RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DDHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100523

Ensembl transcript IDs: ENST00000323669.10, ENST00000357758.3, ENST00000395606.5, ENST00000553406.1, ENST00000555400.1, ENST00000555621.1, ENST00000556027.5, ENST00000556910.1, ENST00000557445.1, ENST00000612692.4, ENST00000673822.2, ENST00000673827.1, ENST00000673930.1, ENST00000674014.1, ENST00000674152.1

Found 1292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTAGGCAGTGGAGAAGCAGGCAGGAGAGTCAGGTTGGGCAGGCTGTaGGGAGCCTTGAGTGACAGATGGCATCATCAAAGGGCTTTGGTT +
Preference number: 1 (lower is better)
Translates to: VGSGEAGRRVRLGRL*GALSDRWHHQRALV
Trigger: AACCAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGCTCCCCACAGCCTGCCCAACCTGACTCTCCTGCCTGCTTCTCCACTGCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 90 bp AGGAGAGTCAGGTTGGGCAGGCTGTGGGGAGCCTTGAGTGACAGATaGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCC +
Preference number: 1 (lower is better)
Translates to: RRVRLGRLWGALSDR*HHQRALVVIRPMCP
Trigger: GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGCTCCCCACAGCCTGCCCAACCTGACTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 90 bp TCAAGCAGGGACCGCAGTGGGTGTGGGTACAGTCAAGGGAAGGTATaGGTGACGCTCCTAGATATTCAATGTCTTCCAGGAGAAAGCAGT +
Preference number: 1 (lower is better)
Translates to: SSRDRSGCGYSQGKV*VTLLDIQCLPGESS
Trigger: ACTGCTTTCTCCTGGAAGACATTGAATATCTAGGAGCGTCACTCATACCTTCCCTTGACTGTACCCACACCCACTGCGGTCCCTGCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 90 bp GTTTTGCCATGGATGGCTCCATCCTCATATCACCCCATGTGCCACTaGATTGTGTTTAACAGCCATAGAAGGCTACCTGCATTTCAGGGC +
Preference number: 1 (lower is better)
Translates to: VLPWMAPSSYHPMCH*IVFNSHRRLPAFQG
Trigger: GCCCTGAAATGCAGGTAGCCTTCTATGGCTGTTAAACACAATCCAGTGGCACATGGGGTGATATGAGGATGGAGCCATCCATGGCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 90 bp CAGATGCACATAATCCATGTCACAGGAAAGGGTGGAGTTTTGCCATaGATGGCTCCATCCTCATATCACCCCATGTGCCACTGGATTGTG +
Preference number: 1 (lower is better)
Translates to: QMHIIHVTGKGGVLP*MAPSSYHPMCHWIV
Trigger: CACAATCCAGTGGCACATGGGGTGATATGAGGATGGAGCCATCCATGGCAAAACTCCACCCTTTCCTGTGACATGGATTATGTGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR GCA 90 bp GGTGGAGTTTTGCCATGGATGGCTCCATCCTCATATCACCCCATGTaGCACTGGATTGTGTTTAACAGCCATAGAAGGCTACCTGCATTT +
Preference number: 1 (lower is better)
Translates to: GGVLPWMAPSSYHPM*HWIVFNSHRRLPAF
Trigger: AAATGCAGGTAGCCTTCTATGGCTGTTAAACACAATCCAGTGGCACATGGGGTGATATGAGGATGGAGCCATCCATGGCAAAACTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR GCA 90 bp TTTTCAACCTATCCTTCTGCCCTCCTCACCCACAGTGTTCCAGTCTaGAGTGTCTGTTGTTCCCACCTTTGCATCCTGAGGTACTCAATA +
Preference number: 1 (lower is better)
Translates to: FSTYPSALLTHSVPV*SVCCSHLCILRYSI
Trigger: TATTGAGTACCTCAGGATGCAAAGGTGGGAACAACAGACACTGCAGACTGGAACACTGTGGGTGAGGAGGGCAGAAGGATAGGTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 90 bp TACGTACACTGTCCCATCTCAATTCTACATGTAGTCCTTATAGCCTaGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATT +
Preference number: 1 (lower is better)
Translates to: YVHCPISILHVVLIA*PRISHLRSAPPHGI
Trigger: AATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCAGGCTATAAGGACTACATGTAGAATTGAGATGGGACAGTGTACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 90 bp GTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTaGTGCATAGGGAGATCTTTCAATTTTCATAAACTTTTTGGAAGA +
Preference number: 1 (lower is better)
Translates to: VATSLPSRTECGSHS*CIGRSFNFHKLFGR
Trigger: TCTTCCAAAAAGTTTATGAAAATTGAAAGATCTCCCTATGCATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 90 bp TCTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATaGCAGATGCACATAATCCATGTCACAGGAAAGGGTGGAGTTTTG +
Preference number: 1 (lower is better)
Translates to: SPGTLGSFLVYASFS*QMHIIHVTGKGGVL
Trigger: CAAAACTCCACCCTTTCCTGTGACATGGATTATGTGCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 90 bp TACCACATTTTCTTTATCCAGTCCACTGTTGATGGGCAGCCACGTTaGTCTGTCTTTGCTACTGTGAATAGCACTGTGATGACCATATGT +
Preference number: 1 (lower is better)
Translates to: YHIFFIQSTVDGQPR*SVFATVNSTVMTIC
Trigger: ACATATGGTCATCACAGTGCTATTCACAGTAGCAAAGACAGATCAACGTGGCTGCCCATCAACAGTGGACTGGATAAAGAAAATGTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 90 bp ATATTTAGTAACCGGTTACAAATCTCTCTAGGCAAAATATGGTCTTaGCTTCCAGTATTTCCTGGGCGGATGCCACGCAACGCCAAGAAA +
Preference number: 1 (lower is better)
Translates to: IFSNRLQISLGKIWS*LPVFPGRMPRNAKK
Trigger: TTTCTTGGCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGTCAAGACCATATTTTGCCTAGAGAGATTTGTAACCGGTTACTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR CCA 90 bp GGAGTAGTTTCCTATCGATTAGGGGAAACAGTCTGGTATAAGACATaGTTGGGAATCAGGGGACTAGGTTCTAATTCTGACTGTCATTCA +
Preference number: 1 (lower is better)
Translates to: GVVSYRLGETVWYKT*LGIRGLGSNSDCHS
Trigger: TGAATGACAGTCAGAATTAGAACCTAGTCCCCTGATTCCCAACCATGTCTTATACCAGACTGTTTCCCCTAATCGATAGGAAACTACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 90 bp TTCTGCCCTTTAGGAGTAGTTTCCTATCGATTAGGGGAAACAGTCTaGTATAAGACATGGTTGGGAATCAGGGGACTAGGTTCTAATTCT +
Preference number: 1 (lower is better)
Translates to: FCPLGVVSYRLGETV*YKTWLGIRGLGSNS
Trigger: AGAATTAGAACCTAGTCCCCTGATTCCCAACCATGTCTTATACCAGACTGTTTCCCCTAATCGATAGGAAACTACTCCTAAAGGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR GCA 90 bp TACTTGCTTCAGTTCTCCAGGAACTCTTGGCTCATTTCTTGTGTATaGTTCCTTTTCATGGCAGATGCACATAATCCATGTCACAGGAAA +
Preference number: 1 (lower is better)
Translates to: YLLQFSRNSWLISCV*FLFMADAHNPCHRK
Trigger: TTTCCTGTGACATGGATTATGTGCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAGAACTGAAGCAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 90 bp ACAAGTAAGCCACAGATTCTACTATCTTATGAAGAAAGGAGGAGGTaGGAGATACAGCTGACCAACTTTGCTCCCAGTTTGACAATGATT +
Preference number: 1 (lower is better)
Translates to: TSKPQILLSYEERRR*EIQLTNFAPSLTMI
Trigger: AATCATTGTCAAACTGGGAGCAAAGTTGGTCAGCTGTATCTCTCACCTCCTCCTTTCTTCATAAGATAGTAGAATCTGTGGCTTACTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 90 bp ATCAGGGGACTAGGTTCTAATTCTGACTGTCATTCATTGGCCATGTaGTTGTATAGGGTGGAATCGGTCACTTACAAAATGAAGGAATCA +
Preference number: 1 (lower is better)
Translates to: IRGLGSNSDCHSLAM*LYRVESVTYKMKES
Trigger: TGATTCCTTCATTTTGTAAGTGACCGATTCCACCCTATACAATCACATGGCCAATGAATGACAGTCAGAATTAGAACCTAGTCCCCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 90 bp GATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGACATaGTTTTGTTCTTTTTATGGCTGCCTAATACTCCATGATTTATAT +
Preference number: 1 (lower is better)
Translates to: DYGFQLYPCGWLQRT*FCSFYGCLILHDLY
Trigger: ATATAAATCATGGAGTATTAGGCAGCCATAAAAAGAACAAAATCATGTCCTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 90 bp TTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTaGTTCTCTGGAGAAGGTTTTGTCAGACTCATAATTAAAATGATG +
Preference number: 1 (lower is better)
Translates to: FTCSLPKPSSHPGLA*FSGEGFVRLIIKMM
Trigger: CATCATTTTAATTATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR GCA 90 bp AAGGATTTGAAGTATTGTACCAGTGGATCTGGACAGGTGAAATGTTaGTGTAGTGTTTCAGTATTAATGGTTCTAATCTATAAGCCACTG +
Preference number: 1 (lower is better)
Translates to: KDLKYCTSGSGQVKC*CSVSVLMVLIYKPL
Trigger: CAGTGGCTTATAGATTAGAACCATTAATACTGAAACACTACAGCAACATTTCACCTGTCCAGATCCACTGGTACAATACTTCAAATCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR TCA 90 bp AGGAAAAGAAAAAGCCTGCCTTCAAAGAGTTGTGATTGCAGTCATTaGCAACATTTAGTAGTGTTAGAGAGAGTGAACATAAGAAGTCAT +
Preference number: 1 (lower is better)
Translates to: RKRKSLPSKSCDCSH*QHLVVLERVNIRSH
Trigger: ATGACTTCTTATGTTCACTCTCTCTAACACTACTAAATGTTGTCAATGACTGCAATCACAACTCTTTGAAGGCAGGCTTTTTCTTTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 90 bp TACATTATGTTCCATATGCCTTTATATTTGGGAGGAATCAGATTGTaGTTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACAT +
Preference number: 1 (lower is better)
Translates to: YIMFHMPLYLGGIRL*FVAFTCSLPKPSSH
Trigger: ATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAATATAAAGGCATATGGAACATAATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR TCA 90 bp AATCAAGCAGGGAAACACCGGCTTCATGGTCATTTCTCTGAATTATaGATTGCAACTTCTGTTATTATTGTTTGCAAACTACTAAAAGGT +
Preference number: 1 (lower is better)
Translates to: NQAGKHRLHGHFSEL*IATSVIIVCKLLKG
Trigger: ACCTTTTAGTAGTTTGCAAACAATAATAACAGAAGTTGCAATTCATAATTCAGAGAAATGACCATGAAGCCGGTGTTTCCCTGCTTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 90 bp GGAGAAGCAGGCAGGAGAGTCAGGTTGGGCAGGCTGTGGGGAGCCTaGAGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGA +
Preference number: 2 (lower is better)
Translates to: GEAGRRVRLGRLWGA*SDRWHHQRALVVIR
Trigger: TCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGCTCCCCACAGCCTGCCCAACCTGACTCTCCTGCCTGCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAGGACCGCAGTGGGTGTaGGTACAGTCAAGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEGPQWV*VQSREG
Trigger: ACCTTCCCTTGACTGTACCCACACCCACTGCGGTCC...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 90 bp TGCCATGGATGGCTCCATCCTCATATCACCCCATGTGCCACTGGATaGTGTTTAACAGCCATAGAAGGCTACCTGCATTTCAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: CHGWLHPHITPCATG*CLTAIEGYLHFRAS
Trigger: GCTGGCCCTGAAATGCAGGTAGCCTTCTATGGCTGTTAAACACAATCCAGTGGCACATGGGGTGATATGAGGATGGAGCCATCCATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 90 bp TCATGGCAGATGCACATAATCCATGTCACAGGAAAGGGTGGAGTTTaGCCATGGATGGCTCCATCCTCATATCACCCCATGTGCCACTGG +
Preference number: 2 (lower is better)
Translates to: SWQMHIIHVTGKGGV*PWMAPSSYHPMCHW
Trigger: CCAGTGGCACATGGGGTGATATGAGGATGGAGCCATCCATGGCAAAACTCCACCCTTTCCTGTGACATGGATTATGTGCATCTGCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGACTTCTGGGCTCGGGTaGTCCTCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTTSGLG*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACCCGAGCCCAGAAGT...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATCTTGAGGCACAGGAATaGCAGCGGAATACAGATAAG +
Preference number: 2 (lower is better)
Translates to: ELWPLAFLVERNVAATADLEAQE*QRNTDK
Trigger: CTTATCTGTATTCCGCTGTCATTCCTGTGCCTCAAG...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAGGACCGCAGTGGGTGTaGGTACAGTCAAGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKGPQWV*VQSREG
Trigger: ACCTTCCCTTGACTGTACCCACACCCACTGCGGTCC...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAACTTCTGGGCTCGGGTaGTCCTCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: FYSKGFLVSHILGHGALETSGLG*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACCCGAGCCCAGAAGT...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCAACAGGGATGGCTACTaGTCCCCTCTAGGTAACTCC +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPNRDGY*SPLGNS
Trigger: GGAGTTACCTAGAGGGGATCAGTAGCCATCCCTGTT...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATCGTGAGTATTCAGCATaGAGCATGTTCAGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: ELWPLAFLVERNVAATADREYSA*SMFSVS
Trigger: ACTCACACTGAACATGCTTCATGCTGAATACTCACG...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTTCCTGGCAGAGGCTTaGGGCACAGGAATGACAGCG +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYFLAEA*GTGMTA
Trigger: CGCTGTCATTCCTGTGCCTCAAGCCTCTGCCAGGAA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGTTCCTGGCAGAGGCTTaGGGCACAGGAATGACAGCG +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKFLAEA*GTGMTA
Trigger: CGCTGTCATTCCTGTGCCTCAAGCCTCTGCCAGGAA...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGGGACCACAGGCGTCTaGCAACACACCCAGCTAATC +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKGTTGV*QHTQLI
Trigger: GATTAGCTGGGTGTGTTGGCAGACGCCTGTGGTCCC...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGGACCGCAGTGGGTGTaGGTACAGTCAAGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTGPQWV*VQSREG
Trigger: ACCTTCCCTTGACTGTACCCACACCCACTGCGGTCC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATAAGCAGGGACCGCAGTaGGTGTGGGTACAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYKQGPQ*VWVQSR
Trigger: CCTTGACTGTACCCACACCCACTGCGGTCCCTGCTT...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp ATCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCTCACAGGGCTTGGTATaGTTGAAATGCCTTCATTCT +
Preference number: 2 (lower is better)
Translates to: IEEARTAMWKGLCPYGGSSQGLV*LKCLHS
Trigger: AGAATGAAGGCATTTCAACCATACCAAGCCCTGTGA...GCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR CAA 90 bp AGGCTGTGGGGAGCCTTGAGTGACAGATGGCATCATCAAAGGGCTTaGGTTGTCATCAGACCTATGTGTCCCTATCCCCTTTCTCATAAA +
Preference number: 2 (lower is better)
Translates to: RLWGALSDRWHHQRA*VVIRPMCPYPLSHK
Trigger: TTTATGAGAAAGGGGATAGGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGCTCCCCACAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCTTGGGATTACAGGCGTaGACCACGGTGACTAGCTCA +
Preference number: 2 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCLGLQA*TTVTSS
Trigger: TGAGCTAGTCACCGTGGTTCACGCCTGTAATCCCAA...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGGTGAGAGATACAGCTaGCCAACTTTGCTCCCAGTT +
Preference number: 2 (lower is better)
Translates to: WPRISHLRSAPPHGIALKGERYS*PTLLPV
Trigger: AACTGGGAGCAAAGTTGGTCAGCTGTATCTCTCACC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCTGTGGCAGCCACAGCTaGTGCATAGGGAGATCTTTC +
Preference number: 2 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCCGSHS*CIGRSF
Trigger: GAAAGATCTCCCTATGCATCAGCTGTGGCTGCCACA...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCAGCCTCTTGAGTAGCTaGGACTACAGGTGTACACCA +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPSLLSS*DYRCTP
Trigger: TGGTGTACACCTGTAGTCCCAGCTACTCAAGAGGCT...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGGTACCATCAGATTCCTaGCAGAGGCTTGAGGCACAG +
Preference number: 2 (lower is better)
Translates to: IAKATQSRKNKASSITQMVPSDS*QRLEAQ
Trigger: CTGTGCCTCAAGCCTCTGCCAGGAATCTGATGGTAC...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAACAGAGGTGTATGTGTaGAGGGGAGGTTGGGGGACA +
Preference number: 2 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTTEVYV*RGGWGT
Trigger: TGTCCCCCAACCTCCCCTCCACACATACACCTCTGT...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGTCTCAGGAGAGTTATaGTGCCAGCTGCTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPVSGEL*CQLLLR
Trigger: TCTCAGAAGCAGCTGGCACCATAACTCTCCTGAGAC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGCACTCTTAAACTTTaGGCCCCTCAGATGAAAAGC +
Preference number: 2 (lower is better)
Translates to: SSDVLEGVVATSLPSRTECTLKL*APQMKS
Trigger: GCTTTTCATCTGAGGGGCTCAAAGTTTAAGAGTGCA...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGTGCCCAAGCTGGTCTTaGAATCCTGGGCTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKCPSWS*NPGLKR
Trigger: TCTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCA...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACATGCCCAAGCTGGTCTTaGAATCCTGGGCTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTCPSWS*NPGLKR
Trigger: TCTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCA...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATAACAGGGATGGCTACTaGTCCCCTCTAGGTAACTCC +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYNRDGY*SPLGNS
Trigger: GGAGTTACCTAGAGGGGATCAGTAGCCATCCCTGTT...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGGGTGAGAGATACAGCTaGCCAACTTTGCTCCCAGTT +
Preference number: 2 (lower is better)
Translates to: IAKATQSRKNKASSITQMGERYS*PTLLPV
Trigger: AACTGGGAGCAAAGTTGGTCAGCTGTATCTCTCACC...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAACTGAGGCCTTTAGCGTaGGTATTCAGCATGAAGCAT +
Preference number: 2 (lower is better)
Translates to: WPRISHLRSAPPHGIALKLRPLA*VFSMKH
Trigger: ATGCTTCATGCTGAATACTCACGCTAAAGGCCTCAG...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTCTACTGTCTAGGTaGTGCAAAGCTGGAATATGG +
Preference number: 2 (lower is better)
Translates to: SSDVLEGVVATSLPSRTECLLSR*CKAGIW
Trigger: CCATATTCCAGCTTTGCATCACCTAGACAGTAGACA...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTCTTTTGGCTTGATCTaGCTCCACTGGAAGGGGCTC +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYSFGLI*LHWKGL
Trigger: GAGCCCCTTCCAGTGGAGTCAGATCAAGCCAAAAGA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACATCTTTTGGCTTGATCTaGCTCCACTGGAAGGGGCTC +
Preference number: 2 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTSFGLI*LHWKGL
Trigger: GAGCCCCTTCCAGTGGAGTCAGATCAAGCCAAAAGA...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTGCACCAGTTCCAGCTaGGAAAATCAGAACTGGACA +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPCTSSS*ENQNWT
Trigger: TGTCCAGTTCTGATTTTCTCAGCTGGAACTGGTGCA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GGTCTTGACTTCCAGTATTTCCTGGGCGGATGCCACGCAACGCCAAGAAAACTGTCTTGCTTGATTCTCTaGAGAAGGTTTTGTCAGACT +
Preference number: 2 (lower is better)
Translates to: GLDFQYFLGGCHATPRKLSCLIL*RRFCQT
Trigger: AGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGA...CAGTTTTCTTGGCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGTCAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR-3UTR CCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGTGTCACAGGAAAGGGTaGAGTTTTGCCATGGATGGC +
Preference number: 2 (lower is better)
Translates to: IAKATQSRKNKASSITQMCHRKG*SFAMDG
Trigger: GCCATCCATGGCAAAACTCCACCCTTTCCTGTGACA...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAGTCTCAATGGCACATTaGGAAACAATGTGCACTAGT +
Preference number: 2 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEVSMAH*ETMCTS
Trigger: ACTAGTGCACATTGTTTCTCAATGTGCCATTGAGAC...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGAATGCCTCAGAATCCTaGCTTACTGTGCCTTGTGTC +
Preference number: 2 (lower is better)
Translates to: IAKATQSRKNKASSITQMNASES*LTVPCV
Trigger: GACACAAGGCACAGTAAGTCAGGATTCTGAGGCATT...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGTTGGGATTACAGGCGTaGACCACGGTGACTAGCTCA +
Preference number: 2 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWLGLQA*TTVTSS
Trigger: TGAGCTAGTCACCGTGGTTCACGCCTGTAATCCCAA...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTACTTCTGGGCTCGGGTaGTCCTCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSTSGLG*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACCCGAGCCCAGAAGT...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAATGTCTACTGTCTAGGTaGTGCAAAGCTGGAATATGG +
Preference number: 2 (lower is better)
Translates to: WPRISHLRSAPPHGIALKCLLSR*CKAGIW
Trigger: CCATATTCCAGCTTTGCATCACCTAGACAGTAGACA...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTCACCCAGGCTGGAGTaGATTGGTGTGATCAGAGCT +
Preference number: 2 (lower is better)
Translates to: KAFYSKGFLVSHILGHGASPRLE*IGVIRA
Trigger: AGCTCTGATCACACCAATGCACTCCAGCCTGGGTGA...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTCAGGAGAGTTATGGTaGCAGCTGCTTCTGAGAAAT +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPSGELW*QLLLRN
Trigger: ATTTCTCAGAAGCAGCTGGCACCATAACTCTCCTGA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTGTGTGCAACAGGGATaGCTACTGATCCCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: KAFYSKGFLVSHILGHGACVQQG*LLIPSR
Trigger: CCTAGAGGGGATCAGTAGCCATCCCTGTTGCACACA...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGAATGGGAAGGTGAGTaGAAAGGTAGTAGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCEWEGE*KGSRSR
Trigger: CCTACTCCTACTACCTTTCCACTCACCTTCCCATTC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 90 bp TTAGAACAGCCTAGTCTGAGGTTGCTCACTGTAGGGCACAACTACTaGTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAG +
Preference number: 2 (lower is better)
Translates to: LEQPSLRLLTVGHNY*FRVSKITNGSIQLE
Trigger: CTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTCAGACTAGGCTGTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 90 bp TTCTTCATAGCTCATCCATCGTTCATCAGGCAACTCTTCTTCCTTTaGCAGCAACTGTTCATACAGCCGAACTGGATTCCAGCCAGTCAT +
Preference number: 2 (lower is better)
Translates to: FFIAHPSFIRQLFFL*QQLFIQPNWIPASH
Trigger: ATGACTGGCTGGAATCCAGTTCGGCTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTTGCCTGATGAACGATGGATGAGCTATGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCTGCACTCTTAAACTTTaGGCCCCTCAGATGAAAAGC +
Preference number: 2 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCCTLKL*APQMKS
Trigger: GCTTTTCATCTGAGGGGCTCAAAGTTTAAGAGTGCA...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCAGTCAAGGGAAGGTATaGGTGACGCTCCTAGATATT +
Preference number: 2 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCSQGKV*VTLLDI
Trigger: AATATCTAGGAGCGTCACTCATACCTTCCCTTGACT...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGCCTTCAAAGAGTTGTaGTTGCAGTCATTGACAACA +
Preference number: 2 (lower is better)
Translates to: WPRISHLRSAPPHGIALKAFKEL*LQSLTT
Trigger: TGTTGTCAATGACTGCAATCACAACTCTTTGAAGGC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGTGTACTTTATCCTCTaGTGTTCTAGAGGGAGTTGT +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPVYFIL*CSRGSC
Trigger: ACAACTCCCTCTAGAACATCAGAGGATAAAGTACAC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGTCTGGAGGTGATACTTaGTTCAGTTCTCCAGGAACT +
Preference number: 2 (lower is better)
Translates to: IAKATQSRKNKASSITQMSGGDT*FSSPGT
Trigger: AGTTCCTGGAGAACTGAAGCAAGTATCACCTCCAGA...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGCCTTGTGTCTCAATaGCACATTGAGAAACAATGT +
Preference number: 2 (lower is better)
Translates to: SSDVLEGVVATSLPSRTECLVSQ*HIEKQC
Trigger: ACATTGTTTCTCAATGTGCCATTGAGACACAAGGCA...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATTGTGTGCAACAGGGATaGCTACTGATCCCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: VSGEQDNKRINSARETQYCVQQG*LLIPSR
Trigger: CCTAGAGGGGATCAGTAGCCATCCCTGTTGCACACA...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTTAGGGGAAACAGTCTaGTATAAGACATGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPLGETV*YKTWLG
Trigger: TCCCAACCATGTCTTATACCAGACTGTTTCCCCTAA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTCTTACTGGCAAAGTTaGGATTATGGCAGCCTTAGA +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPSYWQS*DYGSLR
Trigger: TCTAAGGCTGCCATAATCCCAACTTTGCCAGTAAGA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATGAATGGGAAGGTGAGTaGAAAGGTAGTAGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYEWEGE*KGSRSR
Trigger: CCTACTCCTACTACCTTTCCACTCACCTTCCCATTC...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGCCTTGAGTGACAGATaGCATCATCAAAGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKALSDR*HHQRAL
Trigger: CAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGC...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGAAATCTCCGTATCTTaGCACACACATTTTAACGGA +
Preference number: 2 (lower is better)
Translates to: WPRISHLRSAPPHGIALKEISVS*HTHFNG
Trigger: TCCGTTAAAATGTGTGTGTCAAGATACGGAGATTTC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGAATGCCTCAGAATCCTaGCTTACTGTGCCTTGTGTC +
Preference number: 2 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWNASES*LTVPCV
Trigger: GACACAAGGCACAGTAAGTCAGGATTCTGAGGCATT...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTGCCCAAGCTGGTCTTaGAATCCTGGGCTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYCPSWS*NPGLKR
Trigger: TCTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACAACAGGGATGGCTACTaGTCCCCTCTAGGTAACTCC +
Preference number: 2 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYNRDGY*SPLGNS
Trigger: GGAGTTACCTAGAGGGGATCAGTAGCCATCCCTGTT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGGTGAGAGATACAGCTaGCCAACTTTGCTCCCAGTT +
Preference number: 2 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSGERYS*PTLLPV
Trigger: AACTGGGAGCAAAGTTGGTCAGCTGTATCTCTCACC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGATTCTACTATCTTATaGAGAAAGGAGGAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPDSTIL*RKEEVR
Trigger: TCTCACCTCCTCCTTTCTTCATAAGATAGTAGAATC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAAAGTTCTTATGCATTTaGGTGTCATACCACCTACAG +
Preference number: 2 (lower is better)
Translates to: WPRISHLRSAPPHGIALKKFLCI*VSYHLQ
Trigger: CTGTAGGTGGTATGACACTCAAATGCATAAGAACTT...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAAATGAAGGAATCACATaGGGAGGTGAAACTGTAAAA +
Preference number: 2 (lower is better)
Translates to: SSDVLEGVVATSLPSRTENEGIT*GGETVK
Trigger: TTTTACAGTTTCACCTCCTCATGTGATTCCTTCATT...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGAACAGTTTTGGAGGTaGCCTATTTGTCATGAATTG +
Preference number: 2 (lower is better)
Translates to: WPRISHLRSAPPHGIALKEQFWR*PICHEL
Trigger: CAATTCATGACAAATAGGTCACCTCCAAAACTGTTC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTCTGGAGGTGATACTTaGTTCAGTTCTCCAGGAACT +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYSGGDT*FSSPGT
Trigger: AGTTCCTGGAGAACTGAAGCAAGTATCACCTCCAGA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTCTTGCTTGATTCTCTaGAGAAGGTTTTGTCAGACT +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPSCLIL*RRFCQT
Trigger: AGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTGTGTGCAACAGGGATaGCTACTGATCCCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYCVQQG*LLIPSR
Trigger: CCTAGAGGGGATCAGTAGCCATCCCTGTTGCACACA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAATGAGCTGCCACACCTaGCCAAAATCCAGTATATTT +
Preference number: 2 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKMSCHT*PKSSIF
Trigger: AAATATACTGGATTTTGGCCAGGTGTGGCAGCTCAT...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGCCACAGACATCATACTaGATGAGCAAAAGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKPQTSY*MSKSWN
Trigger: GTTCCAGCTTTTGCTCATCCAGTATGATGTCTGTGG...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGCTAAAAGGTCACATGTaGATCAAGTCATTGAACAGC +
Preference number: 2 (lower is better)
Translates to: IAKATQSRKNKASSITQMLKGHM*IKSLNS
Trigger: GCTGTTCAATGACTTGATTCACATGTGACCTTTTAG...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAACTAACTAAAGTTCAGTaGTCTAATCAGTACTTGGGA +
Preference number: 2 (lower is better)
Translates to: WPRISHLRSAPPHGIALKLTKVQ*SNQYLG
Trigger: TCCCAAGTACTGATTAGATCACTGAACTTTAGTTAG...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGCGTGAGTATTCAGCATaGAGCATGTTCAGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWREYSA*SMFSVS
Trigger: ACTCACACTGAACATGCTTCATGCTGAATACTCACG...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGCGGTCACTTACAAAATaGAGGAATCACATGAGGAGG +
Preference number: 2 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWRSLTK*RNHMRR
Trigger: CCTCCTCATGTGATTCCTTCATTTTGTAAGTGACCG...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCCAGATTAAAGCTTGCTaGTGCTTTAATCTGAGCTTA +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPQIKAC*CFNLSL
Trigger: TAAGCTCAGATTAAAGCATCAGCAAGCTTTAATCTG...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATGATAGGGTACTCTTATaGGAGTCTGGAAGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYDRVLL*ESGRKK
Trigger: CTTCTTTCTTCCAGACTCTCATAAGAGTACCCTATC...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGTGTACTTTATCCTCTaGTGTTCTAGAGGGAGTTGT +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKVYFIL*CSRGSC
Trigger: ACAACTCCCTCTAGAACATCAGAGGATAAAGTACAC...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACAGAGCTATGGTCACTaGCTGAACCCTGGACTGAGA +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPQSYGH*LNPGLR
Trigger: TCTCAGTCCAGGGTTCAGTCAGTGACCATAGCTCTG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGCTTTCCACAGTGACTaGACTAATTTACATTCCCAC +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKAFHSD*TNLHSH
Trigger: GTGGGAATGTAAATTAGTTCAGTCACTGTGGAAAGC...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTaGTTGATTCTCTGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFFTSRS*LILWRR
Trigger: CCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAA...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGAATCCTGACTTACTGTaGCTTGTGTCTCAATGGCAC +
Preference number: 2 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTNPDLL*LVSQWH
Trigger: GTGCCATTGAGACACAAGGCACAGTAAGTCAGGATT...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGAATCCTGACTTACTGTaGCTTGTGTCTCAATGGCAC +
Preference number: 2 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWNPDLL*LVSQWH
Trigger: GTGCCATTGAGACACAAGGCACAGTAAGTCAGGATT...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCATTTTTGTCAGTTTTTaGAGAGAAGAGGGTCTCACT +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPIFVSF*REEGLT
Trigger: AGTGAGACCCTCTTCTCTGCAAAAACTGACAAAAAT...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCAAGATTCCTAAGGCTTaGTTCACATACAAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPKIPKA*FTYKRA
Trigger: TGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTT...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAATGTGATTGTATAGGGTaGAATCGGTCACTTACAAAA +
Preference number: 2 (lower is better)
Translates to: WPRISHLRSAPPHGIALKCDCIG*NRSLTK
Trigger: TTTTGTAAGTGACCGATTCCACCCTATACAATCACA...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGATACAAGCAAGCAATaGGGAAAGGAACACGTTGTT +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKDTSKQ*GKEHVV
Trigger: AACAACGTGTTCCTTTCCCCATTGCTTGCTTGTATC...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 90 bp GTAGTTTCCTATCGATTAGGGGAAACAGTCTGGTATAAGACATGGTaGGGAATCAGGGGACTAGGTTCTAATTCTGACTGTCATTCATTG +
Preference number: 2 (lower is better)
Translates to: VVSYRLGETVWYKTW*GIRGLGSNSDCHSL
Trigger: CAATGAATGACAGTCAGAATTAGAACCTAGTCCCCTGATTCCCAACCATGTCTTATACCAGACTGTTTCCCCTAATCGATAGGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 90 bp CTCCCATTTGTTAGAACATGCAGTACTTGGTTTTCTGTTCTTAATTaGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCA +
Preference number: 2 (lower is better)
Translates to: LPFVRTCSTWFSVLN*LRLWLPAVSMWLAA
Trigger: TGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTACTGCATGTTCTAACAAATGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGAAATCTCCGTATCTTaGCACACACATTTTAACGGA +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKEISVS*HTHFNG
Trigger: TCCGTTAAAATGTGTGTGTCAAGATACGGAGATTTC...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGGAGGAATCAGATTGTaGTTTGTAGCCTTTACATGC +
Preference number: 2 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWGGIRL*FVAFTC
Trigger: GCATGTAAAGGCTACAAATCACAATCTGATTCCTCC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTTGGGATTACAGGCGTaGACCACGGTGACTAGCTCA +
Preference number: 2 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSLGLQA*TTVTSS
Trigger: TGAGCTAGTCACCGTGGTTCACGCCTGTAATCCCAA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAAAGTTCTTATGCATTTaGGTGTCATACCACCTACAG +
Preference number: 2 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTKFLCI*VSYHLQ
Trigger: CTGTAGGTGGTATGACACTCAAATGCATAAGAACTT...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGATCACAAGCATCTACTaGAGACTGAAAGAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKITSIY*RLKEKA
Trigger: TGCTTTCTCTTTCAGTCTTCAGTAGATGCTTGTGAT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGAATCACATGAGGAGGTaGAACTGTAAAACGAAGGAA +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKNHMRR*NCKTKE
Trigger: TTCCTTCGTTTTACAGTTTCACCTCCTCATGTGATT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCACATCCAGGTCTTaGTTGATTCTCTGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTFTSRS*LILWRR
Trigger: CCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCAGAAAACCCTTCCAATaGCTCAGAATCCTGACTTAC +
Preference number: 2 (lower is better)
Translates to: KAFYSKGFLVSHILGHGARKPFQ*LRILTY
Trigger: GTAAGTCAGGATTCTGAGGCATTGGAAGGGTTTTCT...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTCACCCAGGCTGGAGTaGATTGGTGTGATCAGAGCT +
Preference number: 2 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSSPRLE*IGVIRA
Trigger: AGCTCTGATCACACCAATGCACTCCAGCCTGGGTGA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATTCAGGAGAGTTATGGTaGCAGCTGCTTCTGAGAAAT +
Preference number: 2 (lower is better)
Translates to: VSGEQDNKRINSARETQYSGELW*QLLLRN
Trigger: ATTTCTCAGAAGCAGCTGGCACCATAACTCTCCTGA...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAGGAAAAGAAAAAGCCTaGCTTCAAAGAGTTGTGATT +
Preference number: 2 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKGKEKA*LQRVVI
Trigger: AATCACAACTCTTTGAAGGCAGGCTTTTTCTTTTCC...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGCTCATTTCTTGTGTATaGTTCCTTTTCATGGCAGAT +
Preference number: 2 (lower is better)
Translates to: IAKATQSRKNKASSITQMLISCV*FLFMAD
Trigger: ATCTGCCATGAAAAGGAAGCATACACAAGAAATGAG...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTAACTCTTCTTCCTTTTaGAGCAACTGTTCATACAGC +
Preference number: 2 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCNSSSF*SNCSYS
Trigger: GCTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTT...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR-3UTR CCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGCATATAAAAGAATATaGCCTGGCTTCAACCCAAGC +
Preference number: 2 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTAYKRI*PGFNPS
Trigger: GCTTGGGTTGAAGCCAGGCCATATTCTTTTATATGC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTGTGTGCAACAGGGATaGCTACTGATCCCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSCVQQG*LLIPSR
Trigger: CCTAGAGGGGATCAGTAGCCATCCCTGTTGCACACA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGAGTGAGTCACATACTTaGTCATGGAGCCTTGGAATT +
Preference number: 2 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWSESHT*SWSLGI
Trigger: AATTCCAAGGCTCCATGACCAAGTATGTGACTCACT...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTACAGGAAAATCTTTTaGCTTGATCTGACTCCACTG +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYYRKIF*LDLTPL
Trigger: CAGTGGAGTCAGATCAAGCCAAAAGATTTTCCTGTA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGTTAGGGGAAACAGTCTaGTATAAGACATGGTTGGGA +
Preference number: 2 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWLGETV*YKTWLG
Trigger: TCCCAACCATGTCTTATACCAGACTGTTTCCCCTAA...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCCCAATGGACTATTTTTaGGGAATGCACATACATACA +
Preference number: 2 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCPMDYF*GMHIHT
Trigger: TGTATGTATGTGCATTCCCCAAAAATAGTCCATTGG...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACACTAACAATCTGCCAATaGACTATTTTTGGGGAATGC +
Preference number: 2 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTLTICQ*TIFGEC
Trigger: GCATTCCCCAAAAATAGTCCATTGGCAGATTGTTAG...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATAGACACGTAGACCAATaGAACACAATAGAGAACACA +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYRHVDQ*NTIENT
Trigger: TGTGTTCTCTATTGTGTTCCATTGGTCTACGTGTCT...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGAGCATCACACAGATGTaGCTTCAAACTATAAGACCA +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKSITQM*LQTIRP
Trigger: TGGTCTTATAGTTTGAAGCCACATCTGTGTGATGCT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp ATGGTTGAAATGCCTTCATTCTCTGAAACTGAGGTAGGTTCTTTAGCTGGGTTGGAAGTATTGTACCAGTaGATCTGGACAGGTGAAATG +
Preference number: 2 (lower is better)
Translates to: MVEMPSFSETEVGSLAGLEVLYQ*IWTGEM
Trigger: CATTTCACCTGTCCAGATCCACTGGTACAATACTTC...CAACCCAGCTAAAGAACCTACCTCAGTTTCAGAGAATGAAGGCATTTCAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR-3UTR TCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTGAAATCTCCGTATCTTaGCACACACATTTTAACGGA +
Preference number: 2 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSEISVS*HTHFNG
Trigger: TCCGTTAAAATGTGTGTGTCAAGATACGGAGATTTC...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR-3UTR TCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGTCTCAATGGCACATTaGGAAACAATGTGCACTAGT +
Preference number: 2 (lower is better)
Translates to: VSGEQDNKRINSARETQYVSMAH*ETMCTS
Trigger: ACTAGTGCACATTGTTTCTCAATGTGCCATTGAGAC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATCAGATTAAAGCTTGCTaGTGCTTTAATCTGAGCTTA +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYQIKAC*CFNLSL
Trigger: TAAGCTCAGATTAAAGCATCAGCAAGCTTTAATCTG...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGTGACCTATTTGTCATaGATTGATAAAAGGCCCACA +
Preference number: 2 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWVTYLS*IDKRPT
Trigger: TGTGGGCCTTTTATCAATTCATGACAAATAGGTCAC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAGCTGTCAGACTGTCATaGCCATGCACCAATCTCTTT +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPAVRLS*PCTNLF
Trigger: AAAGAGATTGGTGCATGGTCATGACAGTCTGACAGC...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGGCCGATTTAGTACTTaGTGGAATAAAGTTGCAAAA +
Preference number: 2 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKGRFST*WNKVAK
Trigger: TTTTGCAACTTTATTCCAGCAAGTACTAAATCGGCC...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATGGCCGATTTAGTACTTaGTGGAATAAAGTTGCAAAA +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYGRFST*WNKVAK
Trigger: TTTTGCAACTTTATTCCAGCAAGTACTAAATCGGCC...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGAAATGTACCCATTATaGAGTACTCCGTGTCAAGTT +
Preference number: 2 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTEMYPL*STPCQV
Trigger: AACTTGACACGGAGTACTCCATAATGGGTACATTTC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAGTACACCACTACAAGTaGCTAATTTTTGTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKVHHYK*LIFVSF
Trigger: AAAACTGACAAAAATTAGCCACTTGTAGTGGTGTAC...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAGCCTCTTGAGTAGCTaGGACTACAGGTGTACACCA +
Preference number: 2 (lower is better)
Translates to: STCWNKVAKCYSVTDLASSLLSS*DYRCTP
Trigger: TGGTGTACACCTGTAGTCCCAGCTACTCAAGAGGCT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGTACAGGAAAATCTTTTaGCTTGATCTGACTCCACTG +
Preference number: 2 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWYRKIF*LDLTPL
Trigger: CAGTGGAGTCAGATCAAGCCAAAAGATTTTCCTGTA...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATCCAATGGACTATTTTTaGGGAATGCACATACATACA +
Preference number: 2 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYPMDYF*GMHIHT
Trigger: TGTATGTATGTGCATTCCCCAAAAATAGTCCATTGG...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCATACAGCCGAACTaGATTCCAGCCAGTCATTAT +
Preference number: 2 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTFIQPN*IPASHY
Trigger: ATAATGACTGGCTGGAATCCAGTTCGGCTGTATGAA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR-3UTR TCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGAAATCTCCGTATCTTaGCACACACATTTTAACGGA +
Preference number: 2 (lower is better)
