RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCUN1D5 (Homo sapiens)

Ensembl gene IDs: ENSG00000137692

Ensembl transcript IDs: ENST00000260247.10, ENST00000525420.1, ENST00000527260.5, ENST00000527576.5, ENST00000527779.1, ENST00000529076.1, ENST00000529281.5, ENST00000529294.5, ENST00000531543.1, ENST00000531571.5, ENST00000583974.1

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCACATAGTCACTAAGAAGCAAAGGACTCTGAACACAGATCTCTaGACTCCAAACCCAGGGCTCTTTCCAGCCTTCCTTACTAGTCTC +
Preference number: 1 (lower is better)
Translates to: GHIVTKKQRTLNTDL*TPNPGLFPAFLTSL
Trigger: GAGACTAGTAAGGAAGGCTGGAAAGAGCCCTGGGTTTGGAGTTCAGAGATCTGTGTTCAGAGTCCTTTGCTTCTTAGTGACTATGTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CCA 90 bp CAGTGTACATGCTACTTAATAGTAATCCTATCCTCACACACTCTCTaGGCCCCTTCCTCAACTTACTTTCCCCATATAACCTTGTCACCA +
Preference number: 1 (lower is better)
Translates to: QCTCYLIVILSSHTL*APSSTYFPHITLSP
Trigger: TGGTGACAAGGTTATATGGGGAAAGTAAGTTGAGGAAGGGGCCCAGAGAGTGTGTGAGGATAGGATTACTATTAAGTAGCATGTACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 90 bp GTCAGGCCAGCACACAATACACCGTTTTCATCACACACTGTCACCTaGATCCCTGGCAATTTCCTAGAGGTATTAACATCATACCTTATT +
Preference number: 1 (lower is better)
Translates to: VRPAHNTPFSSHTVT*IPGNFLEVLTSYLI
Trigger: AATAAGGTATGATGTTAATACCTCTAGGAAATTGCCAGGGATTCAGGTGACAGTGTGTGATGAAAACGGTGTATTGTGTGCTGGCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 90 bp ATCATGTATTCTGAATCTGTGCTATTCCACATACCTTGTATGCCTTaGAAACTCTGGAGTTATCTCAGAATTTACTCCCACCCCGACCCC +
Preference number: 1 (lower is better)
Translates to: IMYSESVLFHIPCMP*KLWSYLRIYSHPDP
Trigger: GGGGTCGGGGTGGGAGTAAATTCTGAGATAACTCCAGAGTTTTCAAGGCATACAAGGTATGTGGAATAGCACAGATTCAGAATACATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 90 bp GAACCTCATTCCAGAAGGTTCCATTTCATGTCAAACTTCTCAAACTaGCGTAAGCCAGATAGAGAGAACCTCCCAATTTCCACATCTATG +
Preference number: 1 (lower is better)
Translates to: EPHSRRFHFMSNFSN*RKPDRENLPISTSM
Trigger: CATAGATGTGGAAATTGGGAGGTTCTCTCTATCTGGCTTACGTCAGTTTGAGAAGTTTGACATGAAATGGAACCTTCTGGAATGAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 90 bp GCAAATCATTATCCCAGAAGTCAAGGCCAACAGTCTTCCAAATTGTaGAGAGATGACTATAATGAGCCATACCATCAGCAGACTATGTTG +
Preference number: 1 (lower is better)
Translates to: ANHYPRSQGQQSSKL*RDDYNEPYHQQTML
Trigger: CAACATAGTCTGCTGATGGTATGGCTCATTATAGTCATCTCTGCACAATTTGGAAGACTGTTGGCCTTGACTTCTGGGATAATGATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 90 bp TATGTATCATGTATTCTGAATCTGTGCTATTCCACATACCTTGTATaGCTTGAAAACTCTGGAGTTATCTCAGAATTTACTCCCACCCCG +
Preference number: 1 (lower is better)
Translates to: YVSCILNLCYSTYLV*LENSGVISEFTPTP
Trigger: CGGGGTGGGAGTAAATTCTGAGATAACTCCAGAGTTTTCAAGGCATACAAGGTATGTGGAATAGCACAGATTCAGAATACATGATACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 90 bp CTAAAAGTAGGAGCATTTTTCCAATACCTAGAAATGTTTATTAGCTaGATCAGCAAATCATTATCCCAGAAGTCAAGGCCAACAGTCTTC +
Preference number: 1 (lower is better)
Translates to: LKVGAFFQYLEMFIS*ISKSLSQKSRPTVF
Trigger: GAAGACTGTTGGCCTTGACTTCTGGGATAATGATTTGCTGATGCAGCTAATAAACATTTCTAGGTATTGGAAAAATGCTCCTACTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 90 bp TTAGCAAGCTGCAATACTACCAACGTAAATGGCTCTATTGAGTTGTaGACAATTAATTATACCCAGAGTTCTCTCATGATTCCTTATTCT +
Preference number: 1 (lower is better)
Translates to: LASCNTTNVNGSIEL*TINYTQSSLMIPYS
Trigger: AGAATAAGGAATCATGAGAGAACTCTGGGTATAATTAATTGTGCACAACTCAATAGAGCCATTTACGTTGGTAGTATTGCAGCTTGCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 90 bp CTTCTCTCTACTCAAACAATGACACTAGAAATGTTTCTGAAGTTGTaGCTGGGCTATGAATATGAACAAAGTTTTCATATCACTGGGATA +
Preference number: 1 (lower is better)
Translates to: LLSTQTMTLEMFLKL*LGYEYEQSFHITGI
Trigger: TATCCCAGTGATATGAAAACTTTGTTCATATTCATAGCCCAGTCACAACTTCAGAAACATTTCTAGTGTCATTGTTTGAGTAGAGAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCCGCACGAGAATCTCTTaGACCCAGGAGGTCGAGGCT +
Preference number: 2 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGRTRIS*TQEVEA
Trigger: AGCCTCGACCTCCTGGGTTCAAGAGATTCTCGTGCG...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGGTGGGTGGGATCACTTaGGGGCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPVGGIT*GQEFET
Trigger: GGTCTCAAACTCCTGCCCTCAAGTGATCCCACCCAC...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CCA 90 bp GCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAATTTTTCCATTCCTTCTaGCCCTACAACTTCATCAGG +
Preference number: 2 (lower is better)
Translates to: APGTGKILKTVAMSSQAEFFHSF*PYNFIR
Trigger: CCTGATGAAGTTGTAGGGCCAGAAGGAATGGAAAAA...TTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR TCA 90 bp ACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACACAGGCACTTCTTGCTTaGAAAATGTTCCTCTCCACT +
Preference number: 2 (lower is better)
Translates to: TGKILKTVAMSSQAEELTQALLA*KMFLST
Trigger: AGTGGAGAGGAACATTTTTCAAGCAAGAAGTGCCTG...TGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR CCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGTTTGGGAGTCTGAGGTaGGTGGGATCACTTGAGGGC +
Preference number: 2 (lower is better)
Translates to: LTGFNIHICGGRPSISNLFGSLR*VGSLEG
Trigger: GCCCTCAAGTGATCCCACCCACCTCAGACTCCCAAA...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp GCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAAGTCTTTCATATGAATaGAAATGCACCCGTTGGATT +
Preference number: 2 (lower is better)
Translates to: APGTGKILKTVAMSSQAESLSYE*KCTRWI
Trigger: AATCCAACGGGTGCATTTTCATTCATATGAAAGACT...TTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
3UTR-3UTR TCA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCCAGGCACTTCTTGCTTaGAAAATGTTCCTCTCCACT +
Preference number: 2 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSQALLA*KMFLST
Trigger: AGTGGAGAGGAACATTTTTCAAGCAAGAAGTGCCTG...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR GCA 90 bp ACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACAAAGCCAGGCACTTCTTaGTTGAAAAATGTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: TGKILKTVAMSSQAEELTKPGTS*LKNVPL
Trigger: GAGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTT...TGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR CCA 90 bp GCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAATTACTAAGATCAGCATaGACTGTTCTGCTGAATTCT +
Preference number: 2 (lower is better)
Translates to: APGTGKILKTVAMSSQAELLRSA*TVLLNS
Trigger: AGAATTCAGCAGAACAGTCCATGCTGATCTTAGTAA...TTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR CCA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAATTTTTCCATTCCTTCTaGCCCTACAACTTCATCAGG +
Preference number: 2 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQFFHSF*PYNFIR
Trigger: CCTGATGAAGTTGTAGGGCCAGAAGGAATGGAAAAA...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR CAA 90 bp TCAGCAAATCATTATCCCAGAAGTCAAGGCCAACAGTCTTCCAAATaGTGCAGAGATGACTATAATGAGCCATACCATCAGCAGACTATG +
Preference number: 2 (lower is better)
Translates to: SANHYPRSQGQQSSK*CRDDYNEPYHQQTM
Trigger: CATAGTCTGCTGATGGTATGGCTCATTATAGTCATCTCTGCACAATTTGGAAGACTGTTGGCCTTGACTTCTGGGATAATGATTTGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CAA 90 bp CCAGTACTACTTAAACGTAAGTTTTATTCAGTTCTGCAAATGCTTTaGACAACCTACCATGAGTCAGGCACCATGCTGAGAGCTGAAGAC +
Preference number: 2 (lower is better)
Translates to: PVLLKRKFYSVLQML*TTYHESGTMLRAED
Trigger: GTCTTCAGCTCTCAGCATGGTGCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACGTTTAAGTAGTACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTATATACACGTGGGAATTaGAAGGTTTGCATTTTCTTC +
Preference number: 2 (lower is better)
Translates to: GTGKILKTVAMSSQAEELYTRGN*KVCIFF
Trigger: GAAGAAAATGCAAACCTTTCAATTCCCACGTGTATA...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
3UTR-3UTR GCA 90 bp GCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAACTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT +
Preference number: 2 (lower is better)
Translates to: APGTGKILKTVAMSSQAELIFIP*KIKGIS
Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...TTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR CCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGCAAGCGTGGCCTCAGTaGTACTGGACTCCAAAGTAT +
Preference number: 2 (lower is better)
Translates to: LTGFNIHICGGRPSISNLQAWPQ*YWTPKY
Trigger: ATACTTTGGAGTCCAGTACCACTGAGGCCACGCTTG...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGAGAGTAAAGCAAGCGTaGCCTCAGTGGTACTGGACT +
Preference number: 2 (lower is better)
Translates to: VFHPVQREVVLKILQQGSRVKQA*PQWYWT
Trigger: AGTCCAGTACCACTGAGGCCACGCTTGCTTTACTCT...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACATATACACGTGGGAATTaGAAGGTTTGCATTTTCTTC +
Preference number: 2 (lower is better)
Translates to: WDTGWFEKECTNRPAASTYTRGN*KVCIFF
Trigger: GAAGAAAATGCAAACCTTTCAATTCCCACGTGTATA...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp TTTCTTCACATAGTTCTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAATCTTGCTATGATGTCTaGCGGACTTTTTGCCACTCA +
Preference number: 2 (lower is better)
Translates to: FLHIVLAMMSDGLFATQQSCYDV*RTFCHS
Trigger: TGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGA...TTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGAACTATGTGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
3UTR-3UTR GCA 90 bp CACATAGTTCTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATAGAGGTGTGGCTCAATaGCCATCACATGTAACAAGA +
Preference number: 2 (lower is better)
Translates to: HIVLAMMSDGLFATQQIHRGVAQ*PSHVTR
Trigger: TCTTGTTACATGTGATGGGCATTGAGCCACACCTCT...ATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGAACTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
3UTR-3UTR CCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTGTAATCCCAGCTACTTaGGAGGTTGACGCACGAGAA +
Preference number: 2 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVVIPAT*EVDARE
Trigger: TTCTCGTGCGTCAACCTCCCAAGTAGCTGGGATTAC...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CAA 90 bp TTATTTTTCTCTTGGGAACAGAGTAAACTGTTGTACACCTGCATTTaGACTGTGACCCATCATATGAGGTCAGGTGTGGAATTTTCCACT +
Preference number: 2 (lower is better)
Translates to: LFFSWEQSKLLYTCI*TVTHHMRSGVEFST
Trigger: AGTGGAAAATTCCACACCTGACCTCATATGATGGGTCACAGTCAAAATGCAGGTGTACAACAGTTTACTCTGTTCCCAAGAGAAAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CCA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTTACTAAGATCAGCATaGACTGTTCTGCTGAATTCT +
