Pregenerated sensors for DCXR-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000264569Ensembl transcript IDs: ENST00000582558.1, ENST00000584705.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCTTTAAAGTGAGCCGGCGGTGTCCTGCTCCCAAGCCTGAGAGATaGTGGGCACAGGCGACACTTTTTAGGACATGCCGATGTTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: GFKVSRRCPAPKPER*WAQATLFRTCRCFQ Trigger: CTGAAAACATCGGCATGTCCTAAAAAGTGTCGCCTGTGCCCATCATCTCTCAGGCTTGGGAGCAGGACACCGCCGGCTCACTTTAAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000582558.1 ENST00000584705.1 |
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| CDS CCA 90 bp | GGGGACCACTACCATCAAGACACGGAGACCAGTAGTGGCCCCGAATaGCTGGGCGCACTGATATTTATTGCATACAAGACAAGGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: GDHYHQDTETSSGPE*LGALIFIAYKTRRA Trigger: TGCCCTCCTTGTCTTGTATGCAATAAATATCAGTGCGCCCAGCCATTCGGGGCCACTACTGGTCTCCGTGTCTTGATGGTAGTGGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584705.1 |
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| CDS TCA 90 bp | TCCAGACGTAGTTGGTTGTCCAAATTCTTTCCCTTGGCTTTAAAGTaGGCCGGCGGTGTCCTGCTCCCAAGCCTGAGAGATGATGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: SRRSWLSKFFPLALK*AGGVLLPSLRDDGH Trigger: GTGCCCATCATCTCTCAGGCTTGGGAGCAGGACACCGCCGGCTCACTTTAAAGCCAAGGGAAAGAATTTGGACAACCAACTACGTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582558.1 ENST00000584705.1 |
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| CDS TCA 90 bp | ATCAAGACACGGAGACCAGTAGTGGCCCCGAATGGCTGGGCGCACTaGTATTTATTGCATACAAGACAAGGAGGGCAGGGTAAGGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: IKTRRPVVAPNGWAH*YLLHTRQGGQGKEG Trigger: ACCCTCCTTACCCTGCCCTCCTTGTCTTGTATGCAATAAATATCAGTGCGCCCAGCCATTCGGGGCCACTACTGGTCTCCGTGTCTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584705.1 |
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| CDS CCA 90 bp | TTTCTTTGTTATACTGAAACAGTTTGTGTCTTCAGTCTCTTGCCTTaGCATCTAGGTAATCCTTCGCCCACAGATGAAAGCGGAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FLCYTETVCVFSLLP*HLGNPSPTDESGAL Trigger: CAGAGCTCCGCTTTCATCTGTGGGCGAAGGATTACCTAGATGCCAAGGCAAGAGACTGAAGACACAAACTGTTTCAGTATAACAAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584705.1 |
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| CDS GCA 90 bp | ATTAACCACACATTCTTTCCGATATTAACCACCACATCGTCTTTTTaGAATAATCTTGGCAGGGAAAAATATGCTAGCCAGGGTCCACTA | + |
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Preference number: 5 (lower is better) Translates to: INHTFFPILTTTSSF*NNLGREKYASQGPL Trigger: TAGTGGACCCTGGCTAGCATATTTTTCCCTGCCAAGATTATTGCAAAAAGACGATGTGGTGGTTAATATCGGAAAGAATGTGTGGTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000584705.1 |
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| CDS TCA 72 bp | GTGAGCCGGCGGTGTCCTGCTCCCAAGCCTGAGAGATaGTGGGCACAGGCGACACTTTTTAGGACATGCCGA | + |
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Preference number: 6 (lower is better) Translates to: VSRRCPAPKPER*WAQATLFRTCR Trigger: TCGGCATGTCCTAAAAAGTGTCGCCTGTGCCCATCATCTCTCAGGCTTGGGAGCAGGACACCGCCGGCTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000582558.1 ENST00000584705.1 |
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| CDS TCA 72 bp | AGTTGGTTGTCCAAATTCTTTCCCTTGGCTTTAAAGTaGGCCGGCGGTGTCCTGCTCCCAAGCCTGAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SWLSKFFPLALK*AGGVLLPSLRD Trigger: ATCTCTCAGGCTTGGGAGCAGGACACCGCCGGCTCACTTTAAAGCCAAGGGAAAGAATTTGGACAACCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582558.1 ENST00000584705.1 |
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| CDS CAA 72 bp | CCTTCGCCCACAGATGAAAGCGGAGCTCTGCTGACATaGGTGTCTTCTCCAGACGTAGTTGGTTGTCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: PSPTDESGALLT*VSSPDVVGCPN Trigger: ATTTGGACAACCAACTACGTCTGGAGAAGACACCAATGTCAGCAGAGCTCCGCTTTCATCTGTGGGCGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582558.1 ENST00000584705.1 |
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| CDS CAA 90 bp | CTAGGTAATCCTTCGCCCACAGATGAAAGCGGAGCTCTGCTGACATaGGTGTCTTCTCCAGACGTAGTTGGTTGTCCAAATTCTTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LGNPSPTDESGALLT*VSSPDVVGCPNSFP Trigger: AGGGAAAGAATTTGGACAACCAACTACGTCTGGAGAAGACACCAATGTCAGCAGAGCTCCGCTTTCATCTGTGGGCGAAGGATTACCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000582558.1 ENST00000584705.1 |
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| CDS CCA 72 bp | TATACTGAAACAGTTTGTGTCTTCAGTCTCTTGCCTTaGCATCTAGGTAATCCTTCGCCCACAGATGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: YTETVCVFSLLP*HLGNPSPTDES Trigger: GCTTTCATCTGTGGGCGAAGGATTACCTAGATGCCAAGGCAAGAGACTGAAGACACAAACTGTTTCAGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584705.1 |
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| CDS CAA 90 bp | GCCTATTTTCTTTGTTATACTGAAACAGTTTGTGTCTTCAGTCTCTaGCCTTGGCATCTAGGTAATCCTTCGCCCACAGATGAAAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: AYFLCYTETVCVFSL*PWHLGNPSPTDESG Trigger: TCCGCTTTCATCTGTGGGCGAAGGATTACCTAGATGCCAAGGCAAGAGACTGAAGACACAAACTGTTTCAGTATAACAAAGAAAATAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584705.1 |
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| CDS GCA 72 bp | ACATTCTTTCCGATATTAACCACCACATCGTCTTTTTaGAATAATCTTGGCAGGGAAAAATATGCTAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TFFPILTTTSSF*NNLGREKYASQ Trigger: CTGGCTAGCATATTTTTCCCTGCCAAGATTATTGCAAAAAGACGATGTGGTGGTTAATATCGGAAAGAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000584705.1 |
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