Translates to: FYSKGFLVSHILGHGALEEISVS*HTHFNG
Trigger: TCCGTTAAAATGTGTGTGTCAAGATACGGAGATTTC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACGGAGGAATCAGATTGTaGTTTGTAGCCTTTACATGC +
Preference number: 2 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYGGIRL*FVAFTC
Trigger: GCATGTAAAGGCTACAAATCACAATCTGATTCCTCC...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAAATGCCTCAGAATCCTaGCTTACTGTGCCTTGTGTC +
Preference number: 2 (lower is better)
Translates to: AKISSKAFYSKGFLVSHINASES*LTVPCV
Trigger: GACACAAGGCACAGTAAGTCAGGATTCTGAGGCATT...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAAATGCCTCAGAATCCTaGCTTACTGTGCCTTGTGTC +
Preference number: 2 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRNASES*LTVPCV
Trigger: GACACAAGGCACAGTAAGTCAGGATTCTGAGGCATT...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACGTGAGTATTCAGCATaGAGCATGTTCAGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPREYSA*SMFSVS
Trigger: ACTCACACTGAACATGCTTCATGCTGAATACTCACG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGATGCACCAGTTCCAGCTaGGAAAATCAGAACTGGACA +
Preference number: 2 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRCTSSS*ENQNWT
Trigger: TGTCCAGTTCTGATTTTCTCAGCTGGAACTGGTGCA...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACAGAAAACCCTTCCAATaGCTCAGAATCCTGACTTAC +
Preference number: 2 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYRKPFQ*LRILTY
Trigger: GTAAGTCAGGATTCTGAGGCATTGGAAGGGTTTTCT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGATTTTTGTCAGTTTTTaGAGAGAAGAGGGTCTCACT +
Preference number: 2 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTIFVSF*REEGLT
Trigger: AGTGAGACCCTCTTCTCTGCAAAAACTGACAAAAAT...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTTGCCTTGTGTCTCAATaGCACATTGAGAAACAATGT +
Preference number: 2 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSCLVSQ*HIEKQC
Trigger: ACATTGTTTCTCAATGTGCCATTGAGACACAAGGCA...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCCAAGAAGCTAGTACATaGGTTATTGAATGCACTCTT +
Preference number: 2 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAQEAST*VIECTL
Trigger: AAGAGTGCATTCAATAACCCATGTACTAGCTTCTTG...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGGAAACAATTACAGCTaGAGAAAACCCTTCCAATGC +
Preference number: 2 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRGNNYS*RKPFQC
Trigger: GCATTGGAAGGGTTTTCTTCAGCTGTAATTGTTTCC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACGATTCTACTATCTTATaGAGAAAGGAGGAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYDSTIL*RKEEVR
Trigger: TCTCACCTCCTCCTTTCTTCATAAGATAGTAGAATC...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGAAGCATGTTCAGTGTaGGTACTTCAAAAGATAACA +
Preference number: 2 (lower is better)
Translates to: VSGEQDNKRINSARETQYEACSV*VLQKIT
Trigger: TGTTATCTTTTGAAGTACTCACACTGAACATGCTTC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTTTCACATCCAGGTCTTaGTTGATTCTCTGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: EVKRKIPKACFTYKRAVIFTSRS*LILWRR
Trigger: CCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAA...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTTCACATCCAGGTCTTaGTTGATTCTCTGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSFTSRS*LILWRR
Trigger: CCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAATCCTGACTTACTGTaGCTTGTGTCTCAATGGCAC +
Preference number: 2 (lower is better)
Translates to: STCWNKVAKCYSVTDLASNPDLL*LVSQWH
Trigger: GTGCCATTGAGACACAAGGCACAGTAAGTCAGGATT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAAATCCTGACTTACTGTaGCTTGTGTCTCAATGGCAC +
Preference number: 2 (lower is better)
Translates to: AKISSKAFYSKGFLVSHINPDLL*LVSQWH
Trigger: GTGCCATTGAGACACAAGGCACAGTAAGTCAGGATT...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACTGTTTTGTTGCAATTaGCTTTGGGGACTTAGCCAA +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPLFCCN*LWGLSQ
Trigger: TTGGCTAAGTCCCCAAAGGCAATTGCAACAAAACAG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAATGAGCTGCCACACCTaGCCAAAATCCAGTATATTT +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPMSCHT*PKSSIF
Trigger: AAATATACTGGATTTTGGCCAGGTGTGGCAGCTCAT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATCCAATGGACTATTTTTaGGGAATGCACATACATACA +
Preference number: 2 (lower is better)
Translates to: VSGEQDNKRINSARETQYPMDYF*GMHIHT
Trigger: TGTATGTATGTGCATTCCCCAAAAATAGTCCATTGG...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp TCAAGAGAGTTCAGATTGGATCTAAATTGGGTTTTGCATCATCATCGTGCTCATTGGGTTGAGAAAGCTTaGCTTCATATGTTCATAAGG +
Preference number: 2 (lower is better)
Translates to: SREFRLDLNWVLHHHRAHWVEKA*LHMFIR
Trigger: CCTTATGAACATATGAAGCCAAGCTTTCTCAACCCA...ATGAGCACGATGATGATGCAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR CAA 90 bp TGTTCCCACCTTTGCATCCTGAGGTACTCAATATTTAGCTCCCATTaGTTAGAACATGCAGTACTTGGTTTTCTGTTCTTAATTTGCTTA +
Preference number: 2 (lower is better)
Translates to: CSHLCILRYSIFSSH*LEHAVLGFLFLICL
Trigger: TAAGCAAATTAAGAACAGAAAACCAAGTACTGCATGTTCTAACAAATGGGAGCTAAATATTGAGTACCTCAGGATGCAAAGGTGGGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 90 bp TTTAGGCCATTCATGTCCTTCAAGAGAGTTCAGATTGGATCTAAATaGGGTTTTGCATCATCATCGTGCTCATGTTTATACATGAAGGTT +
Preference number: 2 (lower is better)
Translates to: FRPFMSFKRVQIGSK*GFASSSCSCLYMKV
Trigger: AACCTTCATGTATAAACATGAGCACGATGATGATGCAAAACCCAATTTAGATCCAATCTGAACTCTCTTGAAGGACATGAATGGCCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAGAAATCTCCGTATCTTaGCACACACATTTTAACGGA +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPEISVS*HTHFNG
Trigger: TCCGTTAAAATGTGTGTGTCAAGATACGGAGATTTC...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTGGAGGAATCAGATTGTaGTTTGTAGCCTTTACATGC +
Preference number: 2 (lower is better)
Translates to: STCWNKVAKCYSVTDLASGGIRL*FVAFTC
Trigger: GCATGTAAAGGCTACAAATCACAATCTGATTCCTCC...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGGAGGAATCAGATTGTaGTTTGTAGCCTTTACATGC +
Preference number: 2 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIGGIRL*FVAFTC
Trigger: GCATGTAAAGGCTACAAATCACAATCTGATTCCTCC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGGAAACAATTACAGCTaGAGAAAACCCTTCCAATGC +
Preference number: 2 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIGNNYS*RKPFQC
Trigger: GCATTGGAAGGGTTTTCTTCAGCTGTAATTGTTTCC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAGGAAACAATTACAGCTaGAGAAAACCCTTCCAATGC +
Preference number: 2 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRGNNYS*RKPFQC
Trigger: GCATTGGAAGGGTTTTCTTCAGCTGTAATTGTTTCC...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTGGAAACAATTACAGCTaGAGAAAACCCTTCCAATGC +
Preference number: 2 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSGNNYS*RKPFQC
Trigger: GCATTGGAAGGGTTTTCTTCAGCTGTAATTGTTTCC...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACTAAAAGGTCACATGTaGATCAAGTCATTGAACAGC +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPLKGHM*IKSLNS
Trigger: GCTGTTCAATGACTTGATTCACATGTGACCTTTTAG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAATCACAAGCATCTACTaGAGACTGAAAGAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPITSIY*RLKEKA
Trigger: TGCTTTCTCTTTCAGTCTTCAGTAGATGCTTGTGAT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAAATCACATGAGGAGGTaGAACTGTAAAACGAAGGAA +
Preference number: 2 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRNHMRR*NCKTKE
Trigger: TTCCTTCGTTTTACAGTTTCACCTCCTCATGTGATT...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAGAACAGTTTTGGAGGTaGCCTATTTGTCATGAATTG +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPEQFWR*PICHEL
Trigger: CAATTCATGACAAATAGGTCACCTCCAAAACTGTTC...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAAGAAAACCCTTCCAATaGCTCAGAATCCTGACTTAC +
Preference number: 2 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRRKPFQ*LRILTY
Trigger: GTAAGTCAGGATTCTGAGGCATTGGAAGGGTTTTCT...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGATCTTGCTTGATTCTCTaGAGAAGGTTTTGTCAGACT +
Preference number: 2 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRSCLIL*RRFCQT
Trigger: AGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGA...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGCCTTGTGTCTCAATaGCACATTGAGAAACAATGT +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPCLVSQ*HIEKQC
Trigger: ACATTGTTTCTCAATGTGCCATTGAGACACAAGGCA...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGTACACCACTACAAGTaGCTAATTTTTGTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: VSGEQDNKRINSARETQYVHHYK*LIFVSF
Trigger: AAAACTGACAAAAATTAGCCACTTGTAGTGGTGTAC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTGCATATAAAAGAATATaGCCTGGCTTCAACCCAAGC +
Preference number: 2 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSAYKRI*PGFNPS
Trigger: GCTTGGGTTGAAGCCAGGCCATATTCTTTTATATGC...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTAGTGAGTCACATACTTaGTCATGGAGCCTTGGAATT +
Preference number: 2 (lower is better)
Translates to: EVKRKIPKACFTYKRAVISESHT*SWSLGI
Trigger: AATTCCAAGGCTCCATGACCAAGTATGTGACTCACT...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 90 bp CATATTCTAGTGGTTAAGAATAAATCCCTTCAAGTTCTTATGCATTaGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTA +
Preference number: 2 (lower is better)
Translates to: HILVVKNKSLQVLMH*SVIPPTATYAQVPL
Trigger: TAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTTATTCTTAACCACTAGAATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTGATTCTACTATCTTATaGAGAAAGGAGGAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSDSTIL*RKEEVR
Trigger: TCTCACCTCCTCCTTTCTTCATAAGATAGTAGAATC...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGATTCTACTATCTTATaGAGAAAGGAGGAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIDSTIL*RKEEVR
Trigger: TCTCACCTCCTCCTTTCTTCATAAGATAGTAGAATC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAAGTTCTTATGCATTTaGGTGTCATACCACCTACAG +
Preference number: 2 (lower is better)
Translates to: STCWNKVAKCYSVTDLASKFLCI*VSYHLQ
Trigger: CTGTAGGTGGTATGACACTCAAATGCATAAGAACTT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACAGATTAAAGCTTGCTaGTGCTTTAATCTGAGCTTA +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPQIKAC*CFNLSL
Trigger: TAAGCTCAGATTAAAGCATCAGCAAGCTTTAATCTG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATTTCATGGAGTTTGCTaGCTTTCACTTCACTTTTCA +
Preference number: 2 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPFHGVC*LSLHFS
Trigger: TGAAAAGTGAAGTGAAAGGCAGCAAACTCCATGAAA...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGATTTCATGGAGTTTGCTaGCTTTCACTTCACTTTTCA +
Preference number: 2 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRFHGVC*LSLHFS
Trigger: TGAAAAGTGAAGTGAAAGGCAGCAAACTCCATGAAA...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGGAAAAGAAAAAGCCTaGCTTCAAAGAGTTGTGATT +
Preference number: 2 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRGKEKA*LQRVVI
Trigger: AATCACAACTCTTTGAAGGCAGGCTTTTTCTTTTCC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATATCTTGCTTGATTCTCTaGAGAAGGTTTTGTCAGACT +
Preference number: 2 (lower is better)
Translates to: AKISSKAFYSKGFLVSHISCLIL*RRFCQT
Trigger: AGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGA...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGACTAACAATCTGCCAATaGACTATTTTTGGGGAATGC +
Preference number: 2 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRLTICQ*TIFGEC
Trigger: GCATTCCCCAAAAATAGTCCATTGGCAGATTGTTAG...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR GCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTTTGTAGCCTTTACATaGAGTTTACCCAAACCTTCT +
Preference number: 2 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSFVAFT*SLPKPS
Trigger: AGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACAAGAAGCTAGTACATaGGTTATTGAATGCACTCTT +
Preference number: 2 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIQEAST*VIECTL
Trigger: AAGAGTGCATTCAATAACCCATGTACTAGCTTCTTG...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 72 bp AGGTTGGGCAGGCTGTGGGGAGCCTTGAGTGACAGATaGCATCATCAAAGGGCTTTGGTTGTCATCAGACCT +
Preference number: 3 (lower is better)
Translates to: RLGRLWGALSDR*HHQRALVVIRP
Trigger: AGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGCTCCCCACAGCCTGCCCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 72 bp CAACATCCAAGGATGACCAATAGGCAGTATGCGACGTaGCAGCTGACCAATAGCGGCTCTCCACAAGGCCTT +
Preference number: 3 (lower is better)
Translates to: QHPRMTNRQYAT*QLTNSGSPQGL
Trigger: AAGGCCTTGTGGAGAGCCGCTATTGGTCAGCTGTCACGTCGCATACTGCCTATTGGTCATCCTTGGATGTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR CCA 72 bp TCCATGTCACAGGAAAGGGTGGAGTTTTGCCATGGATaGCTCCATCCTCATATCACCCCATGTGCCACTGGA +
Preference number: 3 (lower is better)
Translates to: SMSQERVEFCHG*LHPHITPCATG
Trigger: TCCAGTGGCACATGGGGTGATATGAGGATGGAGCCATCCATGGCAAAACTCCACCCTTTCCTGTGACATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAAGTAATCTTCCCTGCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: SSDVLEGVVATSLPSRTESNLPC*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGCAGGGAAGATTACT...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGGAGCTCACTGCAGCTTaGAACTTCTGGGCTCGGGTG +
Preference number: 3 (lower is better)
Translates to: IAKATQSRKNKASSITQMELTAA*NFWARV
Trigger: CACCCGAGCCCAGAAGTTCAAAGCTGCAGTGAGCTC...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 72 bp GACCGCAGTGGGTGTGGGTACAGTCAAGGGAAGGTATaGGTGACGCTCCTAGATATTCAATGTCTTCCAGGA +
Preference number: 3 (lower is better)
Translates to: DRSGCGYSQGKV*VTLLDIQCLPG
Trigger: TCCTGGAAGACATTGAATATCTAGGAGCGTCACTCATACCTTCCCTTGACTGTACCCACACCCACTGCGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAATTGCCCAAGCTGGTCTaGAAATCCTGGGCTCAAGAG +
Preference number: 3 (lower is better)
Translates to: WPRISHLRSAPPHGIALKLPKLV*KSWAQE
Trigger: CTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCAA...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAAGTAATCTTCCCTGCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKSNLPC*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGCAGGGAAGATTACT...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 72 bp TGGATGGCTCCATCCTCATATCACCCCATGTGCCACTaGATTGTGTTTAACAGCCATAGAAGGCTACCTGCA +
Preference number: 3 (lower is better)
Translates to: WMAPSSYHPMCH*IVFNSHRRLPA
Trigger: TGCAGGTAGCCTTCTATGGCTGTTAAACACAATCCAGTGGCACATGGGGTGATATGAGGATGGAGCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 72 bp ATAATCCATGTCACAGGAAAGGGTGGAGTTTTGCCATaGATGGCTCCATCCTCATATCACCCCATGTGCCAC +
Preference number: 3 (lower is better)
Translates to: IIHVTGKGGVLP*MAPSSYHPMCH
Trigger: GTGGCACATGGGGTGATATGAGGATGGAGCCATCCATGGCAAAACTCCACCCTTTCCTGTGACATGGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAATTGCCCAAGCTGGTCTaGAAATCCTGGGCTCAAGAG +
Preference number: 3 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKLPKLV*KSWAQE
Trigger: CTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCAA...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGGTATAAGACATGGTaGGGAATCAGGGGACTAGGT +
Preference number: 3 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEWYKTW*GIRGLG
Trigger: ACCTAGTCCCCTGATTCCCAACCATGTCTTATACCA...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCAATGAACGTCCAAATCTaGAGAACAACATTCCTCCAA +
Preference number: 3 (lower is better)
Translates to: SRKPELLCGRVCVPTVVAMNVQI*RTTFLQ
Trigger: TTGGAGGAATGTTGTTCTCAAGATTTGGACGTTCAT...TGCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR GCA 72 bp TTGCCATGGATGGCTCCATCCTCATATCACCCCATGTaGCACTGGATTGTGTTTAACAGCCATAGAAGGCTA +
Preference number: 3 (lower is better)
Translates to: LPWMAPSSYHPM*HWIVFNSHRRL
Trigger: TAGCCTTCTATGGCTGTTAAACACAATCCAGTGGCACATGGGGTGATATGAGGATGGAGCCATCCATGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR GCA 72 bp AAATATGGTCTTGACTTCCAGTATTTCCTGGGCGGATaGCACGCAACGCCAAGAAAACTGCTAATGGGGATC +
Preference number: 3 (lower is better)
Translates to: KYGLDFQYFLGG*HATPRKLLMGI
Trigger: GATCCCCATTAGCAGTTTTCTTGGCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGTCAAGACCATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR-3UTR CAA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATGGCACTTTAAATGTTTaGGTGCCTTGGTGTATTAAC +
Preference number: 3 (lower is better)
Translates to: ELWPLAFLVERNVAATADGTLNV*VPWCIN
Trigger: GTTAATACACCAAGGCACCAAAACATTTAAAGTGCC...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGAGCTCACTGCAGCTTaGAACTTCTGGGCTCGGGTG +
Preference number: 3 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSELTAA*NFWARV
Trigger: CACCCGAGCCCAGAAGTTCAAAGCTGCAGTGAGCTC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAGTTGGTTTTCAACTCTaGGGCTCAAGTAATCTTCCC +
Preference number: 3 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEVGFQL*GSSNLP
Trigger: GGGAAGATTACTTGAGCCCAAGAGTTGAAAACCAAC...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGTGGCTCACTGAAGCCTaGACCTCCCGGAATCATGCA +
Preference number: 3 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWWLTEA*TSRNHA
Trigger: TGCATGATTCCGGGAGGTCAAGGCTTCAGTGAGCCA...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGCCCAAGCTGGTCTaGAAATCCTGGGCTCAAGAG +
Preference number: 3 (lower is better)
Translates to: KAFYSKGFLVSHILGHGALPKLV*KSWAQE
Trigger: CTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCAA...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGGTAGGGCACAACTACTaGTTTCGGGTGAGCAAGATA +
Preference number: 3 (lower is better)
Translates to: IAKATQSRKNKASSITQMVGHNY*FRVSKI
Trigger: TATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTAC...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 72 bp AACGGAAGTCTGTCCAGACCTGATAGGGTACTCTTATaGGAGTCTGGAAGAAAGAAGGGACCAACTGCTAAC +
Preference number: 3 (lower is better)
Translates to: NGSLSRPDRVLL*ESGRKKGPTAN
Trigger: GTTAGCAGTTGGTCCCTTCTTTCTTCCAGACTCTCATAAGAGTACCCTATCAGGTCTGGACAGACTTCCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 72 bp AACCGGTTACAAATCTCTCTAGGCAAAATATGGTCTTaGCTTCCAGTATTTCCTGGGCGGATGCCACGCAAC +
Preference number: 3 (lower is better)
Translates to: NRLQISLGKIWS*LPVFPGRMPRN
Trigger: GTTGCGTGGCATCCGCCCAGGAAATACTGGAAGTCAAGACCATATTTTGCCTAGAGAGATTTGTAACCGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR GCA 72 bp CTCATCCATCGTTCATCAGGCAACTCTTCTTCCTTTTaGAGCAACTGTTCATACAGCCGAACTGGATTCCAG +
Preference number: 3 (lower is better)
Translates to: LIHRSSGNSSSF*SNCSYSRTGFQ
Trigger: CTGGAATCCAGTTCGGCTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTTGCCTGATGAACGATGGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR CCA 72 bp ATGGCAGATGCACATAATCCATGTCACAGGAAAGGGTaGAGTTTTGCCATGGATGGCTCCATCCTCATATCA +
Preference number: 3 (lower is better)
Translates to: MADAHNPCHRKG*SFAMDGSILIS
Trigger: TGATATGAGGATGGAGCCATCCATGGCAAAACTCCACCCTTTCCTGTGACATGGATTATGTGCATCTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATCTGACTTACTGTGCCTaGTGTCTCAATGGCACATTG +
Preference number: 3 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYLTYCA*CLNGTL
Trigger: CAATGTGCCATTGAGACACAAGGCACAGTAAGTCAG...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAAGTTTTTCATGGAGTTaGCTGCCTTTCACTTCACTT +
Preference number: 3 (lower is better)
Translates to: SSDVLEGVVATSLPSRTESFSWS*LPFTSL
Trigger: AAGTGAAGTGAAAGGCAGCAAACTCCATGAAAAACT...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCTCATGTACTCATCTCTaGACCATGGTACAGACAGTG +
Preference number: 3 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCSCTHL*TMVQTV
Trigger: CACTGTCTGTACCATGGTCAAGAGATGAGTACATGA...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGTCATGTACTCATCTCTaGACCATGGTACAGACAGTG +
Preference number: 3 (lower is better)
Translates to: IAKATQSRKNKASSITQMSCTHL*TMVQTV
Trigger: CACTGTCTGTACCATGGTCAAGAGATGAGTACATGA...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 72 bp AGCCATCTACAACCAACCCACAGACATCATACTGGATaGGCAAAAGCTGGAACTATTCCTTCTGAGAACTGG +
Preference number: 3 (lower is better)
Translates to: SHLQPTHRHHTG*AKAGTIPSENW
Trigger: CCAGTTCTCAGAAGGAATAGTTCCAGCTTTTGCTCATCCAGTATGATGTCTGTGGGTTGGTTGTAGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR GCA 72 bp AGTGTTCCAGTCTGCAGTGTCTGTTGTTCCCACCTTTaGATCCTGAGGTACTCAATATTTAGCTCCCATTTG +
Preference number: 3 (lower is better)
Translates to: SVPVCSVCCSHL*ILRYSIFSSHL
Trigger: CAAATGGGAGCTAAATATTGAGTACCTCAGGATGCAAAGGTGGGAACAACAGACACTGCAGACTGGAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 72 bp TGTCCCATCTCAATTCTACATGTAGTCCTTATAGCCTaGCCACGTATTTCTCATCTAAGGTCAGCACCACCT +
Preference number: 3 (lower is better)
Translates to: CPISILHVVLIA*PRISHLRSAPP
Trigger: AGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCAGGCTATAAGGACTACATGTAGAATTGAGATGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGCTTCACATCCAGGTCTaGCTTGATTCTCTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWLHIQV*LDSLEK
Trigger: CTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAG...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCCTGACTTACTGTGCCTaGTGTCTCAATGGCACATTG +
Preference number: 3 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFLTYCA*CLNGTL
Trigger: CAATGTGCCATTGAGACACAAGGCACAGTAAGTCAG...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGATGGCTCACTGAAGCCTaGACCTCCCGGAATCATGCA +
Preference number: 3 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRWLTEA*TSRNHA
Trigger: TGCATGATTCCGGGAGGTCAAGGCTTCAGTGAGCCA...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 72 bp GCAGGTGTTTGTGTCATAGATGATGCTTTCAATCCGTaGAGCCGTTCTTCTATTTCCTTCAGCCGTCGTTTA +
Preference number: 3 (lower is better)
Translates to: AGVCVIDDAFNP*SRSSISFSRRL
Trigger: TAAACGACGGCTGAAGGAAATAGAAGAACGGCTTCACGGATTGAAAGCATCATCTATGACACAAACACCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR CCA 72 bp TTAGGAGTAGTTTCCTATCGATTAGGGGAAACAGTCTaGTATAAGACATGGTTGGGAATCAGGGGACTAGGT +
Preference number: 3 (lower is better)
Translates to: LGVVSYRLGETV*YKTWLGIRGLG
Trigger: ACCTAGTCCCCTGATTCCCAACCATGTCTTATACCAGACTGTTTCCCCTAATCGATAGGAAACTACTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: KAFYSKGFLVSHILGHGATSRSC*ILWRRF
Trigger: AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGT...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCAACTTTGCTCCCAGTTaGACAATGATTATTGGGAAG +
Preference number: 3 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCNFAPS*TMIIGK
Trigger: CTTCCCAATAATCATTGTCAAACTGGGAGCAAAGTT...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAAGTAATCTTCCCTGCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRSNLPC*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGCAGGGAAGATTACT...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGTTGGTTTTCAACTCTaGGGCTCAAGTAATCTTCCC +
Preference number: 3 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWVGFQL*GSSNLP
Trigger: GGGAAGATTACTTGAGCCCAAGAGTTGAAAACCAAC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCAGTTTTTCATGGAGTTaGCTGCCTTTCACTTCACTT +
Preference number: 3 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCSFSWS*LPFTSL
Trigger: AAGTGAAGTGAAAGGCAGCAAACTCCATGAAAAACT...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 72 bp AGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTaGTGCATAGGGAGATCTTTCAATTTTCATAAACTT +
Preference number: 3 (lower is better)
Translates to: SLPSRTECGSHS*CIGRSFNFHKL
Trigger: AAGTTTATGAAAATTGAAAGATCTCCCTATGCATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR GCA 72 bp ATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTaGTTGATTCTCTGGAGAAGGTTTTGTCAGACTCAT +
Preference number: 3 (lower is better)
Translates to: MQFTQTFFTSRS*LILWRRFCQTH
Trigger: ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR GCA 72 bp AAAACCCTTCCAATGCCTCAGAATCCTGACTTACTGTaGCTTGTGTCTCAATGGCACATTGAGAAACAATGT +
Preference number: 3 (lower is better)
Translates to: KTLPMPQNPDLL*LVSQWHIEKQC
Trigger: ACATTGTTTCTCAATGTGCCATTGAGACACAAGGCACAGTAAGTCAGGATTCTGAGGCATTGGAAGGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR GCA 72 bp CAGTTCTCCAGGAACTCTTGGCTCATTTCTTGTGTATaGTTCCTTTTCATGGCAGATGCACATAATCCATGT +
Preference number: 3 (lower is better)
Translates to: QFSRNSWLISCV*FLFMADAHNPC
Trigger: ACATGGATTATGTGCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 72 bp ACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATaGCAGATGCACATAATCCATGTCACAGGAAAGGGT +
Preference number: 3 (lower is better)
Translates to: TLGSFLVYASFS*QMHIIHVTGKG
Trigger: ACCCTTTCCTGTGACATGGATTATGTGCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTTSRSC*ILWRRF
Trigger: AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGT...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR-3UTR CAA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACCTGACTTACTGTGCCTaGTGTCTCAATGGCACATTG +
Preference number: 3 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYLTYCA*CLNGTL
Trigger: CAATGTGCCATTGAGACACAAGGCACAGTAAGTCAG...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGTTTTTCCTGGGTATTTaGAATCTGAGGCATAAACGG +
Preference number: 3 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKFFLGI*NLRHKR
Trigger: CCGTTTATGCCTCAGATTCAAAATACCCAGGAAAAA...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTGGGGAGGAAGCAAGTaGTACCATGTTACATATAAA +
Preference number: 3 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYWGGSK*YHVTYK
Trigger: TTTATATGTAACATGGTACAACTTGCTTCCTCCCCA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GAGTTCAAAATCAATCCTGTGATCCAACTCCAATGCAGAATCGAGGAAGCCAGAAAAGGATTTGAAGTATaGTACCAGTGGATCTGGACA +
Preference number: 3 (lower is better)
Translates to: EFKINPVIQLQCRIEEARKGFEV*YQWIWT
Trigger: TGTCCAGATCCACTGGTACAATACTTCAAATCCTTT...TCTGGCTTCCTCGATTCTGCATTGGAGTTGGATCACAGGATTGATTTTGAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR CCA 72 bp AGTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATaGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: STWFSVLNLLRL*LPAVSMWLAAK
Trigger: CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCAACTTTGCTCCCAGTTaGACAATGATTATTGGGAAG +
Preference number: 3 (lower is better)
Translates to: KAFYSKGFLVSHILGHGANFAPS*TMIIGK
Trigger: CTTCCCAATAATCATTGTCAAACTGGGAGCAAAGTT...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGAACTTTGCTCCCAGTTaGACAATGATTATTGGGAAG +
Preference number: 3 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWNFAPS*TMIIGK
Trigger: CTTCCCAATAATCATTGTCAAACTGGGAGCAAAGTT...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGAGTTTTTCATGGAGTTaGCTGCCTTTCACTTCACTT +
Preference number: 3 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWSFSWS*LPFTSL
Trigger: AAGTGAAGTGAAAGGCAGCAAACTCCATGAAAAACT...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAGTAGGGCACAACTACTaGTTTCGGGTGAGCAAGATA +
Preference number: 3 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPVGHNY*FRVSKI
Trigger: TATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTAC...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGTTCTGTGCCTATTTCTaGTCTAATCATTGTGGCTTA +
Preference number: 3 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKFCAYF*SNHCGL
Trigger: TAAGCCACAATGATTAGACAAGAAATAGGCACAGAA...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPTSRSC*ILWRRF
Trigger: AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 72 bp AGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTaGTTCTCTGGAGAAGGTTTTGTCAGACTCATAATT +
Preference number: 3 (lower is better)
Translates to: SLPKPSSHPGLA*FSGEGFVRLII
Trigger: AATTATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR TCA 72 bp CTATGGTCACTGACTGAACCCTGGACTGAGAAATTGTaGATGAACCATAATCAGAATATGCCTGTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: LWSLTEPWTEKL*MNHNQNMPVFS
Trigger: AGAAAAGACAGGCATATTCTGATTATGGTTCATTCACAATTTCTCAGTCCAGGGTTCAGTCAGTGACCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: AKISSKAFYSKGFLVSHITSRSC*ILWRRF
Trigger: AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGT...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACAATTTTTGTCAGTTTTaGCAGAGAAGAGGGTCTCAC +
Preference number: 3 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYNFCQF*QRRGSH
Trigger: GTGAGACCCTCTTCTCTGCAAAAACTGACAAAAATT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAAGGGAAACAAAAAGTTaGAGAGATCAAGCAGGGACC +
Preference number: 3 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRRETKS*RDQAGT
Trigger: GGTCCCTGCTTGATCTCTCAAACTTTTTGTTTCCCT...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGATCATGTACTCATCTCTaGACCATGGTACAGACAGTG +
Preference number: 3 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRSCTHL*TMVQTV
Trigger: CACTGTCTGTACCATGGTCAAGAGATGAGTACATGA...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR TCA 72 bp TGGTTAAGAATAAATCCCTTCAAGTTCTTATGCATTTaGGTGTCATACCACCTACAGCAACATACGCTCAAG +
Preference number: 3 (lower is better)
Translates to: WLRINPFKFLCI*VSYHLQQHTLK
Trigger: CTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTTATTCTTAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR GCA 72 bp AATGGCCATACTGCCCAAAGCAATTTACAGAATCAATaGTGTCCTATCAAACTACCAACCTCATTTTTCACA +
Preference number: 3 (lower is better)
Translates to: NGHTAQSNLQNQ*CPIKLPTSFFT
Trigger: TGTGAAAAATGAGGTTGGTAGTTTGATAGGACAGCATTGATTCTGTAAATTGCTTTGGGCAGTATGGCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGGCACTTTAAATGTTTaGGTGCCTTGGTGTATTAAC +
Preference number: 3 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRGTLNV*VPWCIN
Trigger: GTTAATACACCAAGGCACCAAAACATTTAAAGTGCC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAACTTTTAAAGTCACTTaGGTAGCAAAGGTGGGGGAA +
Preference number: 3 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRTFKVT*VAKVGE
Trigger: TTCCCCCACCTTTGCTACCAAAGTGACTTTAAAAGT...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp GTGAAATGTTGCTGTAGTGTTTCAGTATTAATGGTTCTAATCTATAAGCCACTGCAACTCTTCTTCCTTTaGCAGCAACTGTTCATACAG +
Preference number: 3 (lower is better)
Translates to: VKCCCSVSVLMVLIYKPLQLFFL*QQLFIQ
Trigger: CTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTTG...CAGTGGCTTATAGATTAGAACCATTAATACTGAAACACTACAGCAACATTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR TCA 72 bp TTCCATATGCCTTTATATTTGGGAGGAATCAGATTGTaGTTTGTAGCCTTTACATGCAGTTTACCCAAACCT +
Preference number: 3 (lower is better)
Translates to: FHMPLYLGGIRL*FVAFTCSLPKP
Trigger: AGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAATATAAAGGCATATGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR TCA 72 bp AAAAGCCTGCCTTCAAAGAGTTGTGATTGCAGTCATTaGCAACATTTAGTAGTGTTAGAGAGAGTGAACATA +
Preference number: 3 (lower is better)
Translates to: KSLPSKSCDCSH*QHLVVLERVNI
Trigger: TATGTTCACTCTCTCTAACACTACTAAATGTTGTCAATGACTGCAATCACAACTCTTTGAAGGCAGGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CCA 72 bp TCATGTCCTTCAAGAGAGTTCAGATTGGATCTAAATTaGGTTTTGCATCATCATCGTGCTCATGTTTATACA +
Preference number: 3 (lower is better)
Translates to: SCPSREFRLDLN*VLHHHRAHVYT
Trigger: TGTATAAACATGAGCACGATGATGATGCAAAACCCAATTTAGATCCAATCTGAACTCTCTTGAAGGACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
3UTR-3UTR CAA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTCAAGTTCTTATGCATTaGAGTGTCATACCACCTACA +
Preference number: 3 (lower is better)
Translates to: STCWNKVAKCYSVTDLASQVLMH*SVIPPT
Trigger: TGTAGGTGGTATGACACTCAAATGCATAAGAACTTG...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR-3UTR CAA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGACTCTTGGCTCATTTCTaGTGTATGCTTCCTTTTCAT +
Preference number: 3 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRLLAHF*CMLPFH
Trigger: ATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAG...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR GCA 72 bp AAGTATTGTACCAGTGGATCTGGACAGGTGAAATGTTaGTGTAGTGTTTCAGTATTAATGGTTCTAATCTAT +
Preference number: 3 (lower is better)
Translates to: KYCTSGSGQVKC*CSVSVLMVLIY
Trigger: ATAGATTAGAACCATTAATACTGAAACACTACAGCAACATTTCACCTGTCCAGATCCACTGGTACAATACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCCGCTGGCCTCGCGTCTaGGCCCAGCTCCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCRWPRV*AQLPGA
Trigger: GGCGCCTGGGAGCTGGGCTCAGACGCGAGGCCAGCG...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATCCCCGCCGGGCAGGTaGTCGAAGCAGCAGACGCCG +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTESPPGR*SKQQTP
Trigger: CGGCGTCTGCTGCTTCGAGCACCTGCCCGGCGGGGA...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGTGCCCGGCGCCAAATaGAGCCCGGGTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKVPGAK*SPGSPR
Trigger: GCGCGGGGAACCCGGGCTGCATTTGGCGCCGGGCAC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGGGGCCGGGCACCCGTaGTCTGCAGCAGGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKGAGHP*SAAGSG
Trigger: TCCGGACCCTGCTGCAGACCACGGGTGCCCGGCCCC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395606.5
ENST00000673822.2
CDS-3UTR GCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTCCCCGCCGGGCAGGTaGTCGAAGCAGCAGACGCCG +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPSPPGR*SKQQTP
Trigger: CGGCGTCTGCTGCTTCGAGCACCTGCCCGGCGGGGA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGCGAGGTGGTGGTTGTaGTCGTCGGTGCCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKARWWL*SSVPGA
Trigger: GGCGCCGGGCACCGACGACCACAACCACCACCTCGC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAAATCCCGACCCGAGCTaGGGCGGCAGCGGCGACCGC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSNPDPS*GGSGDR
Trigger: GCGGTCGCCGCTGCCGCCGCAGCTCGGGTCGGGATT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357758.3
ENST00000673822.2
CDS-3UTR GCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTGTGCCCGGCGCCAAATaGAGCCCGGGTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCVPGAK*SPGSPR
Trigger: GCGCGGGGAACCCGGGCTGCATTTGGCGCCGGGCAC...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGGGACCAGCGGAGGCTaGTGCGGCGGGTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSGTSGG*CGGCSD
Trigger: GTCGCTGCACCCGCCGCAGCAGCCTCCGCTGGTCCC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAATGCTCGGGGCTCCGTaGGGACCCGCGGCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSMLGAP*GPAARV
Trigger: TACCCGGGCCGCGGGTCCCCACGGAGCCCCGAGCAT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTATGCTCGGGGCTCCGTaGGGACCCGCGGCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCMLGAP*GPAARV
Trigger: TACCCGGGCCGCGGGTCCCCACGGAGCCCCGAGCAT...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGCGAGGTGGTGGTTGTaGTCGTCGGTGCCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCARWWL*SSVPGA
Trigger: GGCGCCGGGCACCGACGACCACAACCACCACCTCGC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp GGCAGGAGAGTCAGGTTGGGCAGGCTGTGGGGAGCCTaGAGTGACAGATGGCATCATCAAAGGGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: GRRVRLGRLWGA*SDRWHHQRALV
Trigger: AACCAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGCTCCCCACAGCCTGCCCAACCTGACTCTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGCCGCCTCGGCCGTTATaGTCGGGGCTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKPPRPL*SGLRGD
Trigger: GTCCCCACGGAGCCCCGAGCATAACGGCCGAGGCGG...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATCCCCGCCGGGCAGGTaGTCGAAGCAGCAGACGCCG +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSSPPGR*SKQQTP
Trigger: CGGCGTCTGCTGCTTCGAGCACCTGCCCGGCGGGGA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGGCTGCTGCGGCGGGTaGAGCGACAAGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTGCCGG*SDKELP
Trigger: CGGCAGCTCCTTGTCGCTGCACCCGCCGCAGCAGCC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGGGACCAGCGGAGGCTaGTGCGGCGGGTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHGTSGG*CGGCSD
Trigger: GTCGCTGCACCCGCCGCAGCAGCCTCCGCTGGTCCC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAGGAAGGCGAGCTCGATaGGGAGCGAGTCGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEGRRAR*GASRSR
Trigger: TCGGCTACGACTCGCTCCGCATCGAGCTCGCCTTCC...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGATGCTCGGGGCTCCGTaGGGACCCGCGGCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTMLGAP*GPAARV
Trigger: TACCCGGGCCGCGGGTCCCCACGGAGCCCCGAGCAT...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGGGTCCAGCGCGAGGTaGTGGTTGTGGTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPGSSAR*WLWSSV
Trigger: CACCGACGACCACAACCACCACCTCGCGCTGGACCC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGGGGCCGGGCACCCGTaGTCTGCAGCAGGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSGAGHP*SAAGSG
Trigger: TCCGGACCCTGCTGCAGACCACGGGTGCCCGGCCCC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTGTGGGGGAGCACACATaGTCGCCGTCCCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCVGEHT*SPSRSP
Trigger: CGGGGACCGGGACGGCGACCATGTGTGCTCCCCCAC...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGTGGGGGAGCACACATaGTCGCCGTCCCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTVGEHT*SPSRSP
Trigger: CGGGGACCGGGACGGCGACCATGTGTGCTCCCCCAC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATAAGCAGGGACCGCAGTaGGTGTGGGTACAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADKQGPQ*VWVQSR
Trigger: CCTTGACTGTACCCACACCCACTGCGGTCCCTGCTT...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGTGCCCGGCGCCAAATaGAGCCCGGGTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEVPGAK*SPGSPR
Trigger: GCGCGGGGAACCCGGGCTGCATTTGGCGCCGGGCAC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCGCAGCGACAAGGAGCTaGCGCCGCCGCCGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAAATRS*RRRRSH
Trigger: GTGAGAGCGGCGGCGGCGGCAGCTCCTTGTCGCTGC...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGCAGCGACAAGGAGCTaGCGCCGCCGCCGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWAATRS*RRRRSH
Trigger: GTGAGAGCGGCGGCGGCGGCAGCTCCTTGTCGCTGC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCGGCTGCTGCGGCGGGTaGAGCGACAAGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFGCCGG*SDKELP
Trigger: CGGCAGCTCCTTGTCGCTGCACCCGCCGCAGCAGCC...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGGCTGCTGCGGCGGGTaGAGCGACAAGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTGCCGG*SDKELP
Trigger: CGGCAGCTCCTTGTCGCTGCACCCGCCGCAGCAGCC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGGCTGCTGCGGCGGGTaGAGCGACAAGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWGCCGG*SDKELP