Preference number: 2 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSLLRSA*TVLLNS
Trigger: AGAATTCAGCAGAACAGTCCATGCTGATCTTAGTAA...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR TCA 90 bp TTTCTTCACATAGTTCTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAACATGGACTGTTCTGCTaGATTCTAATACATTGTACC +
Preference number: 2 (lower is better)
Translates to: FLHIVLAMMSDGLFATQQHGLFC*ILIHCT
Trigger: GGTACAATGTATTAGAATTCAGCAGAACAGTCCATG...TTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGAACTATGTGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
3UTR-3UTR GCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCCAGTCTTCCAAATTGTaGAGAGATGACTATAATGAG +
Preference number: 2 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGQSSKL*RDDYNE
Trigger: CTCATTATAGTCATCTCTGCACAATTTGGAAGACTG...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR GCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGCTAACACCACTGGTATaGTCAGTTCATAACTCAGTG +
Preference number: 2 (lower is better)
Translates to: LTGFNIHICGGRPSISNLLTPLV*SVHNSV
Trigger: CACTGAGTTATGAACTGAGCATACCAGTGGTGTTAG...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCTGTCCAATCAACATCTaGCTCTACTTTCTCCCAGTA +
Preference number: 2 (lower is better)
Translates to: AINSHLWTIEPKINATKLCPINI*LYFLPV
Trigger: TACTGGGAGAAAGTAGAGCCAGATGTTGATTGGACA...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCCACACCAATAACAACTaGTCAGGAAAAGGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: AINSHLWTIEPKINATKLHTNNN*SGKGAK
Trigger: CTTTGCTCCTTTTCCTGACCAGTTGTTATTGGTGTG...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGAGTCTTTCATATGAATaGAAATGCACCCGTTGGATT +
Preference number: 2 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPSLSYE*KCTRWI
Trigger: AATCCAACGGGTGCATTTTCATTCATATGAAAGACT...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp TTTCTTCACATAGTTCTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAAGTCTTTCATATGAATaGAAATGCACCCGTTGGATT +
Preference number: 2 (lower is better)
Translates to: FLHIVLAMMSDGLFATQQSLSYE*KCTRWI
Trigger: AATCCAACGGGTGCATTTTCATTCATATGAAAGACT...TTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGAACTATGTGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
3UTR-3UTR TCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGCCCAGAGTTCTCTCATaGTTCCTTATTCTATTGTCT +
Preference number: 2 (lower is better)
Translates to: VFHPVQREVVLKILQQGSPRVLS*FLILLS
Trigger: AGACAATAGAATAAGGAATCATGAGAGAACTCTGGG...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp TTTCTTCACATAGTTCTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATATCAAGGCTTCTCTaGTCTTTATCCCTTGCAAAA +
Preference number: 2 (lower is better)
Translates to: FLHIVLAMMSDGLFATQQISRLL*SLSLAK
Trigger: TTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATAT...TTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGAACTATGTGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
3UTR-3UTR TCA 90 bp CTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATCAAGAAGAAATATCAAGGCTTCTCTaGTCTTTATCCCTTGCAAAA +
Preference number: 2 (lower is better)
Translates to: LAMMSDGLFATQQIHQEEISRLL*SLSLAK
Trigger: TTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATAT...TTCTTCTTGATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR GCA 90 bp CACATAGTTCTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATAACTTCATCAGGACCTaGATATTCATAAAACCAAGC +
Preference number: 2 (lower is better)
Translates to: HIVLAMMSDGLFATQQIHNFIRT*IFIKPS
Trigger: GCTTGGTTTTATGAATATGCAGGTCCTGATGAAGTT...ATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGAACTATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR GCA 90 bp CTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATCAAGAAGAAAACTTCATCAGGACCTaGATATTCATAAAACCAAGC +
Preference number: 2 (lower is better)
Translates to: LAMMSDGLFATQQIHQEENFIRT*IFIKPS
Trigger: GCTTGGTTTTATGAATATGCAGGTCCTGATGAAGTT...TTCTTCTTGATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR CCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGCACTGGGATACTGGATaGTTTGAAAAGGAATGTACA +
Preference number: 2 (lower is better)
Translates to: LTGFNIHICGGRPSISNLHWDTG*FEKECT
Trigger: TGTACATTCCTTTTCAAACCATCCAGTATCCCAGTG...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGGGAATTTTCCACTTGTaGCATCATGTCAACACTCAA +
Preference number: 2 (lower is better)
Translates to: LTGFNIHICGGRPSISNLGIFHL*HHVNTQ
Trigger: TTGAGTGTTGACATGATGCCACAAGTGGAAAATTCC...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTAAACCAAACATGGATTaGAAATACAGTATTCCCGGG +
Preference number: 2 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVKPNMD*KYSIPG
Trigger: CCCGGGAATACTGTATTTTCAATCCATGTTTGGTTT...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGGACACAGCAAATGTATaGTCGATCAGTTTTAAGACT +
Preference number: 2 (lower is better)
Translates to: LTGFNIHICGGRPSISNLDTANV*SISFKT
Trigger: AGTCTTAAAACTGATCGATCATACATTTGCTGTGTC...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGTCACTACAGTCACACTaGTCTCTTTACTGTTTCTTT +
Preference number: 2 (lower is better)
Translates to: LTGFNIHICGGRPSISNLSLQSH*SLYCFF
Trigger: AAAGAAACAGTAAAGAGATCAGTGTGACTGTAGTGA...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGATTCCAAGAATAAAGTaGCACTCCCTCCTCAATTTA +
Preference number: 2 (lower is better)
Translates to: LTGFNIHICGGRPSISNLIPRIK*HSLLNL
Trigger: TAAATTGAGGAGGGAGTGTCACTTTATTCTTGGAAT...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCTGTCTCCCACTATTATaGGTGTTTCAGAAAACTGTA +
Preference number: 2 (lower is better)
Translates to: AINSHLWTIEPKINATKLCLPLL*VFQKTV
Trigger: TACAGTTTTCTGAAACACCCATAATAGTGGGAGACA...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTCAGAAGAACAACACCTaGCATTCTTACCAATTACAC +
Preference number: 2 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVQKNNT*HSYQLH
Trigger: GTGTAATTGGTAAGAATGCCAGGTGTTGTTCTTCTG...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR TCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTCACAAAAGTTGGCCTTaGATTTCATCGATCATATGT +
Preference number: 2 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVHKSWP*ISSIIC
Trigger: ACATATGATCGATGAAATTCAAGGCCAACTTTTGTG...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR GCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCTGTATTCTGAATCTGTaGTATTCCACATACCTTGTA +
Preference number: 2 (lower is better)
Translates to: AINSHLWTIEPKINATKLCILNL*YSTYLV
Trigger: TACAAGGTATGTGGAATAGCACAGATTCAGAATACA...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 72 bp TTCCCGGGATGCGACACCTACATACACGGGGAGGGCTaGCTTTTTATACAGGCAGGTTCCACAGGGATGACT +
Preference number: 3 (lower is better)
Translates to: FPGCDTYIHGEG*LFIQAGSTGMT
Trigger: AGTCATCCCTGTGGAACCTGCCTGTATAAAAAGTCAGCCCTCCCCGTGTATGTAGGTGTCGCATCCCGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 72 bp TTCTGCCTGGAATGCTCTCCTCCCAGATATCCACACTaGACAACCATTCACCTCCTCAGGCCTCTGCTCAAT +
Preference number: 3 (lower is better)
Translates to: FCLECSPPRYPH*TTIHLLRPLLN
Trigger: ATTGAGCAGAGGCCTGAGGAGGTGAATGGTTGTGCAGTGTGGATATCTGGGAGGAGAGCATTCCAGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 72 bp GTAAACTCTCAATCTACCCGCTTAAGCCTGCTCCTCTaGGTCTTCGCCATCTTATTAATGCCCACTTCATTC +
Preference number: 3 (lower is better)
Translates to: VNSQSTRLSLLL*VFAILLMPTSF
Trigger: GAATGAAGTGGGCATTAATAAGATGGCGAAGACTCAGAGGAGCAGGCTTAAGCGGGTAGATTGAGAGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 72 bp CCCAGACCTCTACTTTTCCAGGTTCAAATATCCAACTaGCCACTCTACATTTTCCTTTGGACGTCTGACAGA +
Preference number: 3 (lower is better)
Translates to: PRPLLFQVQISN*PLYIFLWTSDR
Trigger: TCTGTCAGACGTCCAAAGGAAAATGTAGAGTGGGCAGTTGGATATTTGAACCTGGAAAAGTAGAGGTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 72 bp TATCCCAGAAGTCAAGGCCAACAGTCTTCCAAATTGTaGAGAGATGACTATAATGAGCCATACCATCAGCAG +
Preference number: 3 (lower is better)
Translates to: YPRSQGQQSSKL*RDDYNEPYHQQ
Trigger: CTGCTGATGGTATGGCTCATTATAGTCATCTCTGCACAATTTGGAAGACTGTTGGCCTTGACTTCTGGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 72 bp AACAGGCCTGCTGCTAGTACAAAAGTGCCTTTTACATaGATTAGGAAAGCCTTCCCTTTCCTCAAGACACTT +
Preference number: 3 (lower is better)
Translates to: NRPAASTKVPFT*IRKAFPFLKTL
Trigger: AAGTGTCTTGAGGAAAGGGAAGGCTTTCCTAATTCATGTAAAAGGCACTTTTGTACTAGCAGCAGGCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 72 bp GCACACAATACACCGTTTTCATCACACACTGTCACCTaGATCCCTGGCAATTTCCTAGAGGTATTAACATCA +
Preference number: 3 (lower is better)
Translates to: AHNTPFSSHTVT*IPGNFLEVLTS
Trigger: TGATGTTAATACCTCTAGGAAATTGCCAGGGATTCAGGTGACAGTGTGTGATGAAAACGGTGTATTGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 72 bp TCCAGAAGGTTCCATTTCATGTCAAACTTCTCAAACTaGCGTAAGCCAGATAGAGAGAACCTCCCAATTTCC +
Preference number: 3 (lower is better)
Translates to: SRRFHFMSNFSN*RKPDRENLPIS
Trigger: GGAAATTGGGAGGTTCTCTCTATCTGGCTTACGTCAGTTTGAGAAGTTTGACATGAAATGGAACCTTCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 72 bp AGGAATGTACAAACAGGCCTGCTGCTAGTACAAAAGTaGCTTTTACATGAATTAGGAAAGCCTTCCCTTTCC +
Preference number: 3 (lower is better)
Translates to: RNVQTGLLLVQK*LLHELGKPSLS
Trigger: GGAAAGGGAAGGCTTTCCTAATTCATGTAAAAGGCACTTTTGTACTAGCAGCAGGCCTGTTTGTACATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 72 bp CTCAGGCCTCTGCTCAATGTCACATATCAGTGTACATaGTACTTAATAGTAATCCTATCCTCACACACTCTC +
Preference number: 3 (lower is better)
Translates to: LRPLLNVTYQCT*YLIVILSSHTL
Trigger: GAGAGTGTGTGAGGATAGGATTACTATTAAGTAGCATGTACACTGATATGTGACATTGAGCAGAGGCCTGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 72 bp ACCTATTATGTGGTGGAAACAAGTGAGGAACACCTATaGATAACATGGTCTCTGTTCACAGAGCTGTTTCCT +
Preference number: 3 (lower is better)
Translates to: TYYVVETSEEHL*ITWSLFTELFP
Trigger: AGGAAACAGCTCTGTGAACAGAGACCATGTTATTCATAGGTGTTCCTCACTTGTTTCCACCACATAATAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 72 bp CCATATTATCTTCCTACTACTACCTGCTTCCATCCTTaGTTTGATCTGAATCCTAATTGCTTGCTAGCTCAC +
Preference number: 3 (lower is better)
Translates to: PYYLPTTTCFHP*FDLNPNCLLAH
Trigger: GTGAGCTAGCAAGCAATTAGGATTCAGATCAAAGCAAGGATGGAAGCAGGTAGTAGTAGGAAGATAATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 72 bp TTTTTCTCTTGGGAACAGAGTAAACTGTTGTACACCTaGATTTTGACTGTGACCCATCATATGAGGTCAGGT +
