC +
Preference number: 6 (lower is better)
Translates to: LYASSSCCESSE*KGIHVSLESII
Trigger: GATAATAGATTCTAAGGAGACATGGATTCCTTTCAACTCTGAGGATTCACAGCAGCTGGAAGAGGCATATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000397166.7
ENST00000519857.5
ENST00000520272.6
ENST00000526237.5
ENST00000526370.1
ENST00000527415.5
ENST00000527834.5
ENST00000528358.5
ENST00000529642.1
ENST00000532222.5
ENST00000533100.5
CDS TCA 72 bp AGTATAGCCAAAGGATTATATAGTTTTCTACTGGTTTaGAAGGACCCTTGGGAAAGTTCTGAAATGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SIAKGLYSFLLV*KDPWESSEMAA
Trigger: GGCTGCCATTTCAGAACTTTCCCAAGGGTCCTTTCAAACCAGTAGAAAACTATATAATCCTTTGGCTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520176.5
CDS TCA 72 bp TACCTAAACTATGACCAGCAATGGATACACCCCCTTTaGAATCAGGGTTCCTCTGTAGAAAAAGTGTGTATA +
Preference number: 6 (lower is better)
Translates to: YLNYDQQWIHPL*NQGSSVEKVCI
Trigger: TATACACACTTTTTCTACAGAGGAACCCTGATTTCAAAGGGGGTGTATCCATTGCTGGTCATAGTTTAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531344.1
CDS CAA 72 bp CACAAAGCACAAGGACACACTATGGACATCAAAGAATaGTTTAGTCCAACAAGCTGTATTAGGCACATACCA +
Preference number: 6 (lower is better)
Translates to: HKAQGHTMDIKE*FSPTSCIRHIP
Trigger: TGGTATGTGCCTAATACAGCTTGTTGGACTAAACAATTCTTTGATGTCCATAGTGTGTCCTTGTGCTTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520176.5
CDS CCA 72 bp AGGACTAAATCAGTTCATCTGTACTTAGTGACTTCCTaGATAGTATTGCCAAATTTTACCCATCCTACCATA +
Preference number: 6 (lower is better)
Translates to: RTKSVHLYLVTS*IVLPNFTHPTI
Trigger: TATGGTAGGATGGGTAAAATTTGGCAATACTATCCAGGAAGTCACTAAGTACAGATGAACTGATTTAGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519857.5