Trigger: CGGCAGCTCCTTGTCGCTGCACCCGCCGCAGCAGCC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGCGGGCACCCGTGGTCTaGAGCAGGGTCCGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTRAPVV*SRVRKA
Trigger: CGCCTTCCGGACCCTGCTGCAGACCACGGGTGCCCG...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATATGCTCGGGGCTCCGTaGGGACCCGCGGCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYMLGAP*GPAARV
Trigger: TACCCGGGCCGCGGGTCCCCACGGAGCCCCGAGCAT...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCGCGAGGTGGTGGTTGTaGTCGTCGGTGCCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAARWWL*SSVPGA
Trigger: GGCGCCGGGCACCGACGACCACAACCACCACCTCGC...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACATGGAGGCTGGGCCCGTaGGGGAGCACACATGGTCGC +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTWRLGP*GSTHGR
Trigger: GCGACCATGTGTGCTCCCCCACGGGCCCAGCCTCCA...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGTCCGGAACTGGAGGCTaGGCCCGTGGGGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLSGTGG*ARGGAH
Trigger: GTGTGCTCCCCCACGGGCCCAGCCTCCAGTTCCGGA...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACGCTGGCCTCGCGTCTaGGCCCAGCTCCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPRWPRV*AQLPGA
Trigger: GGCGCCTGGGAGCTGGGCTCAGACGCGAGGCCAGCG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATTGCCCAAGCTGGTCTTaGAATCCTGGGCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADCPSWS*NPGLKR
Trigger: TCTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCA...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCACTTCTGGGCTCGGGTaGTCCTCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCTSGLG*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACCCGAGCCCAGAAGT...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGGCCCGGGTAATTCATaGTGTGGAGACGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLGPGNS*CGDAAG
Trigger: GCCGGCGGCGTCTCCACAGCATGAATTACCCGGGCC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR GCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTCCGCCTCGGCCGTTATaGTCGGGGCTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSPPRPL*SGLRGD
Trigger: GTCCCCACGGAGCCCCGAGCATAACGGCCGAGGCGG...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCCCGCCTCGGCCGTTATaGTCGGGGCTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTPPRPL*SGLRGD
Trigger: GTCCCCACGGAGCCCCGAGCATAACGGCCGAGGCGG...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGGTTGTGGTCGTCGGTaGCCGGCGCCAAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSGCGRR*PAPNAA
Trigger: GGCTGCATTTGGCGCCGGGCACCGACGACCACAACC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGACCAGCGGAGGCTGCTaGGGCGGGTGCAGCGACAAG +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTTSGGC*GGCSDK
Trigger: CTTGTCGCTGCACCCGCCGCAGCAGCCTCCGCTGGT...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCACCAGCGGAGGCTGCTaGGGCGGGTGCAGCGACAAG +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGATSGGC*GGCSDK
Trigger: CTTGTCGCTGCACCCGCCGCAGCAGCCTCCGCTGGT...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACGGGACCAGCGGAGGCTaGTGCGGCGGGTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYGTSGG*CGGCSD
Trigger: GTCGCTGCACCCGCCGCAGCAGCCTCCGCTGGTCCC...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTGCCCCGTCGTACTCTaGCAGAAGCCGCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSCPVVL*QKPQAR
Trigger: CCGCGCCTGCGGCTTCTGCCAGAGTACGACGGGGCA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATTGCCCCGTCGTACTCTaGCAGAAGCCGCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHCPVVL*QKPQAR
Trigger: CCGCGCCTGCGGCTTCTGCCAGAGTACGACGGGGCA...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGCGAGGTGGTGGTTGTaGTCGTCGGTGCCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEARWWL*SSVPGA
Trigger: GGCGCCGGGCACCGACGACCACAACCACCACCTCGC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATCCAGCGCGAGGTGGTaGTTGTGGTCGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSSSARW*LWSSVP
Trigger: GGGCACCGACGACCACAACCACCACCTCGCGCTGGA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTGGGTCCAGCGCGAGGTaGTGGTTGTGGTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCGSSAR*WLWSSV
Trigger: CACCGACGACCACAACCACCACCTCGCGCTGGACCC...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGGGTCCAGCGCGAGGTaGTGGTTGTGGTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKGSSAR*WLWSSV
Trigger: CACCGACGACCACAACCACCACCTCGCGCTGGACCC...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATTGGAGGCTGGGCCCGTaGGGGAGCACACATGGTCGC +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHWRLGP*GSTHGR
Trigger: GCGACCATGTGTGCTCCCCCACGGGCCCAGCCTCCA...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTCCGGAACTGGAGGCTaGGCCCGTGGGGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFSGTGG*ARGGAH
Trigger: GTGTGCTCCCCCACGGGCCCAGCCTCCAGTTCCGGA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCGCTGGCCTCGCGTCTaGGCCCAGCTCCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSRWPRV*AQLPGA
Trigger: GGCGCCTGGGAGCTGGGCTCAGACGCGAGGCCAGCG...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAACATAGTTCTCGTCACTaGGGCAGGGGTCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKHSSRH*GRGPAR
Trigger: TCGCGCTGGACCCCTGCCTCAGTGACGAGAACTATG...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGACTTCTGGGCTCGGGTaGTCCTCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLTSGLG*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACCCGAGCCCAGAAGT...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGACTTCTGGGCTCGGGTaGTCCTCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKTSGLG*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACCCGAGCCCAGAAGT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTACCATCTCCGGCTCGTaGCCCGTCGTACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCTISGS*PVVLWQ
Trigger: CTGCCAGAGTACGACGGGGCACGAGCCGGAGATGGT...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR GCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGACCATCTCCGGCTCGTaGCCCGTCGTACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKTISGS*PVVLWQ
Trigger: CTGCCAGAGTACGACGGGGCACGAGCCGGAGATGGT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395606.5
ENST00000673822.2
CDS-3UTR GCA 90 bp TCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCACCTTGGTCCATTTTCTaGCCAATGCCATGCACAACA +
Preference number: 4 (lower is better)
Translates to: SRKPELLCGRVCVPTVVAPWSIF*PMPCTT
Trigger: TGTTGTGCATGGCATTGGGCAGAAAATGGACCAAGG...TGCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR GCA 90 bp GGTCTTGACTTCCAGTATTTCCTGGGCGGATGCCACGCAACGCCAAGAAAACTGTATTTCCTGGGCGGATaGCACGCAACGCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GLDFQYFLGGCHATPRKLYFLGG*HATPRK
Trigger: TTTTCTTGGCGTTGCGTGGCATCCGCCCAGGAAATA...CAGTTTTCTTGGCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGTCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGGCCCGGGTAATTCATaGTGTGGAGACGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWGPGNS*CGDAAG
Trigger: GCCGGCGGCGTCTCCACAGCATGAATTACCCGGGCC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395606.5
ENST00000673822.2
CDS-3UTR GCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCGGTTGTGGTCGTCGGTaGCCGGCGCCAAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFGCGRR*PAPNAA
Trigger: GGCTGCATTTGGCGCCGGGCACCGACGACCACAACC...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCACCAGCGGAGGCTGCTaGGGCGGGTGCAGCGACAAG +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTTSGGC*GGCSDK
Trigger: CTTGTCGCTGCACCCGCCGCAGCAGCCTCCGCTGGT...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGGGACCAGCGGAGGCTaGTGCGGCGGGTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRGTSGG*CGGCSD
Trigger: GTCGCTGCACCCGCCGCAGCAGCCTCCGCTGGTCCC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACCGGGCACCCGTGGTCTaGAGCAGGGTCCGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYRAPVV*SRVRKA
Trigger: CGCCTTCCGGACCCTGCTGCAGACCACGGGTGCCCG...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTGCCCCGTCGTACTCTaGCAGAAGCCGCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTCPVVL*QKPQAR
Trigger: CCGCGCCTGCGGCTTCTGCCAGAGTACGACGGGGCA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAACTTCCAGTATTTCCTaGGCGGATGCCACGCAACGC +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTETSSIS*ADATQR
Trigger: GCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGT...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGGGTCCAGCGCGAGGTaGTGGTTGTGGTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSGSSAR*WLWSSV
Trigger: CACCGACGACCACAACCACCACCTCGCGCTGGACCC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTCCGGAACTGGAGGCTaGGCCCGTGGGGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTSGTGG*ARGGAH
Trigger: GTGTGCTCCCCCACGGGCCCAGCCTCCAGTTCCGGA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAGAGATCCTCCCATCTTaGCCTCCCGAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEEILPS*PPEVLG
Trigger: TCCCAACACTTCGGGAGGCCAAGATGGGAGGATCTC...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCAGATGCTTTCAATCCGTaGAGCCGTTCTTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: SRKPELLCGRVCVPTVVADAFNP*SRSSIS
Trigger: GGAAATAGAAGAACGGCTTCACGGATTGAAAGCATC...TGCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp ATCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCCCACAAGGCCTTCTCTaGGTTCAAAATCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: IEEARTAMWKGLCPYGGSPQGLL*VQNQSC
Trigger: ACAGGATTGATTTTGAACTCAGAGAAGGCCTTGTGG...GCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp CGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGAAATTCTCAACCATGCGACGTGACAGCTaGCCAATAGCGGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RNAKKTANGDPIQKKFSTMRRDS*PIAALH
Trigger: GTGGAGAGCCGCTATTGGTCAGCTGTCACGTCGCAT...GGTTGAGAATTTCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGAGGCAGTATGCGACGTaGCAGCTGACCAATAGCGGC +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMRQYAT*QLTNSG
Trigger: GCCGCTATTGGTCAGCTGTCACGTCGCATACTGCCT...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCACATAGTTCTCGTCACTaGGGCAGGGGTCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSHSSRH*GRGPAR
Trigger: TCGCGCTGGACCCCTGCCTCAGTGACGAGAACTATG...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATTCCCCAACATATCCTaGCAACTGTTGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEFPNIS*QLLGGE
Trigger: CTCCCCACCCAACAGTTGTCAGGATATGTTGGGGAA...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GGCGGATGCCACGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGAACTTCATCCACACTGTaGCAGTCCACATGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: GGCHATPRKLLMGIPYRRTSSTL*QSTWFR
Trigger: TCGAAACCATGTGGACTGGCACAGTGTGGATGAAGT...TCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCGTGGCATCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAATCCCGACCCGAGCTaGGGCGGCAGCGGCGACCGC +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASNPDPS*GGSGDR
Trigger: GCGGTCGCCGCTGCCGCCGCAGCTCGGGTCGGGATT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357758.3
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGGCCCGGGTAATTCATaGTGTGGAGACGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTGPGNS*CGDAAG
Trigger: GCCGGCGGCGTCTCCACAGCATGAATTACCCGGGCC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR GCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGGTTGTGGTCGTCGGTaGCCGGCGCCAAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSGCGRR*PAPNAA
Trigger: GGCTGCATTTGGCGCCGGGCACCGACGACCACAACC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTGGAAGGCGAGCTCGATaGGGAGCGAGTCGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSGRRAR*GASRSR
Trigger: TCGGCTACGACTCGCTCCGCATCGAGCTCGCCTTCC...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGGAAGGCGAGCTCGATaGGGAGCGAGTCGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWGRRAR*GASRSR
Trigger: TCGGCTACGACTCGCTCCGCATCGAGCTCGCCTTCC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp ATCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCCTGTGCCAGTCCACATaGTTTCGACTCAACTTGAAA +
Preference number: 4 (lower is better)
Translates to: IEEARTAMWKGLCPYGGSLCQST*FRLNLK
Trigger: TTTCAAGTTGAGTCGAAACCATGTGGACTGGCACAG...GCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CCA 90 bp TCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCAGGTAGGTTCTTTAGCTaGGTTGAGAAAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SRKPELLCGRVCVPTVVAGRFFS*VEKAWL
Trigger: AAGCCAAGCTTTCTCAACCCAGCTAAAGAACCTACC...TGCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAATCCAGCGCGAGGTGGTaGTTGTGGTCGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALESSARW*LWSSVP
Trigger: GGGCACCGACGACCACAACCACCACCTCGCGCTGGA...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTCCAGCGCGAGGTGGTaGTTGTGGTCGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTSSARW*LWSSVP
Trigger: GGGCACCGACGACCACAACCACCACCTCGCGCTGGA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGAGGCAGTATGCGACGTaGCAGCTGACCAATAGCGGC +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLRQYAT*QLTNSG
Trigger: GCCGCTATTGGTCAGCTGTCACGTCGCATACTGCCT...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAAGGCAGTATGCGACGTaGCAGCTGACCAATAGCGGC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSRQYAT*QLTNSG
Trigger: GCCGCTATTGGTCAGCTGTCACGTCGCATACTGCCT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp TCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCAGGAGGAATCAGATTGTaGTTTGTAGCCTTTACATGC +
Preference number: 4 (lower is better)
Translates to: SRKPELLCGRVCVPTVVAGGIRL*FVAFTC
Trigger: GCATGTAAAGGCTACAAATCACAATCTGATTCCTCC...TGCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAGGTGAGAGATACAGCTaGCCAACTTTGCTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEGERYS*PTLLPV
Trigger: AACTGGGAGCAAAGTTGGTCAGCTGTATCTCTCACC...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATGTGGGAAATAAGGTCTaGCCTGAGTCATGTACTCAT +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADVGNKV*PESCTH
Trigger: ATGAGTACATGACTCAGGTCAGACCTTATTTCCCAC...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATCCCACCTTTGCATCCTaGGGTACTCAATATTTAGCT +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADPTFAS*GTQYLA
Trigger: AGCTAAATATTGAGTACCTCAGGATGCAAAGGTGGG...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAACCATCTCCGGCTCGTaGCCCGTCGTACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALETISGS*PVVLWQ
Trigger: CTGCCAGAGTACGACGGGGCACGAGCCGGAGATGGT...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR GCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATTTCACATCCAGGTCTTaGTTGATTCTCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADFTSRS*LILWRR
Trigger: CCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAA...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCCGCCTCGGCCGTTATaGTCGGGGCTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSPPRPL*SGLRGD
Trigger: GTCCCCACGGAGCCCCGAGCATAACGGCCGAGGCGG...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTTCCCCGCCGGGCAGGTaGTCGAAGCAGCAGACGCCG +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVISPPGR*SKQQTP
Trigger: CGGCGTCTGCTGCTTCGAGCACCTGCCCGGCGGGGA...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTGCAGCGACAAGGAGCTaGCGCCGCCGCCGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSAATRS*RRRRSH
Trigger: GTGAGAGCGGCGGCGGCGGCAGCTCCTTGTCGCTGC...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGCAGCGACAAGGAGCTaGCGCCGCCGCCGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIAATRS*RRRRSH
Trigger: GTGAGAGCGGCGGCGGCGGCAGCTCCTTGTCGCTGC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTCGGGCACCCGTGGTCTaGAGCAGGGTCCGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASRAPVV*SRVRKA
Trigger: CGCCTTCCGGACCCTGCTGCAGACCACGGGTGCCCG...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR GCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATTCAGGAGAGTTATGGTaGCAGCTGCTTCTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADSGELW*QLLLRN
Trigger: ATTTCTCAGAAGCAGCTGGCACCATAACTCTCCTGA...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATTCTGGAGGTGATACTTaGTTCAGTTCTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADSGGDT*FSSPGT
Trigger: AGTTCCTGGAGAACTGAAGCAAGTATCACCTCCAGA...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTGTGGGGGAGCACACATaGTCGCCGTCCCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSVGEHT*SPSRSP
Trigger: CGGGGACCGGGACGGCGACCATGTGTGCTCCCCCAC...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAAGCCTCTTGAGTAGCTaGGACTACAGGTGTACACCA +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTESLLSS*DYRCTP
Trigger: TGGTGTACACCTGTAGTCCCAGCTACTCAAGAGGCT...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAAAGACCTCAGAGCTATaGTCACTGACTGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEKTSEL*SLTEPW
Trigger: CCAGGGTTCAGTCAGTGACCATAGCTCTGAGGTCTT...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp GGAGCCTTGAGTGACAGATGGCATCATCAAAGGGCTTaGGTTGTCATCAGACCTATGTGTCCCTATCCCCTT +
Preference number: 4 (lower is better)
Translates to: GALSDRWHHQRA*VVIRPMCPYPL
Trigger: AAGGGGATAGGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp CCTCCTCACCCACAGTGTTCCAGTCTGCAGTGTCTGTaGTTCCCACCTTTGCATCCTGAGGTACTCAATATT +
Preference number: 4 (lower is better)
Translates to: PPHPQCSSLQCL*FPPLHPEVLNI
Trigger: AATATTGAGTACCTCAGGATGCAAAGGTGGGAACAACAGACACTGCAGACTGGAACACTGTGGGTGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp AGTGTCGGCGGGACAAAACTGGTGAGGTCACAGGGCTaGGTATGGTTGAAATGCCTTCATTCTCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: SVGGTKLVRSQG*VWLKCLHSLKL
Trigger: CAGTTTCAGAGAATGAAGGCATTTCAACCATACCAAGCCCTGTGACCTCACCAGTTTTGTCCCGCCGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATATGCGACGTGACAGCTaGCCAATAGCGGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHMRRDS*PIAALH
Trigger: GTGGAGAGCCGCTATTGGTCAGCTGTCACGTCGCAT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTATGCGACGTGACAGCTaGCCAATAGCGGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSMRRDS*PIAALH
Trigger: GTGGAGAGCCGCTATTGGTCAGCTGTCACGTCGCAT...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTATGCGACGTGACAGCTaGCCAATAGCGGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSMRRDS*PIAALH
Trigger: GTGGAGAGCCGCTATTGGTCAGCTGTCACGTCGCAT...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp CAAGAAGATGTCGTTCTTCATAGCTCATCCATCGTTCATCAGGCAACTCTTCTTAGGCAGTATGCGACGTaGCAGCTGACCAATAGCGGC +
Preference number: 4 (lower is better)
Translates to: QEDVVLHSSSIVHQATLLRQYAT*QLTNSG
Trigger: GCCGCTATTGGTCAGCTGTCACGTCGCATACTGCCT...AAGAAGAGTTGCCTGATGAACGATGGATGAGCTATGAAGAACGACATCTTCTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGCCGACTCGGCGGAGCTaGAGTCATAGTTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTPTRRS*SHSSRH
Trigger: GTGACGAGAACTATGACTTCAGCTCCGCCGAGTCGG...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCCCGACTCGGCGGAGCTaGAGTCATAGTTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFPTRRS*SHSSRH
Trigger: GTGACGAGAACTATGACTTCAGCTCCGCCGAGTCGG...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCCGACTCGGCGGAGCTaGAGTCATAGTTCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSPTRRS*SHSSRH
Trigger: GTGACGAGAACTATGACTTCAGCTCCGCCGAGTCGG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTGGTACAGACAGTGCTaGTTGAGCTGCTGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPWYRQC*LSCWCL
Trigger: TAAGCACCAGCAGCTCAATCAGCACTGTCTGTACCA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATGCTTTCCACAGTGACTaGACTAATTTACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADAFHSD*TNLHSH
Trigger: GTGGGAATGTAAATTAGTTCAGTCACTGTGGAAAGC...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCAACTCTTCTTCCTTTTaGAGCAACTGTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: IEEARTAMWKGLCPYGGSNSSSF*SNCSYS
Trigger: GCTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTT...GCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR GCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTACCAGCGGAGGCTGCTaGGGCGGGTGCAGCGACAAG +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSTSGGC*GGCSDK
Trigger: CTTGTCGCTGCACCCGCCGCAGCAGCCTCCGCTGGT...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCTCACCCAGGCTGGAGTaGATTGGTGTGATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCSPRLE*IGVIRA
Trigger: AGCTCTGATCACACCAATGCACTCCAGCCTGGGTGA...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTGGGACCACAGGCGTCTaGCAACACACCCAGCTAATC +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFGTTGV*QHTQLI
Trigger: GATTAGCTGGGTGTGTTGGCAGACGCCTGTGGTCCC...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAGCCGCAGCTGCGTTCTaGCGCCGGCCCCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRAAAAF*RRPHCH
Trigger: GTGACAATGGGGCCGGCGGCAGAACGCAGCTGCGGC...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673822.2
CDS-3UTR CCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGATGCCCCGTCGTACTCTaGCAGAAGCCGCAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRCPVVL*QKPQAR
Trigger: CCGCGCCTGCGGCTTCTGCCAGAGTACGACGGGGCA...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp ATCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCTCTTGCTTGATTCTCTaGAGAAGGTTTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: IEEARTAMWKGLCPYGGSSCLIL*RRFCQT
Trigger: AGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGA...GCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGATCCAGCGCGAGGTGGTaGTTGTGGTCGTCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRSSARW*LWSSVP
Trigger: GGGCACCGACGACCACAACCACCACCTCGCGCTGGA...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTTGGAGGCTGGGCCCGTaGGGGAGCACACATGGTCGC +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASWRLGP*GSTHGR
Trigger: GCGACCATGTGTGCTCCCCCACGGGCCCAGCCTCCA...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGAGATCCTCCCATCTTaGCCTCCCGAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLEILPS*PPEVLG
Trigger: TCCCAACACTTCGGGAGGCCAAGATGGGAGGATCTC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCTGTGTGCAACAGGGATaGCTACTGATCCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCCVQQG*LLIPSR
Trigger: CCTAGAGGGGATCAGTAGCCATCCCTGTTGCACACA...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATATGAGCTGCCACACCTaGCCAAAATCCAGTATATTT +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADMSCHT*PKSSIF
Trigger: AAATATACTGGATTTTGGCCAGGTGTGGCAGCTCAT...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGGACCGCAGTGGGTGTaGGTACAGTCAAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTGPQWV*VQSREG
Trigger: ACCTTCCCTTGACTGTACCCACACCCACTGCGGTCC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATAAGCAGGGACCGCAGTaGGTGTGGGTACAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHKQGPQ*VWVQSR
Trigger: CCTTGACTGTACCCACACCCACTGCGGTCCCTGCTT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTAGGTTGGGCAGGCTGTaGGGAGCCTTGAGTGACAGA +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSRLGRL*GALSDR
Trigger: TCTGTCACTCAAGGCTCCCCACAGCCTGCCCAACCT...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAGGTGGAGTTTTGCCATaGATGGCTCCATCCTCATAT +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEGGVLP*MAPSSY
Trigger: ATATGAGGATGGAGCCATCCATGGCAAAACTCCACC...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp TGGCTCCATCCTCATATCACCCCATGTGCCACTGGATaGTGTTTAACAGCCATAGAAGGCTACCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: WLHPHITPCATG*CLTAIEGYLHF
Trigger: GAAATGCAGGTAGCCTTCTATGGCTGTTAAACACAATCCAGTGGCACATGGGGTGATATGAGGATGGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp ATGCACATAATCCATGTCACAGGAAAGGGTGGAGTTTaGCCATGGATGGCTCCATCCTCATATCACCCCATG +
Preference number: 4 (lower is better)
Translates to: MHIIHVTGKGGV*PWMAPSSYHPM
Trigger: CATGGGGTGATATGAGGATGGAGCCATCCATGGCAAAACTCCACCCTTTCCTGTGACATGGATTATGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATTGTTTGTGTCATAGATaGTGCTTTCAATCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADCLCHR*CFQSVK
Trigger: CTTCACGGATTGAAAGCATCATCTATGACACAAACA...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGCGGATGCCACGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGATCAAAATCAATCCTGTaGTCCAACTCCAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: GGCHATPRKLLMGIPYRRSKSIL*SNSNAE
Trigger: TTCTGCATTGGAGTTGGATCACAGGATTGATTTTGA...TCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCGTGGCATCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTATGCGACGTGACAGCTaGCCAATAGCGGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSMRRDS*PIAALH
Trigger: GTGGAGAGCCGCTATTGGTCAGCTGTCACGTCGCAT...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAAGGCAGTATGCGACGTaGCAGCTGACCAATAGCGGC +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALERQYAT*QLTNSG
Trigger: GCCGCTATTGGTCAGCTGTCACGTCGCATACTGCCT...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGCGAGTCGTAGCCGATaGAGGGCTTCCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYASRSR*RASRSS
Trigger: AGAAGACCTGGAAGCCCTTCATCGGCTACGACTCGC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395606.5
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGCGAGTCGTAGCCGATaGAGGGCTTCCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSASRSR*RASRSS
Trigger: AGAAGACCTGGAAGCCCTTCATCGGCTACGACTCGC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATTGGGATTACAGGCGTaGACCACGGTGACTAGCTCA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSLGLQA*TTVTSS
Trigger: TGAGCTAGTCACCGTGGTTCACGCCTGTAATCCCAA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGTGCCCAAGCTGGTCTTaGAATCCTGGGCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLCPSWS*NPGLKR
Trigger: TCTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCA...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAAACAGGGATGGCTACTaGTCCCCTCTAGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSNRDGY*SPLGNS
Trigger: GGAGTTACCTAGAGGGGATCAGTAGCCATCCCTGTT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAGGTGAGAGATACAGCTaGCCAACTTTGCTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKGERYS*PTLLPV
Trigger: AACTGGGAGCAAAGTTGGTCAGCTGTATCTCTCACC...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAACGTGAGTATTCAGCATaGAGCATGTTCAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEREYSA*SMFSVS
Trigger: ACTCACACTGAACATGCTTCATGCTGAATACTCACG...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCCTGGCAGAGGCTTaGGGCACAGGAATGACAGCG +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTFLAEA*GTGMTA
Trigger: CGCTGTCATTCCTGTGCCTCAAGCCTCTGCCAGGAA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATATCACAAGCATCTACTaGAGACTGAAAGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADITSIY*RLKEKA
Trigger: TGCTTTCTCTTTCAGTCTTCAGTAGATGCTTGTGAT...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTTTCCCCAACATATCCTaGCAACTGTTGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCFPNIS*QLLGGE
Trigger: CTCCCCACCCAACAGTTGTCAGGATATGTTGGGGAA...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACACAGAGCTATGGTCACTaGCTGAACCCTGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTQSYGH*LNPGLR
Trigger: TCTCAGTCCAGGGTTCAGTCAGTGACCATAGCTCTG...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGACAGACAGTGCTGATTaGGCTGCTGGTGCTTACAGG +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKTDSAD*AAGAYR
Trigger: CCTGTAAGCACCAGCAGCTCAATCAGCACTGTCTGT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGATCTTCAGCAAAGCTaGTACAAGCAAGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPDLQQS*YKQAMG
Trigger: CCCCATTGCTTGCTTGTATCAGCTTTGCTGAAGATC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAACCAAAGAAAGAGCCTaGATAGCCAAAGCAACCCAA +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTETKERA*IAKATQ
Trigger: TTGGGTTGCTTTGGCTATTCAGGCTCTTTCTTTGGT...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAACCATCTCCGGCTCGTaGCCCGTCGTACTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPTISGS*PVVLWQ
Trigger: CTGCCAGAGTACGACGGGGCACGAGCCGGAGATGGT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395606.5
ENST00000673822.2
CDS-3UTR GCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATCCATTTTCTGCCCAATaGCATGCACAACAAATACAA +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADPFSAQ*HAQQIQ
Trigger: TTGTATTTGTTGTGCATGGCATTGGGCAGAAAATGG...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAATATTTCCTGGGCGGATaGCACGCAACGCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKYFLGG*HATPRK
Trigger: TTTTCTTGGCGTTGCGTGGCATCCGCCCAGGAAATA...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGCGAGGAAGCCAGAACTaGTATGTGGAAGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLRGSQN*YVEGSV
Trigger: CACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCG...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTGGTTGTGGTCGTCGGTaGCCGGCGCCAAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSGCGRR*PAPNAA
Trigger: GGCTGCATTTGGCGCCGGGCACCGACGACCACAACC...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAAATCCTGACTTACTGTaGCTTGTGTCTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTENPDLL*LVSQWH
Trigger: GTGCCATTGAGACACAAGGCACAGTAAGTCAGGATT...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTCACCCAGGCTGGAGTaGATTGGTGTGATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYSPRLE*IGVIRA
Trigger: AGCTCTGATCACACCAATGCACTCCAGCCTGGGTGA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATCTGGAGGTGATACTTaGTTCAGTTCTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTESGGDT*FSSPGT
Trigger: AGTTCCTGGAGAACTGAAGCAAGTATCACCTCCAGA...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATAACCTCTATGAAGTCTaGTACCACTACTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADNLYEV*YHYLML
Trigger: AAGCATCAAGTAGTGGTACCAGACTTCATAGAGGTT...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTACTTCCAGTATTTCCTaGGCGGATGCCACGCAACGC +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSTSSIS*ADATQR
Trigger: GCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGT...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCACTTCCAGTATTTCCTaGGCGGATGCCACGCAACGC +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFTSSIS*ADATQR
Trigger: GCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTACTTCCAGTATTTCCTaGGCGGATGCCACGCAACGC +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFTSSIS*ADATQR
Trigger: GCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGCCAGAACTGCTATGTaGAAGGGTCTGTGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSARTAM*KGLCPY
Trigger: GTAGGGACACAGACCCTTCCACATAGCAGTTCTGGC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATGTGTGCAACAGGGATaGCTACTGATCCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSCVQQG*LLIPSR
Trigger: CCTAGAGGGGATCAGTAGCCATCCCTGTTGCACACA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCACAGAGGTGTATGTGTaGAGGGGAGGTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGATEVYV*RGGWGT
Trigger: TGTCCCCCAACCTCCCCTCCACACATACACCTCTGT...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGGACCGCAGTGGGTGTaGGTACAGTCAAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSGPQWV*VQSREG
Trigger: ACCTTCCCTTGACTGTACCCACACCCACTGCGGTCC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAGTCTCAGGAGAGTTATaGTGCCAGCTGCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKVSGEL*CQLLLR
Trigger: TCTCAGAAGCAGCTGGCACCATAACTCTCCTGAGAC...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGCCTTGAGTGACAGATaGCATCATCAAAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKALSDR*HHQRAL
Trigger: CAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATAGGTTGGGCAGGCTGTaGGGAGCCTTGAGTGACAGA +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYRLGRL*GALSDR
Trigger: TCTGTCACTCAAGGCTCCCCACAGCCTGCCCAACCT...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGGTGGAGTTTTGCCATaGATGGCTCCATCCTCATAT +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKGGVLP*MAPSSY
Trigger: ATATGAGGATGGAGCCATCCATGGCAAAACTCCACC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCATCAAGAGTAAGTTTTaGCCGCCACTCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCIKSKF*PPLNRQ
Trigger: CTGCCTGTTGAGTGGCGGTCAAAACTTACTCTTGAT...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGTGGATCTGGACAGGTaGAATGTTGCTGTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPVDLDR*NVAVVF
Trigger: AAACACTACAGCAACATTTCACCTGTCCAGATCCAC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACATGCGACGTGACAGCTaGCCAATAGCGGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYMRRDS*PIAALH
Trigger: GTGGAGAGCCGCTATTGGTCAGCTGTCACGTCGCAT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTGGCAACATCCAAGGATaGCCAATAGGCAGTATGCGA +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCGNIQG*PIGSMR
Trigger: TCGCATACTGCCTATTGGTCATCCTTGGATGTTGCC...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGGCAACATCCAAGGATaGCCAATAGGCAGTATGCGA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSGNIQG*PIGSMR
Trigger: TCGCATACTGCCTATTGGTCATCCTTGGATGTTGCC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGACATAGTTCTCGTCACTaGGGCAGGGGTCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRHSSRH*GRGPAR
Trigger: TCGCGCTGGACCCCTGCCTCAGTGACGAGAACTATG...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTTGGGATTACAGGCGTaGACCACGGTGACTAGCTCA +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFLGLQA*TTVTSS
Trigger: TGAGCTAGTCACCGTGGTTCACGCCTGTAATCCCAA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTGGGATTACAGGCGTaGACCACGGTGACTAGCTCA +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFLGLQA*TTVTSS
Trigger: TGAGCTAGTCACCGTGGTTCACGCCTGTAATCCCAA...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTAACAGGGATGGCTACTaGTCCCCTCTAGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSNRDGY*SPLGNS
Trigger: GGAGTTACCTAGAGGGGATCAGTAGCCATCCCTGTT...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTCTTTTGGCTTGATCTaGCTCCACTGGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSSFGLI*LHWKGL
Trigger: GAGCCCCTTCCAGTGGAGTCAGATCAAGCCAAAAGA...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGTGTGGCAGCCACAGCTaGTGCATAGGGAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTCGSHS*CIGRSF
Trigger: GAAAGATCTCCCTATGCATCAGCTGTGGCTGCCACA...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGTGTGGCAGCCACAGCTaGTGCATAGGGAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWCGSHS*CIGRSF
Trigger: GAAAGATCTCCCTATGCATCAGCTGTGGCTGCCACA...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGTGGTACAGACAGTGCTaGTTGAGCTGCTGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKWYRQC*LSCWCL
Trigger: TAAGCACCAGCAGCTCAATCAGCACTGTCTGTACCA...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGCATGTACTCATCTCTTaGCCATGGTACAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMHVLIS*PWYRQC
Trigger: GCACTGTCTGTACCATGGTCAAGAGATGAGTACATG...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGTGGGAAATAAGGTCTaGCCTGAGTCATGTACTCAT +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPVGNKV*PESCTH
Trigger: ATGAGTACATGACTCAGGTCAGACCTTATTTCCCAC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGTGGGAAATAAGGTCTaGCCTGAGTCATGTACTCAT +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKVGNKV*PESCTH
Trigger: ATGAGTACATGACTCAGGTCAGACCTTATTTCCCAC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAACCCACCTTTGCATCCTaGGGTACTCAATATTTAGCT +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKPTFAS*GTQYLA
Trigger: AGCTAAATATTGAGTACCTCAGGATGCAAAGGTGGG...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAATCAAAATCAATCCTGTaGTCCAACTCCACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKSKSIL*SNSTRA
Trigger: TGCCCTCGTGGAGTTGGATCACAGGATTGATTTTGA...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATATTTCCTGGGCGGATaGCACGCAACGCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSYFLGG*HATPRK
Trigger: TTTTCTTGGCGTTGCGTGGCATCCGCCCAGGAAATA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCCGAGGAAGCCAGAACTaGTATGTGGAAGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGARGSQN*YVEGSV
Trigger: CACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCG...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATCGAGGAAGCCAGAACTaGTATGTGGAAGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHRGSQN*YVEGSV
Trigger: CACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCG...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp ATGGTTGAAATGCCTTCATTCTCTGAAACTGAGGTAGGTTCTTTAGCTGGGTTGCGAGGAAGCCAGAACTaGTATGTGGAAGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: MVEMPSFSETEVGSLAGLRGSQN*YVEGSV
Trigger: CACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCG...CAACCCAGCTAAAGAACCTACCTCAGTTTCAGAGAATGAAGGCATTTCAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR GCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAATTCACATCCAGGTCTTaGTTGATTCTCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKFTSRS*LILWRR
Trigger: CCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAA...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATTTTGTAGCCTTTACATaGAGTTTACCCAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADFVAFT*SLPKPS
Trigger: AGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAA...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTCACCCAGGCTGGAGTaGATTGGTGTGATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSSPRLE*IGVIRA
Trigger: AGCTCTGATCACACCAATGCACTCCAGCCTGGGTGA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGAAAGGGTGGAGTTTTaGCATGGATGGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTERVEF*HGWLHP
Trigger: AGGATGGAGCCATCCATGGCAAAACTCCACCCTTTC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGAAAGGGTGGAGTTTTaGCATGGATGGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSERVEF*HGWLHP
Trigger: AGGATGGAGCCATCCATGGCAAAACTCCACCCTTTC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTTCAACCTATCCTTCTaGCCTCCTCACCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYFNLSF*PPHPQC
Trigger: ACACTGTGGGTGAGGAGGGCAGAAGGATAGGTTGAA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATACAACAAATACAATATaGGTAGTCTGTGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: ELWPLAFLVERNVAATADTTNTI*VVCDGL