Preference number: 3 (lower is better)
Translates to: FFSWEQSKLLYT*ILTVTHHMRSG
Trigger: ACCTGACCTCATATGATGGGTCACAGTCAAAATGCAGGTGTACAACAGTTTACTCTGTTCCCAAGAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CCA 72 bp GTTCAAATATCCAACTGCCCACTCTACATTTTCCTTTaGACGTCTGACAGACAAGTCTACCATAACATATCC +
Preference number: 3 (lower is better)
Translates to: VQISNCPLYIFL*TSDRQVYHNIS
Trigger: GGATATGTTATGGTAGACTTGTCTGTCAGACGTCCAAAGGAAAATGTAGAGTGGGCAGTTGGATATTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CAA 90 bp ACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTAGCATCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC +
Preference number: 3 (lower is better)
Translates to: TENSGHVLPSRRANIDLASDLYP*QNQRHI
Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...TGCTAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR CAA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGGGCCTAGAATACTTCTaGGCATATAGTAGATGCTTG +
Preference number: 3 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPGLEYF*AYSRCL
Trigger: CAAGCATCTACTATATGCCAAGAAGTATTCTAGGCC...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CAA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGAGTAAAGTCCTACTCTaGAGAAAGGGCTATAATGCC +
Preference number: 3 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPSKVLL*RKGYNA
Trigger: GGCATTATAGCCCTTTCTCAAGAGTAGGACTTTACT...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CAA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC +
Preference number: 3 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSSDLYP*QNQRHI
Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR TCA 72 bp TCTGAATCTGTGCTATTCCACATACCTTGTATGCCTTaGAAACTCTGGAGTTATCTCAGAATTTACTCCCAC +
Preference number: 3 (lower is better)
Translates to: SESVLFHIPCMP*KLWSYLRIYSH
Trigger: GTGGGAGTAAATTCTGAGATAACTCCAGAGTTTTCAAGGCATACAAGGTATGTGGAATAGCACAGATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 72 bp CACCTGGATTTACCATATTATCTTCCTACTACTACCTaGTTCCATCCTTGCTTTGATCTGAATCCTAATTGC +
Preference number: 3 (lower is better)
Translates to: HLDLPYYLPTTT*FHPCFDLNPNC
Trigger: GCAATTAGGATTCAGATCAAAGCAAGGATGGAAGCAGGTAGTAGTAGGAAGATAATATGGTAAATCCAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CAA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCGCTATTCCACATACCTaGTATGCCTTGAAAACTCTG +
Preference number: 3 (lower is better)
Translates to: AINSHLWTIEPKINATKLAIPHT*YALKTL
Trigger: CAGAGTTTTCAAGGCATACAAGGTATGTGGAATAGC...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CAA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCACTCTTAATCTCAAATaGTACCATTTGTCACCTGGA +
Preference number: 3 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGTLNLK*YHLSPG
Trigger: TCCAGGTGACAAATGGTACAATTTGAGATTAAGAGT...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CAA 90 bp AATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTATCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC +
Preference number: 3 (lower is better)
Translates to: NTENSGHVLPSRRANIDLSDLYP*QNQRHI
Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...TAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR-3UTR CAA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCCAAGCCAGGCACTTCTaGCTTGAAAAATGTTCCTCT +
Preference number: 3 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHIQARHF*LEKCSS
Trigger: AGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTTG...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR GCA 72 bp GGAGCATTTTTCCAATACCTAGAAATGTTTATTAGCTaGATCAGCAAATCATTATCCCAGAAGTCAAGGCCA +
Preference number: 3 (lower is better)
Translates to: GAFFQYLEMFIS*ISKSLSQKSRP
Trigger: TGGCCTTGACTTCTGGGATAATGATTTGCTGATGCAGCTAATAAACATTTCTAGGTATTGGAAAAATGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CCA 72 bp AAGTACACTTCTTTAAGAGGGCAGAAGAACAACACCTaGCATTCTTACCAATTACACCTCAAACTGAACATA +
Preference number: 3 (lower is better)
Translates to: KYTSLRGQKNNT*HSYQLHLKLNI
Trigger: TATGTTCAGTTTGAGGTGTAATTGGTAAGAATGCCAGGTGTTGTTCTTCTGCCCTCTTAAAGAAGTGTACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CAA 90 bp CTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATCAAGAAGAAGTATACACGTGGGAATaGAAAGGTTTGCATTTTCTT +
Preference number: 3 (lower is better)
Translates to: LAMMSDGLFATQQIHQEEVYTWE*KGLHFL
Trigger: AAGAAAATGCAAACCTTTCAATTCCCACGTGTATAC...TTCTTCTTGATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
3UTR-3UTR CAA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGCAACTTATCCAAGGTTaGGGGCAGAAATTCATCTTT +
Preference number: 3 (lower is better)
Translates to: LTGFNIHICGGRPSISNLQLIQG*GQKFIF
Trigger: AAAGATGAATTTCTGCCCCAAACCTTGGATAAGTTG...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CAA 90 bp CTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATCAAGAAGAATCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC +
Preference number: 3 (lower is better)
Translates to: LAMMSDGLFATQQIHQEESDLYP*QNQRHI
Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...TTCTTCTTGATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
3UTR TCA 72 bp TCCCTAAAATGCTATTATTGTTCACTACAGTCACACTaGTCTCTTTACTGTTTCTTTACACTCTGTACCAGC +
Preference number: 3 (lower is better)
Translates to: SLKCYYCSLQSH*SLYCFFTLCTS
Trigger: GCTGGTACAGAGTGTAAAGAAACAGTAAAGAGATCAGTGTGACTGTAGTGAACAATAATAGCATTTTAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 72 bp AAGCAAGCCTGCCCTCTAGTGCTAAAACTGTCAAATTaGATTGGAATAGCAATTTCCAACAATGAGAAAAAG +
Preference number: 3 (lower is better)
Translates to: KQACPLVLKLSN*IGIAISNNEKK
Trigger: CTTTTTCTCATTGTTGGAAATTGCTATTCCAATTCAATTTGACAGTTTTAGCACTAGAGGGCAGGCTTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CCA 72 bp TCATCGATCATATGTCTTCAATTAAGTTCTATCCTCTaGCTACACTTACTCTCTAAGTGGTTTCATCCATGT +
Preference number: 3 (lower is better)
Translates to: SSIICLQLSSIL*LHLLSKWFHPC
Trigger: ACATGGATGAAACCACTTAGAGAGTAAGTGTAGCCAGAGGATAGAACTTAATTGAAGACATATGATCGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CCA 72 bp GTTTCTGCCCTCAAGAATCTCAGTCTAATGGGAATGTaGATATGTAAACGTTTTACAGACATATGTGTACAA +
Preference number: 3 (lower is better)
Translates to: VSALKNLSLMGM*ICKRFTDICVQ
Trigger: TTGTACACATATGTCTGTAAAACGTTTACATATCCACATTCCCATTAGACTGAGATTCTTGAGGGCAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CAA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCGTATACACGTGGGAATaGAAAGGTTTGCATTTTCTT +
Preference number: 3 (lower is better)
Translates to: AINSHLWTIEPKINATKLVYTWE*KGLHFL
Trigger: AAGAAAATGCAAACCTTTCAATTCCCACGTGTATAC...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR-3UTR CAA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTCATCAGCAGACTATGTaGCCAAATATTAAGACTGTT +
Preference number: 3 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVHQQTM*PNIKTV
Trigger: AACAGTCTTAATATTTGGCAACATAGTCTGCTGATG...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR TCA 72 bp TCATTCATTAAATACCTATTATGTGGTGGAAACAAGTaGGGAACACCTATGAATAACATGGTCTCTGTTCAC +
Preference number: 3 (lower is better)
Translates to: SFIKYLLCGGNK*GTPMNNMVSVH
Trigger: GTGAACAGAGACCATGTTATTCATAGGTGTTCCTCACTTGTTTCCACCACATAATAGGTATTTAATGAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 72 bp TGCAATACTACCAACGTAAATGGCTCTATTGAGTTGTaGACAATTAATTATACCCAGAGTTCTCTCATGATT +
Preference number: 3 (lower is better)
Translates to: CNTTNVNGSIEL*TINYTQSSLMI
Trigger: AATCATGAGAGAACTCTGGGTATAATTAATTGTGCACAACTCAATAGAGCCATTTACGTTGGTAGTATTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR GCA 72 bp TGTATTCTGAATCTGTGCTATTCCACATACCTTGTATaGCTTGAAAACTCTGGAGTTATCTCAGAATTTACT +
Preference number: 3 (lower is better)
Translates to: CILNLCYSTYLV*LENSGVISEFT
Trigger: AGTAAATTCTGAGATAACTCCAGAGTTTTCAAGGCATACAAGGTATGTGGAATAGCACAGATTCAGAATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp ACACTCGAACACGAGGTCGGGTCGGGCGCGGAGACTCGCGGTGTTCGGCACCTATCCGTCTTCCGCTACTaGTGCTGCCACCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TLEHEVGSGAETRGVRHLSVFRY*CCHPRG
Trigger: TCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGACGGA...TAGGTGCCGAACACCGCGAGTCTCCGCGCCCGACCCGACCTCGTGTTCGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531571.5
CDS-3UTR CCA 90 bp ACACTCGAACACGAGGTCGGGTCGGGCGCGGAGACTCGCGGTGTTCGGCACCTAGGGAAGCTTGAAGGGTaGGGGGAGATGGTACCTGGA +
Preference number: 4 (lower is better)
Translates to: TLEHEVGSGAETRGVRHLGKLEG*GEMVPG
Trigger: TCCAGGTACCATCTCCCCCCACCCTTCAAGCTTCCC...TAGGTGCCGAACACCGCGAGTCTCCGCGCCCGACCCGACCTCGTGTTCGAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531571.5
CDS-3UTR TCA 90 bp CACACTCGAACACGAGGTCGGGTCGGGCGCGGAGACTCGCGGTGTTCGGCACCTCAGGCACTTCTTGCTTaGAAAATGTTCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: HTRTRGRVGRGDSRCSAPQALLA*KMFLST
Trigger: AGTGGAGAGGAACATTTTTCAAGCAAGAAGTGCCTG...AGGTGCCGAACACCGCGAGTCTCCGCGCCCGACCCGACCTCGTGTTCGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531571.5
CDS-3UTR CCA 90 bp GCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGGGGTCCCTGTCCGCTaGAAGCCCCTCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: APGTGKILKTVAMSSQAEGVPVR*KPLSAG
Trigger: GCCAGCGCTGAGGGGCTTCCAGCGGACAGGGACCCC...TTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CCA 90 bp ACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTAGCAGGGGTCCCTGTCCGCTaGAAGCCCCTCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TENSGHVLPSRRANIDLAGVPVR*KPLSAG
Trigger: GCCAGCGCTGAGGGGCTTCCAGCGGACAGGGACCCC...TGCTAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCGGGGTCCCTGTCCGCTaGAAGCCCCTCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSGVPVR*KPLSAG
Trigger: GCCAGCGCTGAGGGGCTTCCAGCGGACAGGGACCCC...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp ACACTCGAACACGAGGTCGGGTCGGGCGCGGAGACTCGCGGTGTTCGGCACCTAAGTCTTTCATATGAATaGAAATGCACCCGTTGGATT +
Preference number: 4 (lower is better)
Translates to: TLEHEVGSGAETRGVRHLSLSYE*KCTRWI
Trigger: AATCCAACGGGTGCATTTTCATTCATATGAAAGACT...TAGGTGCCGAACACCGCGAGTCTCCGCGCCCGACCCGACCTCGTGTTCGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531571.5
CDS-3UTR GCA 90 bp AGTCTCTCCATAAACGCCAGCGTGCACACACTCGAACACGAGGTCGGGTCGGGCCAGGGGGTTGGGATCTaGAATAGATATGCATCTGTT +