Trigger: CAAGCCATCACAGACTACCCATATTGTATTTGTTGT...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTGCCAGAACTGCTATGTaGAAGGGTCTGTGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSARTAM*KGLCPY
Trigger: GTAGGGACACAGACCCTTCCACATAGCAGTTCTGGC...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCGCCAGAACTGCTATGTaGAAGGGTCTGTGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFARTAM*KGLCPY
Trigger: GTAGGGACACAGACCCTTCCACATAGCAGTTCTGGC...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATTGTGTGCAACAGGGATaGCTACTGATCCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHCVQQG*LLIPSR
Trigger: CCTAGAGGGGATCAGTAGCCATCCCTGTTGCACACA...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCACTGACAACTGTTGGGTaGGGAGGAAGCAAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSLTTVG*GGSKLY
Trigger: GTACAACTTGCTTCCTCCCCACCCAACAGTTGTCAG...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATCTTACTGGCAAAGTTaGGATTATGGCAGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTESYWQS*DYGSLR
Trigger: TCTAAGGCTGCCATAATCCCAACTTTGCCAGTAAGA...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATAAGACCTCAGAGCTATaGTCACTGACTGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYKTSEL*SLTEPW
Trigger: CCAGGGTTCAGTCAGTGACCATAGCTCTGAGGTCTT...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGTGTCACAGGAAAGGGTaGAGTTTTGCCATGGATGGC +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLCHRKG*SFAMDG
Trigger: GCCATCCATGGCAAAACTCCACCCTTTCCTGTGACA...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGTGTCACAGGAAAGGGTaGAGTTTTGCCATGGATGGC +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKCHRKG*SFAMDG
Trigger: GCCATCCATGGCAAAACTCCACCCTTTCCTGTGACA...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp CCCTTCCAATGCCTCAGAATCCTGACTTACTGTGCCTaGTGTCTCAATGGCACATTGAGAAACAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: PFQCLRILTYCA*CLNGTLRNNVH
Trigger: GTGCACATTGTTTCTCAATGTGCCATTGAGACACAAGGCACAGTAAGTCAGGATTCTGAGGCATTGGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp GCTCATCCATCGTTCATCAGGCAACTCTTCTTCCTTTaGCAGCAACTGTTCATACAGCCGAACTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: AHPSFIRQLFFL*QQLFIQPNWIP
Trigger: TGGAATCCAGTTCGGCTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTTGCCTGATGAACGATGGATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATCAAGAGTAAGTTTTaGCCGCCACTCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLIKSKF*PPLNRQ
Trigger: CTGCCTGTTGAGTGGCGGTCAAAACTTACTCTTGAT...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATATCAAGAGTAAGTTTTaGCCGCCACTCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYIKSKF*PPLNRQ
Trigger: CTGCCTGTTGAGTGGCGGTCAAAACTTACTCTTGAT...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGCGATTCAGCTCTTGCTaGAGGCCTTTAACTAGTTCA +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMRFSSC*RPLTSS
Trigger: TGAACTAGTTAAAGGCCTTCAGCAAGAGCTGAATCG...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGGCAACATCCAAGGATaGCCAATAGGCAGTATGCGA +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTGNIQG*PIGSMR
Trigger: TCGCATACTGCCTATTGGTCATCCTTGGATGTTGCC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTGGCAACATCCAAGGATaGCCAATAGGCAGTATGCGA +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFGNIQG*PIGSMR
Trigger: TCGCATACTGCCTATTGGTCATCCTTGGATGTTGCC...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTGGCAACATCCAAGGATaGCCAATAGGCAGTATGCGA +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSGNIQG*PIGSMR
Trigger: TCGCATACTGCCTATTGGTCATCCTTGGATGTTGCC...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTCATAGTTCTCGTCACTaGGGCAGGGGTCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVIHSSRH*GRGPAR
Trigger: TCGCGCTGGACCCCTGCCTCAGTGACGAGAACTATG...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGAATGCCTCAGAATCCTaGCTTACTGTGCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLNASES*LTVPCV
Trigger: GACACAAGGCACAGTAAGTCAGGATTCTGAGGCATT...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAAATGCCTCAGAATCCTaGCTTACTGTGCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSNASES*LTVPCV
Trigger: GACACAAGGCACAGTAAGTCAGGATTCTGAGGCATT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCGGTGAGAGATACAGCTaGCCAACTTTGCTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFGERYS*PTLLPV
Trigger: AACTGGGAGCAAAGTTGGTCAGCTGTATCTCTCACC...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGCTGAGGCCTTTAGCGTaGGTATTCAGCATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLLRPLA*VFSMKH
Trigger: ATGCTTCATGCTGAATACTCACGCTAAAGGCCTCAG...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGATAGGGTACTCTTATaGGAGTCTGGAAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKDRVLL*ESGRKK
Trigger: CTTCTTTCTTCCAGACTCTCATAAGAGTACCCTATC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAAGTCAAGGGAAGGTATaGGTGACGCTCCTAGATATT +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKSQGKV*VTLLDI
Trigger: AATATCTAGGAGCGTCACTCATACCTTCCCTTGACT...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTGCACCAGTTCCAGCTaGGAAAATCAGAACTGGACA +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYCTSSS*ENQNWT
Trigger: TGTCCAGTTCTGATTTTCTCAGCTGGAACTGGTGCA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCCAGAGCTATGGTCACTaGCTGAACCCTGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTQSYGH*LNPGLR
Trigger: TCTCAGTCCAGGGTTCAGTCAGTGACCATAGCTCTG...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTCAGAGCTATGGTCACTaGCTGAACCCTGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSQSYGH*LNPGLR
Trigger: TCTCAGTCCAGGGTTCAGTCAGTGACCATAGCTCTG...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATCAACTGATCTGGAGGTaGTACTTGCTTCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYQLIWR*YLLQFS
Trigger: GGAGAACTGAAGCAAGTATCACCTCCAGATCAGTTG...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGATCTTCAGCAAAGCTaGTACAAGCAAGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTDLQQS*YKQAMG
Trigger: CCCCATTGCTTGCTTGTATCAGCTTTGCTGAAGATC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAAACGATTCTTGAAGTCTaGAATATGCAGAATCGAGGA +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTETILEV*NMQNRG
Trigger: TCCTCGATTCTGCATATTTCAGACTTCAAGAATCGT...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTCAAAATCAATCCTGTaGTCCAACTCCACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYSKSIL*SNSTRA
Trigger: TGCCCTCGTGGAGTTGGATCACAGGATTGATTTTGA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTTCCTCTTCTAGAGGCTaGCAAGTGCCGTCAATAAAC +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCSSSRG*QVPSIN
Trigger: GTTTATTGACGGCACTTGGCAGCCTCTAGAAGAGGA...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAACTTCATCCACACTGTaGCAGTCCACATGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSTSSTL*QSTWFR
Trigger: TCGAAACCATGTGGACTGGCACAGTGTGGATGAAGT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGACTTCATCCACACTGTaGCAGTCCACATGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKTSSTL*QSTWFR
Trigger: TCGAAACCATGTGGACTGGCACAGTGTGGATGAAGT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCCTTGGTCCATTTTCTaGCCAATGCCATGCACAACA +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCPWSIF*PMPCTT
Trigger: TGTTGTGCATGGCATTGGGCAGAAAATGGACCAAGG...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTATTTCCTGGGCGGATaGCACGCAACGCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFYFLGG*HATPRK
Trigger: TTTTCTTGGCGTTGCGTGGCATCCGCCCAGGAAATA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp GGCGGATGCCACGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGATTTGCATCATCATCGTaGTCATGTTTATACATGAAG +
Preference number: 4 (lower is better)
Translates to: GGCHATPRKLLMGIPYRRFASSS*SCLYMK
Trigger: CTTCATGTATAAACATGAGCACGATGATGATGCAAA...TCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCGTGGCATCCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR GCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTTCACCCAGGCTGGAGTaGATTGGTGTGATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSSPRLE*IGVIRA
Trigger: AGCTCTGATCACACCAATGCACTCCAGCCTGGGTGA...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAGGGACCACAGGCGTCTaGCAACACACCCAGCTAATC +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPGTTGV*QHTQLI
Trigger: GATTAGCTGGGTGTGTTGGCAGACGCCTGTGGTCCC...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGGGACCACAGGCGTCTaGCAACACACCCAGCTAATC +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRGTTGV*QHTQLI
Trigger: GATTAGCTGGGTGTGTTGGCAGACGCCTGTGGTCCC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGTCAGGAGAGTTATGGTaGCAGCTGCTTCTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMSGELW*QLLLRN
Trigger: ATTTCTCAGAAGCAGCTGGCACCATAACTCTCCTGA...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGACCACCTCACGGAATTaGACTGAAATTCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMTTSRN*TEIPRL
Trigger: CAGTCTAGGAATTTCAGTGCAATTCCGTGAGGTGGT...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTCATATCACCCCATGTaGCACTGGATTGTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPSYHPM*HWIVFN
Trigger: GTTAAACACAATCCAGTGGCACATGGGGTGATATGA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGAAAGGGTGGAGTTTTaGCATGGATGGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWERVEF*HGWLHP
Trigger: AGGATGGAGCCATCCATGGCAAAACTCCACCCTTTC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGTTCAACCTATCCTTCTaGCCTCCTCACCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTFNLSF*PPHPQC
Trigger: ACACTGTGGGTGAGGAGGGCAGAAGGATAGGTTGAA...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTTCAACCTATCCTTCTaGCCTCCTCACCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFFNLSF*PPHPQC
Trigger: ACACTGTGGGTGAGGAGGGCAGAAGGATAGGTTGAA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTTCATACAGCCGAACTaGATTCCAGCCAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPFIQPN*IPASHY
Trigger: ATAATGACTGGCTGGAATCCAGTTCGGCTGTATGAA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACACTTCCAGTATTTCCTaGGCGGATGCCACGCAACGC +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYTSSIS*ADATQR
Trigger: GCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGCCAGAACTGCTATGTaGAAGGGTCTGTGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSARTAM*KGLCPY
Trigger: GTAGGGACACAGACCCTTCCACATAGCAGTTCTGGC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGCCAGAACTGCTATGTaGAAGGGTCTGTGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYARTAM*KGLCPY
Trigger: GTAGGGACACAGACCCTTCCACATAGCAGTTCTGGC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCAGCCTCTTGAGTAGCTaGGACTACAGGTGTACACCA +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFSLLSS*DYRCTP
Trigger: TGGTGTACACCTGTAGTCCCAGCTACTCAAGAGGCT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGAGCCTCTTGAGTAGCTaGGACTACAGGTGTACACCA +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWSLLSS*DYRCTP
Trigger: TGGTGTACACCTGTAGTCCCAGCTACTCAAGAGGCT...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAATGTGTGCAACAGGGATaGCTACTGATCCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALECVQQG*LLIPSR
Trigger: CCTAGAGGGGATCAGTAGCCATCCCTGTTGCACACA...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATACAGGAAAATCTTTTaGCTTGATCTGACTCCACTG +
Preference number: 4 (lower is better)
Translates to: SSDVLEGVVATSLPSRTEYRKIF*LDLTPL
Trigger: CAGTGGAGTCAGATCAAGCCAAAAGATTTTCCTGTA...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGTACCATCAGATTCCTaGCAGAGGCTTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSVPSDS*QRLEAQ
Trigger: CTGTGCCTCAAGCCTCTGCCAGGAATCTGATGGTAC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGTACCATCAGATTCCTaGCAGAGGCTTGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEVPSDS*QRLEAQ
Trigger: CTGTGCCTCAAGCCTCTGCCAGGAATCTGATGGTAC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGTCTCAGGAGAGTTATaGTGCCAGCTGCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSVSGEL*CQLLLR
Trigger: TCTCAGAAGCAGCTGGCACCATAACTCTCCTGAGAC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCGTCTCAGGAGAGTTATaGTGCCAGCTGCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFVSGEL*CQLLLR
Trigger: TCTCAGAAGCAGCTGGCACCATAACTCTCCTGAGAC...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTAAGACCTCAGAGCTATaGTCACTGACTGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSKTSEL*SLTEPW
Trigger: CCAGGGTTCAGTCAGTGACCATAGCTCTGAGGTCTT...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGCCTTGAGTGACAGATaGCATCATCAAAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLALSDR*HHQRAL
Trigger: CAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTTTGTGGCTTATGGGGTaGGAAATAAGGTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCLWLMG*EIRSDL
Trigger: CAGGTCAGACCTTATTTCCCACCCCATAAGCCACAA...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGCACCCCATGTGCCACTaGATTGTGTTTAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLHPMCH*IVFNSH
Trigger: ATGGCTGTTAAACACAATCCAGTGGCACATGGGGTG...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp CCTAGTCTGAGGTTGCTCACTGTAGGGCACAACTACTaGTTTCGGGTGAGCAAGATAACAAACGGATCAATT +
Preference number: 4 (lower is better)
Translates to: PSLRLLTVGHNY*FRVSKITNGSI
Trigger: AATTGATCCGTTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTCAGACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGAAATTCTCAACCTATATCTTCTCCATTTaGACAGAGAAGGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RNAKKTANGDPIQKKFSTYIFSI*TEKGGR
Trigger: TCTCCCTCCCTTCTCTGTTCAAATGGAGAAGATATA...GGTTGAGAATTTCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGTCTGGTACCACTACTTaGTGCTTTAGAAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMSGTTT*CFRKSQ
Trigger: CTGGGATTTTCTAAAGCATCAAGTAGTGGTACCAGA...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTATCAAGAGTAAGTTTTaGCCGCCACTCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSIKSKF*PPLNRQ
Trigger: CTGCCTGTTGAGTGGCGGTCAAAACTTACTCTTGAT...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp CAAGAAGATGTCGTTCTTCATAGCTCATCCATCGTTCATCAGGCAACTCTTCTTATCAAGAGTAAGTTTTaGCCGCCACTCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: QEDVVLHSSSIVHQATLLIKSKF*PPLNRQ
Trigger: CTGCCTGTTGAGTGGCGGTCAAAACTTACTCTTGAT...AAGAAGAGTTGCCTGATGAACGATGGATGAGCTATGAAGAACGACATCTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGATGCTTTCAATCCGTaGAGCCGTTCTTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSDAFNP*SRSSIS
Trigger: GGAAATAGAAGAACGGCTTCACGGATTGAAAGCATC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGATGCTTTCAATCCGTaGAGCCGTTCTTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTDAFNP*SRSSIS
Trigger: GGAAATAGAAGAACGGCTTCACGGATTGAAAGCATC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAATGTTTGTGTCATAGATaGTGCTTTCAATCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKCLCHR*CFQSVK
Trigger: CTTCACGGATTGAAAGCATCATCTATGACACAAACA...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGGCAAAATATGGTCTTaGCTTCCAGTATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLGKIWS*LPVFPG
Trigger: CCCAGGAAATACTGGAAGTCAAGACCATATTTTGCC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTGTGGATCTGGACAGGTaGAATGTTGCTGTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCVDLDR*NVAVVF
Trigger: AAACACTACAGCAACATTTCACCTGTCCAGATCCAC...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGTGGATCTGGACAGGTaGAATGTTGCTGTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSVDLDR*NVAVVF
Trigger: AAACACTACAGCAACATTTCACCTGTCCAGATCCAC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAGGCAGTATGCGACGTaGCAGCTGACCAATAGCGGC +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASRQYAT*QLTNSG
Trigger: GCCGCTATTGGTCAGCTGTCACGTCGCATACTGCCT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTGCGAGTCGTAGCCGATaGAGGGCTTCCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASASRSR*RASRSS
Trigger: AGAAGACCTGGAAGCCCTTCATCGGCTACGACTCGC...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTAATGCCTCAGAATCCTaGCTTACTGTGCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFNASES*LTVPCV
Trigger: GACACAAGGCACAGTAAGTCAGGATTCTGAGGCATT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGGAAACAATTACAGCTaGAGAAAACCCTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCGNNYS*RKPFQC
Trigger: GCATTGGAAGGGTTTTCTTCAGCTGTAATTGTTTCC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGTGCACTCTTAAACTTTaGGCCCCTCAGATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKCTLKL*APQMKS
Trigger: GCTTTTCATCTGAGGGGCTCAAAGTTTAAGAGTGCA...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCCTAAAAGGTCACATGTaGATCAAGTCATTGAACAGC +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPLKGHM*IKSLNS
Trigger: GCTGTTCAATGACTTGATTCACATGTGACCTTTTAG...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCACGTGAGTATTCAGCATaGAGCATGTTCAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSREYSA*SMFSVS
Trigger: ACTCACACTGAACATGCTTCATGCTGAATACTCACG...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGCTGTGATACGGTACTaGCAATTTCTTTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPAVIRY*QFLFLL
Trigger: CAAAAGGAAAAGAAATTGTCAGTACCGTATCACAGC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGCTGTGATACGGTACTaGCAATTTCTTTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKAVIRY*QFLFLL
Trigger: CAAAAGGAAAAGAAATTGTCAGTACCGTATCACAGC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTCTTTTGGCTTGATCTaGCTCCACTGGAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYSFGLI*LHWKGL
Trigger: GAGCCCCTTCCAGTGGAGTCAGATCAAGCCAAAAGA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTCTTGAGGCACAGGAATaGCAGCGGAATACAGATAAG +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFLEAQE*QRNTDK
Trigger: CTTATCTGTATTCCGCTGTCATTCCTGTGCCTCAAG...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCTTGAGGCACAGGAATaGCAGCGGAATACAGATAAG +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSLEAQE*QRNTDK
Trigger: CTTATCTGTATTCCGCTGTCATTCCTGTGCCTCAAG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTTTCCTGGCAGAGGCTTaGGGCACAGGAATGACAGCG +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASFLAEA*GTGMTA
Trigger: CGCTGTCATTCCTGTGCCTCAAGCCTCTGCCAGGAA...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTGCACCAGTTCCAGCTaGGAAAATCAGAACTGGACA +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFCTSSS*ENQNWT
Trigger: TGTCCAGTTCTGATTTTCTCAGCTGGAACTGGTGCA...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTGTGGCAGCCACAGCTaGTGCATAGGGAGATCTTTC +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYCGSHS*CIGRSF
Trigger: GAAAGATCTCCCTATGCATCAGCTGTGGCTGCCACA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGTGTACTTTATCCTCTaGTGTTCTAGAGGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCVYFIL*CSRGSC
Trigger: ACAACTCCCTCTAGAACATCAGAGGATAAAGTACAC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGCTGTCAGACTGTCATaGCCATGCACCAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSAVRLS*PCTNLF
Trigger: AAAGAGATTGGTGCATGGTCATGACAGTCTGACAGC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACACAGACAGTGCTGATTaGGCTGCTGGTGCTTACAGG +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYTDSAD*AAGAYR
Trigger: CCTGTAAGCACCAGCAGCTCAATCAGCACTGTCTGT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTTGGTACAGACAGTGCTaGTTGAGCTGCTGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSWYRQC*LSCWCL
Trigger: TAAGCACCAGCAGCTCAATCAGCACTGTCTGTACCA...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGCATGTACTCATCTCTTaGCCATGGTACAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWHVLIS*PWYRQC
Trigger: GCACTGTCTGTACCATGGTCAAGAGATGAGTACATG...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCCATGTACTCATCTCTTaGCCATGGTACAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFHVLIS*PWYRQC
Trigger: GCACTGTCTGTACCATGGTCAAGAGATGAGTACATG...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGCAACTGATCTGGAGGTaGTACTTGCTTCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTQLIWR*YLLQFS
Trigger: GGAGAACTGAAGCAAGTATCACCTCCAGATCAGTTG...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCCAACTGATCTGGAGGTaGTACTTGCTTCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFQLIWR*YLLQFS
Trigger: GGAGAACTGAAGCAAGTATCACCTCCAGATCAGTTG...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAACCAAAGAAAGAGCCTaGATAGCCAAAGCAACCCAA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSTKERA*IAKATQ
Trigger: TTGGGTTGCTTTGGCTATTCAGGCTCTTTCTTTGGT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGCTTTCCACAGTGACTaGACTAATTTACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCAFHSD*TNLHSH
Trigger: GTGGGAATGTAAATTAGTTCAGTCACTGTGGAAAGC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCACTTCATCCACACTGTaGCAGTCCACATGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFTSSTL*QSTWFR
Trigger: TCGAAACCATGTGGACTGGCACAGTGTGGATGAAGT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAACCATTTTCTGCCCAATaGCATGCACAACAAATACAA +
Preference number: 4 (lower is better)
Translates to: WPRISHLRSAPPHGIALKPFSAQ*HAQQIQ
Trigger: TTGTATTTGTTGTGCATGGCATTGGGCAGAAAATGG...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCCCTTGGTCCATTTTCTaGCCAATGCCATGCACAACA +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAPWSIF*PMPCTT
Trigger: TGTTGTGCATGGCATTGGGCAGAAAATGGACCAAGG...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGCCTTGGTCCATTTTCTaGCCAATGCCATGCACAACA +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWPWSIF*PMPCTT
Trigger: TGTTGTGCATGGCATTGGGCAGAAAATGGACCAAGG...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGCCTTGGTCCATTTTCTaGCCAATGCCATGCACAACA +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTPWSIF*PMPCTT
Trigger: TGTTGTGCATGGCATTGGGCAGAAAATGGACCAAGG...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAAATCCTGACTTACTGTaGCTTGTGTCTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTNPDLL*LVSQWH
Trigger: GTGCCATTGAGACACAAGGCACAGTAAGTCAGGATT...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGAATCCTGACTTACTGTaGCTTGTGTCTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKNPDLL*LVSQWH
Trigger: GTGCCATTGAGACACAAGGCACAGTAAGTCAGGATT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGAGAAAACCCTTCCAATaGCTCAGAATCCTGACTTAC +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMRKPFQ*LRILTY
Trigger: GTAAGTCAGGATTCTGAGGCATTGGAAGGGTTTTCT...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCTGTGCCAGTCCACATaGTTTCGACTCAACTTGAAA +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCLCQST*FRLNLK
Trigger: TTTCAAGTTGAGTCGAAACCATGTGGACTGGCACAG...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCACTGTGCCAGTCCACATaGTTTCGACTCAACTTGAAA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSLCQST*FRLNLK
Trigger: TTTCAAGTTGAGTCGAAACCATGTGGACTGGCACAG...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGGAAGTATTGTACCAGTaGATCTGGACAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMEVLYQ*IWTGEM
Trigger: CATTTCACCTGTCCAGATCCACTGGTACAATACTTC...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGGTAGGTTCTTTAGCTaGGTTGAGAAAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKGRFFS*VEKAWL
Trigger: AAGCCAAGCTTTCTCAACCCAGCTAAAGAACCTACC...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGAGATCCTCCCATCTTaGCCTCCCGAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLREILPS*PPEVLG
Trigger: TCCCAACACTTCGGGAGGCCAAGATGGGAGGATCTC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCAGCCTCTTGAGTAGCTaGGACTACAGGTGTACACCA +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTSLLSS*DYRCTP
Trigger: TGGTGTACACCTGTAGTCCCAGCTACTCAAGAGGCT...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGGCATATAAAAGAATATaGCCTGGCTTCAACCCAAGC +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMAYKRI*PGFNPS
Trigger: GCTTGGGTTGAAGCCAGGCCATATTCTTTTATATGC...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAAGTGAGTCACATACTTaGTCATGGAGCCTTGGAATT +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKSESHT*SWSLGI
Trigger: AATTCCAAGGCTCCATGACCAAGTATGTGACTCACT...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTACAGGAAAATCTTTTaGCTTGATCTGACTCCACTG +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPYRKIF*LDLTPL
Trigger: CAGTGGAGTCAGATCAAGCCAAAAGATTTTCCTGTA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCCTAACAATCTGCCAATaGACTATTTTTGGGGAATGC +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPLTICQ*TIFGEC
Trigger: GCATTCCCCAAAAATAGTCCATTGGCAGATTGTTAG...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTCTGACAACTGTTGGGTaGGGAGGAAGCAAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSLTTVG*GGSKLY
Trigger: GTACAACTTGCTTCCTCCCCACCCAACAGTTGTCAG...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGGACCGCAGTGGGTGTaGGTACAGTCAAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIGPQWV*VQSREG
Trigger: ACCTTCCCTTGACTGTACCCACACCCACTGCGGTCC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTAAGCAGGGACCGCAGTaGGTGTGGGTACAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSKQGPQ*VWVQSR
Trigger: CCTTGACTGTACCCACACCCACTGCGGTCCCTGCTT...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGTAGTCCTTATAGCCTaGCCACGTATTTCTCATCTA +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCVVLIA*PRISHL
Trigger: TAGATGAGAAATACGTGGCCAGGCTATAAGGACTAC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTGCCTTGAGTGACAGATaGCATCATCAAAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSALSDR*HHQRAL
Trigger: CAAAGCCCTTTGATGATGCCATCTGTCACTCAAGGC...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTAGGTTGGGCAGGCTGTaGGGAGCCTTGAGTGACAGA +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSRLGRL*GALSDR
Trigger: TCTGTCACTCAAGGCTCCCCACAGCCTGCCCAACCT...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGCACCCCATGTGCCACTaGATTGTGTTTAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTHPMCH*IVFNSH
Trigger: ATGGCTGTTAAACACAATCCAGTGGCACATGGGGTG...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCGGTGGAGTTTTGCCATaGATGGCTCCATCCTCATAT +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAGGVLP*MAPSSY
Trigger: ATATGAGGATGGAGCCATCCATGGCAAAACTCCACC...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp CATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTaGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCA +
Preference number: 4 (lower is better)
Translates to: HAVYPNLLHIQV*LDSLEKVLSDS
Trigger: TGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR CAA 72 bp GTTGCAATTGCCTTTGGGGACTTAGCCAAAAGTTCTTaGCCAAGGCTGATGTTGATAAGGGTATTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: VAIAFGDLAKSS*PRLMLIRVFPR
Trigger: CCTAGGAAATACCCTTATCAACATCAGCCTTGGCAAAGAACTTTTGGCTAAGTCCCCAAAGGCAATTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGTCTGGTACCACTACTTaGTGCTTTAGAAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLSGTTT*CFRKSQ
Trigger: CTGGGATTTTCTAAAGCATCAAGTAGTGGTACCAGA...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTTCTGGTACCACTACTTaGTGCTTTAGAAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCSGTTT*CFRKSQ
Trigger: CTGGGATTTTCTAAAGCATCAAGTAGTGGTACCAGA...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATCTGGTACCACTACTTaGTGCTTTAGAAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSSGTTT*CFRKSQ
Trigger: CTGGGATTTTCTAAAGCATCAAGTAGTGGTACCAGA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCATCAAGAGTAAGTTTTaGCCGCCACTCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTIKSKF*PPLNRQ
Trigger: CTGCCTGTTGAGTGGCGGTCAAAACTTACTCTTGAT...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCGATTCAGCTCTTGCTaGAGGCCTTTAACTAGTTCA +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSRFSSC*RPLTSS
Trigger: TGAACTAGTTAAAGGCCTTCAGCAAGAGCTGAATCG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGCGATTCAGCTCTTGCTaGAGGCCTTTAACTAGTTCA +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTRFSSC*RPLTSS
Trigger: TGAACTAGTTAAAGGCCTTCAGCAAGAGCTGAATCG...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCCGATTCAGCTCTTGCTaGAGGCCTTTAACTAGTTCA +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFRFSSC*RPLTSS
Trigger: TGAACTAGTTAAAGGCCTTCAGCAAGAGCTGAATCG...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTCGATTCAGCTCTTGCTaGAGGCCTTTAACTAGTTCA +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFRFSSC*RPLTSS
Trigger: TGAACTAGTTAAAGGCCTTCAGCAAGAGCTGAATCG...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTGATGCTTTCAATCCGTaGAGCCGTTCTTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFDAFNP*SRSSIS
Trigger: GGAAATAGAAGAACGGCTTCACGGATTGAAAGCATC...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTGATGCTTTCAATCCGTaGAGCCGTTCTTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSDAFNP*SRSSIS
Trigger: GGAAATAGAAGAACGGCTTCACGGATTGAAAGCATC...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGGCAAAATATGGTCTTaGCTTCCAGTATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWGKIWS*LPVFPG
Trigger: CCCAGGAAATACTGGAAGTCAAGACCATATTTTGCC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCGGCAAAATATGGTCTTaGCTTCCAGTATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFGKIWS*LPVFPG
Trigger: CCCAGGAAATACTGGAAGTCAAGACCATATTTTGCC...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGGCAAAATATGGTCTTaGCTTCCAGTATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHGKIWS*LPVFPG
Trigger: CCCAGGAAATACTGGAAGTCAAGACCATATTTTGCC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGTGGATCTGGACAGGTaGAATGTTGCTGTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSVDLDR*NVAVVF
Trigger: AAACACTACAGCAACATTTCACCTGTCCAGATCCAC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCCACAAGGCCTTCTCTaGGTTCAAAATCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSPQGLL*VQNQSC
Trigger: ACAGGATTGATTTTGAACTCAGAGAAGGCCTTGTGG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCCCACAAGGCCTTCTCTaGGTTCAAAATCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAPQGLL*VQNQSC
Trigger: ACAGGATTGATTTTGAACTCAGAGAAGGCCTTGTGG...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TCAAGAGAGTTCAGATTGGATCTAAATTGGGTTTTGCATCATCATCGTGCTCATGGCAACATCCAAGGATaGCCAATAGGCAGTATGCGA +
Preference number: 4 (lower is better)
Translates to: SREFRLDLNWVLHHHRAHGNIQG*PIGSMR
Trigger: TCGCATACTGCCTATTGGTCATCCTTGGATGTTGCC...ATGAGCACGATGATGATGCAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGGAAACAATTACAGCTaGAGAAAACCCTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSGNNYS*RKPFQC
Trigger: GCATTGGAAGGGTTTTCTTCAGCTGTAATTGTTTCC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATTGCACTCTTAAACTTTaGGCCCCTCAGATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHCTLKL*APQMKS
Trigger: GCTTTTCATCTGAGGGGCTCAAAGTTTAAGAGTGCA...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGATTGGGATTACAGGCGTaGACCACGGTGACTAGCTCA +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRLGLQA*TTVTSS
Trigger: TGAGCTAGTCACCGTGGTTCACGCCTGTAATCCCAA...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATCTGAGGCCTTTAGCGTaGGTATTCAGCATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYLRPLA*VFSMKH
Trigger: ATGCTTCATGCTGAATACTCACGCTAAAGGCCTCAG...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGTGTCTACTGTCTAGGTaGTGCAAAGCTGGAATATGG +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWCLLSR*CKAGIW
Trigger: CCATATTCCAGCTTTGCATCACCTAGACAGTAGACA...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCTACTGTCTAGGTaGTGCAAAGCTGGAATATGG +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFCLLSR*CKAGIW
Trigger: CCATATTCCAGCTTTGCATCACCTAGACAGTAGACA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCAATGAAGGAATCACATaGGGAGGTGAAACTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPNEGIT*GGETVK
Trigger: TTTTACAGTTTCACCTCCTCATGTGATTCCTTCATT...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAGTGACCTATTTGTCATaGATTGATAAAAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKVTYLS*IDKRPT
Trigger: TGTGGGCCTTTTATCAATTCATGACAAATAGGTCAC...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGAACAGTTTTGGAGGTaGCCTATTTGTCATGAATTG +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCEQFWR*PICHEL
Trigger: CAATTCATGACAAATAGGTCACCTCCAAAACTGTTC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGCCTTCAAAGAGTTGTaGTTGCAGTCATTGACAACA +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTAFKEL*LQSLTT
Trigger: TGTTGTCAATGACTGCAATCACAACTCTTTGAAGGC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAACAGACAGTGCTGATTaGGCTGCTGGTGCTTACAGG +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPTDSAD*AAGAYR
Trigger: CCTGTAAGCACCAGCAGCTCAATCAGCACTGTCTGT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCACCAAAGAAAGAGCCTaGATAGCCAAAGCAACCCAA +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFTKERA*IAKATQ
Trigger: TTGGGTTGCTTTGGCTATTCAGGCTCTTTCTTTGGT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCCCCACCTTTGCATCCTaGGGTACTCAATATTTAGCT +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAPTFAS*GTQYLA
Trigger: AGCTAAATATTGAGTACCTCAGGATGCAAAGGTGGG...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTACTTCATCCACACTGTaGCAGTCCACATGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSTSSTL*QSTWFR
Trigger: TCGAAACCATGTGGACTGGCACAGTGTGGATGAAGT...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCACTTCATCCACACTGTaGCAGTCCACATGGTTTCGA +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTTSSTL*QSTWFR
Trigger: TCGAAACCATGTGGACTGGCACAGTGTGGATGAAGT...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGTTCTGCCCAATGCCATaGACAACAAATACAATATGG +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMFCPMP*TTNTIW
Trigger: CCATATTGTATTTGTTGTGCATGGCATTGGGCAGAA...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCCCTTGGTCCATTTTCTaGCCAATGCCATGCACAACA +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTPWSIF*PMPCTT
Trigger: TGTTGTGCATGGCATTGGGCAGAAAATGGACCAAGG...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTATTTCCTGGGCGGATaGCACGCAACGCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYYFLGG*HATPRK
Trigger: TTTTCTTGGCGTTGCGTGGCATCCGCCCAGGAAATA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTTCACATCCAGGTCTTaGTTGATTCTCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSFTSRS*LILWRR
Trigger: CCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAA...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGGCCGATTTAGTACTTaGTGGAATAAAGTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPGRFST*WNKVAK
Trigger: TTTTGCAACTTTATTCCAGCAAGTACTAAATCGGCC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGAAGAGAGGCAGTTTCTaGCCTTTAGGAGTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTKRGSF*PLGVVS
Trigger: GGAAACTACTCCTAAAGGGCAGAAACTGCCTCTCTT...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGCCAGTTTCATTCTTCTaGATAGGGCTAGCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKPVSFF*IGLASY
Trigger: ATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGG...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCACTGTTTTGTTGCAATTaGCTTTGGGGACTTAGCCAA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSLFCCN*LWGLSQ
Trigger: TTGGCTAAGTCCCCAAAGGCAATTGCAACAAAACAG...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACACTGTTTTGTTGCAATTaGCTTTGGGGACTTAGCCAA +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTLFCCN*LWGLSQ
Trigger: TTGGCTAAGTCCCCAAAGGCAATTGCAACAAAACAG...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGCTGTCCACGCATTACTaGTATTTTATCAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLLSTHY*YFISLV
Trigger: AACCAGGCTGATAAAATACCAGTAATGCGTGGACAG...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp GTGAAATGTTGCTGTAGTGTTTCAGTATTAATGGTTCTAATCTATAAGCCACTGACTTCCAGTATTTCCTaGGCGGATGCCACGCAACGC +
Preference number: 4 (lower is better)
Translates to: VKCCCSVSVLMVLIYKPLTSSIS*ADATQR
Trigger: GCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGT...CAGTGGCTTATAGATTAGAACCATTAATACTGAAACACTACAGCAACATTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGGTAGGTTCTTTAGCTaGGTTGAGAAAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHGRFFS*VEKAWL
Trigger: AAGCCAAGCTTTCTCAACCCAGCTAAAGAACCTACC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTTCACAGGGCTTGGTATaGTTGAAATGCCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCSQGLV*LKCLHS
Trigger: AGAATGAAGGCATTTCAACCATACCAAGCCCTGTGA...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATCACAGGGCTTGGTATaGTTGAAATGCCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSSQGLV*LKCLHS
Trigger: AGAATGAAGGCATTTCAACCATACCAAGCCCTGTGA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATGCATATAAAAGAATATaGCCTGGCTTCAACCCAAGC +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYAYKRI*PGFNPS
Trigger: GCTTGGGTTGAAGCCAGGCCATATTCTTTTATATGC...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGCATATAAAAGAATATaGCCTGGCTTCAACCCAAGC +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTAYKRI*PGFNPS
Trigger: GCTTGGGTTGAAGCCAGGCCATATTCTTTTATATGC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATTAGGGGAAACAGTCTaGTATAAGACATGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSLGETV*YKTWLG
Trigger: TCCCAACCATGTCTTATACCAGACTGTTTCCCCTAA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTACAGAGGTGTATGTGTaGAGGGGAGGTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVITEVYV*RGGWGT
Trigger: TGTCCCCCAACCTCCCCTCCACACATACACCTCTGT...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACCTGACAACTGTTGGGTaGGGAGGAAGCAAGTTGTAC +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYLTTVG*GGSKLY
Trigger: GTACAACTTGCTTCCTCCCCACCCAACAGTTGTCAG...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGTAGTCCTTATAGCCTaGCCACGTATTTCTCATCTA +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLVVLIA*PRISHL
Trigger: TAGATGAGAAATACGTGGCCAGGCTATAAGGACTAC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGTTCAAGACATGGAATTaGCTAGGAGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMFKTWN*LGEDPK
Trigger: TTTTGGATCCTCTCCTAGCCAATTCCATGTCTTGAA...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGGCAAATAAAATCCTATaGAAGGCTTCTGCCCTATCT +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMANKIL*KASALS
Trigger: AGATAGGGCAGAAGCCTTCCATAGGATTTTATTTGC...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGTTCTCCAGGAACTCTTaGCTCATTTCTTGTGTATGC +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLFSRNS*LISCVC
Trigger: GCATACACAAGAAATGAGCCAAGAGTTCCTGGAGAA...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAAGACACGTAGACCAATaGAACACAATAGAGAACACA +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKRHVDQ*NTIENT
Trigger: TGTGTTCTCTATTGTGTTCCATTGGTCTACGTGTCT...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGATTCCTTCTGAGAACTaGAATAAGAAGAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKIPSEN*NKKRMP
Trigger: GGGCATCCTCTTCTTATTCCAGTTCTCAGAAGGAAT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCCACAGACATCATACTaGATGAGCAAAAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSPQTSY*MSKSWN
Trigger: GTTCCAGCTTTTGCTCATCCAGTATGATGTCTGTGG...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp TATCGATTAGGGGAAACAGTCTGGTATAAGACATGGTaGGGAATCAGGGGACTAGGTTCTAATTCTGACTGT +
Preference number: 4 (lower is better)
Translates to: YRLGETVWYKTW*GIRGLGSNSDC
Trigger: ACAGTCAGAATTAGAACCTAGTCCCCTGATTCCCAACCATGTCTTATACCAGACTGTTTCCCCTAATCGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTATATCTTCTCCATTTaGACAGAGAAGGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSYIFSI*TEKGGR
Trigger: TCTCCCTCCCTTCTCTGTTCAAATGGAGAAGATATA...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323669.10
ENST00000674014.1
CDS-3UTR TCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGGTTTCGACTCAACTTaGAACTATGAACAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTGFDST*NYEQLG
Trigger: CCCAAGCTGTTCATAGTTTCAAGTTGAGTCGAAACC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323669.10
ENST00000674014.1
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTCTGGTACCACTACTTaGTGCTTTAGAAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSSGTTT*CFRKSQ
Trigger: CTGGGATTTTCTAAAGCATCAAGTAGTGGTACCAGA...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp GAGTTCAAAATCAATCCTGTGATCCAACTCCAATGCAGAATCGAGGAAGCCAGATGTTTGTGTCATAGATaGTGCTTTCAATCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: EFKINPVIQLQCRIEEARCLCHR*CFQSVK
Trigger: CTTCACGGATTGAAAGCATCATCTATGACACAAACA...TCTGGCTTCCTCGATTCTGCATTGGAGTTGGATCACAGGATTGATTTTGAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGTGGATCTGGACAGGTaGAATGTTGCTGTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTVDLDR*NVAVVF
Trigger: AAACACTACAGCAACATTTCACCTGTCCAGATCCAC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGTCAAAATCAATCCTGTaGTCCAACTCCAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLSKSIL*SNSNAE
Trigger: TTCTGCATTGGAGTTGGATCACAGGATTGATTTTGA...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000674014.1
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCGGAGGAATCAGATTGTaGTTTGTAGCCTTTACATGC +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFGGIRL*FVAFTC
Trigger: GCATGTAAAGGCTACAAATCACAATCTGATTCCTCC...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTGGAGGAATCAGATTGTaGTTTGTAGCCTTTACATGC +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFGGIRL*FVAFTC
Trigger: GCATGTAAAGGCTACAAATCACAATCTGATTCCTCC...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGGAGGAATCAGATTGTaGTTTGTAGCCTTTACATGC +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHGGIRL*FVAFTC
Trigger: GCATGTAAAGGCTACAAATCACAATCTGATTCCTCC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATGGTTTCGACTCAACTTaGAACTATGAACAGCATCTT +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYGFDST*NYEQHL
Trigger: AAGATGCTGTTCATAGTTTCAAGTTGAGTCGAAACC...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGTCTCAATGGCACATTaGGAAACAATGTGCACTAGT +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTVSMAH*ETMCTS
Trigger: ACTAGTGCACATTGTTTCTCAATGTGCCATTGAGAC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGTCTCAATGGCACATTaGGAAACAATGTGCACTAGT +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWVSMAH*ETMCTS
Trigger: ACTAGTGCACATTGTTTCTCAATGTGCCATTGAGAC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTTGCACTCTTAAACTTTaGGCCCCTCAGATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSCTLKL*APQMKS
Trigger: GCTTTTCATCTGAGGGGCTCAAAGTTTAAGAGTGCA...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATCTAAAAGGTCACATGTaGATCAAGTCATTGAACAGC +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYLKGHM*IKSLNS
Trigger: GCTGTTCAATGACTTGATTCACATGTGACCTTTTAG...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAACAGGGATGGCTACTaGTCCCCTCTAGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASNRDGY*SPLGNS
Trigger: GGAGTTACCTAGAGGGGATCAGTAGCCATCCCTGTT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTAAGTTCTTATGCATTTaGGTGTCATACCACCTACAG +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCKFLCI*VSYHLQ
Trigger: CTGTAGGTGGTATGACACTCAAATGCATAAGAACTT...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGAAGCATGTTCAGTGTaGGTACTTCAAAAGATAACA +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCEACSV*VLQKIT
Trigger: TGTTATCTTTTGAAGTACTCACACTGAACATGCTTC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGCTGTGATACGGTACTaGCAATTTCTTTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTAVIRY*QFLFLL
Trigger: CAAAAGGAAAAGAAATTGTCAGTACCGTATCACAGC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATAATCACATGAGGAGGTaGAACTGTAAAACGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYNHMRR*NCKTKE
Trigger: TTCCTTCGTTTTACAGTTTCACCTCCTCATGTGATT...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGAATGAAGGAATCACATaGGGAGGTGAAACTGTAAAA +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMNEGIT*GGETVK
Trigger: TTTTACAGTTTCACCTCCTCATGTGATTCCTTCATT...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAACGGTCACTTACAAAATaGAGGAATCACATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALERSLTK*RNHMRR
Trigger: CCTCCTCATGTGATTCCTTCATTTTGTAAGTGACCG...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTTCCCCAACATATCCTaGCAACTGTTGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSFPNIS*QLLGGE
Trigger: CTCCCCACCCAACAGTTGTCAGGATATGTTGGGGAA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCGCCTTCAAAGAGTTGTaGTTGCAGTCATTGACAACA +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAAFKEL*LQSLTT
Trigger: TGTTGTCAATGACTGCAATCACAACTCTTTGAAGGC...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTGCACCAGTTCCAGCTaGGAAAATCAGAACTGGACA +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYCTSSS*ENQNWT
Trigger: TGTCCAGTTCTGATTTTCTCAGCTGGAACTGGTGCA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACGATCTTCAGCAAAGCTaGTACAAGCAAGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYDLQQS*YKQAMG
Trigger: CCCCATTGCTTGCTTGTATCAGCTTTGCTGAAGATC...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATTATGTCCATTGCACTaGTGTTCAGCATATCCCTTA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSLCPLH*CSAYPL
Trigger: TAAGGGATATGCTGAACAGCAGTGCAATGGACATAA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGGGACAGGTGAAATGTTaGTGTAGTGTTTCAGTATTA +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMGQVKC*CSVSVL
Trigger: TAATACTGAAACACTACAGCAACATTTCACCTGTCC...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGAAATTCTCAACCGGACAGGTGAAATGTTaGTGTAGTGTTTCAGTATTA +
Preference number: 4 (lower is better)
Translates to: RNAKKTANGDPIQKKFSTGQVKC*CSVSVL
Trigger: TAATACTGAAACACTACAGCAACATTTCACCTGTCC...GGTTGAGAATTTCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTCGAGGAAGCCAGAACTaGTATGTGGAAGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASRGSQN*YVEGSV
Trigger: CACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCG...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTTTCACATCCAGGTCTTaGTTGATTCTCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSFTSRS*LILWRR
Trigger: CCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAA...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAAATCCTGACTTACTGTaGCTTGTGTCTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALENPDLL*LVSQWH
Trigger: GTGCCATTGAGACACAAGGCACAGTAAGTCAGGATT...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGCATCCAATGTTAACATaGACAGACATAGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMHPMLT*TDIETR
Trigger: CCTTGTTTCTATGTCTGTGCATGTTAACATTGGATG...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGAAGATTCCTAAGGCTTaGTTCACATACAAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMKIPKA*FTYKRA
Trigger: TGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTT...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATACCACCTCACGGAATTaGACTGAAATTCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYTTSRN*TEIPRL
Trigger: CAGTCTAGGAATTTCAGTGCAATTCCGTGAGGTGGT...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTCATATCACCCCATGTaGCACTGGATTGTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFSYHPM*HWIVFN
Trigger: GTTAAACACAATCCAGTGGCACATGGGGTGATATGA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCCCAGTTTCATTCTTCTaGATAGGGCTAGCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAPVSFF*IGLASY
Trigger: ATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGG...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCCTGTTTTGTTGCAATTaGCTTTGGGGACTTAGCCAA +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGALFCCN*LWGLSQ
Trigger: TTGGCTAAGTCCCCAAAGGCAATTGCAACAAAACAG...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGTTGATAGTGTCTTTTaGTGTGCAGAGTGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCVDSVF*CAECFN
Trigger: ATTAAAGCACTCTGCACAGCAAAAGACACTATCAAC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCATCCATGTGGCTGGCTaGAAAGGACATGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAIHVAG*KGHDFV
Trigger: AACAAAATCATGTCCTTTGCAGCCAGCCACATGGAT...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGATCCATGTGGCTGGCTaGAAAGGACATGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWIHVAG*KGHDFV
Trigger: AACAAAATCATGTCCTTTGCAGCCAGCCACATGGAT...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTAACCTCTATGAAGTCTaGTACCACTACTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCNLYEV*YHYLML
Trigger: AAGCATCAAGTAGTGGTACCAGACTTCATAGAGGTT...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGCTTGTCTTCTAATGTaGCTTCTTCTACATAACCTC +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLACLLM*LLLHNL
Trigger: GAGGTTATGTAGAAGAAGCCACATTAGAAGACAAGC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTTCATACAGCCGAACTaGATTCCAGCCAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSFIQPN*IPASHY
Trigger: ATAATGACTGGCTGGAATCCAGTTCGGCTGTATGAA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGAAGTATTGTACCAGTaGATCTGGACAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHEVLYQ*IWTGEM
Trigger: CATTTCACCTGTCCAGATCCACTGGTACAATACTTC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCGAAGTATTGTACCAGTaGATCTGGACAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAEVLYQ*IWTGEM
Trigger: CATTTCACCTGTCCAGATCCACTGGTACAATACTTC...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTTGGGTTGAGAAAGCTTaGCTTCATATGTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCWVEKA*LHMFIR
Trigger: CCTTATGAACATATGAAGCCAAGCTTTCTCAACCCA...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTCACAGGGCTTGGTATaGTTGAAATGCCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSSQGLV*LKCLHS
Trigger: AGAATGAAGGCATTTCAACCATACCAAGCCCTGTGA...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTTCTTGCTTGATTCTCTaGAGAAGGTTTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCSCLIL*RRFCQT
Trigger: AGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGA...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGTCTTGCTTGATTCTCTaGAGAAGGTTTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKSCLIL*RRFCQT
Trigger: AGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGA...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTGCCTTGTGTCTCAATaGCACATTGAGAAACAATGT +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYCLVSQ*HIEKQC
Trigger: ACATTGTTTCTCAATGTGCCATTGAGACACAAGGCA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGTACACCACTACAAGTaGCTAATTTTTGTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPVHHYK*LIFVSF
Trigger: AAAACTGACAAAAATTAGCCACTTGTAGTGGTGTAC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGCATATAAAAGAATATaGCCTGGCTTCAACCCAAGC +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHAYKRI*PGFNPS
Trigger: GCTTGGGTTGAAGCCAGGCCATATTCTTTTATATGC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTAGTGAGTCACATACTTaGTCATGGAGCCTTGGAATT +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFSESHT*SWSLGI
Trigger: AATTCCAAGGCTCCATGACCAAGTATGTGACTCACT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATACAGGAAAATCTTTTaGCTTGATCTGACTCCACTG +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSYRKIF*LDLTPL
Trigger: CAGTGGAGTCAGATCAAGCCAAAAGATTTTCCTGTA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCTGACTGTCATTCATTaGCCATGTGATTGTATAGGG +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSLTVIH*PCDCIG
Trigger: CCCTATACAATCACATGGCCAATGAATGACAGTCAG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGTTAGGGGAAACAGTCTaGTATAAGACATGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTLGETV*YKTWLG
Trigger: TCCCAACCATGTCTTATACCAGACTGTTTCCCCTAA...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAATCATCAAAGGGCTTTaGTTGTCATCAGACCTATGT +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSIIKGL*LSSDLC
Trigger: ACATAGGTCTGATGACAACCAAAGCCCTTTGATGAT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGTTCAAGACATGGAATTaGCTAGGAGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKFKTWN*LGEDPK
Trigger: TTTTGGATCCTCTCCTAGCCAATTCCATGTCTTGAA...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTTTCAAGACATGGAATTaGCTAGGAGAGGATCCAAAA +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCFKTWN*LGEDPK
Trigger: TTTTGGATCCTCTCCTAGCCAATTCCATGTCTTGAA...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTTGTGGCTTATGGGGTaGGAAATAAGGTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYLWLMG*EIRSDL
Trigger: CAGGTCAGACCTTATTTCCCACCCCATAAGCCACAA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATGCAAATAAAATCCTATaGAAGGCTTCTGCCCTATCT +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYANKIL*KASALS
Trigger: AGATAGGGCAGAAGCCTTCCATAGGATTTTATTTGC...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTTCTCCAGGAACTCTTaGCTCATTTCTTGTGTATGC +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFFSRNS*LISCVC
Trigger: GCATACACAAGAAATGAGCCAAGAGTTCCTGGAGAA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGATACAAGCAAGCAATaGGGAAAGGAACACGTTGTT +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSDTSKQ*GKEHVV
Trigger: AACAACGTGTTCCTTTCCCCATTGCTTGCTTGTATC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGAGACACGTAGACCAATaGAACACAATAGAGAACACA +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKRHVDQ*NTIENT
Trigger: TGTGTTCTCTATTGTGTTCCATTGGTCTACGTGTCT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATATTCCTTCTGAGAACTaGAATAAGAAGAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHIPSEN*NKKRMP
Trigger: GGGCATCCTCTTCTTATTCCAGTTCTCAGAAGGAAT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTGTTGCAATTGCCTTTaGGGACTTAGCCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSCCNCL*GLSQKF
Trigger: GAACTTTTGGCTAAGTCCCCAAAGGCAATTGCAACA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAAATTTGCTTAGATTATaGCTTCCAGCTGTATCCATG +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKNLLRL*LPAVSM
Trigger: CATGGATACAGCTGGAAGCCATAATCTAAGCAAATT...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp CAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTTTGTCAGACTCATAAT +
Preference number: 4 (lower is better)
Translates to: QFTQTFFTSRSC*ILWRRFCQTHN
Trigger: ATTATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
3UTR CAA 72 bp TTTATATGTACCACATTTTCTTTATCCAGTCCACTGTaGATGGGCAGCCACGTTGATCTGTCTTTGCTACTG +
Preference number: 4 (lower is better)
Translates to: FICTTFSLSSPL*MGSHVDLSLLL
Trigger: CAGTAGCAAAGACAGATCAACGTGGCTGCCCATCAACAGTGGACTGGATAAAGAAAATGTGGTACATATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCTCAACTTGAAACTATaGACAGCTTGGGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSLNLKL*TAWECF
Trigger: AAAGCATTCCCAAGCTGTTCATAGTTTCAAGTTGAG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323669.10
ENST00000674014.1
CDS-3UTR TCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTCTCAACTTGAAACTATaGACAGCTTGGGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFLNLKL*TAWECF
Trigger: AAAGCATTCCCAAGCTGTTCATAGTTTCAAGTTGAG...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323669.10
ENST00000674014.1
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACGATGCTTTCAATCCGTaGAGCCGTTCTTCTATTTCC +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYDAFNP*SRSSIS
Trigger: GGAAATAGAAGAACGGCTTCACGGATTGAAAGCATC...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTGTTTGTGTCATAGATaGTGCTTTCAATCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSCLCHR*CFQSVK
Trigger: CTTCACGGATTGAAAGCATCATCTATGACACAAACA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGTTTGTGTCATAGATaGTGCTTTCAATCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSCLCHR*CFQSVK
Trigger: CTTCACGGATTGAAAGCATCATCTATGACACAAACA...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACGGCAAAATATGGTCTTaGCTTCCAGTATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYGKIWS*LPVFPG
Trigger: CCCAGGAAATACTGGAAGTCAAGACCATATTTTGCC...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTCAAAATCAATCCTGTaGTCCAACTCCAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFSKSIL*SNSNAE
Trigger: TTCTGCATTGGAGTTGGATCACAGGATTGATTTTGA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000674014.1
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACCCACAAGGCCTTCTCTaGGTTCAAAATCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYPQGLL*VQNQSC
Trigger: ACAGGATTGATTTTGAACTCAGAGAAGGCCTTGTGG...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCGAAATCTCCGTATCTTaGCACACACATTTTAACGGA +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFEISVS*HTHFNG
Trigger: TCCGTTAAAATGTGTGTGTCAAGATACGGAGATTTC...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGAAATCTCCGTATCTTaGCACACACATTTTAACGGA +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHEISVS*HTHFNG
Trigger: TCCGTTAAAATGTGTGTGTCAAGATACGGAGATTTC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR TCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGGTTTCGACTCAACTTaGAACTATGAACAGCATCTT +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHGFDST*NYEQHL
Trigger: AAGATGCTGTTCATAGTTTCAAGTTGAGTCGAAACC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGTCTCAATGGCACATTaGGAAACAATGTGCACTAGT +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTVSMAH*ETMCTS
Trigger: ACTAGTGCACATTGTTTCTCAATGTGCCATTGAGAC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGGAAACAATTACAGCTaGAGAAAACCCTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEGNNYS*RKPFQC
Trigger: GCATTGGAAGGGTTTTCTTCAGCTGTAATTGTTTCC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGCTAAAAGGTCACATGTaGATCAAGTCATTGAACAGC +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTLKGHM*IKSLNS
Trigger: GCTGTTCAATGACTTGATTCACATGTGACCTTTTAG...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGATTCTACTATCTTATaGAGAAAGGAGGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTDSTIL*RKEEVR
Trigger: TCTCACCTCCTCCTTTCTTCATAAGATAGTAGAATC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTGATTCTACTATCTTATaGAGAAAGGAGGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSDSTIL*RKEEVR
Trigger: TCTCACCTCCTCCTTTCTTCATAAGATAGTAGAATC...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGGAAGCATGTTCAGTGTaGGTACTTCAAAAGATAACA +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKEACSV*VLQKIT
Trigger: TGTTATCTTTTGAAGTACTCACACTGAACATGCTTC...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACTGAGGCCTTTAGCGTaGGTATTCAGCATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPLRPLA*VFSMKH
Trigger: ATGCTTCATGCTGAATACTCACGCTAAAGGCCTCAG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATAATCACATGAGGAGGTaGAACTGTAAAACGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHNHMRR*NCKTKE
Trigger: TTCCTTCGTTTTACAGTTTCACCTCCTCATGTGATT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATAATGAAGGAATCACATaGGGAGGTGAAACTGTAAAA +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYNEGIT*GGETVK
Trigger: TTTTACAGTTTCACCTCCTCATGTGATTCCTTCATT...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCGTGACCTATTTGTCATaGATTGATAAAAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAVTYLS*IDKRPT
Trigger: TGTGGGCCTTTTATCAATTCATGACAAATAGGTCAC...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTGAACAGTTTTGGAGGTaGCCTATTTGTCATGAATTG +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSEQFWR*PICHEL
Trigger: CAATTCATGACAAATAGGTCACCTCCAAAACTGTTC...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGCCTTCAAAGAGTTGTaGTTGCAGTCATTGACAACA +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYAFKEL*LQSLTT
Trigger: TGTTGTCAATGACTGCAATCACAACTCTTTGAAGGC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGCTTTCCACAGTGACTaGACTAATTTACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTAFHSD*TNLHSH
Trigger: GTGGGAATGTAAATTAGTTCAGTCACTGTGGAAAGC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGGCTGCAAAGGACATaGTTTTGTTCTTTTTATGGC +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSWLQRT*FCSFYG
Trigger: GCCATAAAAAGAACAAAATCATGTCCTTTGCAGCCA...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTACGATTCTTGAAGTCTaGAATATGCAGAATCGAGGA +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSTILEV*NMQNRG
Trigger: TCCTCGATTCTGCATATTTCAGACTTCAAGAATCGT...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATATATCGAAATTTTCCTaGATCTGCTGGCCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHISKFS*ICWPLK
Trigger: TTTTAGGGGCCAGCAGATGCAGGAAAATTTCGATAT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGATATCGAAATTTTCCTaGATCTGCTGGCCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTISKFS*ICWPLK
Trigger: TTTTAGGGGCCAGCAGATGCAGGAAAATTTCGATAT...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTATATCGAAATTTTCCTaGATCTGCTGGCCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFISKFS*ICWPLK
Trigger: TTTTAGGGGCCAGCAGATGCAGGAAAATTTCGATAT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTATATCGAAATTTTCCTaGATCTGCTGGCCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSISKFS*ICWPLK
Trigger: TTTTAGGGGCCAGCAGATGCAGGAAAATTTCGATAT...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTTCTGCCCAATGCCATaGACAACAAATACAATATGG +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSFCPMP*TTNTIW
Trigger: CCATATTGTATTTGTTGTGCATGGCATTGGGCAGAA...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCTGCCCAATGCCATaGACAACAAATACAATATGG +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFFCPMP*TTNTIW
Trigger: CCATATTGTATTTGTTGTGCATGGCATTGGGCAGAA...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCCATTTTCTGCCCAATaGCATGCACAACAAATACAA +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSPFSAQ*HAQQIQ
Trigger: TTGTATTTGTTGTGCATGGCATTGGGCAGAAAATGG...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCCATTTTCTGCCCAATaGCATGCACAACAAATACAA +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSPFSAQ*HAQQIQ
Trigger: TTGTATTTGTTGTGCATGGCATTGGGCAGAAAATGG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTTATGTCCATTGCACTaGTGTTCAGCATATCCCTTA +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFLCPLH*CSAYPL
Trigger: TAAGGGATATGCTGAACAGCAGTGCAATGGACATAA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATTTATGTCCATTGCACTaGTGTTCAGCATATCCCTTA +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHLCPLH*CSAYPL
Trigger: TAAGGGATATGCTGAACAGCAGTGCAATGGACATAA...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGTTATGTCCATTGCACTaGTGTTCAGCATATCCCTTA +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWLCPLH*CSAYPL
Trigger: TAAGGGATATGCTGAACAGCAGTGCAATGGACATAA...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAATACATTATGTCCATTaGACTGCTGTTCAGCATATC +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTIHYVH*TAVQHI
Trigger: GATATGCTGAACAGCAGTGCAATGGACATAATGTAT...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GAGTTCAAAATCAATCCTGTGATCCAACTCCAATGCAGAATCGAGGAAGCCAGAATACATTATGTCCATTaGACTGCTGTTCAGCATATC +
Preference number: 4 (lower is better)
Translates to: EFKINPVIQLQCRIEEARIHYVH*TAVQHI
Trigger: GATATGCTGAACAGCAGTGCAATGGACATAATGTAT...TCTGGCTTCCTCGATTCTGCATTGGAGTTGGATCACAGGATTGATTTTGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR GCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCAACTCTTCTTCCTTTTaGAGCAACTGTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFNSSSF*SNCSYS
Trigger: GCTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATAACTCTTCTTCCTTTTaGAGCAACTGTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHNSSSF*SNCSYS
Trigger: GCTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTAACTCTTCTTCCTTTTaGAGCAACTGTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSNSSSF*SNCSYS
Trigger: GCTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTT...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCAACTCTTCTTCCTTTTaGAGCAACTGTTCATACAGC +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGANSSSF*SNCSYS
Trigger: GCTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTT...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGGACAGGTGAAATGTTaGTGTAGTGTTTCAGTATTA +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLGQVKC*CSVSVL
Trigger: TAATACTGAAACACTACAGCAACATTTCACCTGTCC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGTTTGCATCATCATCGTaGTCATGTTTATACATGAAG +
Preference number: 4 (lower is better)
Translates to: IAKATQSRKNKASSITQMFASSS*SCLYMK
Trigger: CTTCATGTATAAACATGAGCACGATGATGATGCAAA...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTTTGTAGCCTTTACATaGAGTTTACCCAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYFVAFT*SLPKPS
Trigger: AGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGCATCCAATGTTAACATaGACAGACATAGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKHPMLT*TDIETR
Trigger: CCTTGTTTCTATGTCTGTGCATGTTAACATTGGATG...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGGCCGATTTAGTACTTaGTGGAATAAAGTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSGRFST*WNKVAK
Trigger: TTTTGCAACTTTATTCCAGCAAGTACTAAATCGGCC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTTCACCCTAACAATCTaGCAATGGACTATTTTTGGG +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSFTLTI*QWTIFG
Trigger: CCCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATTCATATCACCCCATGTaGCACTGGATTGTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYSYHPM*HWIVFN
Trigger: GTTAAACACAATCCAGTGGCACATGGGGTGATATGA...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAATCCATGTGGCTGGCTaGAAAGGACATGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEIHVAG*KGHDFV
Trigger: AACAAAATCATGTCCTTTGCAGCCAGCCACATGGAT...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATAACCTCTATGAAGTCTaGTACCACTACTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHNLYEV*YHYLML
Trigger: AAGCATCAAGTAGTGGTACCAGACTTCATAGAGGTT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTAACCTCTATGAAGTCTaGTACCACTACTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFNLYEV*YHYLML
Trigger: AAGCATCAAGTAGTGGTACCAGACTTCATAGAGGTT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGCTTGTCTTCTAATGTaGCTTCTTCTACATAACCTC +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSACLLM*LLLHNL
Trigger: GAGGTTATGTAGAAGAAGCCACATTAGAAGACAAGC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCGCTTGTCTTCTAATGTaGCTTCTTCTACATAACCTC +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFACLLM*LLLHNL
Trigger: GAGGTTATGTAGAAGAAGCCACATTAGAAGACAAGC...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGACAACAAATACAATATaGGTAGTCTGTGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLTTNTI*VVCDGL
Trigger: CAAGCCATCACAGACTACCCATATTGTATTTGTTGT...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAACAACAAATACAATATaGGTAGTCTGTGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTTTNTI*VVCDGL
Trigger: CAAGCCATCACAGACTACCCATATTGTATTTGTTGT...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGAAGTATTGTACCAGTaGATCTGGACAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEEVLYQ*IWTGEM
Trigger: CATTTCACCTGTCCAGATCCACTGGTACAATACTTC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGAAGTATTGTACCAGTaGATCTGGACAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTEVLYQ*IWTGEM
Trigger: CATTTCACCTGTCCAGATCCACTGGTACAATACTTC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTGGGTTGAGAAAGCTTaGCTTCATATGTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFWVEKA*LHMFIR
Trigger: CCTTATGAACATATGAAGCCAAGCTTTCTCAACCCA...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATTGGGTTGAGAAAGCTTaGCTTCATATGTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHWVEKA*LHMFIR
Trigger: CCTTATGAACATATGAAGCCAAGCTTTCTCAACCCA...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTCACAGGGCTTGGTATaGTTGAAATGCCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTSQGLV*LKCLHS
Trigger: AGAATGAAGGCATTTCAACCATACCAAGCCCTGTGA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAATCACAGGGCTTGGTATaGTTGAAATGCCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALESQGLV*LKCLHS
Trigger: AGAATGAAGGCATTTCAACCATACCAAGCCCTGTGA...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGAAATTCTCAACCAGATTGGATCTAAATTaGGTTTTGCATCATCATCGT +
Preference number: 4 (lower is better)
Translates to: RNAKKTANGDPIQKKFSTRLDLN*VLHHHR
Trigger: ACGATGATGATGCAAAACCCAATTTAGATCCAATCT...GGTTGAGAATTTCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTCTTGCTTGATTCTCTaGAGAAGGTTTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSSCLIL*RRFCQT
Trigger: AGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGAAATGTACCCATTATaGAGTACTCCGTGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHEMYPL*STPCQV
Trigger: AACTTGACACGGAGTACTCCATAATGGGTACATTTC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGCCTTGTGTCTCAATaGCACATTGAGAAACAATGT +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFCLVSQ*HIEKQC
Trigger: ACATTGTTTCTCAATGTGCCATTGAGACACAAGGCA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGTGTGATTGTATAGGGTaGAATCGGTCACTTACAAAA +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLCDCIG*NRSLTK
Trigger: TTTTGTAAGTGACCGATTCCACCCTATACAATCACA...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTCTAACAATCTGCCAATaGACTATTTTTGGGGAATGC +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFLTICQ*TIFGEC
Trigger: GCATTCCCCAAAAATAGTCCATTGGCAGATTGTTAG...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATTCTTACTGGCAAAGTTaGGATTATGGCAGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYSYWQS*DYGSLR
Trigger: TCTAAGGCTGCCATAATCCCAACTTTGCCAGTAAGA...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGAATGGGAAGGTGAGTaGAAAGGTAGTAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLREWEGE*KGSRSR
Trigger: CCTACTCCTACTACCTTTCCACTCACCTTCCCATTC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGTAGTCCTTATAGCCTaGCCACGTATTTCTCATCTA +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYVVLIA*PRISHL
Trigger: TAGATGAGAAATACGTGGCCAGGCTATAAGGACTAC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTATCATCAAAGGGCTTTaGTTGTCATCAGACCTATGT +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFIIKGL*LSSDLC
Trigger: ACATAGGTCTGATGACAACCAAAGCCCTTTGATGAT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGATTGTGGCTTATGGGGTaGGAAATAAGGTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRLWLMG*EIRSDL
Trigger: CAGGTCAGACCTTATTTCCCACCCCATAAGCCACAA...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGCAAATAAAATCCTATaGAAGGCTTCTGCCCTATCT +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTANKIL*KASALS
Trigger: AGATAGGGCAGAAGCCTTCCATAGGATTTTATTTGC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTTGTCACAGGAAAGGGTaGAGTTTTGCCATGGATGGC +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASCHRKG*SFAMDG
Trigger: GCCATCCATGGCAAAACTCCACCCTTTCCTGTGACA...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGATACAAGCAAGCAATaGGGAAAGGAACACGTTGTT +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEDTSKQ*GKEHVV
Trigger: AACAACGTGTTCCTTTCCCCATTGCTTGCTTGTATC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAATTCTAAAATTCAGATaGAACCAAAGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKILKFR*NQRKSL
Trigger: CAGGCTCTTTCTTTGGTTCCATCTGAATTTTAGAAT...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTGTTGCAATTGCCTTTaGGGACTTAGCCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTCCNCL*GLSQKF
Trigger: GAACTTTTGGCTAAGTCCCCAAAGGCAATTGCAACA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCACTAACTGGTGTGAGATaGTATCTTATTGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSLTGVR*YLIVVL
Trigger: CAAAACCACAATAAGATACCATCTCACACCAGTTAG...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGCTAACTGGTGTGAGATaGTATCTTATTGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKLTGVR*YLIVVL
Trigger: CAAAACCACAATAAGATACCATCTCACACCAGTTAG...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGAATTTGCTTAGATTATaGCTTCCAGCTGTATCCATG +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLNLLRL*LPAVSM
Trigger: CATGGATACAGCTGGAAGCCATAATCTAAGCAAATT...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAATCAAAATCAATCCTGTaGTCCAACTCCAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALESKSIL*SNSNAE
Trigger: TTCTGCATTGGAGTTGGATCACAGGATTGATTTTGA...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357758.3
ENST00000395606.5
CDS-3UTR TCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGACCACAAGGCCTTCTCTaGGTTCAAAATCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRPQGLL*VQNQSC
Trigger: ACAGGATTGATTTTGAACTCAGAGAAGGCCTTGTGG...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGGTTTCGACTCAACTTaGAACTATGAACAGCATCTT +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEGFDST*NYEQHL
Trigger: AAGATGCTGTTCATAGTTTCAAGTTGAGTCGAAACC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTAATGCCTCAGAATCCTaGCTTACTGTGCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSNASES*LTVPCV
Trigger: GACACAAGGCACAGTAAGTCAGGATTCTGAGGCATT...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGCACTCTTAAACTTTaGGCCCCTCAGATGAAAAGC +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPCTLKL*APQMKS
Trigger: GCTTTTCATCTGAGGGGCTCAAAGTTTAAGAGTGCA...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGATTCTACTATCTTATaGAGAAAGGAGGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEDSTIL*RKEEVR
Trigger: TCTCACCTCCTCCTTTCTTCATAAGATAGTAGAATC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAAAGTTCTTATGCATTTaGGTGTCATACCACCTACAG +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEKFLCI*VSYHLQ
Trigger: CTGTAGGTGGTATGACACTCAAATGCATAAGAACTT...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCTAACTAAAGTTCAGTaGTCTAATCAGTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSLTKVQ*SNQYLG
Trigger: TCCCAAGTACTGATTAGATCACTGAACTTTAGTTAG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCTTGAGGCACAGGAATaGCAGCGGAATACAGATAAG +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSLEAQE*QRNTDK
Trigger: CTTATCTGTATTCCGCTGTCATTCCTGTGCCTCAAG...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACGGTCACTTACAAAATaGAGGAATCACATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPRSLTK*RNHMRR
Trigger: CCTCCTCATGTGATTCCTTCATTTTGTAAGTGACCG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCAGATTAAAGCTTGCTaGTGCTTTAATCTGAGCTTA +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSQIKAC*CFNLSL
Trigger: TAAGCTCAGATTAAAGCATCAGCAAGCTTTAATCTG...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGTGACCTATTTGTCATaGATTGATAAAAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEVTYLS*IDKRPT
Trigger: TGTGGGCCTTTTATCAATTCATGACAAATAGGTCAC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGAACAGTTTTGGAGGTaGCCTATTTGTCATGAATTG +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSEQFWR*PICHEL
Trigger: CAATTCATGACAAATAGGTCACCTCCAAAACTGTTC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACGTGTACTTTATCCTCTaGTGTTCTAGAGGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYVYFIL*CSRGSC
Trigger: ACAACTCCCTCTAGAACATCAGAGGATAAAGTACAC...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGATTCTTGGAGTTAGCCTaGAGACCTCAGAGCTATGGT +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRFLELA*RPQSYG
Trigger: ACCATAGCTCTGAGGTCTTCAGGCTAACTCCAAGAA...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTTCTTGGAGTTAGCCTaGAGACCTCAGAGCTATGGT +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSFLELA*RPQSYG
Trigger: ACCATAGCTCTGAGGTCTTCAGGCTAACTCCAAGAA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAGCTGTCAGACTGTCATaGCCATGCACCAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRAVRLS*PCTNLF
Trigger: AAAGAGATTGGTGCATGGTCATGACAGTCTGACAGC...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTGCTGTCAGACTGTCATaGCCATGCACCAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASAVRLS*PCTNLF
Trigger: AAAGAGATTGGTGCATGGTCATGACAGTCTGACAGC...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGATGTTCTCTTTTCTCTaGAACCTTACTGGCATGTTA +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWMFSFL*NLTGML
Trigger: TAACATGCCAGTAAGGTTTCAGAGAAAAGAGAACAT...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGATGTTCTCTTTTCTCTaGAACCTTACTGGCATGTTA +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTMFSFL*NLTGML
Trigger: TAACATGCCAGTAAGGTTTCAGAGAAAAGAGAACAT...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAATATCGAAATTTTCCTaGATCTGCTGGCCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEISKFS*ICWPLK
Trigger: TTTTAGGGGCCAGCAGATGCAGGAAAATTTCGATAT...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATTTCTGCCCAATGCCATaGACAACAAATACAATATGG +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYFCPMP*TTNTIW
Trigger: CCATATTGTATTTGTTGTGCATGGCATTGGGCAGAA...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCCCATTTTCTGCCCAATaGCATGCACAACAAATACAA +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTPFSAQ*HAQQIQ