Preference number: 4 (lower is better)
Translates to: SLSINASVHTLEHEVGSGQGVGI*NRYASV
Trigger: AACAGATGCATATCTATTGCAGATCCCAACCCCCTG...GCCCGACCCGACCTCGTGTTCGAGTGTGTGCACGCTGGCGTTTATGGAGAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531571.5
CDS-3UTR CCA 90 bp GCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAAGCCCCTCAGCGCTaGCACCCAGTTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: APGTGKILKTVAMSSQAEEAPQR*HPVPRD
Trigger: GTCTCTGGGAACTGGGTGCCAGCGCTGAGGGGCTTC...TTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CCA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCGGGGTCCCTGTCCGCTaGAAGCCCCTCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSGVPVR*KPLSAG
Trigger: GCCAGCGCTGAGGGGCTTCCAGCGGACAGGGACCCC...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTGGGGTCCCTGTCCGCTaGAAGCCCCTCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSGVPVR*KPLSAG
Trigger: GCCAGCGCTGAGGGGCTTCCAGCGGACAGGGACCCC...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp ACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACACTCGCCGGTGGACACTaGGGTTCGTTCTCACCGGGA +
Preference number: 4 (lower is better)
Translates to: TGKILKTVAMSSQAEELTLAGGH*GSFSPG
Trigger: TCCCGGTGAGAACGAACCGCAGTGTCCACCGGCGAG...TGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000531571.5
CDS-3UTR GCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCCTCGCCGGTGGACACTaGGGTTCGTTCTCACCGGGA +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSLAGGH*GSFSPG
Trigger: TCCCGGTGAGAACGAACCGCAGTGTCCACCGGCGAG...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp GCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGTCTTCCGCTACTGCTaGTGCCACCCCAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: APGTGKILKTVAMSSQAEVFRYC*CHPRGF
Trigger: AAATCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGAC...TTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAATCCGTCTTCCGCTACTaGTGCTGCCACCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQSVFRY*CCHPRG
Trigger: TCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGACGGA...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CCA 90 bp ACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTAGCACTGGCTCCTCGCCGGTaGACACTGCGGTTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: TENSGHVLPSRRANIDLALAPRR*TLRFVL
Trigger: GAGAACGAACCGCAGTGTCCACCGGCGAGGAGCCAG...TGCTAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CCA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGAAGCCCCTCAGCGCTaGCACCCAGTTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQEAPQR*HPVPRD
Trigger: GTCTCTGGGAACTGGGTGCCAGCGCTGAGGGGCTTC...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CCA 90 bp ACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTAGCAGAAGCCCCTCAGCGCTaGCACCCAGTTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TENSGHVLPSRRANIDLAEAPQR*HPVPRD
Trigger: GTCTCTGGGAACTGGGTGCCAGCGCTGAGGGGCTTC...TGCTAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000531571.5
CDS-3UTR GCA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCGTCTTCCGCTACTaGTGCTGCCACCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSSVFRY*CCHPRG
Trigger: TCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGACGGA...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp AGGGGGTTGGGATCTGCAATAGATATGCATCTGTTCCCCACCCTGCAGGGCACGAAGCCAGGCACTTCTTaGTTGAAAAATGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RGLGSAIDMHLFPTLQGTKPGTS*LKNVPL
Trigger: GAGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTT...CGTGCCCTGCAGGGTGGGGAACAGATGCATATCTATTGCAGATCCCAACCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000531571.5
CDS-3UTR GCA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTACAGGGGGTTGGGATCTaGAATAGCTGTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GTGKILKTVAMSSQAEELQGVGI*NSCLQP
Trigger: GGGCTGGAGACAGCTATTGCAGATCCCAACCCCCTG...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000529294.5
CDS-3UTR GCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTCTCGCCGGTGGACACTaGGGTTCGTTCTCACCGGGA +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSLAGGH*GSFSPG
Trigger: TCCCGGTGAGAACGAACCGCAGTGTCCACCGGCGAG...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp AATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTACTCGCCGGTGGACACTaGGGTTCGTTCTCACCGGGA +
Preference number: 4 (lower is better)
Translates to: NTENSGHVLPSRRANIDLLAGGH*GSFSPG
Trigger: TCCCGGTGAGAACGAACCGCAGTGTCCACCGGCGAG...TAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000531571.5
CDS-3UTR GCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCACTCGCCGGTGGACACTaGGGTTCGTTCTCACCGGGA +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFALAGGH*GSFSPG
Trigger: TCCCGGTGAGAACGAACCGCAGTGTCCACCGGCGAG...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp ACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACAGTCTTCCGCTACTGCTaGTGCCACCCCAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: TGKILKTVAMSSQAEELTVFRYC*CHPRGF
Trigger: AAATCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGAC...TGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGTCTTCCGCTACTGCTaGTGCCACCCCAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQVFRYC*CHPRGF
Trigger: AAATCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGAC...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATCCGTCTTCCGCTACTaGTGCTGCCACCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFASVFRY*CCHPRG
Trigger: TCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGACGGA...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp AGTCTCTCCATAAACGCCAGCGTGCACACACTCGAACACGAGGTCGGGTCGGGCTTTGTAACTTTTCTGTaGAGTCACACTGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: SLSINASVHTLEHEVGSGFVTFL*SHTVMK
Trigger: CTTCATTACAGTGTGACTGCACAGAAAAGTTACAAA...GCCCGACCCGACCTCGTGTTCGAGTGTGTGCACGCTGGCGTTTATGGAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531571.5
CDS-3UTR GCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCCTGAGACCGCACCACTaGACTCCATCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSLRPHH*TPSWVT
Trigger: TGTCACCCAGGATGGAGTGCAGTGGTGCGGTCTCAG...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTCTGGCTCCTCGCCGGTaGACACTGCGGTTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFLAPRR*TLRFVL
Trigger: GAGAACGAACCGCAGTGTCCACCGGCGAGGAGCCAG...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAACTGGCTCCTCGCCGGTaGACACTGCGGTTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKLAPRR*TLRFVL
Trigger: GAGAACGAACCGCAGTGTCCACCGGCGAGGAGCCAG...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAGAAGCCCCTCAGCGCTaGCACCCAGTTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKEAPQR*HPVPRD
Trigger: GTCTCTGGGAACTGGGTGCCAGCGCTGAGGGGCTTC...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCAGAAGCCCCTCAGCGCTaGCACCCAGTTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFAEAPQR*HPVPRD
Trigger: GTCTCTGGGAACTGGGTGCCAGCGCTGAGGGGCTTC...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTGGGAGTCTGAGGTaGGTGGGATCACTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSFGSLR*VGSLEG
Trigger: GCCCTCAAGTGATCCCACCCACCTCAGACTCCCAAA...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCGGGAAGCTTGAAGGGTaGGGGGAGATGGTACCTGGA +
Preference number: 4 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSGKLEG*GEMVPG
Trigger: TCCAGGTACCATCTCCCCCCACCCTTCAAGCTTCCC...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCAGGTCGAGGCTGCAGTaGGCTGAGACCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLRSRLQ*AETAPL
Trigger: CAGTGGTGCGGTCTCAGCTCACTGCAGCCTCGACCT...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCAGTCTTCCGCTACTGCTaGTGCCACCCCAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFAVFRYC*CHPRGF
Trigger: AAATCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGAC...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp AATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTAGTCTTCCGCTACTGCTaGTGCCACCCCAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: NTENSGHVLPSRRANIDLVFRYC*CHPRGF
Trigger: AAATCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGAC...TAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTGTCTTCCGCTACTGCTaGTGCCACCCCAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSVFRYC*CHPRGF
Trigger: AAATCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGAC...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCTCCGTCTTCCGCTACTaGTGCTGCCACCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLSVFRY*CCHPRG
Trigger: TCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGACGGA...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGCTGGCTCCTCGCCGGTaGACACTGCGGTTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: LTGFNIHICGGRPSISNLLAPRR*TLRFVL
Trigger: GAGAACGAACCGCAGTGTCCACCGGCGAGGAGCCAG...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp AATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTAGGGAAGCTTGAAGGGTaGGGGGAGATGGTACCTGGA +
Preference number: 4 (lower is better)
Translates to: NTENSGHVLPSRRANIDLGKLEG*GEMVPG
Trigger: TCCAGGTACCATCTCCCCCCACCCTTCAAGCTTCCC...TAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCCACCCCGACCCCGAGTaGTGGCATTCAATATTAAGA +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSHPDPE*WHSILR
Trigger: TCTTAATATTGAATGCCATCACTCGGGGTCGGGGTG...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAGGCAGATGCAGGAGGTaGCATTCCAGTGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKGRCRR*HSSGSI
Trigger: AATGGAGCCACTGGAATGTCACCTCCTGCATCTGCC...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCTCCGTCTTCCGCTACTaGTGCTGCCACCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHISVFRY*CCHPRG
Trigger: TCCCCTGGGGTGGCAGCAGCAGTAGCGGAAGACGGA...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp CTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATCAAGAAGAACAGGGGGTTGGGATCTaGAATAGCTGTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LAMMSDGLFATQQIHQEEQGVGI*NSCLQP
Trigger: GGGCTGGAGACAGCTATTGCAGATCCCAACCCCCTG...TTCTTCTTGATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000529294.5
CDS-3UTR CCA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCCTGGCTCCTCGCCGGTaGACACTGCGGTTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHILAPRR*TLRFVL
Trigger: GAGAACGAACCGCAGTGTCCACCGGCGAGGAGCCAG...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCGTAATCCCAGCTACTTaGGAGGTTGACGCACGAGAA +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSVIPAT*EVDARE
Trigger: TTCTCGTGCGTCAACCTCCCAAGTAGCTGGGATTAC...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTACAGGCACTTCTTGCTTaGAAAATGTTCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GTGKILKTVAMSSQAEELQALLA*KMFLST
Trigger: AGTGGAGAGGAACATTTTTCAAGCAAGAAGTGCCTG...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTATCTTGCTATGATGTCTaGCGGACTTTTTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: GTGKILKTVAMSSQAEELSCYDV*RTFCHS
Trigger: TGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGA...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGCGCACGAGAATCTCTTaGACCCAGGAGGTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LTGFNIHICGGRPSISNLRTRIS*TQEVEA
Trigger: AGCCTCGACCTCCTGGGTTCAAGAGATTCTCGTGCG...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGGTGGGTGGGATCACTTaGGGGCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSVGGIT*GQEFET
Trigger: GGTCTCAAACTCCTGCCCTCAAGTGATCCCACCCAC...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAACTGTGCCCGGTTATGTaGGACTGCTCCAGTACTACT +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKLCPVM*DCSSTT
Trigger: AGTAGTACTGGAGCAGTCTCACATAACCGGGCACAG...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACAGTGGTTTGCTTCTTCTaGCAAGGCAGCAACCTTAGA +
Preference number: 4 (lower is better)
Translates to: WDTGWFEKECTNRPAASTVVCFF*QGSNLR
Trigger: TCTAAGGTTGCTGCCTTGTCAGAAGAAGCAAACCAC...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCTCCTCACACACTCTCTaGGCCCCTTCCTCAACTTAC +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGSSHTL*APSSTY
Trigger: GTAAGTTGAGGAAGGGGCCCAGAGAGTGTGTGAGGA...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCACCTCCCACTCTCTATaGCTGCCAATAACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSTSHSL*LPITAL
Trigger: AAGAGCAGTTATTGGCAGCCATAGAGAGTGGGAGGT...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp ACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACAAGATTTTACACTTTTTaGGGCCTCCGTCTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: TGKILKTVAMSSQAEELTRFYTF*GLRLPL
Trigger: TAGCGGAAGACGGAGGCCTCAAAAAGTGTAAAATCT...TGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTCTTGCTATGATGTCTaGCGGACTTTTTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSSCYDV*RTFCHS
Trigger: TGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGA...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAATACACGGGGAGGGCTaGCTTTTTATACAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKIHGEG*LFIQAG
Trigger: ACCTGCCTGTATAAAAAGTCAGCCCTCCCCGTGTAT...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCTTGAGGGCAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLLRAGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGCCCTCAA...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGAGCACTTTGGGAGTCTaGGGTGGGTGGGATCACTTG +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSSTLGV*GGWDHL
Trigger: CAAGTGATCCCACCCACCTCAGACTCCCAAAGTGCT...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTAAGCCTGCTCCTCTaGGTCTTCGCCATCTTATTA +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSLSLLL*VFAILL
Trigger: TAATAAGATGGCGAAGACTCAGAGGAGCAGGCTTAA...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAAAGCCAGGCACTTCTTaGTTGAAAAATGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GTGKILKTVAMSSQAEELKPGTS*LKNVPL
Trigger: GAGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTT...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAAGAGGTGTGGCTCAATaGCCATCACATGTAACAAGA +
Preference number: 4 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQRGVAQ*PSHVTR
Trigger: TCTTGTTACATGTGATGGGCATTGAGCCACACCTCT...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
CDS-3UTR GCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTTCCTTCTGCCTGGAATaGTCTCCTCCCAGATATCCA +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSSFCLE*SPPRYP
Trigger: TGGATATCTGGGAGGAGAGCATTCCAGGCAGAAGGA...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp TTTCTTCACATAGTTCTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATCTGTTCCCCACCCTaGAGGGCACGTAGACTCTTA +
Preference number: 4 (lower is better)
Translates to: FLHIVLAMMSDGLFATQQICSPP*RARRLL
Trigger: TAAGAGTCTACGTGCCCTGCAGGGTGGGGAACAGAT...TTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGAACTATGTGAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531571.5
CDS-3UTR CCA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTATTTTTCCATTCCTTCTaGCCCTACAACTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: GTGKILKTVAMSSQAEELFFHSF*PYNFIR
Trigger: CCTGATGAAGTTGTAGGGCCAGAAGGAATGGAAAAA...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCCAAGCGTGGCCTCAGTaGTACTGGACTCCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGQAWPQ*YWTPKY
Trigger: ATACTTTGGAGTCCAGTACCACTGAGGCCACGCTTG...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTAGAGTAAAGCAAGCGTaGCCTCAGTGGTACTGGACT +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFRVKQA*PQWYWT
Trigger: AGTCCAGTACCACTGAGGCCACGCTTGCTTTACTCT...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CAA 72 bp TCTTGGGAACAGAGTAAACTGTTGTACACCTGCATTTaGACTGTGACCCATCATATGAGGTCAGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SWEQSKLLYTCI*TVTHHMRSGVE
Trigger: TTCCACACCTGACCTCATATGATGGGTCACAGTCAAAATGCAGGTGTACAACAGTTTACTCTGTTCCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCAGATTTTACACTTTTTaGGGCCTCCGTCTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSRFYTF*GLRLPL
Trigger: TAGCGGAAGACGGAGGCCTCAAAAAGTGTAAAATCT...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTACATGGACTGTTCTGCTaGATTCTAATACATTGTACC +
Preference number: 4 (lower is better)
Translates to: GTGKILKTVAMSSQAEELHGLFC*ILIHCT
Trigger: GGTACAATGTATTAGAATTCAGCAGAACAGTCCATG...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAGAGAAGTCTTTCATATaGATGAAAATGCACCCGTTG +
Preference number: 4 (lower is better)
Translates to: GTGKILKTVAMSSQAEELEKSFI*MKMHPL
Trigger: CAACGGGTGCATTTTCATTCATATGAAAGACTTCTC...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
CDS-3UTR TCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGCACCATGCTGAGAGCTaGAGACATGGTTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LTGFNIHICGGRPSISNLHHAES*RHGFCP
Trigger: AGGGCAGAAACCATGTCTTCAGCTCTCAGCATGGTG...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGTTTGACAACCTACCATaGGTCAGGCACCATGCTGAG +
Preference number: 4 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPFDNLP*VRHHAE
Trigger: CTCAGCATGGTGCCTGACTCATGGTAGGTTGTCAAA...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp AATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTACAGGGGGTTGGGATCTaGAATAGCTGGAGATTTTAC +
Preference number: 4 (lower is better)
Translates to: NTENSGHVLPSRRANIDLQGVGI*NSWRFY
Trigger: GTAAAATCTCCAGCTATTGCAGATCCCAACCCCCTG...TAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527779.1
CDS-3UTR GCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCAAGCCAGGCACTTCTTaGTTGAAAAATGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSKPGTS*LKNVPL
Trigger: GAGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTT...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531571.5
CDS-3UTR GCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAAAAACACACAGTCCCTaGTCTCAAGGAGCTCACAGT +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKKTHSP*SQGAHS
Trigger: ACTGTGAGCTCCTTGAGAGCAGGGACTGTGTGTTTT...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp ACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTAGCATTTTTCCATTCCTTCTaGCCCTACAACTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: TENSGHVLPSRRANIDLAFFHSF*PYNFIR
Trigger: CCTGATGAAGTTGTAGGGCCAGAAGGAATGGAAAAA...TGCTAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCCAGGCACTTCTTGCTTaGAAAATGTTCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGQALLA*KMFLST
Trigger: AGTGGAGAGGAACATTTTTCAAGCAAGAAGTGCCTG...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAACAGGCACTTCTTGCTTaGAAAATGTTCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKQALLA*KMFLST
Trigger: AGTGGAGAGGAACATTTTTCAAGCAAGAAGTGCCTG...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531571.5
CDS-3UTR TCA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAACATGGACTGTTCTGCTaGATTCTAATACATTGTACC +
Preference number: 4 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQHGLFC*ILIHCT
Trigger: GGTACAATGTATTAGAATTCAGCAGAACAGTCCATG...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTTGCTATGATGTCTaGCGGACTTTTTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFSCYDV*RTFCHS
Trigger: TGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGA...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp AATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTATCTTGCTATGATGTCTaGCGGACTTTTTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: NTENSGHVLPSRRANIDLSCYDV*RTFCHS
Trigger: TGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGA...TAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTTCTTGCTATGATGTCTaGCGGACTTTTTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSSCYDV*RTFCHS
Trigger: TGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGA...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCGAGAAGTCTTTCATATaGATGAAAATGCACCCGTTG +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSEKSFI*MKMHPL
Trigger: CAACGGGTGCATTTTCATTCATATGAAAGACTTCTC...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCGGGTTAAAGTCTGCTTaGAGAAGTAGTGGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGGLKSA*RSSGSK
Trigger: TTTGCTCCCACTACTTCTTCAAGCAGACTTTAACCC...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTCTGAACACAGATCTCTaGACTCCAAACCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVLNTDL*TPNPGL
Trigger: GAGCCCTGGGTTTGGAGTTCAGAGATCTGTGTTCAG...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAGACAAGCAGAACAAATaGACCATCCATCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKDKQNK*TIHPSG