Trigger: TTGTATTTGTTGTGCATGGCATTGGGCAGAAAATGG...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTAAATTCAACATGTGTTaGATGGTTGGAAAAATGCCT +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCKFNMC*MVGKMP
Trigger: AGGCATTTTTCCAACCATGCAACACATGTTGAATTT...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAAAATTCAACATGTGTTaGATGGTTGGAAAAATGCCT +
Preference number: 4 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSKFNMC*MVGKMP
Trigger: AGGCATTTTTCCAACCATGCAACACATGTTGAATTT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTATACATTATGTCCATTaGACTGCTGTTCAGCATATC +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSIHYVH*TAVQHI
Trigger: GATATGCTGAACAGCAGTGCAATGGACATAATGTAT...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTATACATTATGTCCATTaGACTGCTGTTCAGCATATC +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFIHYVH*TAVQHI
Trigger: GATATGCTGAACAGCAGTGCAATGGACATAATGTAT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGGACAGGTGAAATGTTaGTGTAGTGTTTCAGTATTA +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHGQVKC*CSVSVL
Trigger: TAATACTGAAACACTACAGCAACATTTCACCTGTCC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGGACAGGTGAAATGTTaGTGTAGTGTTTCAGTATTA +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSGQVKC*CSVSVL
Trigger: TAATACTGAAACACTACAGCAACATTTCACCTGTCC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTTTGTAGCCTTTACATaGAGTTTACCCAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSFVAFT*SLPKPS
Trigger: AGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAA...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATTTTGTAGCCTTTACATaGAGTTTACCCAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHFVAFT*SLPKPS
Trigger: AGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAA...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTATTTTTGTCAGTTTTTaGAGAGAAGAGGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSIFVSF*REEGLT
Trigger: AGTGAGACCCTCTTCTCTGCAAAAACTGACAAAAAT...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTATTTTTGTCAGTTTTTaGAGAGAAGAGGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFIFVSF*REEGLT
Trigger: AGTGAGACCCTCTTCTCTGCAAAAACTGACAAAAAT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGAAGATTCCTAAGGCTTaGTTCACATACAAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWKIPKA*FTYKRA
Trigger: TGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTT...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTTCATGGAGTTTGCTaGCTTTCACTTCACTTTTCA +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAFHGVC*LSLHFS
Trigger: TGAAAAGTGAAGTGAAAGGCAGCAAACTCCATGAAA...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTTTCACCCTAACAATCTaGCAATGGACTATTTTTGGG +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSFTLTI*QWTIFG
Trigger: CCCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAA...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGGAAAAGAAAAAGCCTaGCTTCAAAGAGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTGKEKA*LQRVVI
Trigger: AATCACAACTCTTTGAAGGCAGGCTTTTTCTTTTCC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTATTTTCTCCAGAATaGTTAGAACAGCCTAGTCTG +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGALFSPE*LEQPSL
Trigger: CAGACTAGGCTGTTCTAAGCATTCTGGAGAAAATAA...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGTTATTTTCTCCAGAATaGTTAGAACAGCCTAGTCTG +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWLFSPE*LEQPSL
Trigger: CAGACTAGGCTGTTCTAAGCATTCTGGAGAAAATAA...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGCTCATTTCTTGTGTATaGTTCCTTTTCATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWLISCV*FLFMAD
Trigger: ATCTGCCATGAAAAGGAAGCATACACAAGAAATGAG...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCCAATTTCTGTTTTGTTaGAATTGCCTTTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFQFLFC*NCLWGL
Trigger: AAGTCCCCAAAGGCAATTGCAACAAAACAGAAATTG...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCAACCTCTATGAAGTCTaGTACCACTACTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTNLYEV*YHYLML
Trigger: AAGCATCAAGTAGTGGTACCAGACTTCATAGAGGTT...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAAACCTCTATGAAGTCTaGTACCACTACTTGATGCTT +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALENLYEV*YHYLML
Trigger: AAGCATCAAGTAGTGGTACCAGACTTCATAGAGGTT...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGCTTGTCTTCTAATGTaGCTTCTTCTACATAACCTC +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSACLLM*LLLHNL
Trigger: GAGGTTATGTAGAAGAAGCCACATTAGAAGACAAGC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGACAACAAATACAATATaGGTAGTCTGTGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTTTNTI*VVCDGL
Trigger: CAAGCCATCACAGACTACCCATATTGTATTTGTTGT...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCACAACAAATACAATATaGGTAGTCTGTGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFTTNTI*VVCDGL
Trigger: CAAGCCATCACAGACTACCCATATTGTATTTGTTGT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp TCAAGAGAGTTCAGATTGGATCTAAATTGGGTTTTGCATCATCATCGTGCTCATTTCATACAGCCGAACTaGATTCCAGCCAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: SREFRLDLNWVLHHHRAHFIQPN*IPASHY
Trigger: ATAATGACTGGCTGGAATCCAGTTCGGCTGTATGAA...ATGAGCACGATGATGATGCAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGAAATGTACCCATTATaGAGTACTCCGTGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYEMYPL*STPCQV
Trigger: AACTTGACACGGAGTACTCCATAATGGGTACATTTC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGAAATGTACCCATTATaGAGTACTCCGTGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTEMYPL*STPCQV
Trigger: AACTTGACACGGAGTACTCCATAATGGGTACATTTC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAATGCCTTGTGTCTCAATaGCACATTGAGAAACAATGT +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALECLVSQ*HIEKQC
Trigger: ACATTGTTTCTCAATGTGCCATTGAGACACAAGGCA...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCAAGAAGCTAGTACATaGGTTATTGAATGCACTCTT +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSQEAST*VIECTL
Trigger: AAGAGTGCATTCAATAACCCATGTACTAGCTTCTTG...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTGTACACCACTACAAGTaGCTAATTTTTGTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCVHHYK*LIFVSF
Trigger: AAAACTGACAAAAATTAGCCACTTGTAGTGGTGTAC...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGTACACCACTACAAGTaGCTAATTTTTGTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLVHHYK*LIFVSF
Trigger: AAAACTGACAAAAATTAGCCACTTGTAGTGGTGTAC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGCCAATGGACTATTTTTaGGGAATGCACATACATACA +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTPMDYF*GMHIHT
Trigger: TGTATGTATGTGCATTCCCCAAAAATAGTCCATTGG...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCCCAATGGACTATTTTTaGGGAATGCACATACATACA +
Preference number: 4 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFPMDYF*GMHIHT
Trigger: TGTATGTATGTGCATTCCCCAAAAATAGTCCATTGG...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGAATGGGAAGGTGAGTaGAAAGGTAGTAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIEWEGE*KGSRSR
Trigger: CCTACTCCTACTACCTTTCCACTCACCTTCCCATTC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAATCATCAAAGGGCTTTaGTTGTCATCAGACCTATGT +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEIIKGL*LSSDLC
Trigger: ACATAGGTCTGATGACAACCAAAGCCCTTTGATGAT...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACCCCATGTGCCACTaGATTGTGTTTAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSHPMCH*IVFNSH
Trigger: ATGGCTGTTAAACACAATCCAGTGGCACATGGGGTG...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATAGCATCACACAGATGTaGCTTCAAACTATAAGACCA +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYSITQM*LQTIRP
Trigger: TGGTCTTATAGTTTGAAGCCACATCTGTGTGATGCT...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAATTCTAAAATTCAGATaGAACCAAAGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTILKFR*NQRKSL
Trigger: CAGGCTCTTTCTTTGGTTCCATCTGAATTTTAGAAT...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCGAGAACTACAAAACATaGCAGAAAGAAATCAGGGAT +
Preference number: 4 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAENYKT*QKEIRD
Trigger: ATCCCTGATTTCTTTCTGCCATGTTTTGTAGTTCTC...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTGGCAAAATATGGTCTTaGCTTCCAGTATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSGKIWS*LPVFPG
Trigger: CCCAGGAAATACTGGAAGTCAAGACCATATTTTGCC...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAGTGGATCTGGACAGGTaGAATGTTGCTGTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRVDLDR*NVAVVF
Trigger: AAACACTACAGCAACATTTCACCTGTCCAGATCCAC...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTCCACAAGGCCTTCTCTaGGTTCAAAATCAATCCTGT +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASPQGLL*VQNQSC
Trigger: ACAGGATTGATTTTGAACTCAGAGAAGGCCTTGTGG...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACCTAAAAGGTCACATGTaGATCAAGTCATTGAACAGC +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYLKGHM*IKSLNS
Trigger: GCTGTTCAATGACTTGATTCACATGTGACCTTTTAG...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATATGTCTACTGTCTAGGTaGTGCAAAGCTGGAATATGG +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHICLLSR*CKAGIW
Trigger: CCATATTCCAGCTTTGCATCACCTAGACAGTAGACA...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACATCACAAGCATCTACTaGAGACTGAAAGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYITSIY*RLKEKA
Trigger: TGCTTTCTCTTTCAGTCTTCAGTAGATGCTTGTGAT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCCAGATTAAAGCTTGCTaGTGCTTTAATCTGAGCTTA +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTQIKAC*CFNLSL
Trigger: TAAGCTCAGATTAAAGCATCAGCAAGCTTTAATCTG...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTAGTCAAGGGAAGGTATaGGTGACGCTCCTAGATATT +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVISQGKV*VTLLDI
Trigger: AATATCTAGGAGCGTCACTCATACCTTCCCTTGACT...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TCAAGAGAGTTCAGATTGGATCTAAATTGGGTTTTGCATCATCATCGTGCTCATTTATGTCCATTGCACTaGTGTTCAGCATATCCCTTA +
Preference number: 4 (lower is better)
Translates to: SREFRLDLNWVLHHHRAHLCPLH*CSAYPL
Trigger: TAAGGGATATGCTGAACAGCAGTGCAATGGACATAA...ATGAGCACGATGATGATGCAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR GCA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTTTGCATCATCATCGTaGTCATGTTTATACATGAAG +
Preference number: 4 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSFASSS*SCLYMK
Trigger: CTTCATGTATAAACATGAGCACGATGATGATGCAAA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTTTGCATCATCATCGTaGTCATGTTTATACATGAAG +
Preference number: 4 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSFASSS*SCLYMK
Trigger: CTTCATGTATAAACATGAGCACGATGATGATGCAAA...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGTTTGCATCATCATCGTaGTCATGTTTATACATGAAG +
Preference number: 4 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTFASSS*SCLYMK
Trigger: CTTCATGTATAAACATGAGCACGATGATGATGCAAA...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTTTCACATCCAGGTCTTaGTTGATTCTCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASFTSRS*LILWRR
Trigger: CCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAA...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATTTTGTAGCCTTTACATaGAGTTTACCCAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYFVAFT*SLPKPS
Trigger: AGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAA...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATCATCCAATGTTAACATaGACAGACATAGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYHPMLT*TDIETR
Trigger: CCTTGTTTCTATGTCTGTGCATGTTAACATTGGATG...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGGCCGATTTAGTACTTaGTGGAATAAAGTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTGRFST*WNKVAK
Trigger: TTTTGCAACTTTATTCCAGCAAGTACTAAATCGGCC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTAAGAGAGGCAGTTTCTaGCCTTTAGGAGTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVIKRGSF*PLGVVS
Trigger: GGAAACTACTCCTAAAGGGCAGAAACTGCCTCTCTT...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAAGAGAGGCAGTTTCTaGCCTTTAGGAGTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASKRGSF*PLGVVS
Trigger: GGAAACTACTCCTAAAGGGCAGAAACTGCCTCTCTT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTTCAGGAGAGTTATGGTaGCAGCTGCTTCTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASSGELW*QLLLRN
Trigger: ATTTCTCAGAAGCAGCTGGCACCATAACTCTCCTGA...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGGAAAAGAAAAAGCCTaGCTTCAAAGAGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYGKEKA*LQRVVI
Trigger: AATCACAACTCTTTGAAGGCAGGCTTTTTCTTTTCC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTACCACCTCACGGAATTaGACTGAAATTCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASTTSRN*TEIPRL
Trigger: CAGTCTAGGAATTTCAGTGCAATTCCGTGAGGTGGT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATCTCATTTCTTGTGTATaGTTCCTTTTCATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VSGEQDNKRINSARETQYLISCV*FLFMAD
Trigger: ATCTGCCATGAAAAGGAAGCATACACAAGAAATGAG...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTCTGGAGGTGATACTTaGTTCAGTTCTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSSGGDT*FSSPGT
Trigger: AGTTCCTGGAGAACTGAAGCAAGTATCACCTCCAGA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGTTGATAGTGTCTTTTaGTGTGCAGAGTGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTVDSVF*CAECFN
Trigger: ATTAAAGCACTCTGCACAGCAAAAGACACTATCAAC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGCCATTTGTTAGAACATaGAGTACTTGGTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWPFVRT*STWFSV
Trigger: AACAGAAAACCAAGTACTGCATGTTCTAACAAATGG...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTCTGTGCCAGTCCACATaGTTTCGACTCAACTTGAAA +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVILCQST*FRLNLK
Trigger: TTTCAAGTTGAGTCGAAACCATGTGGACTGGCACAG...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTGGTAGGTTCTTTAGCTaGGTTGAGAAAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASGRFFS*VEKAWL
Trigger: AAGCCAAGCTTTCTCAACCCAGCTAAAGAACCTACC...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATAGATTGGATCTAAATTaGGTTTTGCATCATCATCGT +
Preference number: 4 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHRLDLN*VLHHHR
Trigger: ACGATGATGATGCAAAACCCAATTTAGATCCAATCT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGAGATTGGATCTAAATTaGGTTTTGCATCATCATCGT +
Preference number: 4 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWRLDLN*VLHHHR
Trigger: ACGATGATGATGCAAAACCCAATTTAGATCCAATCT...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTAGATTGGATCTAAATTaGGTTTTGCATCATCATCGT +
Preference number: 4 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFRLDLN*VLHHHR
Trigger: ACGATGATGATGCAAAACCCAATTTAGATCCAATCT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTGCCTTGTGTCTCAATaGCACATTGAGAAACAATGT +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYCLVSQ*HIEKQC
Trigger: ACATTGTTTCTCAATGTGCCATTGAGACACAAGGCA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGAGAACTACAAAACATaGCAGAAAGAAATCAGGGAT +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEENYKT*QKEIRD
Trigger: ATCCCTGATTTCTTTCTGCCATGTTTTGTAGTTCTC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAATTCCTTCTGAGAACTaGAATAAGAAGAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPIPSEN*NKKRMP
Trigger: GGGCATCCTCTTCTTATTCCAGTTCTCAGAAGGAAT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACCACAGACATCATACTaGATGAGCAAAAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIPQTSY*MSKSWN
Trigger: GTTCCAGCTTTTGCTCATCCAGTATGATGTCTGTGG...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCCACAGACATCATACTaGATGAGCAAAAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSPQTSY*MSKSWN
Trigger: GTTCCAGCTTTTGCTCATCCAGTATGATGTCTGTGG...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTCTAACTGGTGTGAGATaGTATCTTATTGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSLTGVR*YLIVVL
Trigger: CAAAACCACAATAAGATACCATCTCACACCAGTTAG...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTAATTTGCTTAGATTATaGCTTCCAGCTGTATCCATG +
Preference number: 4 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSNLLRL*LPAVSM
Trigger: CATGGATACAGCTGGAAGCCATAATCTAAGCAAATT...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp GTGGTTAAGAATAAATCCCTTCAAGTTCTTATGCATTaGAGTGTCATACCACCTACAGCAACATACGCTCAA +
Preference number: 4 (lower is better)
Translates to: VVKNKSLQVLMH*SVIPPTATYAQ
Trigger: TTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTTATTCTTAACCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp CCCTCAGTTGTCACTGTATTTAGTTTTTCATGGAGTTaGCTGCCTTTCACTTCACTTTTCATGACCTTTACT +
Preference number: 4 (lower is better)
Translates to: PSVVTVFSFSWS*LPFTSLFMTFT
Trigger: AGTAAAGGTCATGAAAAGTGAAGTGAAAGGCAGCAAACTCCATGAAAAACTAAATACAGTGACAACTGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp GTTAGAACATGCAGTACTTGGTTTTCTGTTCTTAATTaGCTTAGATTATGGCTTCCAGCTGTATCCATGTGG +
Preference number: 4 (lower is better)
Translates to: VRTCSTWFSVLN*LRLWLPAVSMW
Trigger: CCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTACTGCATGTTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GTGAAATGTTGCTGTAGTGTTTCAGTATTAATGGTTCTAATCTATAAGCCACTGTCTGGTACCACTACTTaGTGCTTTAGAAAATCCCAG +
Preference number: 4 (lower is better)
Translates to: VKCCCSVSVLMVLIYKPLSGTTT*CFRKSQ
Trigger: CTGGGATTTTCTAAAGCATCAAGTAGTGGTACCAGA...CAGTGGCTTATAGATTAGAACCATTAATACTGAAACACTACAGCAACATTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTGATAGGGTACTCTTATaGGAGTCTGGAAGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVIDRVLL*ESGRKK
Trigger: CTTCTTTCTTCCAGACTCTCATAAGAGTACCCTATC...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTGTGTACTTTATCCTCTaGTGTTCTAGAGGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASVYFIL*CSRGSC
Trigger: ACAACTCCCTCTAGAACATCAGAGGATAAAGTACAC...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAATATCGAAATTTTCCTaGATCTGCTGGCCCCTAAAA +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPISKFS*ICWPLK
Trigger: TTTTAGGGGCCAGCAGATGCAGGAAAATTTCGATAT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCAAATTCAACATGTGTTaGATGGTTGGAAAAATGCCT +
Preference number: 4 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTKFNMC*MVGKMP
Trigger: AGGCATTTTTCCAACCATGCAACACATGTTGAATTT...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR GCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGATTATGTCCATTGCACTaGTGTTCAGCATATCCCTTA +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRLCPLH*CSAYPL
Trigger: TAAGGGATATGCTGAACAGCAGTGCAATGGACATAA...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACATACATTATGTCCATTaGACTGCTGTTCAGCATATC +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYIHYVH*TAVQHI
Trigger: GATATGCTGAACAGCAGTGCAATGGACATAATGTAT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAGAAAACCCTTCCAATaGCTCAGAATCCTGACTTAC +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASRKPFQ*LRILTY
Trigger: GTAAGTCAGGATTCTGAGGCATTGGAAGGGTTTTCT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACATTTTTGTCAGTTTTTaGAGAGAAGAGGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYIFVSF*REEGLT
Trigger: AGTGAGACCCTCTTCTCTGCAAAAACTGACAAAAAT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACCATCCAATGTTAACATaGACAGACATAGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYHPMLT*TDIETR
Trigger: CCTTGTTTCTATGTCTGTGCATGTTAACATTGGATG...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACGGAAAAGAAAAAGCCTaGCTTCAAAGAGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYGKEKA*LQRVVI
Trigger: AATCACAACTCTTTGAAGGCAGGCTTTTTCTTTTCC...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACCTCATTTCTTGTGTATaGTTCCTTTTCATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYLISCV*FLFMAD
Trigger: ATCTGCCATGAAAAGGAAGCATACACAAGAAATGAG...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTCCAGTTTCATTCTTCTaGATAGGGCTAGCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVIPVSFF*IGLASY
Trigger: ATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGG...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATATTCATACAGCCGAACTaGATTCCAGCCAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIFIQPN*IPASHY
Trigger: ATAATGACTGGCTGGAATCCAGTTCGGCTGTATGAA...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTTTCATACAGCCGAACTaGATTCCAGCCAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASFIQPN*IPASHY
Trigger: ATAATGACTGGCTGGAATCCAGTTCGGCTGTATGAA...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGAAGTATTGTACCAGTaGATCTGGACAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIEVLYQ*IWTGEM
Trigger: CATTTCACCTGTCCAGATCCACTGGTACAATACTTC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACCAAGAAGCTAGTACATaGGTTATTGAATGCACTCTT +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYQEAST*VIECTL
Trigger: AAGAGTGCATTCAATAACCCATGTACTAGCTTCTTG...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAAGTGAGTCACATACTTaGTCATGGAGCCTTGGAATT +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRSESHT*SWSLGI
Trigger: AATTCCAAGGCTCCATGACCAAGTATGTGACTCACT...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAATGAGCTGCCACACCTaGCCAAAATCCAGTATATTT +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIMSCHT*PKSSIF
Trigger: AAATATACTGGATTTTGGCCAGGTGTGGCAGCTCAT...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTGTGATTGTATAGGGTaGAATCGGTCACTTACAAAA +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYCDCIG*NRSLTK
Trigger: TTTTGTAAGTGACCGATTCCACCCTATACAATCACA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTCTGACTGTCATTCATTaGCCATGTGATTGTATAGGG +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASLTVIH*PCDCIG
Trigger: CCCTATACAATCACATGGCCAATGAATGACAGTCAG...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTGACTGTCATTCATTaGCCATGTGATTGTATAGGG +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHILTVIH*PCDCIG
Trigger: CCCTATACAATCACATGGCCAATGAATGACAGTCAG...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATATTAGGGGAAACAGTCTaGTATAAGACATGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHILGETV*YKTWLG
Trigger: TCCCAACCATGTCTTATACCAGACTGTTTCCCCTAA...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATATCTTACTGGCAAAGTTaGGATTATGGCAGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHISYWQS*DYGSLR
Trigger: TCTAAGGCTGCCATAATCCCAACTTTGCCAGTAAGA...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTATGCTTCCTTTTCATaGCAGATGCACATAATCCAT +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYYASFS*QMHIIH
Trigger: ATGGATTATGTGCATCTGCCATGAAAAGGAAGCATA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTTTCTCCAGGAACTCTTaGCTCATTTCTTGTGTATGC +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASFSRNS*LISCVC
Trigger: GCATACACAAGAAATGAGCCAAGAGTTCCTGGAGAA...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTGATACAAGCAAGCAATaGGGAAAGGAACACGTTGTT +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVIDTSKQ*GKEHVV
Trigger: AACAACGTGTTCCTTTCCCCATTGCTTGCTTGTATC...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAAGACACGTAGACCAATaGAACACAATAGAGAACACA +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRRHVDQ*NTIENT
Trigger: TGTGTTCTCTATTGTGTTCCATTGGTCTACGTGTCT...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAATTCTAAAATTCAGATaGAACCAAAGAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FYSKGFLVSHILGHGALEILKFR*NQRKSL
Trigger: CAGGCTCTTTCTTTGGTTCCATCTGAATTTTAGAAT...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTTGTTGCAATTGCCTTTaGGGACTTAGCCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVICCNCL*GLSQKF
Trigger: GAACTTTTGGCTAAGTCCCCAAAGGCAATTGCAACA...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp CTTTGCATCCTGAGGTACTCAATATTTAGCTCCCATTaGTTAGAACATGCAGTACTTGGTTTTCTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: LCILRYSIFSSH*LEHAVLGFLFL
Trigger: TAAGAACAGAAAACCAAGTACTGCATGTTCTAACAAATGGGAGCTAAATATTGAGTACCTCAGGATGCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
3UTR CAA 72 bp TTCATGTCCTTCAAGAGAGTTCAGATTGGATCTAAATaGGGTTTTGCATCATCATCGTGCTCATGTTTATAC +
Preference number: 4 (lower is better)
Translates to: FMSFKRVQIGSK*GFASSSCSCLY
Trigger: GTATAAACATGAGCACGATGATGATGCAAAACCCAATTTAGATCCAATCTGAACTCTCTTGAAGGACATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTGTTTGTGTCATAGATaGTGCTTTCAATCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSCLCHR*CFQSVK
Trigger: CTTCACGGATTGAAAGCATCATCTATGACACAAACA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTGAAATCTCCGTATCTTaGCACACACATTTTAACGGA +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASEISVS*HTHFNG
Trigger: TCCGTTAAAATGTGTGTGTCAAGATACGGAGATTTC...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGAAATCTCCGTATCTTaGCACACACATTTTAACGGA +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIEISVS*HTHFNG
Trigger: TCCGTTAAAATGTGTGTGTCAAGATACGGAGATTTC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAGGTTTCGACTCAACTTaGAACTATGAACAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRGFDST*NYEQQN
Trigger: ATTCTGCTGTTCATAGTTTCAAGTTGAGTCGAAACC...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395606.5
CDS-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTATCACAAGCATCTACTaGAGACTGAAAGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSITSIY*RLKEKA
Trigger: TGCTTTCTCTTTCAGTCTTCAGTAGATGCTTGTGAT...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGACAGATTAAAGCTTGCTaGTGCTTTAATCTGAGCTTA +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRQIKAC*CFNLSL
Trigger: TAAGCTCAGATTAAAGCATCAGCAAGCTTTAATCTG...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTGGCTGCAAAGGACATaGTTTTGTTCTTTTTATGGC +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSWLQRT*FCSFYG
Trigger: GCCATAAAAAGAACAAAATCATGTCCTTTGCAGCCA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATATTCTGCCCAATGCCATaGACAACAAATACAATATGG +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIFCPMP*TTNTIW
Trigger: CCATATTGTATTTGTTGTGCATGGCATTGGGCAGAA...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTTTCTGCCCAATGCCATaGACAACAAATACAATATGG +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASFCPMP*TTNTIW
Trigger: CCATATTGTATTTGTTGTGCATGGCATTGGGCAGAA...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACAAATTCAACATGTGTTaGATGGTTGGAAAAATGCCT +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYKFNMC*MVGKMP
Trigger: AGGCATTTTTCCAACCATGCAACACATGTTGAATTT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAATACATTATGTCCATTaGACTGCTGTTCAGCATATC +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPIHYVH*TAVQHI
Trigger: GATATGCTGAACAGCAGTGCAATGGACATAATGTAT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAAAGATTCCTAAGGCTTaGTTCACATACAAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPKIPKA*FTYKRA
Trigger: TGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTTCACCCTAACAATCTaGCAATGGACTATTTTTGGG +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSFTLTI*QWTIFG
Trigger: CCCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTTGAAGTCTGAAATATaGAGAATCGAGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSLKSEI*RIEEAR
Trigger: TCTGGCTTCCTCGATTCTGCATATTTCAGACTTCAA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTTTGAAGTCTGAAATATaGAGAATCGAGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVILKSEI*RIEEAR
Trigger: TCTGGCTTCCTCGATTCTGCATATTTCAGACTTCAA...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAGCTTGTCTTCTAATGTaGCTTCTTCTACATAACCTC +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRACLLM*LLLHNL
Trigger: GAGGTTATGTAGAAGAAGCCACATTAGAAGACAAGC...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAACAACAAATACAATATaGGTAGTCTGTGATGGCTTG +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRTTNTI*VVCDGL
Trigger: CAAGCCATCACAGACTACCCATATTGTATTTGTTGT...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTGGGTTGAGAAAGCTTaGCTTCATATGTTCATAAGG +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSWVEKA*LHMFIR
Trigger: CCTTATGAACATATGAAGCCAAGCTTTCTCAACCCA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACAGATTGGATCTAAATTaGGTTTTGCATCATCATCGT +
Preference number: 4 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYRLDLN*VLHHHR
Trigger: ACGATGATGATGCAAAACCCAATTTAGATCCAATCT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTCTTGCTTGATTCTCTaGAGAAGGTTTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSSCLIL*RRFCQT
Trigger: AGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGATCTTGCTTGATTCTCTaGAGAAGGTTTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRSCLIL*RRFCQT
Trigger: AGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGA...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGAAATGTACCCATTATaGAGTACTCCGTGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIEMYPL*STPCQV
Trigger: AACTTGACACGGAGTACTCCATAATGGGTACATTTC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCTAACAATCTGCCAATaGACTATTTTTGGGGAATGC +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSLTICQ*TIFGEC
Trigger: GCATTCCCCAAAAATAGTCCATTGGCAGATTGTTAG...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATATGCTTCCTTTTCATaGCAGATGCACATAATCCAT +
Preference number: 4 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPYASFS*QMHIIH
Trigger: ATGGATTATGTGCATCTGCCATGAAAAGGAAGCATA...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGATATGCTTCCTTTTCATaGCAGATGCACATAATCCAT +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRYASFS*QMHIIH
Trigger: ATGGATTATGTGCATCTGCCATGAAAAGGAAGCATA...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAGCATCACACAGATGTaGCTTCAAACTATAAGACCA +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASSITQM*LQTIRP
Trigger: TGGTCTTATAGTTTGAAGCCACATCTGTGTGATGCT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAAGCATCACACAGATGTaGCTTCAAACTATAAGACCA +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHISITQM*LQTIRP
Trigger: TGGTCTTATAGTTTGAAGCCACATCTGTGTGATGCT...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTCTAACTAAAGTTCAGTaGTCTAATCAGTACTTGGGA +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVILTKVQ*SNQYLG
Trigger: TCCCAAGTACTGATTAGATCACTGAACTTTAGTTAG...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAGAAGCATGTTCAGTGTaGGTACTTCAAAAGATAACA +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHREACSV*VLQKIT
Trigger: TGTTATCTTTTGAAGTACTCACACTGAACATGCTTC...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR TCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTATGTTCTCTTTTCTCTaGAACCTTACTGGCATGTTA +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASMFSFL*NLTGML
Trigger: TAACATGCCAGTAAGGTTTCAGAGAAAAGAGAACAT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAAAATTCAACATGTGTTaGATGGTTGGAAAAATGCCT +
Preference number: 4 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRKFNMC*MVGKMP
Trigger: AGGCATTTTTCCAACCATGCAACACATGTTGAATTT...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTGGACAGGTGAAATGTTaGTGTAGTGTTTCAGTATTA +
Preference number: 4 (lower is better)
Translates to: STCWNKVAKCYSVTDLASGQVKC*CSVSVL
Trigger: TAATACTGAAACACTACAGCAACATTTCACCTGTCC...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GTGAAATGTTGCTGTAGTGTTTCAGTATTAATGGTTCTAATCTATAAGCCACTGTTTGTAGCCTTTACATaGAGTTTACCCAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: VKCCCSVSVLMVLIYKPLFVAFT*SLPKPS
Trigger: AGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAA...CAGTGGCTTATAGATTAGAACCATTAATACTGAAACACTACAGCAACATTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR GCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAATTTTTGTCAGTTTTTaGAGAGAAGAGGGTCTCACT +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRIFVSF*REEGLT
Trigger: AGTGAGACCCTCTTCTCTGCAAAAACTGACAAAAAT...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGATTTCATGGAGTTTGCTaGCTTTCACTTCACTTTTCA +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRFHGVC*LSLHFS
Trigger: TGAAAAGTGAAGTGAAAGGCAGCAAACTCCATGAAA...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTTTTCATGGAGTTTGCTaGCTTTCACTTCACTTTTCA +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVIFHGVC*LSLHFS
Trigger: TGAAAAGTGAAGTGAAAGGCAGCAAACTCCATGAAA...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGATTATTTTCTCCAGAATaGTTAGAACAGCCTAGTCTG +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRLFSPE*LEQPSL
Trigger: CAGACTAGGCTGTTCTAAGCATTCTGGAGAAAATAA...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGACAATTTCTGTTTTGTTaGAATTGCCTTTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRQFLFC*NCLWGL
Trigger: AAGTCCCCAAAGGCAATTGCAACAAAACAGAAATTG...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGTTGATAGTGTCTTTTaGTGTGCAGAGTGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIVDSVF*CAECFN
Trigger: ATTAAAGCACTCTGCACAGCAAAAGACACTATCAAC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTGTGATTGTATAGGGTaGAATCGGTCACTTACAAAA +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSCDCIG*NRSLTK
Trigger: TTTTGTAAGTGACCGATTCCACCCTATACAATCACA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTAAATTCAACATGTGTTaGATGGTTGGAAAAATGCCT +
Preference number: 4 (lower is better)
Translates to: EVKRKIPKACFTYKRAVIKFNMC*MVGKMP
Trigger: AGGCATTTTTCCAACCATGCAACACATGTTGAATTT...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATATTTGCATCATCATCGTaGTCATGTTTATACATGAAG +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIFASSS*SCLYMK
Trigger: CTTCATGTATAAACATGAGCACGATGATGATGCAAA...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR GCA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACCATTTGTTAGAACATaGAGTACTTGGTTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIPFVRT*STWFSV
Trigger: AACAGAAAACCAAGTACTGCATGTTCTAACAAATGG...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CCA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTAGATTGGATCTAAATTaGGTTTTGCATCATCATCGT +
Preference number: 4 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSRLDLN*VLHHHR
Trigger: ACGATGATGATGCAAAACCCAATTTAGATCCAATCT...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS GCA 90 bp AGGGCCAGGGGCACGTCGCCGTCGTCCGGGTCCCCGCCGGGCAGGTaGTCGAAGCAGCAGACGCCGCCGCCGAACGCTGGCCTCGCGTCT +
Preference number: 5 (lower is better)
Translates to: RARGTSPSSGSPPGR*SKQQTPPPNAGLAS
Trigger: AGACGCGAGGCCAGCGTTCGGCGGCGGCGTCTGCTGCTTCGAGCACCTGCCCGGCGGGGACCCGGACGACGGCGACGTGCCCCTGGCCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS CCA 90 bp CCAGGCGCCGCCGCCGCCGCCTCGGCCGTTATGCTCGGGGCTCCGTaGGGACCCGCGGCCCGGGTAATTCATGCTGTGGAGACGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PGAAAAASAVMLGAP*GPAARVIHAVETPP
Trigger: CGGCGGCGTCTCCACAGCATGAATTACCCGGGCCGCGGGTCCCCACGGAGCCCCGAGCATAACGGCCGAGGCGGCGGCGGCGGCGCCTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS TCA 90 bp GTGCTCGAAGCAGCAGACGCCGCCGCCGAACGCTGGCCTCGCGTCTaGGCCCAGCTCCCAGGCGCCGCCGCCGCCGCCTCGGCCGTTATG +
Preference number: 5 (lower is better)
Translates to: VLEAADAAAERWPRV*AQLPGAAAAASAVM
Trigger: CATAACGGCCGAGGCGGCGGCGGCGGCGCCTGGGAGCTGGGCTCAGACGCGAGGCCAGCGTTCGGCGGCGGCGTCTGCTGCTTCGAGCAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS TCA 90 bp CATGCTGTGGAGACGCCGCCGGCTGTCCGGCGGCGCGCGGAGCCGTaGCCCCCAGCGCTTCCGCCACACATTCAACGCCGCCGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: HAVETPPAVRRRAEP*PPALPPHIQRRRPL
Trigger: GAGAGGGCGGCGGCGTTGAATGTGTGGCGGAAGCGCTGGGGGTCACGGCTCCGCGCGCCGCCGGACAGCCGGCGGCGTCTCCACAGCATG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS GCA 90 bp CGTTATGCTCGGGGCTCCGTGGGGACCCGCGGCCCGGGTAATTCATaGTGTGGAGACGCCGCCGGCTGTCCGGCGGCGCGCGGAGCCGTG +
Preference number: 5 (lower is better)
Translates to: RYARGSVGTRGPGNS*CGDAAGCPAARGAV
Trigger: CACGGCTCCGCGCGCCGCCGGACAGCCGGCGGCGTCTCCACAGCATGAATTACCCGGGCCGCGGGTCCCCACGGAGCCCCGAGCATAACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS GCA 90 bp TCCAGCGCGAGGTGGTGGTTGTGGTCGTCGGTGCCCGGCGCCAAATaGAGCCCGGGTTCCCCGCGCAGCAGGGCCAGGGGCACGTCGCCG +
Preference number: 5 (lower is better)
Translates to: SSARWWLWSSVPGAK*SPGSPRSRARGTSP
Trigger: CGGCGACGTGCCCCTGGCCCTGCTGCGCGGGGAACCCGGGCTGCATTTGGCGCCGGGCACCGACGACCACAACCACCACCTCGCGCTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS GCA 90 bp TCGGGACCAGCGGAGGCTGCTGCGGCGGGTGCAGCGACAAGGAGCTaGCGCCGCCGCCGCTCTCACCCTCGCTGTAGTAGCGCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: SGPAEAAAAGAATRS*RRRRSHPRCSSAAR
Trigger: CCTCGCTGCGCTACTACAGCGAGGGTGAGAGCGGCGGCGGCGGCAGCTCCTTGTCGCTGCACCCGCCGCAGCAGCCTCCGCTGGTCCCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS CCA 90 bp GCCGCAGGCGCGGTCCTCATCGTCATCTTCTCCGGAACTGGAGGCTaGGCCCGTGGGGGAGCACACATGGTCGCCGTCCCGGTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: AAGAVLIVIFSGTGG*ARGGAHMVAVPVPA
Trigger: GGCGGGGACCGGGACGGCGACCATGTGTGCTCCCCCACGGGCCCAGCCTCCAGTTCCGGAGAAGATGACGATGAGGACCGCGCCTGCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
ENST00000673930.1
CDS GCA 90 bp CCCTCTCCACCCGAAGTTTCTAATCTTTCAAATCCCGACCCGAGCTaGGGCGGCAGCGGCGACCGCTCCGCCCCCACGAGACCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: PSPPEVSNLSNPDPS*GGSGDRSAPTRPAA
Trigger: GGCTGCGGGTCTCGTGGGGGCGGAGCGGTCGCCGCTGCCGCCGCAGCTCGGGTCGGGATTTGAAAGATTAGAAACTTCGGGTGGAGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357758.3
ENST00000673822.2
CDS GCA 90 bp ACGCACACAGGCTCGATGTTCACAAGCTCCACCATCTCCGGCTCGTaGCCCGTCGTACTCTGGCAGAAGCCGCAGGCGCGGTCCTCATCG +
Preference number: 5 (lower is better)
Translates to: THTGSMFTSSTISGS*PVVLWQKPQARSSS
Trigger: CGATGAGGACCGCGCCTGCGGCTTCTGCCAGAGTACGACGGGGCACGAGCCGGAGATGGTGGAGCTTGTGAACATCGAGCCTGTGTGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
ENST00000673930.1
CDS CCA 90 bp ATGTTCACAAGCTCCACCATCTCCGGCTCGTGCCCCGTCGTACTCTaGCAGAAGCCGCAGGCGCGGTCCTCATCGTCATCTTCTCCGGAA +
Preference number: 5 (lower is better)
Translates to: MFTSSTISGSCPVVL*QKPQARSSSSSSPE
Trigger: TTCCGGAGAAGATGACGATGAGGACCGCGCCTGCGGCTTCTGCCAGAGTACGACGGGGCACGAGCCGGAGATGGTGGAGCTTGTGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
ENST00000673930.1
CDS TCA 90 bp GCAGGGTCCGGAAGGCGAGCTCGATGCGGAGCGAGTCGTAGCCGATaGAGGGCTTCCAGGTCTTCTTGTCCTCCTTGTAGAACCAGCGTA +
Preference number: 5 (lower is better)
Translates to: AGSGRRARCGASRSR*RASRSSCPPCRTSV
Trigger: TACGCTGGTTCTACAAGGAGGACAAGAAGACCTGGAAGCCCTTCATCGGCTACGACTCGCTCCGCATCGAGCTCGCCTTCCGGACCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
ENST00000673930.1
CDS-3UTR CAA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATCAGCCTAGTCTGAGGTaGCTCACTGTAGGGCACAAC +
Preference number: 5 (lower is better)
Translates to: ELWPLAFLVERNVAATADQPSLR*LTVGHN
Trigger: GTTGTGCCCTACAGTGAGCAACCTCAGACTAGGCTG...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAGAGCTCACTGCAGCTTaGAACTTCTGGGCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: WPRISHLRSAPPHGIALKELTAA*NFWARV
Trigger: CACCCGAGCCCAGAAGTTCAAAGCTGCAGTGAGCTC...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCAGTAATCTTCCCTGCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPSNLPC*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGCAGGGAAGATTACT...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATTGGTATAAGACATGGTaGGGAATCAGGGGACTAGGT +
Preference number: 5 (lower is better)
Translates to: ELWPLAFLVERNVAATADWYKTW*GIRGLG
Trigger: ACCTAGTCCCCTGATTCCCAACCATGTCTTATACCA...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGCGGGTAGCACTCTCCTaGGGTCACATCCACCTCGTA +
Preference number: 5 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLRVALS*GHIHLV
Trigger: TACGAGGTGGATGTGACCCAAGGAGAGTGCTACCCG...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GGTCTTGACTTCCAGTATTTCCTGGGCGGATGCCACGCAACGCCAAGAAAACTGGGTTCTTTAGCTGGGTaGAGAAAGCTTGGCTTCATA +
Preference number: 5 (lower is better)
Translates to: GLDFQYFLGGCHATPRKLGSLAG*RKLGFI
Trigger: TATGAAGCCAAGCTTTCTCAACCCAGCTAAAGAACC...CAGTTTTCTTGGCGTTGCGTGGCATCCGCCCAGGAAATACTGGAAGTCAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTGAGCTCACTGCAGCTTaGAACTTCTGGGCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCELTAA*NFWARV
Trigger: CACCCGAGCCCAGAAGTTCAAAGCTGCAGTGAGCTC...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGCAGCCTAGTCTGAGGTaGCTCACTGTAGGGCACAAC +
Preference number: 5 (lower is better)
Translates to: IAKATQSRKNKASSITQMQPSLR*LTVGHN
Trigger: GTTGTGCCCTACAGTGAGCAACCTCAGACTAGGCTG...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCGGGTAGCACTCTCCTaGGGTCACATCCACCTCGTA +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSRVALS*GHIHLV
Trigger: TACGAGGTGGATGTGACCCAAGGAGAGTGCTACCCG...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATCGGGTAGCACTCTCCTaGGGTCACATCCACCTCGTA +
Preference number: 5 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHRVALS*GHIHLV
Trigger: TACGAGGTGGATGTGACCCAAGGAGAGTGCTACCCG...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCGGGTAGCACTCTCCTaGGGTCACATCCACCTCGTA +
Preference number: 5 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSRVALS*GHIHLV
Trigger: TACGAGGTGGATGTGACCCAAGGAGAGTGCTACCCG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp ATCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCGAAACTATGAACAGCTaGGGAATGCTTTCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: IEEARTAMWKGLCPYGGSETMNS*GMLSFK
Trigger: CTTAAACGAAAGCATTCCCAAGCTGTTCATAGTTTC...GCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATCAACTCTTCTTCCTTTaGCAGCAACTGTTCATACAG +
Preference number: 5 (lower is better)
Translates to: ELWPLAFLVERNVAATADQLFFL*QQLFIQ
Trigger: CTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTTG...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATAGGCAAAATATGGTCTaGACTTCCAGTATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: ELWPLAFLVERNVAATADRQNMV*TSSISW
Trigger: CCAGGAAATACTGGAAGTCAAGACCATATTTTGCCT...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCAGAAGGTAGGCAAAATATGGTCTaGACTTCCAGTATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: KPELLCGRVCVPTVVAEGRQNMV*TSSISW
Trigger: CCAGGAAATACTGGAAGTCAAGACCATATTTTGCCT...ACCTTCTGCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGAGCTCACTGCAGCTTaGAACTTCTGGGCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTELTAA*NFWARV
Trigger: CACCCGAGCCCAGAAGTTCAAAGCTGCAGTGAGCTC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGAGCTCACTGCAGCTTaGAACTTCTGGGCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSELTAA*NFWARV
Trigger: CACCCGAGCCCAGAAGTTCAAAGCTGCAGTGAGCTC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATTGGCTCACTGAAGCCTaGACCTCCCGGAATCATGCA +
Preference number: 5 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYWLTEA*TSRNHA
Trigger: TGCATGATTCCGGGAGGTCAAGGCTTCAGTGAGCCA...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGGAAAGGGTGGAGTTTaGCCATGGATGGCTCCATCC +
Preference number: 5 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLGKGGV*PWMAPS
Trigger: GGATGGAGCCATCCATGGCAAAACTCCACCCTTTCC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATGGAAAGGGTGGAGTTTaGCCATGGATGGCTCCATCC +
Preference number: 5 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYGKGGV*PWMAPS
Trigger: GGATGGAGCCATCCATGGCAAAACTCCACCCTTTCC...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TCCTCTGATGTTCTAGAGGGAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAACTGTTGTTCCCACCTTaGCATCCTGAGGTACTCAAT +
Preference number: 5 (lower is better)
Translates to: SSDVLEGVVATSLPSRTELLFPP*HPEVLN
Trigger: ATTGAGTACCTCAGGATGCAAAGGTGGGAACAACAG...TTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTCCCTCTAGAACATCAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCAGTCTGCAGTGTCTGTaGTTCCCACCTTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPSLQCL*FPPLHP
Trigger: AGGATGCAAAGGTGGGAACAACAGACACTGCAGACT...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAACGGGTAGCACTCTCCTaGGGTCACATCCACCTCGTA +
Preference number: 5 (lower is better)
Translates to: FYSKGFLVSHILGHGALERVALS*GHIHLV
Trigger: TACGAGGTGGATGTGACCCAAGGAGAGTGCTACCCG...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGTGAGGTCACAGGGCTaGGTATGGTTGAAATGCCTT +
Preference number: 5 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCVRSQG*VWLKCL
Trigger: AAGGCATTTCAACCATACCAAGCCCTGTGACCTCAC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGCGGATGCCACGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGACAGCCCCTAATATGCTaGCTTTGCCTATATTTGTTA +
Preference number: 5 (lower is better)
Translates to: GGCHATPRKLLMGIPYRRQPLIC*LCLYLL
Trigger: TAACAAATATAGGCAAAGCAAGCATATTAGGGGCTG...TCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCGTGGCATCCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp AAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCAGAAGGTCAGATTGGATCTAAATaGGGTTTTGCATCATCATCG +
Preference number: 5 (lower is better)
Translates to: KPELLCGRVCVPTVVAEGQIGSK*GFASSS
Trigger: CGATGATGATGCAAAACCCAATTTAGATCCAATCTG...ACCTTCTGCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp ATCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGTCCCTACGGTGGTAGCTCAAGAGAGTTCAGATaGGATCTAAATTGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: IEEARTAMWKGLCPYGGSSREFR*DLNWVL
Trigger: CAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA...GCTACCACCGTAGGGACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTTTGCCCAAGCTGGTCTaGAAATCCTGGGCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCLPKLV*KSWAQE
Trigger: CTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCAA...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTGGCTCACTGAAGCCTaGACCTCCCGGAATCATGCA +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAWLTEA*TSRNHA
Trigger: TGCATGATTCCGGGAGGTCAAGGCTTCAGTGAGCCA...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATTTTTTCCTGGGTATTTaGAATCTGAGGCATAAACGG +
Preference number: 5 (lower is better)
Translates to: ELWPLAFLVERNVAATADFFLGI*NLRHKR
Trigger: CCGTTTATGCCTCAGATTCAAAATACCCAGGAAAAA...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAGTTGTGGCCACTAGCCTTCCTAGTAGAACGGAATGTGGCAGCCACAGCTGATTATGTTGGAACAGTTTaGGAGGTGACCTATTTGTCA +
Preference number: 5 (lower is better)
Translates to: ELWPLAFLVERNVAATADYVGTV*EVTYLS
Trigger: TGACAAATAGGTCACCTCCAAAACTGTTCCAACATA...ATCAGCTGTGGCTGCCACATTCCGTTCTACTAGGAAGGCTAGTGGCCACAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCAGCCTAGTCTGAGGTaGCTCACTGTAGGGCACAAC +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSQPSLR*LTVGHN
Trigger: GTTGTGCCCTACAGTGAGCAACCTCAGACTAGGCTG...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAACTGTTGTTCCCACCTTaGCATCCTGAGGTACTCAAT +
Preference number: 5 (lower is better)
Translates to: WPRISHLRSAPPHGIALKLLFPP*HPEVLN
Trigger: ATTGAGTACCTCAGGATGCAAAGGTGGGAACAACAG...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS CCA 90 bp ACCAAGGCGAGAGGATGGCTTGTGCCCAAAAATTTGAGACCAGCCTaGACAACACAAGGAGACTCCGTTTCTTTAGAAAATCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: TKARGWLVPKNLRPA*TTQGDSVSLENPSF
Trigger: AAAACTGGGATTTTCTAAAGAAACGGAGTCTCCTTGTGTTGTCCAGGCTGGTCTCAAATTTTTGGGCACAAGCCATCCTCTCGCCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673827.1
CDS-3UTR CAA 90 bp TCCTTTTGCAGCAACTGTTCATACAGCCGAACTGGATTCCAGCCAGTCATTATGCTTCACATCCAGGTCTaGCTTGATTCTCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SFCSNCSYSRTGFQPVIMLHIQV*LDSLEK
Trigger: CTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAG...CATAATGACTGGCTGGAATCCAGTTCGGCTGTATGAACAGTTGCTGCAAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAACTGACTTACTGTGCCTaGTGTCTCAATGGCACATTG +
Preference number: 5 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKLTYCA*CLNGTL
Trigger: CAATGTGCCATTGAGACACAAGGCACAGTAAGTCAG...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGTTGCCCAAGCTGGTCTaGAAATCCTGGGCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTLPKLV*KSWAQE
Trigger: CTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCAA...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATTTGCCCAAGCTGGTCTaGAAATCCTGGGCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHLPKLV*KSWAQE
Trigger: CTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCAA...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTATTCCTGGCAGAGGCTaGAGGCACAGGAATGACAGC +
Preference number: 5 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSIPGRG*RHRNDS
Trigger: GCTGTCATTCCTGTGCCTCAAGCCTCTGCCAGGAAT...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCTGGTATAAGACATGGTaGGGAATCAGGGGACTAGGT +
Preference number: 5 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCWYKTW*GIRGLG
Trigger: ACCTAGTCCCCTGATTCCCAACCATGTCTTATACCA...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTGGGGAAAGGAACACGTaGTTAATGGGGGCTCACAAG +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSGERNT*LMGAHK
Trigger: CTTGTGAGCCCCCATTAACAACGTGTTCCTTTCCCC...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAAGTCTGCAGTGTCTGTaGTTCCCACCTTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTSLQCL*FPPLHP
Trigger: AGGATGCAAAGGTGGGAACAACAGACACTGCAGACT...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGTGAGGTCACAGGGCTaGGTATGGTTGAAATGCCTT +
Preference number: 5 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSVRSQG*VWLKCL
Trigger: AAGGCATTTCAACCATACCAAGCCCTGTGACCTCAC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp ATGGTTGAAATGCCTTCATTCTCTGAAACTGAGGTAGGTTCTTTAGCTGGGTTGGTGAGGTCACAGGGCTaGGTATGGTTGAAATGCCTT +
Preference number: 5 (lower is better)
Translates to: MVEMPSFSETEVGSLAGLVRSQG*VWLKCL
Trigger: AAGGCATTTCAACCATACCAAGCCCTGTGACCTCAC...CAACCCAGCTAAAGAACCTACCTCAGTTTCAGAGAATGAAGGCATTTCAACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCACTTCACATCCAGGTCTaGCTTGATTCTCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSLHIQV*LDSLEK
Trigger: CTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAG...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCGCCAATGGACTATTTTaGGGGAATGCACATACATAC +
Preference number: 5 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPANGLF*GNAHTY
Trigger: GTATGTATGTGCATTCCCCAAAAATAGTCCATTGGC...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGTAGGGCACAACTACTaGTTTCGGGTGAGCAAGATA +
Preference number: 5 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSVGHNY*FRVSKI
Trigger: TATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTAC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGGGGAAAGGAACACGTaGTTAATGGGGGCTCACAAG +
Preference number: 5 (lower is better)
Translates to: FYSKGFLVSHILGHGALEGERNT*LMGAHK
Trigger: CTTGTGAGCCCCCATTAACAACGTGTTCCTTTCCCC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAATTGCCAATTTCTGTTTaGTTGCAATTGCCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: WPRISHLRSAPPHGIALKLPISV*LQLPLG
Trigger: CCCCAAAGGCAATTGCAACAAAACAGAAATTGGCAA...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCTGGCCCCTAAAACAATaGAGATGTTCTTGCTCAATT +
Preference number: 5 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPWPLKQ*RCSCSI
Trigger: AATTGAGCAAGAACATCTCAATTGTTTTAGGGGCCA...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTGTAGTCTGTGATGGCTaGTCTTCTAATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCVVCDG*SSNVAS
Trigger: AGAAGCCACATTAGAAGACAAGCCATCACAGACTAC...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGTAGTCTGTGATGGCTaGTCTTCTAATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLVVCDG*SSNVAS
Trigger: AGAAGCCACATTAGAAGACAAGCCATCACAGACTAC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TCCTTTTGCAGCAACTGTTCATACAGCCGAACTGGATTCCAGCCAGTCATTATGCAACTCTTCTTCCTTTaGCAGCAACTGTTCATACAG +
Preference number: 5 (lower is better)
Translates to: SFCSNCSYSRTGFQPVIMQLFFL*QQLFIQ
Trigger: CTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTTG...CATAATGACTGGCTGGAATCCAGTTCGGCTGTATGAACAGTTGCTGCAAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCAAAGGATTTGAAGTATaGTACCAGTGGATCTGGACA +
Preference number: 5 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPKGFEV*YQWIWT
Trigger: TGTCCAGATCCACTGGTACAATACTTCAAATCCTTT...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGGTTCTTTAGCTGGGTaGAGAAAGCTTGGCTTCATA +
Preference number: 5 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSGSLAG*RKLGFI
Trigger: TATGAAGCCAAGCTTTCTCAACCCAGCTAAAGAACC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGGTTCTTTAGCTGGGTaGAGAAAGCTTGGCTTCATA +
Preference number: 5 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLGSLAG*RKLGFI
Trigger: TATGAAGCCAAGCTTTCTCAACCCAGCTAAAGAACC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGTGAGGTCACAGGGCTaGGTATGGTTGAAATGCCTT +
Preference number: 5 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTVRSQG*VWLKCL
Trigger: AAGGCATTTCAACCATACCAAGCCCTGTGACCTCAC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGTGAGGTCACAGGGCTaGGTATGGTTGAAATGCCTT +
Preference number: 5 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSVRSQG*VWLKCL
Trigger: AAGGCATTTCAACCATACCAAGCCCTGTGACCTCAC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAACAGCCCCTAATATGCTaGCTTTGCCTATATTTGTTA +
Preference number: 5 (lower is better)
Translates to: WPRISHLRSAPPHGIALKQPLIC*LCLYLL
Trigger: TAACAAATATAGGCAAAGCAAGCATATTAGGGGCTG...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKTSRSC*ILWRRF
Trigger: AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYTSRSC*ILWRRF
Trigger: AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGT...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTCTTCACATCCAGGTCTaGCTTGATTCTCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFLHIQV*LDSLEK
Trigger: CTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAG...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTCTGACTTACTGTGCCTaGTGTCTCAATGGCACATTG +
Preference number: 5 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFLTYCA*CLNGTL
Trigger: CAATGTGCCATTGAGACACAAGGCACAGTAAGTCAG...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCCTGACTTACTGTGCCTaGTGTCTCAATGGCACATTG +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGALTYCA*CLNGTL
Trigger: CAATGTGCCATTGAGACACAAGGCACAGTAAGTCAG...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCAATTTTTGTCAGTTTTaGCAGAGAAGAGGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPNFCQF*QRRGSH
Trigger: GTGAGACCCTCTTCTCTGCAAAAACTGACAAAAATT...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAAAACTTTGCTCCCAGTTaGACAATGATTATTGGGAAG +
Preference number: 5 (lower is better)
Translates to: WPRISHLRSAPPHGIALKNFAPS*TMIIGK
Trigger: CTTCCCAATAATCATTGTCAAACTGGGAGCAAAGTT...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGTGACAGATGGCATCATCAAAGGGCTTTGGTTGTCATCAGACCTATGTGTCCCAACTTTGCTCCCAGTTaGACAATGATTATTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SDRWHHQRALVVIRPMCPNFAPS*TMIIGK
Trigger: CTTCCCAATAATCATTGTCAAACTGGGAGCAAAGTT...GGGACACATAGGTCTGATGACAACCAAAGCCCTTTGATGATGCCATCTGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAAGTAATCTTCCCTGCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPSNLPC*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGCAGGGAAGATTACT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAATTCCTGGCAGAGGCTaGAGGCACAGGAATGACAGC +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRIPGRG*RHRNDS
Trigger: GCTGTCATTCCTGTGCCTCAAGCCTCTGCCAGGAAT...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGGCCAATGGACTATTTTaGGGGAATGCACATACATAC +
Preference number: 5 (lower is better)
Translates to: IAKATQSRKNKASSITQMANGLF*GNAHTY
Trigger: GTATGTATGTGCATTCCCCAAAAATAGTCCATTGGC...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATAGGGAAACAAAAAGTTaGAGAGATCAAGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYRETKS*RDQAGT
Trigger: GGTCCCTGCTTGATCTCTCAAACTTTTTGTTTCCCT...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAAGGGAAACAAAAAGTTaGAGAGATCAAGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSRETKS*RDQAGT
Trigger: GGTCCCTGCTTGATCTCTCAAACTTTTTGTTTCCCT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGTAGGGCACAACTACTaGTTTCGGGTGAGCAAGATA +
Preference number: 5 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWVGHNY*FRVSKI
Trigger: TATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTAC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCACCATGTGCCACTGGATaGTGTTTAACAGCCATAGAA +
Preference number: 5 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSPCATG*CLTAIE
Trigger: TTCTATGGCTGTTAAACACAATCCAGTGGCACATGG...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGTTCTCCAGGAACTCTaGGCTCATTTCTTGTGTATG +
Preference number: 5 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTVLQEL*AHFLCM
Trigger: CATACACAAGAAATGAGCCAAGAGTTCCTGGAGAAC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAATTCCGGAAAAAGAAGTaGTGGGAGATTAAAGAACGA +
Preference number: 5 (lower is better)
Translates to: WPRISHLRSAPPHGIALKFRKKK*WEIKER
Trigger: TCGTTCTTTAATCTCCCACAACTTCTTTTTCCGGAA...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612692.4
ENST00000673822.2
CDS CCA 90 bp CCTTGGTCCATTTTCTGCCCAATGCCATGCACAACAAATACAATATaGGTAGTCTGTGATGGCTTGTCTTCTAATGTGGCTTCTTCTACA +
Preference number: 5 (lower is better)
Translates to: PWSIFCPMPCTTNTI*VVCDGLSSNVASST
Trigger: TGTAGAAGAAGCCACATTAGAAGACAAGCCATCACAGACTACCCATATTGTATTTGTTGTGCATGGCATTGGGCAGAAAATGGACCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000556027.5
ENST00000612692.4
ENST00000673822.2
ENST00000673827.1
ENST00000673930.1
ENST00000674014.1
CDS CCA 90 bp CTGTTGGCCCAAGTAGGAATGTTCAACCCTATTAATAATTCATCCTaGAGTGGAGTTGACTGTGGAAGAATTATTCAGCCTCTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: LLAQVGMFNPINNSS*SGVDCGRIIQPLGV
Trigger: CACTCCTAGAGGCTGAATAATTCTTCCACAGTCAACTCCACTCCAGGATGAATTATTAATAGGGTTGAACATTCCTACTTGGGCCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555400.1
CDS-3UTR CAA 90 bp CGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGAAATTCTCAACCTGGCCCCTAAAACAATaGAGATGTTCTTGCTCAATT +
Preference number: 5 (lower is better)
Translates to: RNAKKTANGDPIQKKFSTWPLKQ*RCSCSI
Trigger: AATTGAGCAAGAACATCTCAATTGTTTTAGGGGCCA...GGTTGAGAATTTCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATTATATCTTCTCCATTaGAACAGAGAAGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSLYLLH*NREGRE
Trigger: CTCCCTCCCTTCTCTGTTCAAATGGAGAAGATATAA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323669.10
ENST00000674014.1
CDS-3UTR CAA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGTAGTCTGTGATGGCTaGTCTTCTAATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTVVCDG*SSNVAS
Trigger: AGAAGCCACATTAGAAGACAAGCCATCACAGACTAC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAACTTAAACCTCGTACTTaGTCAGGAGTAATGGAATCA +
Preference number: 5 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKLKPRT*SGVMES
Trigger: TGATTCCATTACTCCTGACAAAGTACGAGGTTTAAG...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGAAATTCTCAACCCTTAAACCTCGTACTTaGTCAGGAGTAATGGAATCA +
Preference number: 5 (lower is better)
Translates to: RNAKKTANGDPIQKKFSTLKPRT*SGVMES
Trigger: TGATTCCATTACTCCTGACAAAGTACGAGGTTTAAG...GGTTGAGAATTTCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGCAACTCTTCTTCCTTTaGCAGCAACTGTTCATACAG +
Preference number: 5 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLQLFFL*QQLFIQ
Trigger: CTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTTG...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATAGGCAAAATATGGTCTaGACTTCCAGTATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYRQNMV*TSSISW
Trigger: CCAGGAAATACTGGAAGTCAAGACCATATTTTGCCT...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTAGGCAAAATATGGTCTaGACTTCCAGTATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCRQNMV*TSSISW
Trigger: CCAGGAAATACTGGAAGTCAAGACCATATTTTGCCT...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCGGTTCTTTAGCTGGGTaGAGAAAGCTTGGCTTCATA +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAGSLAG*RKLGFI
Trigger: TATGAAGCCAAGCTTTCTCAACCCAGCTAAAGAACC...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGGTTCTTTAGCTGGGTaGAGAAAGCTTGGCTTCATA +
Preference number: 5 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWGSLAG*RKLGFI
Trigger: TATGAAGCCAAGCTTTCTCAACCCAGCTAAAGAACC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCGATCTAAATTGGGTTTaGCATCATCATCGTGCTCAT +
Preference number: 5 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCDLNWV*HHHRAH
Trigger: ATGAGCACGATGATGATGCAAAACCCAATTTAGATC...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFTSRSC*ILWRRF
Trigger: AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATCTTCACATCCAGGTCTaGCTTGATTCTCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: VSGEQDNKRINSARETQYLHIQV*LDSLEK
Trigger: CTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAG...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGGGCACTTTAAATGTTTaGGTGCCTTGGTGTATTAAC +
Preference number: 5 (lower is better)
Translates to: IAKATQSRKNKASSITQMGTLNV*VPWCIN
Trigger: GTTAATACACCAAGGCACCAAAACATTTAAAGTGCC...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATTGCCCAAGCTGGTCTaGAAATCCTGGGCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPLPKLV*KSWAQE
Trigger: CTCTTGAGCCCAGGATTTCAAGACCAGCTTGGGCAA...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAGTAATCTTCCCTGCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: STCWNKVAKCYSVTDLASSNLPC*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGCAGGGAAGATTACT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGTTGGTTTTCAACTCTaGGGCTCAAGTAATCTTCCC +
Preference number: 5 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSVGFQL*GSSNLP
Trigger: GGGAAGATTACTTGAGCCCAAGAGTTGAAAACCAAC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAATTCCTGGCAGAGGCTaGAGGCACAGGAATGACAGC +
Preference number: 5 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIIPGRG*RHRNDS
Trigger: GCTGTCATTCCTGTGCCTCAAGCCTCTGCCAGGAAT...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGAGTTTTTCATGGAGTTaGCTGCCTTTCACTTCACTT +
Preference number: 5 (lower is better)
Translates to: IAKATQSRKNKASSITQMSFSWS*LPFTSL
Trigger: AAGTGAAGTGAAAGGCAGCAAACTCCATGAAAAACT...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATTGGTATAAGACATGGTaGGGAATCAGGGGACTAGGT +
Preference number: 5 (lower is better)
Translates to: VSGEQDNKRINSARETQYWYKTW*GIRGLG
Trigger: ACCTAGTCCCCTGATTCCCAACCATGTCTTATACCA...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGTTTTTCCTGGGTATTTaGAATCTGAGGCATAAACGG +
Preference number: 5 (lower is better)
Translates to: IAKATQSRKNKASSITQMFFLGI*NLRHKR
Trigger: CCGTTTATGCCTCAGATTCAAAATACCCAGGAAAAA...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CTCCAGGAACTCTTGGCTCATTTCTTGTGTATGCTTCCTTTTCATGGCAGATGCTATGTTGGAACAGTTTaGGAGGTGACCTATTTGTCA +
Preference number: 5 (lower is better)
Translates to: LQELLAHFLCMLPFHGRCYVGTV*EVTYLS
Trigger: TGACAAATAGGTCACCTCCAAAACTGTTCCAACATA...GCATCTGCCATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAGTTCCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTAGGGAAACAAAAAGTTaGAGAGATCAAGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFRETKS*RDQAGT
Trigger: GGTCCCTGCTTGATCTCTCAAACTTTTTGTTTCCCT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGTAGGGCACAACTACTaGTTTCGGGTGAGCAAGATA +
Preference number: 5 (lower is better)
Translates to: VSGEQDNKRINSARETQYVGHNY*FRVSKI
Trigger: TATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTAC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGCATCATCAAAGGGCTTaGGTTGTCATCAGACCTATG +
Preference number: 5 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWHHQRA*VVIRPM
Trigger: CATAGGTCTGATGACAACCAAAGCCCTTTGATGATG...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAATTCAAGACATGGAATaGGCTAGGAGAGGATCCAAA +
Preference number: 5 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSIQDME*ARRGSK
Trigger: TTTGGATCCTCTCCTAGCCAATTCCATGTCTTGAAT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTCATGTACTCATCTCTaGACCATGGTACAGACAGTG +
Preference number: 5 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFSCTHL*TMVQTV
Trigger: CACTGTCTGTACCATGGTCAAGAGATGAGTACATGA...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTCATGTACTCATCTCTaGACCATGGTACAGACAGTG +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSSCTHL*TMVQTV
Trigger: CACTGTCTGTACCATGGTCAAGAGATGAGTACATGA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATTCATGTACTCATCTCTaGACCATGGTACAGACAGTG +
Preference number: 5 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHSCTHL*TMVQTV
Trigger: CACTGTCTGTACCATGGTCAAGAGATGAGTACATGA...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGGCCACGTATTTCTCATCTAAGGTCAGCACCACCTCACGGAATTGCACTGAAATTCTGTGCCTATTTCTaGTCTAATCATTGTGGCTTA +
Preference number: 5 (lower is better)
Translates to: WPRISHLRSAPPHGIALKFCAYF*SNHCGL
Trigger: TAAGCCACAATGATTAGACAAGAAATAGGCACAGAA...TTTCAGTGCAATTCCGTGAGGTGGTGCTGACCTTAGATGAGAAATACGTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTGGAAAGGGTGGAGTTTaGCCATGGATGGCTCCATCC +
Preference number: 5 (lower is better)
Translates to: EVKRKIPKACFTYKRAVIGKGGV*PWMAPS
Trigger: GGATGGAGCCATCCATGGCAAAACTCCACCCTTTCC...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAACTCTTGGCTCATTTCTaGTGTATGCTTCCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKLLAHF*CMLPFH
Trigger: ATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAG...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGTTCTCCAGGAACTCTaGGCTCATTTCTTGTGTATG +
Preference number: 5 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSVLQEL*AHFLCM
Trigger: CATACACAAGAAATGAGCCAAGAGTTCCTGGAGAAC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGTTGCCAATTTCTGTTTaGTTGCAATTGCCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKLPISV*LQLPLG
Trigger: CCCCAAAGGCAATTGCAACAAAACAGAAATTGGCAA...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAAAACCCATATGCTGGGTaGAATGGTAGATCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKNPYAG*NGRSVL
Trigger: TAAAACAGATCTACCATTCAACCCAGCATATGGGTT...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp ACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTTGGCCCCTAAAACAATaGAGATGTTCTTGCTCAATT +
Preference number: 5 (lower is better)
Translates to: TQTFFTSRSCLILWRRFCWPLKQ*RCSCSI
Trigger: AATTGAGCAAGAACATCTCAATTGTTTTAGGGGCCA...ACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTTATATCTTCTCCATTaGAACAGAGAAGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSLYLLH*NREGRE
Trigger: CTCCCTCCCTTCTCTGTTCAAATGGAGAAGATATAA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323669.10
ENST00000674014.1
CDS-3UTR CAA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGAGAAAATCCCAGTTTTaGGGTAACTGTTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: IAKATQSRKNKASSITQMRKSQF*GNCSCN
Trigger: ATTGCAAGAACAGTTACCCAAAAACTGGGATTTTCT...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CGCAACGCCAAGAAAACTGCTAATGGGGATCCCATACAGAAGAAATTCTCAACCAGAAAATCCCAGTTTTaGGGTAACTGTTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: RNAKKTANGDPIQKKFSTRKSQF*GNCSCN
Trigger: ATTGCAAGAACAGTTACCCAAAAACTGGGATTTTCT...GGTTGAGAATTTCTTCTGTATGGGATCCCCATTAGCAGTTTTCTTGGCGTTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCGTAGTCTGTGATGGCTaGTCTTCTAATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTVVCDG*SSNVAS
Trigger: AGAAGCCACATTAGAAGACAAGCCATCACAGACTAC...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATGTAGTCTGTGATGGCTaGTCTTCTAATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: VSGEQDNKRINSARETQYVVCDG*SSNVAS
Trigger: AGAAGCCACATTAGAAGACAAGCCATCACAGACTAC...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGCTTAAACCTCGTACTTaGTCAGGAGTAATGGAATCA +
Preference number: 5 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLLKPRT*SGVMES
Trigger: TGATTCCATTACTCCTGACAAAGTACGAGGTTTAAG...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATCAACTCTTCTTCCTTTaGCAGCAACTGTTCATACAG +
Preference number: 5 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHQLFFL*QQLFIQ
Trigger: CTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTTG...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCAGGCAAAATATGGTCTaGACTTCCAGTATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFRQNMV*TSSISW
Trigger: CCAGGAAATACTGGAAGTCAAGACCATATTTTGCCT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATAGGCAAAATATGGTCTaGACTTCCAGTATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHRQNMV*TSSISW
Trigger: CCAGGAAATACTGGAAGTCAAGACCATATTTTGCCT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGTGAGGTCACAGGGCTaGGTATGGTTGAAATGCCTT +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRVRSQG*VWLKCL
Trigger: AAGGCATTTCAACCATACCAAGCCCTGTGACCTCAC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGTCCAGTTTCATTCTTCTGCATAGGGCTAGCCAGTTATCCCAACACCATTTATCAGCCCCTAATATGCTaGCTTTGCCTATATTTGTTA +
Preference number: 5 (lower is better)
Translates to: GPVSFFCIGLASYPNTIYQPLIC*LCLYLL
Trigger: TAACAAATATAGGCAAAGCAAGCATATTAGGGGCTG...ATAAATGGTGTTGGGATAACTGGCTAGCCCTATGCAGAAGAATGAAACTGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGGATCTAAATTGGGTTTaGCATCATCATCGTGCTCAT +
Preference number: 5 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLDLNWV*HHHRAH
Trigger: ATGAGCACGATGATGATGCAAAACCCAATTTAGATC...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp ATAGCCAAAGCAACCCAAAGCAGAAAGAACAAAGCCAGCAGCATCACACAGATGTCAAGAGAGTTCAGATaGGATCTAAATTGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: IAKATQSRKNKASSITQMSREFR*DLNWVL
Trigger: CAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA...CATCTGTGTGATGCTGCTGGCTTTGTTCTTTCTGCTTTGGGTTGCTTTGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSTSRSC*ILWRRF
Trigger: AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGT...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGGCACTTTAAATGTTTaGGTGCCTTGGTGTATTAAC +
Preference number: 5 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSGTLNV*VPWCIN
Trigger: GTTAATACACCAAGGCACCAAAACATTTAAAGTGCC...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGAACTTTGCTCCCAGTTaGACAATGATTATTGGGAAG +
Preference number: 5 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLNFAPS*TMIIGK
Trigger: CTTCCCAATAATCATTGTCAAACTGGGAGCAAAGTT...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGAACTTTGCTCCCAGTTaGACAATGATTATTGGGAAG +
Preference number: 5 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKNFAPS*TMIIGK
Trigger: CTTCCCAATAATCATTGTCAAACTGGGAGCAAAGTT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCATGTGGCTGGCTGCAAAGAGTTTTTCATGGAGTTaGCTGCCTTTCACTTCACTT +
Preference number: 5 (lower is better)
Translates to: LNLLRLWLPAVSMWLAAKSFSWS*LPFTSL
Trigger: AAGTGAAGTGAAAGGCAGCAAACTCCATGAAAAACT...CTTTGCAGCCAGCCACATGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCGCCAATGGACTATTTTaGGGGAATGCACATACATAC +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAANGLF*GNAHTY
Trigger: GTATGTATGTGCATTCCCCAAAAATAGTCCATTGGC...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACATGGGGAGGAAGCAAGTaGTACCATGTTACATATAAA +
Preference number: 5 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTWGGSK*YHVTYK
Trigger: TTTATATGTAACATGGTACAACTTGCTTCCTCCCCA...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCACTTTTAAAGTCACTTaGGTAGCAAAGGTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFTFKVT*VAKVGE
Trigger: TTCCCCCACCTTTGCTACCAAAGTGACTTTAAAAGT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTACTTTTAAAGTCACTTaGGTAGCAAAGGTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSTFKVT*VAKVGE
Trigger: TTCCCCCACCTTTGCTACCAAAGTGACTTTAAAAGT...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATCATCATCAAAGGGCTTaGGTTGTCATCAGACCTATG +
Preference number: 5 (lower is better)
Translates to: VSGEQDNKRINSARETQYHHQRA*VVIRPM
Trigger: CATAGGTCTGATGACAACCAAAGCCCTTTGATGATG...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAATTCTGTGCCTATTTCTaGTCTAATCATTGTGGCTTA +
Preference number: 5 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKFCAYF*SNHCGL
Trigger: TAAGCCACAATGATTAGACAAGAAATAGGCACAGAA...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATCCATGTGCCACTGGATaGTGTTTAACAGCCATAGAA +
Preference number: 5 (lower is better)
Translates to: VSGEQDNKRINSARETQYPCATG*CLTAIE
Trigger: TTCTATGGCTGTTAAACACAATCCAGTGGCACATGG...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGAGGGGAAAGGAACACGTaGTTAATGGGGGCTCACAAG +
Preference number: 5 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRGERNT*LMGAHK
Trigger: CTTGTGAGCCCCCATTAACAACGTGTTCCTTTCCCC...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAGGTTGCTCACTGTAGGGCACAACTACTTGTTTCGGGTGAGCAAGATAACAAACTCCAATTCTGTATGTaGTCTGTTTACTCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: EVAHCRAQLLVSGEQDNKLQFCM*SVYSVD
Trigger: ATCAACAGAGTAAACAGACAACATACAGAATTGGAG...TTTGTTATCTTGCTCACCCGAAACAAGTAGTTGTGCCCTACAGTGAGCAACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGAACCCATATGCTGGGTaGAATGGTAGATCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLNPYAG*NGRSVL
Trigger: TAAAACAGATCTACCATTCAACCCAGCATATGGGTT...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGCAAAGGACATGATTTaGTTCTTTTTATGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTAKDMI*FFLWLP
Trigger: AGGCAGCCATAAAAAGAACAAAATCATGTCCTTTGC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS TCA 90 bp AATTTTAAGGCAGGTGTTTGTGTCATAGATGATGCTTTCAATCCGTaGAGCCGTTCTTCTATTTCCTTCAGCCTAAGAAGGGGTATGAGA +
Preference number: 5 (lower is better)
Translates to: NFKAGVCVIDDAFNP*SRSSISFSLRRGMR
Trigger: TCTCATACCCCTTCTTAGGCTGAAGGAAATAGAAGAACGGCTTCACGGATTGAAAGCATCATCTATGACACAAACACCTGCCTTAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555400.1
CDS-3UTR CAA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGGCCCCTAAAACAATaGAGATGTTCTTGCTCAATT +
Preference number: 5 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFWPLKQ*RCSCSI
Trigger: AATTGAGCAAGAACATCTCAATTGTTTTAGGGGCCA...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTGGCCCCTAAAACAATaGAGATGTTCTTGCTCAATT +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAWPLKQ*RCSCSI
Trigger: AATTGAGCAAGAACATCTCAATTGTTTTAGGGGCCA...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGAAACTATGAACAGCTaGGGAATGCTTTCGTTTAAG +
Preference number: 5 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHETMNS*GMLSFK
Trigger: CTTAAACGAAAGCATTCCCAAGCTGTTCATAGTTTC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323669.10
ENST00000674014.1
CDS-3UTR CAA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTGAAATTCAACATGTGTaGCATGGTTGGAAAAATGCC +
Preference number: 5 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFEIQHV*HGWKNA
Trigger: GGCATTTTTCCAACCATGCAACACATGTTGAATTTC...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGGAAATTCAACATGTGTaGCATGGTTGGAAAAATGCC +
Preference number: 5 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWEIQHV*HGWKNA
Trigger: GGCATTTTTCCAACCATGCAACACATGTTGAATTTC...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTGAAATTCAACATGTGTaGCATGGTTGGAAAAATGCC +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSEIQHV*HGWKNA
Trigger: GGCATTTTTCCAACCATGCAACACATGTTGAATTTC...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTGAAATTCAACATGTGTaGCATGGTTGGAAAAATGCC +
Preference number: 5 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSEIQHV*HGWKNA
Trigger: GGCATTTTTCCAACCATGCAACACATGTTGAATTTC...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGCTTAAACCTCGTACTTaGTCAGGAGTAATGGAATCA +
Preference number: 5 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWLKPRT*SGVMES
Trigger: TGATTCCATTACTCCTGACAAAGTACGAGGTTTAAG...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAAATACATTATGTCCATaGCACTGCTGTTCAGCATAT +
Preference number: 5 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSNTLCP*HCCSAY
Trigger: ATATGCTGAACAGCAGTGCAATGGACATAATGTATT...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGAATACATTATGTCCATaGCACTGCTGTTCAGCATAT +
Preference number: 5 (lower is better)
Translates to: CSLYMQFTQTFFTSRSCLNTLCP*HCCSAY
Trigger: ATATGCTGAACAGCAGTGCAATGGACATAATGTATT...CAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGAAAGGATTTGAAGTATaGTACCAGTGGATCTGGACA +
Preference number: 5 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTKGFEV*YQWIWT
Trigger: TGTCCAGATCCACTGGTACAATACTTCAAATCCTTT...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCAGCCCCTAATATGCTaGCTTTGCCTATATTTGTTA +
Preference number: 5 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSQPLIC*LCLYLL