Trigger: TCCTGAAGGATGGATGGTTCATTTGTTCTGCTTGTC...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTAGAGGTGTGGCTCAATaGCCATCACATGTAACAAGA +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSRGVAQ*PSHVTR
Trigger: TCTTGTTACATGTGATGGGCATTGAGCCACACCTCT...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAAGAGGTGTGGCTCAATaGCCATCACATGTAACAAGA +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKRGVAQ*PSHVTR
Trigger: TCTTGTTACATGTGATGGGCATTGAGCCACACCTCT...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCAAGAGGTGTGGCTCAATaGCCATCACATGTAACAAGA +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFARGVAQ*PSHVTR
Trigger: TCTTGTTACATGTGATGGGCATTGAGCCACACCTCT...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CCA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTTTTTCCATTCCTTCTaGCCCTACAACTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSFFHSF*PYNFIR
Trigger: CCTGATGAAGTTGTAGGGCCAGAAGGAATGGAAAAA...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CCA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTATTACTAAGATCAGCATaGACTGTTCTGCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: GTGKILKTVAMSSQAEELLLRSA*TVLLNS
Trigger: AGAATTCAGCAGAACAGTCCATGCTGATCTTAGTAA...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CCA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGCAGCTCACAGAGTTTTaGGGAAATCTGGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPQLTEF*GNLALS
Trigger: AGAGAGAGCCAGATTTCCCCAAAACTCTGTGAGCTG...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp CTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATCAAGAAGAAAGATTTTACACTTTTTaGGGCCTCCGTCTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: LAMMSDGLFATQQIHQEERFYTF*GLRLPL
Trigger: TAGCGGAAGACGGAGGCCTCAAAAAGTGTAAAATCT...TTCTTCTTGATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCATATCAAGGCTTCTCTaGTCTTTATCCCTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSISRLL*SLSLAK
Trigger: TTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATAT...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTATACACGTGGGAATTaGAAGGTTTGCATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSYTRGN*KVCIFF
Trigger: GAAGAAAATGCAAACCTTTCAATTCCCACGTGTATA...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAATATACACGTGGGAATTaGAAGGTTTGCATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQYTRGN*KVCIFF
Trigger: GAAGAAAATGCAAACCTTTCAATTCCCACGTGTATA...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
CDS-3UTR TCA 90 bp ACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTAGCATATACACGTGGGAATTaGAAGGTTTGCATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TENSGHVLPSRRANIDLAYTRGN*KVCIFF
Trigger: GAAGAAAATGCAAACCTTTCAATTCCCACGTGTATA...TGCTAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
CDS-3UTR TCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCAGTCTTTCATATGAATaGAAATGCACCCGTTGGATT +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSSLSYE*KCTRWI
Trigger: AATCCAACGGGTGCATTTTCATTCATATGAAAGACT...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCGACACAGCAAATGTATaGTCGATCAGTTTTAAGACT +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSDTANV*SISFKT
Trigger: AGTCTTAAAACTGATCGATCATACATTTGCTGTGTC...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACACACAAAAGTTGGCCTTaGATTTCATCGATCATATGT +
Preference number: 4 (lower is better)
Translates to: WDTGWFEKECTNRPAASTHKSWP*ISSIIC
Trigger: ACATATGATCGATGAAATTCAAGGCCAACTTTTGTG...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCTTCTGCAAATGCTTTTaGCAACCTACCATGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGFCKCF*QPTMSQ
Trigger: CTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAA...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTAAGCCAGGCACTTCTTaGTTGAAAAATGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFKPGTS*LKNVPL
Trigger: GAGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTT...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531571.5
CDS-3UTR GCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCAACTTCATCAGGACCTaGATATTCATAAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSNFIRT*IFIKPS
Trigger: GCTTGGTTTTATGAATATGCAGGTCCTGATGAAGTT...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531571.5
CDS-3UTR GCA 90 bp ACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACAAACTTCATCAGGACCTaGATATTCATAAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: TGKILKTVAMSSQAEELTNFIRT*IFIKPS
Trigger: GCTTGGTTTTATGAATATGCAGGTCCTGATGAAGTT...TGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTACTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT +
Preference number: 4 (lower is better)
Translates to: GTGKILKTVAMSSQAEELLIFIP*KIKGIS
Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAATTTTTCCATTCCTTCTaGCCCTACAACTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKFFHSF*PYNFIR
Trigger: CCTGATGAAGTTGTAGGGCCAGAAGGAATGGAAAAA...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531571.5
CDS-3UTR CCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTTTTTTCCATTCCTTCTaGCCCTACAACTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSFFHSF*PYNFIR
Trigger: CCTGATGAAGTTGTAGGGCCAGAAGGAATGGAAAAA...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCAAGTATGCACAGATTTaGGTATACACAAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGKYAQI*VYTRVL
Trigger: CAGGACCCTTGTGTATACCCAAATCTGTGCATACTT...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTTGTCCAATCAACATCTaGCTCTACTTTCTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSCPINI*LYFLPV
Trigger: TACTGGGAGAAAGTAGAGCCAGATGTTGATTGGACA...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGAAACTTAGCTGGGCATaGTGGCAGGCATCTGTAATC +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSKLSWA*WQASVI
Trigger: GATTACAGATGCCTGCCACCATGCCCAGCTAAGTTT...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCACAAGAGGACCATGTATaGGAAAACTTTCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFAQEDHV*ENFPGE
Trigger: TTCACCTGGAAAGTTTTCCCATACATGGTCCTCTTG...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCCGTAGACTCTTAACGTaGGCGGCTCTTCTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHIRRLLT*AALLVS
Trigger: AGAGACTAGAAGAGCCGCCCACGTTAAGAGTCTACG...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531571.5
CDS-3UTR TCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGAGATTTTACACTTTTTaGGGCCTCCGTCTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: LTGFNIHICGGRPSISNLRFYTF*GLRLPL
Trigger: TAGCGGAAGACGGAGGCCTCAAAAAGTGTAAAATCT...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCATATCAAGGCTTCTCTaGTCTTTATCCCTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSISRLL*SLSLAK
Trigger: TTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATAT...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCACATGGACTGTTCTGCTaGATTCTAATACATTGTACC +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFAHGLFC*ILIHCT
Trigger: GGTACAATGTATTAGAATTCAGCAGAACAGTCCATG...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAGAGAAGTCTTTCATATaGATGAAAATGCACCCGTTG +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKEKSFI*MKMHPL
Trigger: CAACGGGTGCATTTTCATTCATATGAAAGACTTCTC...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTGAGAAGTCTTTCATATaGATGAAAATGCACCCGTTG +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFEKSFI*MKMHPL
Trigger: CAACGGGTGCATTTTCATTCATATGAAAGACTTCTC...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCCCCAGAGTTCTCTCATaGTTCCTTATTCTATTGTCT +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGPRVLS*FLILLS
Trigger: AGACAATAGAATAAGGAATCATGAGAGAACTCTGGG...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTCCTCAAGACACTTaGTTACCAACAGGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFAFPQDT*LPTGRK
Trigger: TTTTCTGCCTGTTGGTAATCAAGTGTCTTGAGGAAA...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCAAAAGTGCCTTTTACATaGATTAGGAAAGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFAKVPFT*IRKAFP
Trigger: AGGGAAGGCTTTCCTAATTCATGTAAAAGGCACTTT...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTTCACACACTGTCACCTaGATCCCTGGCAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVSHTVT*IPGNFL
Trigger: TAGGAAATTGCCAGGGATTCAGGTGACAGTGTGTGA...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTAGAGGTTCTAATACATaGCACAGCATACACAGCAAA +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFRGSNT*HSIHSK
Trigger: TTTGCTGTGTATGCTGTGTCATGTATTAGAACCTCT...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGGCCTGGCCAACATGGTaGAATCCCATCTTTACTAAA +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSAWPTW*NPIFTK
Trigger: TTTAGTAAAGATGGGATTTCACCATGTTGGCCAGGC...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGGCCAATAACTGCTCTTaGGGAATGGGGTTAAAGTCT +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSANNCS*GMGLKS
Trigger: AGACTTTAACCCCATTCCTCAAGAGCAGTTATTGGC...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGGAACTCACTCTCCTCTaGACTCCTATAGCTTATTGT +
Preference number: 4 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPELTLL*TPIAYC
Trigger: ACAATAAGCTATAGGAGTTCAGAGGAGAGTGAGTTC...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTCAGGGGGTTGGGATCTaGAATAGCTGGAGATTTTAC +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVQGVGI*NSWRFY
Trigger: GTAAAATCTCCAGCTATTGCAGATCCCAACCCCCTG...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTGTAACTTTTCTGTaGAGTCACACTGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSFVTFL*SHTVMK
Trigger: CTTCATTACAGTGTGACTGCACAGAAAAGTTACAAA...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531571.5
CDS-3UTR GCA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAATTTGTAACTTTTCTGTaGAGTCACACTGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQFVTFL*SHTVMK
Trigger: CTTCATTACAGTGTGACTGCACAGAAAAGTTACAAA...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
CDS-3UTR GCA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCCTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT +
Preference number: 4 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSLIFIP*KIKGIS
Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAACTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT +
Preference number: 4 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQLIFIP*KIKGIS
Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp ACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTAGCACTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT +
Preference number: 4 (lower is better)
Translates to: TENSGHVLPSRRANIDLALIFIP*KIKGIS
Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...TGCTAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACACTGCTAGTACAAAAGTaGCTTTTACATGAATTAGGA +
Preference number: 4 (lower is better)
Translates to: WDTGWFEKECTNRPAASTLLVQK*LLHELG
Trigger: TCCTAATTCATGTAAAAGGCACTTTTGTACTAGCAG...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACAGAGATTGAATGTAGGTaGAGGTTGAATATCTCTTAT +
Preference number: 4 (lower is better)
Translates to: WDTGWFEKECTNRPAASTEIECR*RLNISY
Trigger: ATAAGAGATATTCAACCTGCACCTACATTCAATCTC...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTGTGGTTTTTAAAACCTaGTATTCAGAGAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSVVFKT*YSESKE
Trigger: CTCCTTGCTCTCTGAATAGCAGGTTTTAAAAACCAC...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCTGTTTGATGTCAAGGTaGAAATGTGCAAGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGCLMSR*KCASSG
Trigger: ACCACTACTTGCACATTTGCACCTTGACATCAAACA...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGTCCATGTCTACAGGATaGAGTAGAGATCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSSMSTG*SRDLGH
Trigger: ATGCCCAAGATCTCTACTGCATCCTGTAGACATGGA...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCACTTATCCAAAATGCTTaGGACCGGAAGTGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFALIQNA*DRKCFR
Trigger: TCTAAAACACTTCCGGTCCCAAGCATTTTGGATAAG...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CAA 72 bp GAACAAAGTTTTCATATCACTGGGATACTGGATGGTTaGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTA +
Preference number: 4 (lower is better)
Translates to: EQSFHITGILDG*KRNVQTGLLLV
Trigger: TACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCAGTGATATGAAAACTTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CAA 72 bp CTTAAACGTAAGTTTTATTCAGTTCTGCAAATGCTTTaGACAACCTACCATGAGTCAGGCACCATGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LKRKFYSVLQML*TTYHESGTMLR
Trigger: TCTCAGCATGGTGCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCAGATTTTACACTTTTTaGGGCCTCCGTCTTCCGCTA +
Preference number: 4 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHIRFYTF*GLRLPL
Trigger: TAGCGGAAGACGGAGGCCTCAAAAAGTGTAAAATCT...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCCAGGCACTTCTTGCTTaGAAAATGTTCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHIQALLA*KMFLST
Trigger: AGTGGAGAGGAACATTTTTCAAGCAAGAAGTGCCTG...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTATATCAAGGCTTCTCTaGTCTTTATCCCTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFISRLL*SLSLAK
Trigger: TTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATAT...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp CACATAGTTCTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATCATGGACTGTTCTGCTaGATTCTAATACATTGTACC +
Preference number: 4 (lower is better)
Translates to: HIVLAMMSDGLFATQQIHHGLFC*ILIHCT
Trigger: GGTACAATGTATTAGAATTCAGCAGAACAGTCCATG...ATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGAACTATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTATACACGTGGGAATTaGAAGGTTTGCATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFYTRGN*KVCIFF
Trigger: GAAGAAAATGCAAACCTTTCAATTCCCACGTGTATA...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTAGTCTTTCATATGAATaGAAATGCACCCGTTGGATT +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFSLSYE*KCTRWI
Trigger: AATCCAACGGGTGCATTTTCATTCATATGAAAGACT...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR TCA 90 bp CTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATCAAGAAGAAGAGAAGTCTTTCATATaGATGAAAATGCACCCGTTG +
Preference number: 4 (lower is better)
Translates to: LAMMSDGLFATQQIHQEEEKSFI*MKMHPL
Trigger: CAACGGGTGCATTTTCATTCATATGAAAGACTTCTC...TTCTTCTTGATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
CDS-3UTR TCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCAATGTTTCTGAAGTTGTaGCTGGGCTATGAATATGAA +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFAMFLKL*LGYEYE
Trigger: TTCATATTCATAGCCCAGTCACAACTTCAGAAACAT...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCAGACCTTCAAAATATGTaGGGAGCTTTTATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFADLQNM*GAFICD
Trigger: ATCACAGATAAAAGCTCCTCACATATTTTGAAGGTC...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCACTACAGTCACACTaGTCTCTTTACTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFSLQSH*SLYCFF
Trigger: AAAGAAACAGTAAAGAGATCAGTGTGACTGTAGTGA...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGTCAAACTTCTCAAACTaGCGTAAGCCAGATAGAGAG +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSSNFSN*RKPDRE
Trigger: CTCTCTATCTGGCTTACGTCAGTTTGAGAAGTTTGA...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGATAGAGTCCTTCCTATaGAGTCAAACCAATCCACTT +
Preference number: 4 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPIESFL*SQTNPL
Trigger: AAGTGGATTGGTTTGACTTCATAGGAAGGACTCTAT...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGAGTGAGGAACACCTATaGATAACATGGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LTGFNIHICGGRPSISNLSEEHL*ITWSLF
Trigger: GAACAGAGACCATGTTATTCATAGGTGTTCCTCACT...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCTCTGAAAATCCACTTTaGCTATTTCAGTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGSENPL*LFQSTE
Trigger: TTCTGTGGACTGAAATAGTCAAAGTGGATTTTCAGA...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTAGAAGCAAAGGACTCTaGACACAGATCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVRSKGL*TQISEL
Trigger: GAGTTCAGAGATCTGTGTTCAGAGTCCTTTGCTTCT...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCCTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT +
Preference number: 4 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSLIFIP*KIKGIS
Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTCAGTCTTCCAAATTGTaGAGAGATGACTATAATGAG +
Preference number: 4 (lower is better)
Translates to: FPLITLACIHVGIERFAFQSSKL*RDDYNE
Trigger: CTCATTATAGTCATCTCTGCACAATTTGGAAGACTG...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCGGCTCTATTGAGTTGTaGACAATTAATTATACCCAG +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGGSIEL*TINYTQ
Trigger: CTGGGTATAATTAATTGTGCACAACTCAATAGAGCC...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCCTAACACCACTGGTATaGTCAGTTCATAACTCAGTG +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLLTPLV*SVHNSV
Trigger: CACTGAGTTATGAACTGAGCATACCAGTGGTGTTAG...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATCTTCAGTTCAGATGTaGCTTGAAGAGTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFASSVQM*LEESTK
Trigger: TTTAGTTGACTCTTCAAGGCACATCTGAACTGAAGA...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCCTTCCTACTACTACCTaGTTCCATCCTTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLLPTTT*FHPCFD
Trigger: ATCAAAGCAAGGATGGAAGCAGGTAGTAGTAGGAAG...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAGTTCAAATATCCAACTaGCCACTCTACATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKVQISN*PLYIFL
Trigger: AAGGAAAATGTAGAGTGGGCAGTTGGATATTTGAAC...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTTTACTAAGATCAGCATaGACTGTTCTGCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSLLRSA*TVLLNS
Trigger: AGAATTCAGCAGAACAGTCCATGCTGATCTTAGTAA...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CCA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAATGTCTCCCACTATTATaGGTGTTTCAGAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKCLPLL*VFQKTV
Trigger: TACAGTTTTCTGAAACACCCATAATAGTGGGAGACA...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGCTCTACATTTTCCTTTaGACGTCTGACAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: LTGFNIHICGGRPSISNLLYIFL*TSDRQV
Trigger: GACTTGTCTGTCAGACGTCCAAAGGAAAATGTAGAG...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCCACTTACTCTCTAAGTaGTTTCATCCATGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLHLLSK*FHPCPD
Trigger: GTCAGGACATGGATGAAACCACTTAGAGAGTAAGTG...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTGGGCATAGCAAAGCCTaGGCCTATGGATATTTATTG +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVGHSKA*AYGYLL
Trigger: CAATAAATATCCATAGGCCCAGGCTTTGCTATGCCC...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTGATCATGAGATTTGGTaGCTTCACATATTTACTTCC +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSDHEIW*LHIFTS
Trigger: GGAAGTAAATATGTGAAGCCACCAAATCTCATGATC...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CAA 72 bp CATGAATTAGGAAAGCCTTCCCTTTCCTCAAGACACTaGATTACCAACAGGCAGAAAATTGTGATAATTAGC +
Preference number: 4 (lower is better)
Translates to: HELGKPSLSSRH*ITNRQKIVIIS
Trigger: GCTAATTATCACAATTTTCTGCCTGTTGGTAATCAAGTGTCTTGAGGAAAGGGAAGGCTTTCCTAATTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CAA 72 bp CTGCATTCATTAATTGAGATTGAATGTAGGTGCAGGTaGAATATCTCTTATCCAAAATGCTTGGGACCGGAA +
Preference number: 4 (lower is better)
Translates to: LHSLIEIECRCR*NISYPKCLGPE
Trigger: TTCCGGTCCCAAGCATTTTGGATAAGAGATATTCAACCTGCACCTACATTCAATCTCAATTAATGAATGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCCATGGACTGTTCTGCTaGATTCTAATACATTGTACC +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLHGLFC*ILIHCT
Trigger: GGTACAATGTATTAGAATTCAGCAGAACAGTCCATG...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp CACATAGTTCTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAAATTCATAGTCTTTCATATGAATaGAAATGCACCCGTTGGATT +
Preference number: 4 (lower is better)
Translates to: HIVLAMMSDGLFATQQIHSLSYE*KCTRWI
Trigger: AATCCAACGGGTGCATTTTCATTCATATGAAAGACT...ATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGAACTATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
CDS-3UTR TCA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGTCTGTAAATTCACGGTaGATTGGAACCTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPSVNSR*IGTSKI
Trigger: GATTTTTGAGGTTCCAATTCACCGTGAATTTACAGA...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCGGATACTGGATGGTTTaGAAAGGAATGTACAAACAG +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLGYWMV*KGMYKQ