Trigger: TAACAAATATAGGCAAAGCAAGCATATTAGGGGCTG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCCAGCCCCTAATATGCTaGCTTTGCCTATATTTGTTA +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAQPLIC*LCLYLL
Trigger: TAACAAATATAGGCAAAGCAAGCATATTAGGGGCTG...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATATGAACGTCCAAATCTaGAGAACAACATTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHMNVQI*RTTFLQ
Trigger: TTGGAGGAATGTTGTTCTCAAGATTTGGACGTTCAT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCATGAACGTCCAAATCTaGAGAACAACATTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFMNVQI*RTTFLQ
Trigger: TTGGAGGAATGTTGTTCTCAAGATTTGGACGTTCAT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTATGAACGTCCAAATCTaGAGAACAACATTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSMNVQI*RTTFLQ
Trigger: TTGGAGGAATGTTGTTCTCAAGATTTGGACGTTCAT...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCGATCTAAATTGGGTTTaGCATCATCATCGTGCTCAT +
Preference number: 5 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFDLNWV*HHHRAH
Trigger: ATGAGCACGATGATGATGCAAAACCCAATTTAGATC...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTGATCTAAATTGGGTTTaGCATCATCATCGTGCTCAT +
Preference number: 5 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFDLNWV*HHHRAH
Trigger: ATGAGCACGATGATGATGCAAAACCCAATTTAGATC...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGCAGATTGGATCTAAATaGGGTTTTGCATCATCATCG +
Preference number: 5 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWQIGSK*GFASSS
Trigger: CGATGATGATGCAAAACCCAATTTAGATCCAATCTG...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATCAGATTGGATCTAAATaGGGTTTTGCATCATCATCG +
Preference number: 5 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHQIGSK*GFASSS
Trigger: CGATGATGATGCAAAACCCAATTTAGATCCAATCTG...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCATCAAGAGAGTTCAGATaGGATCTAAATTGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: PNLLHIQVLLDSLEKVLSSREFR*DLNWVL
Trigger: CAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA...TGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TCAAGAGAGTTCAGATTGGATCTAAATTGGGTTTTGCATCATCATCGTGCTCATACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: SREFRLDLNWVLHHHRAHTSRSC*ILWRRF
Trigger: AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGT...ATGAGCACGATGATGATGCAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGACTGACTTACTGTGCCTaGTGTCTCAATGGCACATTG +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRLTYCA*CLNGTL
Trigger: CAATGTGCCATTGAGACACAAGGCACAGTAAGTCAG...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGGGCACTTTAAATGTTTaGGTGCCTTGGTGTATTAAC +
Preference number: 5 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTGTLNV*VPWCIN
Trigger: GTTAATACACCAAGGCACCAAAACATTTAAAGTGCC...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCAATTTTTGTCAGTTTTaGCAGAGAAGAGGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFNFCQF*QRRGSH
Trigger: GTGAGACCCTCTTCTCTGCAAAAACTGACAAAAATT...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCAAGTTCTTATGCATTaGAGTGTCATACCACCTACA +
Preference number: 5 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSQVLMH*SVIPPT
Trigger: TGTAGGTGGTATGACACTCAAATGCATAAGAACTTG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCCAAGTTCTTATGCATTaGAGTGTCATACCACCTACA +
Preference number: 5 (lower is better)
Translates to: GRNQIVICSLYMQFTQTFQVLMH*SVIPPT
Trigger: TGTAGGTGGTATGACACTCAAATGCATAAGAACTTG...GAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTAGTTTTTCATGGAGTTaGCTGCCTTTCACTTCACTT +
Preference number: 5 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFSFSWS*LPFTSL
Trigger: AAGTGAAGTGAAAGGCAGCAAACTCCATGAAAAACT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTGGGGAGGAAGCAAGTaGTACCATGTTACATATAAA +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAWGGSK*YHVTYK
Trigger: TTTATATGTAACATGGTACAACTTGCTTCCTCCCCA...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCATTCAAGACATGGAATaGGCTAGGAGAGGATCCAAA +
Preference number: 5 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTIQDME*ARRGSK
Trigger: TTTGGATCCTCTCCTAGCCAATTCCATGTCTTGAAT...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTCTCTTGGCTCATTTCTaGTGTATGCTTCCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSLLAHF*CMLPFH
Trigger: ATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAG...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACGTTCTCCAGGAACTCTaGGCTCATTTCTTGTGTATG +
Preference number: 5 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYVLQEL*AHFLCM
Trigger: CATACACAAGAAATGAGCCAAGAGTTCCTGGAGAAC...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTAGCCAAAAGTTCTTaGCCAAGGCTGATGTTGATA +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGALAKSS*PRLMLI
Trigger: TATCAACATCAGCCTTGGCAAAGAACTTTTGGCTAA...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCAACCCATATGCTGGGTaGAATGGTAGATCTGTTTTA +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGANPYAG*NGRSVL
Trigger: TAAAACAGATCTACCATTCAACCCAGCATATGGGTT...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATGCAAAGGACATGATTTaGTTCTTTTTATGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHAKDMI*FFLWLP
Trigger: AGGCAGCCATAAAAAGAACAAAATCATGTCCTTTGC...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGACTGTTGTTCCCACCTTaGCATCCTGAGGTACTCAAT +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRLLFPP*HPEVLN
Trigger: ATTGAGTACCTCAGGATGCAAAGGTGGGAACAACAG...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTAGTCTGCAGTGTCTGTaGTTCCCACCTTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: EVKRKIPKACFTYKRAVISLQCL*FPPLHP
Trigger: AGGATGCAAAGGTGGGAACAACAGACACTGCAGACT...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TGTCTAAGCTGTCAGACTGTCATGACCATGCACCAATCTCTTTCCTTTCACACAGGTAAATGTGCAAGTTaGTTACAAGGGTATATTGTG +
Preference number: 5 (lower is better)
Translates to: CLSCQTVMTMHQSLSFHTGKCAS*LQGYIV
Trigger: CACAATATACCCTTGTAACAAACTTGCACATTTACC...TGTGTGAAAGGAAAGAGATTGGTGCATGGTCATGACAGTCTGACAGCTTAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTCCGGAAAAAGAAGTaGTGGGAGATTAAAGAACGA +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGAFRKKK*WEIKER
Trigger: TCGTTCTTTAATCTCCCACAACTTCTTTTTCCGGAA...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTGGCCCCTAAAACAATaGAGATGTTCTTGCTCAATT +
Preference number: 5 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTWPLKQ*RCSCSI
Trigger: AATTGAGCAAGAACATCTCAATTGTTTTAGGGGCCA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTAGAAAATCCCAGTTTTaGGGTAACTGTTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSRKSQF*GNCSCN
Trigger: ATTGCAAGAACAGTTACCCAAAAACTGGGATTTTCT...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTAGAAAATCCCAGTTTTaGGGTAACTGTTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: FTQTFFTSRSCLILWRRFRKSQF*GNCSCN
Trigger: ATTGCAAGAACAGTTACCCAAAAACTGGGATTTTCT...AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATCTTAAACCTCGTACTTaGTCAGGAGTAATGGAATCA +
Preference number: 5 (lower is better)
Translates to: VSGEQDNKRINSARETQYLKPRT*SGVMES
Trigger: TGATTCCATTACTCCTGACAAAGTACGAGGTTTAAG...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTCTTCACATCCAGGTCTTGCTTGATTCTCTGGAGAAGGTTTTGTCAGACTCATAATACATTATGTCCATaGCACTGCTGTTCAGCATAT +
Preference number: 5 (lower is better)
Translates to: FFTSRSCLILWRRFCQTHNTLCP*HCCSAY
Trigger: ATATGCTGAACAGCAGTGCAATGGACATAATGTATT...ATGAGTCTGACAAAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTAGGAATGTGATACTATaGAGACTTTACCCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSRNVIL*RLYPLF
Trigger: AAAAAGGGGGTAAAGTCTCAATAGTATCACATTCCT...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp AAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCAGGAATGTGATACTATaGAGACTTTACCCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: KAFYSKGFLVSHILGHGARNVIL*RLYPLF
Trigger: AAAAAGGGGGTAAAGTCTCAATAGTATCACATTCCT...GGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTAGGAATGTGATACTATaGAGACTTTACCCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: VICSLYMQFTQTFFTSRSRNVIL*RLYPLF
Trigger: AAAAAGGGGGTAAAGTCTCAATAGTATCACATTCCT...AGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTACAAATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CAAGAAGATGTCGTTCTTCATAGCTCATCCATCGTTCATCAGGCAACTCTTCTTAGGAATGTGATACTATaGAGACTTTACCCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: QEDVVLHSSSIVHQATLLRNVIL*RLYPLF
Trigger: AAAAAGGGGGTAAAGTCTCAATAGTATCACATTCCT...AAGAAGAGTTGCCTGATGAACGATGGATGAGCTATGAAGAACGACATCTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCAAAGGATTTGAAGTATaGTACCAGTGGATCTGGACA +
Preference number: 5 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTKGFEV*YQWIWT
Trigger: TGTCCAGATCCACTGGTACAATACTTCAAATCCTTT...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCATGAACGTCCAAATCTaGAGAACAACATTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTMNVQI*RTTFLQ
Trigger: TTGGAGGAATGTTGTTCTCAAGATTTGGACGTTCAT...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCCAGATTGGATCTAAATaGGGTTTTGCATCATCATCG +
Preference number: 5 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTQIGSK*GFASSS
Trigger: CGATGATGATGCAAAACCCAATTTAGATCCAATCTG...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTCAGATTGGATCTAAATaGGGTTTTGCATCATCATCG +
Preference number: 5 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSQIGSK*GFASSS
Trigger: CGATGATGATGCAAAACCCAATTTAGATCCAATCTG...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCTTTACATGCAGTTTACCCAAACCTTCTTCACATCCAGGTCTTGCTTGATTCTTCAAGAGAGTTCAGATaGGATCTAAATTGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: PLHAVYPNLLHIQVLLDSSREFR*DLNWVL
Trigger: CAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA...AGAATCAAGCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
ENST00000674014.1
CDS-3UTR CAA 90 bp ATGCATTTGAGTGTCATACCACCTACAGCAACATACGCTCAAGTACCTTTAACGTCAAGAGAGTTCAGATaGGATCTAAATTGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: MHLSVIPPTATYAQVPLTSREFR*DLNWVL
Trigger: CAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA...CGTTAAAGGTACTTGAGCGTATGTTGCTGTAGGTGGTATGACACTCAAATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTCACATCCAGGTCTaGCTTGATTCTCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: AKISSKAFYSKGFLVSHILHIQV*LDSLEK
Trigger: CTTCTCCAGAGAATCAAGCAAGACCTGGATGTGAAG...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAAGGCACTTTAAATGTTTaGGTGCCTTGGTGTATTAAC +
Preference number: 5 (lower is better)
Translates to: FYSKGFLVSHILGHGALEGTLNV*VPWCIN
Trigger: GTTAATACACCAAGGCACCAAAACATTTAAAGTGCC...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGTTGGTTTTCAACTCTaGGGCTCAAGTAATCTTCCC +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRVGFQL*GSSNLP
Trigger: GGGAAGATTACTTGAGCCCAAGAGTTGAAAACCAAC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTTTTTCCTGGGTATTTaGAATCTGAGGCATAAACGG +
Preference number: 5 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTFFLGI*NLRHKR
Trigger: CCGTTTATGCCTCAGATTCAAAATACCCAGGAAAAA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTGGGGAGGAAGCAAGTaGTACCATGTTACATATAAA +
Preference number: 5 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTWGGSK*YHVTYK
Trigger: TTTATATGTAACATGGTACAACTTGCTTCCTCCCCA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACATTCAAGACATGGAATaGGCTAGGAGAGGATCCAAA +
Preference number: 5 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYIQDME*ARRGSK
Trigger: TTTGGATCCTCTCCTAGCCAATTCCATGTCTTGAAT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CACAAAGGCAGAGGAAAAGTTCACCCTAACAATCTGCCAATGGACTATTTTTGGTTCTGTGCCTATTTCTaGTCTAATCATTGTGGCTTA +
Preference number: 5 (lower is better)
Translates to: HKGRGKVHPNNLPMDYFWFCAYF*SNHCGL
Trigger: TAAGCCACAATGATTAGACAAGAAATAGGCACAGAA...CCAAAAATAGTCCATTGGCAGATTGTTAGGGTGAACTTTTCCTCTGCCTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACCATGTGCCACTGGATaGTGTTTAACAGCCATAGAA +
Preference number: 5 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPPCATG*CLTAIE
Trigger: TTCTATGGCTGTTAAACACAATCCAGTGGCACATGG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATTTAGCCAAAAGTTCTTaGCCAAGGCTGATGTTGATA +
Preference number: 5 (lower is better)
Translates to: VSGEQDNKRINSARETQYLAKSS*PRLMLI
Trigger: TATCAACATCAGCCTTGGCAAAGAACTTTTGGCTAA...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTTTCGGGTGAGCAAGATAACAAACGGATCAATTCAGCTAGAGAAACACAGTATTGTCTGTTTACTCTGTaGATAGTGTCTTTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: VSGEQDNKRINSARETQYCLFTL*IVSFAV
Trigger: CACAGCAAAAGACACTATCAACAGAGTAAACAGACA...ATACTGTGTTTCTCTAGCTGAATTGATCCGTTTGTTATCTTGCTCACCCGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTGGGAGGAATCAGATTGTGATTTGTAGCCTTTACATGCAGTTTACCCAAACCTGTCTGTTTACTCTGTaGATAGTGTCTTTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: FGRNQIVICSLYMQFTQTCLFTL*IVSFAV
Trigger: CACAGCAAAAGACACTATCAACAGAGTAAACAGACA...GGTTTGGGTAAACTGCATGTAAAGGCTACAAATCACAATCTGATTCCTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TTTTATAGCAAGGGTTTCTTAGTGAGTCACATACTTGGTCATGGAGCCTTGGAATGTCTGTTTACTCTGTaGATAGTGTCTTTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: FYSKGFLVSHILGHGALECLFTL*IVSFAV
Trigger: CACAGCAAAAGACACTATCAACAGAGTAAACAGACA...TTCCAAGGCTCCATGACCAAGTATGTGACTCACTAAGAAACCCTTGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS TCA 90 bp ATACTTCATCCACACTGTGCCAGTCCACATGGTTTCGACTCAACTTaGAACTATGAACAGCTATTGCAAAAAGGAAAAGCTAATTTGAAG +
Preference number: 5 (lower is better)
Translates to: ILHPHCASPHGFDST*NYEQLLQKGKANLK
Trigger: CTTCAAATTAGCTTTTCCTTTTTGCAATAGCTGTTCATAGTTTCAAGTTGAGTCGAAACCATGTGGACTGGCACAGTGTGGATGAAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553406.1
ENST00000556027.5
CDS-3UTR CAA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTGTAGTCTGTGATGGCTaGTCTTCTAATGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSVVCDG*SSNVAS
Trigger: AGAAGCCACATTAGAAGACAAGCCATCACAGACTAC...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGACAACTCTTCTTCCTTTaGCAGCAACTGTTCATACAG +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRQLFFL*QQLFIQ
Trigger: CTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTTG...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TCAAGAGAGTTCAGATTGGATCTAAATTGGGTTTTGCATCATCATCGTGCTCATATGAACGTCCAAATCTaGAGAACAACATTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: SREFRLDLNWVLHHHRAHMNVQI*RTTFLQ
Trigger: TTGGAGGAATGTTGTTCTCAAGATTTGGACGTTCAT...ATGAGCACGATGATGATGCAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTTCAAGAGAGTTCAGATaGGATCTAAATTGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSSREFR*DLNWVL
Trigger: CAAAACCCAATTTAGATCCAATCTGAACTCTCTTGA...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTACATCCAGGTCTTGCTaGATTCTCTGGAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: STCWNKVAKCYSVTDLASTSRSC*ILWRRF
Trigger: AAACCTTCTCCAGAGAATCAAGCAAGACCTGGATGT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAACTTTTAAAGTCACTTaGGTAGCAAAGGTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPTFKVT*VAKVGE
Trigger: TTCCCCCACCTTTGCTACCAAAGTGACTTTAAAAGT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCATCATCAAAGGGCTTaGGTTGTCATCAGACCTATG +
Preference number: 5 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSHHQRA*VVIRPM
Trigger: CATAGGTCTGATGACAACCAAAGCCCTTTGATGATG...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACCTCTTGGCTCATTTCTaGTGTATGCTTCCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYLLAHF*CMLPFH
Trigger: ATGAAAAGGAAGCATACACAAGAAATGAGCCAAGAG...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACTTAGCCAAAAGTTCTTaGCCAAGGCTGATGTTGATA +
Preference number: 5 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYLAKSS*PRLMLI
Trigger: TATCAACATCAGCCTTGGCAAAGAACTTTTGGCTAA...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp CCTACAGCAACATACGCTCAAGTACCTTTAACGATACAGTCATATAGCATGAGTGGTAAATGTGCAAGTTaGTTACAAGGGTATATTGTG +
Preference number: 5 (lower is better)
Translates to: PTATYAQVPLTIQSYSMSGKCAS*LQGYIV
Trigger: CACAATATACCCTTGTAACAAACTTGCACATTTACC...ACTCATGCTATATGACTGTATCGTTAAAGGTACTTGAGCGTATGTTGCTGTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS GCA 90 bp AAAAAGATACAGTATCAACTTAAGGAAATAATGTATGAACTAACATaGAGAATCGAGGAAGCCAGAACTGCTATGTGGAAGGGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: KKIQYQLKEIMYELT*RIEEARTAMWKGLC
Trigger: ACACAGACCCTTCCACATAGCAGTTCTGGCTTCCTCGATTCTGCATGTTAGTTCATACATTATTTCCTTAAGTTGATACTGTATCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555400.1
CDS GCA 90 bp CTTTATAAACTTCAGGGGGTACTTACCCTAAAGAGATTTGTTTTATaGTTGATGGTTAAGACCTTGTGCCACAAGGCCCTAATTACTAAT +
Preference number: 5 (lower is better)
Translates to: LYKLQGVLTLKRFVL*LMVKTLCHKALITN
Trigger: ATTAGTAATTAGGGCCTTGTGGCACAAGGTCTTAACCATCAAGCATAAAACAAATCTCTTTAGGGTAAGTACCCCCTGAAGTTTATAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555400.1
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGAAATTCAACATGTGTaGCATGGTTGGAAAAATGCC +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLREIQHV*HGWKNA
Trigger: GGCATTTTTCCAACCATGCAACACATGTTGAATTTC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACAATACATTATGTCCATaGCACTGCTGTTCAGCATAT +
Preference number: 5 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYNTLCP*HCCSAY
Trigger: ATATGCTGAACAGCAGTGCAATGGACATAATGTATT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AAATCCCTTCAAGTTCTTATGCATTTGAGTGTCATACCACCTACAGCAACATACAGGAATGTGATACTATaGAGACTTTACCCCCTTTTT +
Preference number: 5 (lower is better)
Translates to: KSLQVLMHLSVIPPTATYRNVIL*RLYPLF
Trigger: AAAAAGGGGGTAAAGTCTCAATAGTATCACATTCCT...GTATGTTGCTGTAGGTGGTATGACACTCAAATGCATAAGAACTTGAAGGGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp TATCAAAGGAACATATCTCAAAATAATAAGAGCCATCTACAACCAACCCACAGACAACTCTTCTTCCTTTaGCAGCAACTGTTCATACAG +
Preference number: 5 (lower is better)
Translates to: YQRNISQNNKSHLQPTHRQLFFL*QQLFIQ
Trigger: CTGTATGAACAGTTGCTGCAAAAGGAAGAAGAGTTG...TCTGTGGGTTGGTTGTAGATGGCTCTTATTATTTTGAGATATGTTCCTTTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCAAAAGGATTTGAAGTATaGTACCAGTGGATCTGGACA +
Preference number: 5 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPKGFEV*YQWIWT
Trigger: TGTCCAGATCCACTGGTACAATACTTCAAATCCTTT...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACAGCCCCTAATATGCTaGCTTTGCCTATATTTGTTA +
Preference number: 5 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPQPLIC*LCLYLL
Trigger: TAACAAATATAGGCAAAGCAAGCATATTAGGGGCTG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTACTTGGTTTTCTGTTCTTAATTTGCTTAGATTATGGCTTCCAGCTGTATCCACAAGTTCTTATGCATTaGAGTGTCATACCACCTACA +
Preference number: 5 (lower is better)
Translates to: VLGFLFLICLDYGFQLYPQVLMH*SVIPPT
Trigger: TGTAGGTGGTATGACACTCAAATGCATAAGAACTTG...TGGATACAGCTGGAAGCCATAATCTAAGCAAATTAAGAACAGAAAACCAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGACAAGTTCTTATGCATTaGAGTGTCATACCACCTACA +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRQVLMH*SVIPPT
Trigger: TGTAGGTGGTATGACACTCAAATGCATAAGAACTTG...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGATATGTTGGAACAGTTTaGGAGGTGACCTATTTGTCA +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRYVGTV*EVTYLS
Trigger: TGACAAATAGGTCACCTCCAAAACTGTTCCAACATA...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTTTGCCAATTTCTGTTTaGTTGCAATTGCCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSLPISV*LQLPLG
Trigger: CCCCAAAGGCAATTGCAACAAAACAGAAATTGGCAA...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGCAAAGGACATGATTTaGTTCTTTTTATGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRAKDMI*FFLWLP
Trigger: AGGCAGCCATAAAAAGAACAAAATCATGTCCTTTGC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAGAAATTCAACATGTGTaGCATGGTTGGAAAAATGCC +
Preference number: 5 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIEIQHV*HGWKNA
Trigger: GGCATTTTTCCAACCATGCAACACATGTTGAATTTC...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCTTAAACCTCGTACTTaGTCAGGAGTAATGGAATCA +
Preference number: 5 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSLKPRT*SGVMES
Trigger: TGATTCCATTACTCCTGACAAAGTACGAGGTTTAAG...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAAAAGGATTTGAAGTATaGTACCAGTGGATCTGGACA +
Preference number: 5 (lower is better)
Translates to: AKISSKAFYSKGFLVSHIKGFEV*YQWIWT
Trigger: TGTCCAGATCCACTGGTACAATACTTCAAATCCTTT...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GTGAAATGTTGCTGTAGTGTTTCAGTATTAATGGTTCTAATCTATAAGCCACTGAAAGGATTTGAAGTATaGTACCAGTGGATCTGGACA +
Preference number: 5 (lower is better)
Translates to: VKCCCSVSVLMVLIYKPLKGFEV*YQWIWT
Trigger: TGTCCAGATCCACTGGTACAATACTTCAAATCCTTT...CAGTGGCTTATAGATTAGAACCATTAATACTGAAACACTACAGCAACATTTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS-3UTR CAA 90 bp GAAGTAAAACGTAAGATTCCTAAGGCTTGCTTCACATACAAAAGAGCAGTTATTATGAACGTCCAAATCTaGAGAACAACATTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: EVKRKIPKACFTYKRAVIMNVQI*RTTFLQ
Trigger: TTGGAGGAATGTTGTTCTCAAGATTTGGACGTTCAT...AATAACTGCTCTTTTGTATGTGAAGCAAGCCTTAGGAATCTTACGTTTTACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTCAGATTGGATCTAAATaGGGTTTTGCATCATCATCG +
Preference number: 5 (lower is better)
Translates to: STCWNKVAKCYSVTDLASQIGSK*GFASSS
Trigger: CGATGATGATGCAAAACCCAATTTAGATCCAATCTG...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTAATTTTTGTCAGTTTTaGCAGAGAAGAGGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: STCWNKVAKCYSVTDLASNFCQF*QRRGSH
Trigger: GTGAGACCCTCTTCTCTGCAAAAACTGACAAAAATT...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GGAAGAGTTACCACAAACTGTATGATGAGGATTATTTTCTCCAGAATGCTTAGAGGTAAATGTGCAAGTTaGTTACAAGGGTATATTGTG +
Preference number: 5 (lower is better)
Translates to: GRVTTNCMMRIIFSRMLRGKCAS*LQGYIV
Trigger: CACAATATACCCTTGTAACAAACTTGCACATTTACC...TCTAAGCATTCTGGAGAAAATAATCCTCATCATACAGTTTGTGGTAACTCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTAGAAAATCCCAGTTTTaGGGTAACTGTTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSRKSQF*GNCSCN
Trigger: ATTGCAAGAACAGTTACCCAAAAACTGGGATTTTCT...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp GCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCACATAAATACATTATGTCCATaGCACTGCTGTTCAGCATAT +
Preference number: 5 (lower is better)
Translates to: AKISSKAFYSKGFLVSHINTLCP*HCCSAY
Trigger: ATATGCTGAACAGCAGTGCAATGGACATAATGTATT...TATGTGACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGCTTTGCTAAGATTTCATCAAAAGCCTTTTATAGCAAGGGTTTCTTAGTGAGTCTCCAATTCTGTATGTaGTCTGTTTACTCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: SFAKISSKAFYSKGFLVSLQFCM*SVYSVD
Trigger: ATCAACAGAGTAAACAGACAACATACAGAATTGGAG...ACTCACTAAGAAACCCTTGCTATAAAAGGCTTTTGATGAAATCTTAGCAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS-3UTR CAA 90 bp AGTACTTGCTGGAATAAAGTTGCAAAATGTTACTCAGTAACTGACTTAGCTTCTCTCCAATTCTGTATGTaGTCTGTTTACTCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: STCWNKVAKCYSVTDLASLQFCM*SVYSVD
Trigger: ATCAACAGAGTAAACAGACAACATACAGAATTGGAG...AGAAGCTAAGTCAGTTACTGAGTAACATTTTGCAACTTTATTCCAGCAAGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS GCA 72 bp CGGGGCTCCGTGGGGACCCGCGGCCCGGGTAATTCATaGTGTGGAGACGCCGCCGGCTGTCCGGCGGCGCGC +
Preference number: 6 (lower is better)
Translates to: RGSVGTRGPGNS*CGDAAGCPAAR
Trigger: GCGCGCCGCCGGACAGCCGGCGGCGTCTCCACAGCATGAATTACCCGGGCCGCGGGTCCCCACGGAGCCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS GCA 72 bp CCGCTCCGCCCCCACGAGACCCGCAGCCGCCGCAGCTaGGTTCTGCCGCCGGCCCCATTGTCACGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: PLRPHETRSRRS*VLPPAPLSRSP
Trigger: CGGGCTGCGTGACAATGGGGCCGGCGGCAGAACGCAGCTGCGGCGGCTGCGGGTCTCGTGGGGGCGGAGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673822.2
CDS TCA 72 bp GAGACGCCGCCGGCTGTCCGGCGGCGCGCGGAGCCGTaGCCCCCAGCGCTTCCGCCACACATTCAACGCCGC +
Preference number: 6 (lower is better)
Translates to: ETPPAVRRRAEP*PPALPPHIQRR
Trigger: GCGGCGTTGAATGTGTGGCGGAAGCGCTGGGGGTCACGGCTCCGCGCGCCGCCGGACAGCCGGCGGCGTCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS GCA 72 bp GCCCCCACGAGACCCGCAGCCGCCGCAGCTGCGTTCTaGCGCCGGCCCCATTGTCACGCAGCCCGACGTAGG +
Preference number: 6 (lower is better)
Translates to: APTRPAAAAAAF*RRPHCHAARRR
Trigger: CCTACGTCGGGCTGCGTGACAATGGGGCCGGCGGCAGAACGCAGCTGCGGCGGCTGCGGGTCTCGTGGGGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673822.2
CDS GCA 72 bp AGGTGGTGGTTGTGGTCGTCGGTGCCCGGCGCCAAATaGAGCCCGGGTTCCCCGCGCAGCAGGGCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: RWWLWSSVPGAK*SPGSPRSRARG
Trigger: GCCCCTGGCCCTGCTGCGCGGGGAACCCGGGCTGCATTTGGCGCCGGGCACCGACGACCACAACCACCACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS GCA 72 bp GCGGAGGCTGCTGCGGCGGGTGCAGCGACAAGGAGCTaGCGCCGCCGCCGCTCTCACCCTCGCTGTAGTAGC +
Preference number: 6 (lower is better)
Translates to: AEAAAAGAATRS*RRRRSHPRCSS
Trigger: GCTACTACAGCGAGGGTGAGAGCGGCGGCGGCGGCAGCTCCTTGTCGCTGCACCCGCCGCAGCAGCCTCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS GCA 72 bp GAGTTCGTCGGGACCAGCGGAGGCTGCTGCGGCGGGTaGAGCGACAAGGAGCTGCCGCCGCCGCCGCTCTCA +
Preference number: 6 (lower is better)
Translates to: EFVGTSGGCCGG*SDKELPPPPLS
Trigger: TGAGAGCGGCGGCGGCGGCAGCTCCTTGTCGCTGCACCCGCCGCAGCAGCCTCCGCTGGTCCCGACGAACTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS CCA 72 bp GCCGCCGCCGCCTCGGCCGTTATGCTCGGGGCTCCGTaGGGACCCGCGGCCCGGGTAATTCATGCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: AAAASAVMLGAP*GPAARVIHAVE
Trigger: CTCCACAGCATGAATTACCCGGGCCGCGGGTCCCCACGGAGCCCCGAGCATAACGGCCGAGGCGGCGGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
CDS CCA 72 bp TCACTGAGGCAGGGGTCCAGCGCGAGGTGGTGGTTGTaGTCGTCGGTGCCCGGCGCCAAATGCAGCCCGGGT +
Preference number: 6 (lower is better)
Translates to: SLRQGSSARWWL*SSVPGAKCSPG
Trigger: ACCCGGGCTGCATTTGGCGCCGGGCACCGACGACCACAACCACCACCTCGCGCTGGACCCCTGCCTCAGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS CCA 72 bp CATCGTCATCTTCTCCGGAACTGGAGGCTGGGCCCGTaGGGGAGCACACATGGTCGCCGTCCCGGTCCCCGC +
Preference number: 6 (lower is better)
Translates to: HRHLLRNWRLGP*GSTHGRRPGPR
Trigger: GCGGGGACCGGGACGGCGACCATGTGTGCTCCCCCACGGGCCCAGCCTCCAGTTCCGGAGAAGATGACGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
ENST00000673930.1
CDS CCA 72 bp GCGGTCCTCATCGTCATCTTCTCCGGAACTGGAGGCTaGGCCCGTGGGGGAGCACACATGGTCGCCGTCCCG +
Preference number: 6 (lower is better)
Translates to: AVLIVIFSGTGG*ARGGAHMVAVP
Trigger: CGGGACGGCGACCATGTGTGCTCCCCCACGGGCCCAGCCTCCAGTTCCGGAGAAGATGACGATGAGGACCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
ENST00000673930.1
CDS GCA 72 bp GGCTCGATGTTCACAAGCTCCACCATCTCCGGCTCGTaGCCCGTCGTACTCTGGCAGAAGCCGCAGGCGCGG +
Preference number: 6 (lower is better)
Translates to: GSMFTSSTISGS*PVVLWQKPQAR
Trigger: CCGCGCCTGCGGCTTCTGCCAGAGTACGACGGGGCACGAGCCGGAGATGGTGGAGCTTGTGAACATCGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
ENST00000673930.1
CDS CCA 72 bp TTCTCGTCACTGAGGCAGGGGTCCAGCGCGAGGTGGTaGTTGTGGTCGTCGGTGCCCGGCGCCAAATGCAGC +
Preference number: 6 (lower is better)
Translates to: FSSLRQGSSARW*LWSSVPGAKCS
Trigger: GCTGCATTTGGCGCCGGGCACCGACGACCACAACCACCACCTCGCGCTGGACCCCTGCCTCAGTGACGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000612692.4
ENST00000673822.2
CDS CCA 72 bp AGCTCCACCATCTCCGGCTCGTGCCCCGTCGTACTCTaGCAGAAGCCGCAGGCGCGGTCCTCATCGTCATCT +
Preference number: 6 (lower is better)
Translates to: SSTISGSCPVVL*QKPQARSSSSS
Trigger: AGATGACGATGAGGACCGCGCCTGCGGCTTCTGCCAGAGTACGACGGGGCACGAGCCGGAGATGGTGGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
ENST00000673930.1
CDS CAA 72 bp ATCAGCCTGGTTCCAGTACACCGGGTAGCACTCTCCTaGGGTCACATCCACCTCGTAGAGGCCGCCCCGCAC +
Preference number: 6 (lower is better)
Translates to: ISLVPVHRVALS*GHIHLVEAAPH
Trigger: GTGCGGGGCGGCCTCTACGAGGTGGATGTGACCCAAGGAGAGTGCTACCCGGTGTACTGGAACCAGGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000557445.1
ENST00000673822.2
ENST00000673930.1
ENST00000674014.1
CDS CAA 90 bp TGGTATTTTATCAGCCTGGTTCCAGTACACCGGGTAGCACTCTCCTaGGGTCACATCCACCTCGTAGAGGCCGCCCCGCACGCACACAGG +
Preference number: 6 (lower is better)
Translates to: WYFISLVPVHRVALS*GHIHLVEAAPHAHR
Trigger: CCTGTGTGCGTGCGGGGCGGCCTCTACGAGGTGGATGTGACCCAAGGAGAGTGCTACCCGGTGTACTGGAACCAGGCTGATAAAATACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000557445.1
ENST00000673822.2
ENST00000673930.1
ENST00000674014.1
CDS TCA 72 bp GGAAGGCGAGCTCGATGCGGAGCGAGTCGTAGCCGATaGAGGGCTTCCAGGTCTTCTTGTCCTCCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: GRRARCGASRSR*RASRSSCPPCR
Trigger: TCTACAAGGAGGACAAGAAGACCTGGAAGCCCTTCATCGGCTACGACTCGCTCCGCATCGAGCTCGCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000395606.5
ENST00000673822.2
ENST00000673930.1
CDS CCA 72 bp GTAACCCCAGAGCTTTGGGAGACCAAGGCGAGAGGATaGCTTGTGCCCAAAAATTTGAGACCAGCCTGGACA +
Preference number: 6 (lower is better)
Translates to: VTPELWETKARG*LVPKNLRPAWT
Trigger: TGTCCAGGCTGGTCTCAAATTTTTGGGCACAAGCCATCCTCTCGCCTTGGTCTCCCAAAGCTCTGGGGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556027.5
ENST00000673827.1
CDS CCA 72 bp CAGGCACTGTATTTCAAGCCTGTAACCCCAGAGCTTTaGGAGACCAAGGCGAGAGGATGGCTTGTGCCCAAA +
Preference number: 6 (lower is better)
Translates to: QALYFKPVTPEL*ETKARGWLVPK
Trigger: TTTGGGCACAAGCCATCCTCTCGCCTTGGTCTCCCAAAGCTCTGGGGTTACAGGCTTGAAATACAGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556027.5
ENST00000673827.1
CDS CAA 90 bp GTTGTCAGGCCAGGCACTGTATTTCAAGCCTGTAACCCCAGAGCTTaGGGAGACCAAGGCGAGAGGATGGCTTGTGCCCAAAAATTTGAG +
Preference number: 6 (lower is better)
Translates to: VVRPGTVFQACNPRA*GDQGERMACAQKFE
Trigger: CTCAAATTTTTGGGCACAAGCCATCCTCTCGCCTTGGTCTCCCAAAGCTCTGGGGTTACAGGCTTGAAATACAGTGCCTGGCCTGACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556027.5
ENST00000673827.1
CDS GCA 72 bp TTCTACTTACGCTTCAACCCATGCCGATCTGGTTTCTaGCCCATCAATCCATCTAAGTCACCAGTGACCTCC +
Preference number: 6 (lower is better)
Translates to: FYLRFNPCRSGF*PINPSKSPVTS
Trigger: GGAGGTCACTGGTGACTTAGATGGATTGATGGGGCAGAAACCAGATCGGCATGGGTTGAAGCGTAAGTAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556027.5
CDS CCA 72 bp CCAAGTGCCGTCAATAAACCACTGTCCACGCATTACTaGTATTTTATCAGCCTGGTTCCAGTACACCGGGTA +
Preference number: 6 (lower is better)
Translates to: PSAVNKPLSTHY*YFISLVPVHRV
Trigger: TACCCGGTGTACTGGAACCAGGCTGATAAAATACCAGTAATGCGTGGACAGTGGTTTATTGACGGCACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000557445.1
ENST00000612692.4
ENST00000673822.2
ENST00000673930.1
ENST00000674014.1
CDS TCA 72 bp GGGAGAAGGGAGGGAGGTGGTAGACAACAGAATAGTTaGTCCCACTGCCATCTTTTCCATCTATGGATTTTG +
Preference number: 6 (lower is better)
Translates to: GRREGGGRQQNS*SHCHLFHLWIL
Trigger: CAAAATCCATAGATGGAAAAGATGGCAGTGGGATCAACTATTCTGTTGTCTACCACCTCCCTCCCTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674014.1
CDS GCA 72 bp TTCCATTGCTTCACCTTCTACTTACGCTTCAACCCATaGCGATCTGGTTTCTGCCCCATCAATCCATCTAAG +
Preference number: 6 (lower is better)
Translates to: FHCFTFYLRFNP*RSGFCPINPSK
Trigger: CTTAGATGGATTGATGGGGCAGAAACCAGATCGGCATGGGTTGAAGCGTAAGTAGAAGGTGAAGCAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556027.5
CDS GCA 72 bp TATCTACCCTGTCTCTTTTCCAGCTATTGTCCCAAATaGGCCATTCATGTGCAGGTGCTCCCTTCACAATCT +
Preference number: 6 (lower is better)
Translates to: YLPCLFSSYCPK*AIHVQVLPSQS
Trigger: AGATTGTGAAGGGAGCACCTGCACATGAATGGCGCATTTGGGACAATAGCTGGAAAAGAGACAGGGTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556910.1
CDS CAA 72 bp GCACTGCTGTTCAGCATATCCCTTAAACCTCGTACTTaGTCAGGAGTAATGGAATCAACAGTGTCTCCATCA +
Preference number: 6 (lower is better)
Translates to: ALLFSISLKPRT*SGVMESTVSPS
Trigger: TGATGGAGACACTGTTGATTCCATTACTCCTGACAAAGTACGAGGTTTAAGGGATATGCTGAACAGCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000556027.5
ENST00000612692.4
ENST00000673822.2
ENST00000673827.1
ENST00000673930.1
ENST00000674014.1
CDS TCA 72 bp CCACACTGTGCCAGTCCACATGGTTTCGACTCAACTTaGAACTATGAACAGCATCTTTTCCATCTATGGATT +
Preference number: 6 (lower is better)
Translates to: PHCASPHGFDST*NYEQHLFHLWI
Trigger: AATCCATAGATGGAAAAGATGCTGTTCATAGTTTCAAGTTGAGTCGAAACCATGTGGACTGGCACAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357758.3
ENST00000556910.1
ENST00000612692.4
ENST00000673822.2
CDS TCA 72 bp CCACACTGTGCCAGTCCACATGGTTTCGACTCAACTTaGAACTATGAACAGCTATTGCAAAAAGGAAAAGCT +
Preference number: 6 (lower is better)
Translates to: PHCASPHGFDST*NYEQLLQKGKA
Trigger: AGCTTTTCCTTTTTGCAATAGCTGTTCATAGTTTCAAGTTGAGTCGAAACCATGTGGACTGGCACAGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553406.1
ENST00000556027.5
CDS CAA 90 bp ATGTCCATTGCACTGCTGTTCAGCATATCCCTTAAACCTCGTACTTaGTCAGGAGTAATGGAATCAACAGTGTCTCCATCAAGAGTAAGT +
Preference number: 6 (lower is better)
Translates to: MSIALLFSISLKPRT*SGVMESTVSPSRVS
Trigger: ACTTACTCTTGATGGAGACACTGTTGATTCCATTACTCCTGACAAAGTACGAGGTTTAAGGGATATGCTGAACAGCAGTGCAATGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000556027.5
ENST00000612692.4
ENST00000673822.2
ENST00000673827.1
ENST00000673930.1
ENST00000674014.1
CDS TCA 72 bp AATGGAATCAACAGTGTCTCCATCAAGAGTAAGTTTTaGCCGCCACTCAACAGGCAGAAATTCAACATGTGT +
Preference number: 6 (lower is better)
Translates to: NGINSVSIKSKF*PPLNRQKFNMC
Trigger: ACACATGTTGAATTTCTGCCTGTTGAGTGGCGGTCAAAACTTACTCTTGATGGAGACACTGTTGATTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000556027.5
ENST00000612692.4
ENST00000673822.2
ENST00000673827.1
ENST00000673930.1
ENST00000674014.1
CDS CCA 72 bp ATTTTCTGCCCAATGCCATGCACAACAAATACAATATaGGTAGTCTGTGATGGCTTGTCTTCTAATGTGGCT +
Preference number: 6 (lower is better)
Translates to: IFCPMPCTTNTI*VVCDGLSSNVA
Trigger: AGCCACATTAGAAGACAAGCCATCACAGACTACCCATATTGTATTTGTTGTGCATGGCATTGGGCAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323669.10
ENST00000357758.3
ENST00000395606.5
ENST00000556027.5
ENST00000612692.4
ENST00000673822.2
ENST00000673827.1
ENST00000673930.1
ENST00000674014.1
CDS CCA 72 bp CCAAGTGCCGTCAATAAACCACTGTCCACGCATTACTaGTATTTTATCAGCCTCTTTAGGTTAACTTCTGTA +
Preference number: 6 (lower is better)
Translates to: PSAVNKPLSTHY*YFISLFRLTSV
Trigger: TACAGAAGTTAACCTAAAGAGGCTGATAAAATACCAGTAATGCGTGGACAGTGGTTTATTGACGGCACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556910.1
CDS CAA 72 bp GCACTGCTGTTCAGCATATCCCTTAAACCTCGTACTTaGTCAGGAGTAATGGAATCAACAGTGTCATCTTTT +
Preference number: 6 (lower is better)
Translates to: ALLFSISLKPRT*SGVMESTVSSF
Trigger: AAAAGATGACACTGTTGATTCCATTACTCCTGACAAAGTACGAGGTTTAAGGGATATGCTGAACAGCAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674152.1
CDS CAA 90 bp ATGTCCATTGCACTGCTGTTCAGCATATCCCTTAAACCTCGTACTTaGTCAGGAGTAATGGAATCAACAGTGTCATCTTTTCCATCTATG +
Preference number: 6 (lower is better)
Translates to: MSIALLFSISLKPRT*SGVMESTVSSFPSM
Trigger: CATAGATGGAAAAGATGACACTGTTGATTCCATTACTCCTGACAAAGTACGAGGTTTAAGGGATATGCTGAACAGCAGTGCAATGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674152.1
CDS CAA 72 bp CGGAAAAAGAAGTTGTGGGAGATTAAAGAACGATTCTaGAAGTCTGAAATATGCAGAATCGAGGAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: RKKKLWEIKERF*KSEICRIEEAR
Trigger: TCTGGCTTCCTCGATTCTGCATATTTCAGACTTCAAGAATCGTTCTTTAATCTCCCACAACTTCTTTTTCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612692.4
ENST00000673822.2
CDS CCA 72 bp CAAGTAGGAATGTTCAACCCTATTAATAATTCATCCTaGAGTGGAGTTGACTGTGGAAGAATTATTCAGCCT +
Preference number: 6 (lower is better)
Translates to: QVGMFNPINNSS*SGVDCGRIIQP
Trigger: AGGCTGAATAATTCTTCCACAGTCAACTCCACTCCAGGATGAATTATTAATAGGGTTGAACATTCCTACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555400.1
CDS CAA 72 bp GGAGGTGGTAGACAACATCTTTTCCATCTATGGATTTaGACACTTCAATATCGAAATTTTCCTGCATCTGCT +
Preference number: 6 (lower is better)
Translates to: GGGRQHLFHLWI*TLQYRNFPASA
Trigger: AGCAGATGCAGGAAAATTTCGATATTGAAGTGTCAAAATCCATAGATGGAAAAGATGTTGTCTACCACCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323669.10
CDS CAA 90 bp CAGTGTCCAGAGTCTGGCACAGATATAATTAAATTAAAAATGCTGTaGGCCCAAGTAGGAATGTTCAACCCTATTAATAATTCATCCTGG +
Preference number: 6 (lower is better)
Translates to: QCPESGTDIIKLKML*AQVGMFNPINNSSW
Trigger: CCAGGATGAATTATTAATAGGGTTGAACATTCCTACTTGGGCCAACAGCATTTTTAATTTAATTATATCTGTGCCAGACTCTGGACACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555400.1
CDS CAA 90 bp TATAAACTTCAGGGGGTACTTACCCTAAAGAGATTTGTTTTATGCTaGATGGTTAAGACCTTGTGCCACAAGGCCCTAATTACTAATATT +
Preference number: 6 (lower is better)
Translates to: YKLQGVLTLKRFVLC*MVKTLCHKALITNI
Trigger: AATATTAGTAATTAGGGCCTTGTGGCACAAGGTCTTAACCATCAAGCATAAAACAAATCTCTTTAGGGTAAGTACCCCCTGAAGTTTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555400.1
CDS CAA 90 bp CATAACCTCTATGAAGTCTGGTACCACTACTTGATGATTTATTTTTaGATAATGCTCTCACATCTTTCCCAGGTATCATTCTCTCTTTTC +
Preference number: 6 (lower is better)
Translates to: HNLYEVWYHYLMIYF*IMLSHLSQVSFSLF
Trigger: GAAAAGAGAGAATGATACCTGGGAAAGATGTGAGAGCATTATCAAAAAATAAATCATCAAGTAGTGGTACCAGACTTCATAGAGGTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673827.1
CDS TCA 72 bp GTAAGAAGGTATATATTGATCAGCTGTGATATAAAGTaGACTGGACACAACACCAAAGCCAGAAACCATAAA +
Preference number: 6 (lower is better)
Translates to: VRRYILISCDIK*TGHNTKARNHK
Trigger: TTTATGGTTTCTGGCTTTGGTGTTGTGTCCAGTTCACTTTATATCACAGCTGATCAATATATACCTTCTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556027.5
CDS CAA 72 bp TGGAATCAACAGTGTCATCTTTTCCATCTATGGATTTaGACACTTCAATATCGAAATTTTCCTGCATCTGCT +
Preference number: 6 (lower is better)
Translates to: WNQQCHLFHLWI*TLQYRNFPASA
Trigger: AGCAGATGCAGGAAAATTTCGATATTGAAGTGTCAAAATCCATAGATGGAAAAGATGACACTGTTGATTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674152.1
CDS TCA 72 bp AATAAAAACTGTAAGAAGGTATATATTGATCAGCTGTaGTATAAAGTGAACTGGACACAACACCAAAGCCAG +
Preference number: 6 (lower is better)
Translates to: NKNCKKVYIDQL*YKVNWTQHQSQ
Trigger: CTGGCTTTGGTGTTGTGTCCAGTTCACTTTATATCACAGCTGATCAATATATACCTTCTTACAGTTTTTATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556027.5
CDS TCA 72 bp AACAAGTCAGAAATAGCTGAAATCCATGTGGACTGGTaGGTTAGTAAATGTCTTAATCTTTTGTATTCCATG +
Preference number: 6 (lower is better)
Translates to: NKSEIAEIHVDW*VSKCLNLLYSM
Trigger: CATGGAATACAAAAGATTAAGACATTTACTAACTCACCAGTCCACATGGATTTCAGCTATTTCTGACTTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555621.1