Trigger: CTGTTTGTACATTCCTTTTCAAACCATCCAGTATCC...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGAAACCAAACATGGATTaGAAATACAGTATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSKPNMD*KYSIPG
Trigger: CCCGGGAATACTGTATTTTCAATCCATGTTTGGTTT...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGATACCTTGTATGCCTTaGAAACTCTGGAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: LTGFNIHICGGRPSISNLIPCMP*KLWSYL
Trigger: GAGATAACTCCAGAGTTTTCAAGGCATACAAGGTAT...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGATTCCAAGAATAAAGTaGCACTCCCTCCTCAATTTA +
Preference number: 4 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPIPRIK*HSLLNL
Trigger: TAAATTGAGGAGGGAGTGTCACTTTATTCTTGGAAT...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGCACAAGTCCATCCTATaGGGTTCAATTGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPHKSIL*GSIDVF
Trigger: AAAAACATCAATTGAACCTCATAGGATGGACTTGTG...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTCTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSLIFIP*KIKGIS
Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR GCA 90 bp AATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTACTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT +
Preference number: 4 (lower is better)
Translates to: NTENSGHVLPSRRANIDLLIFIP*KIKGIS
Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...TAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR GCA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCTACCAAGGATGCCTGTaGTTTCATAAATATACCTTT +
Preference number: 4 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGYQGCL*FHKYTF
Trigger: AAAGGTATATTTATGAAAGCACAGGCATCCTTGGTA...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCAGCACAAGATATTAAGTaGTGTAAGATGCTACAACAA +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFAAQDIK*CKMLQQ
Trigger: TTGTTGTAGCATCTTACAGCACTTAATATCTTGTGC...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp TCTGTGCAGTCACACAAAATGGCTAGTCTAGGCCAGTTATATCCAGTTCATATATTTGTAACTTTTCTGTaGAGTCACACAAAATGGCTA +
Preference number: 4 (lower is better)
Translates to: SVQSHKMASLGQLYPVHIFVTFL*SHTKWL
Trigger: TAGCCATTTTGTGTGACTGCACAGAAAAGTTACAAA...TATATGAACTGGATATAACTGGCCTAGACTAGCCATTTTGTGTGACTGCACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583974.1
CDS-3UTR CCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTTTTTTCCATTCCTTCTaGCCCTACAACTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVFFHSF*PYNFIR
Trigger: CCTGATGAAGTTGTAGGGCCAGAAGGAATGGAAAAA...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCTTTTTCCATTCCTTCTaGCCCTACAACTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHIFFHSF*PYNFIR
Trigger: CCTGATGAAGTTGTAGGGCCAGAAGGAATGGAAAAA...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGCACTGGGATACTGGATaGTTTGAAAAGGAATGTACA +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSHWDTG*FEKECT
Trigger: TGTACATTCCTTTTCAAACCATCCAGTATCCCAGTG...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTCACACCAATAACAACTaGTCAGGAAAAGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVHTNNN*SGKGAK
Trigger: CTTTGCTCCTTTTCCTGACCAGTTGTTATTGGTGTG...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCAGTACCATTTGTCACCTaGATTTACCATATTATCTTC +
Preference number: 4 (lower is better)
Translates to: FFPLITLACIHVGIERFAVPFVT*IYHIIF
Trigger: GAAGATAATATGGTAAATCCAGGTGACAAATGGTAC...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTCACCAATTCATACATTaGAAGTTCAAGAACCAGATT +
Preference number: 4 (lower is better)
Translates to: PLITLACIHVGIERFAFSHQFIH*KFKNQI
Trigger: AATCTGGTTCTTGAACTTCCAATGTATGAATTGGTG...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CAA 72 bp AATATTCTACACAAAACACACACAGCTCACAGAGTTTaGGGGAAATCTGGCTCTCTCTATATATTCACTTCA +
Preference number: 4 (lower is better)
Translates to: NILHKTHTAHRV*GKSGSLYIFTS
Trigger: TGAAGTGAATATATAGAGAGAGCCAGATTTCCCCAAAACTCTGTGAGCTGTGTGTGTTTTGTGTAGAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR TCA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCCATGGACTGTTCTGCTaGATTCTAATACATTGTACC +
Preference number: 4 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHIHGLFC*ILIHCT
Trigger: GGTACAATGTATTAGAATTCAGCAGAACAGTCCATG...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR TCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCGTCCAGGATTTCTTCTaGCTGGCTTTAATATTCATA +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLVQDFF*LALIFI
Trigger: TATGAATATTAAAGCCAGTCAGAAGAAATCCTGGAC...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCAACTTCATCAGGACCTaGATATTCATAAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLNFIRT*IFIKPS
Trigger: GCTTGGTTTTATGAATATGCAGGTCCTGATGAAGTT...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGTGCGTATACCAAGGATaGCTGTGCTTTCATAAATAT +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSCVYQG*LCFHKY
Trigger: ATATTTATGAAAGCACAGGCATCCTTGGTATACGCA...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTTCCACATACCTTGTATaGCTTGAAAACTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVSTYLV*LENSGV
Trigger: AACTCCAGAGTTTTCAAGGCATACAAGGTATGTGGA...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCTTACTAAGATCAGCATaGACTGTTCTGCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLLLRSA*TVLLNS
Trigger: AGAATTCAGCAGAACAGTCCATGCTGATCTTAGTAA...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGAGTTTTGGGGAAATCTaGCTCTCTCTATATATTCAC +
Preference number: 4 (lower is better)
Translates to: VFHPVQREVVLKILQQGSSFGEI*LSLYIH
Trigger: GTGAATATATAGAGAGAGCCAGATTTCCCCAAAACT...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCATCAGCATATCCTTTTaGTGCTACCACCAAAATACA +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLISISF*CYHQNT
Trigger: TGTATTTTGGTGGTAGCACCAAAAGGATATGCTGAT...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTGGAATTTTCCACTTGTaGCATCATGTCAACACTCAA +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVGIFHL*HHVNTQ
Trigger: TTGAGTGTTGACATGATGCCACAAGTGGAAAATTCC...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCCCTGATCATGAGATTTaGTGGCTTCACATATTTACT +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLPDHEI*WLHIFT
Trigger: AGTAAATATGTGAAGCCACCAAATCTCATGATCAGG...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGTGCTTTTCTATACTGTaGATAGTTCTGAGTACTGGT +
Preference number: 4 (lower is better)
Translates to: LTGFNIHICGGRPSISNLCFSIL*IVLSTG
Trigger: ACCAGTACTCAGAACTATCCACAGTATAGAAAAGCA...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCTTTGTAACTTTTCTGTaGAGTCACACTGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLFVTFL*SHTVMK
Trigger: CTTCATTACAGTGTGACTGCACAGAAAAGTTACAAA...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCCTGATCTTTATCCCTTaGAAAATCAAAGGCATATCT +
Preference number: 4 (lower is better)
Translates to: AINSHLWTIEPKINATKLLIFIP*KIKGIS
Trigger: AGATATGCCTTTGATTTTGCAAGGGATAAAGATCAG...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGTGTATTCTGAATCTGTaGTATTCCACATACCTTGTA +
Preference number: 4 (lower is better)
Translates to: LTGFNIHICGGRPSISNLCILNL*YSTYLV
Trigger: TACAAGGTATGTGGAATAGCACAGATTCAGAATACA...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTATGTCACTCAAAAAGTaGTATTTCCTCAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVMSLKK*YFLKRE
Trigger: TTCCCTCTTGAGGAAATACCACTTTTTGAGTGACAT...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp CTGACTGGCTTTAATATTCATATATGTGGTGGAAGACCCTCTATATCAAATCTGACACCAACCACTTCTTaGCTTTTTATAGAGAGAATA +
Preference number: 4 (lower is better)
Translates to: LTGFNIHICGGRPSISNLTPTTS*LFIERI
Trigger: TATTCTCTCTATAAAAAGCCAAGAAGTGGTTGGTGT...CAGATTTGATATAGAGGGTCTTCCACCACATATATGAATATTAAAGCCAGTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTAACTTTGGAGTCTCATaGGAGTTCCAAAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVNFGVS*EFQSFS
Trigger: AGAAAAACTTTGGAACTCCCATGAGACTCCAAAGTT...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
3UTR CAA 72 bp TCGTGCCCTGCAATATATTCAGGCCTAGAATACTTCTaGGCATATAGTAGATGCTTGAGATTTGTTAAATTA +
Preference number: 4 (lower is better)
Translates to: SCPAIYSGLEYF*AYSRCLRFVKL
Trigger: TAATTTAACAAATCTCAAGCATCTACTATATGCCAAGAAGTATTCTAGGCCTGAATATATTGCAGGGCACGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR GCA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTACCATTTCACTATACTaGCTACAAAGAAAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVTISLY*LQRKQV
Trigger: TACTTGCTTTCTTTGTAGGCAGTATAGTGAAATGGT...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS TCA 90 bp CAGCCCGGCCGCCGCCCGCTCCCAGGTATCCTCGTCGTCTTTCTCTaGCCGGGACAGGGCTGGCTCCTCGCCGGTGGACACTGCGGTTCG +
Preference number: 5 (lower is better)
Translates to: QPGRRPLPGILVVFL*PGQGWLLAGGHCGS
Trigger: CGAACCGCAGTGTCCACCGGCGAGGAGCCAGCCCTGTCCCGGTCAGAGAAAGACGACGAGGATACCTGGGAGCGGGCGGCGGCCGGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260247.10
ENST00000525420.1
ENST00000527576.5
ENST00000527779.1
ENST00000529076.1
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTACTCCTTTTCCTCCAGTaGTCCAGCAAAGGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: GTGKILKTVAMSSQAEELLLFLQ*SSKGGR
Trigger: CCTCCCTCCTTTGCTGGACAACTGGAGGAAAAGGAG...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp GATACTTTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCCTCCTTTTCCTCCAGTaGTCCAGCAAAGGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: DTLIAPGTGKILKTVAMSLLFLQ*SSKGGR
Trigger: CCTCCCTCCTTTGCTGGACAACTGGAGGAAAAGGAG...GGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAAAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACAGAGATTTTACACTTTTaGAGGCCTCCGTCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: WDTGWFEKECTNRPAASTEILHF*RPPSSA
Trigger: AGCGGAAGACGGAGGCCTCAAAAAGTGTAAAATCTC...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGAGATTTTACACTTTTaGAGGCCTCCGTCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQEILHF*RPPSSA
Trigger: AGCGGAAGACGGAGGCCTCAAAAAGTGTAAAATCTC...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp ACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATAGATTTAGCAGAGATTTTACACTTTTaGAGGCCTCCGTCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: TENSGHVLPSRRANIDLAEILHF*RPPSSA
Trigger: AGCGGAAGACGGAGGCCTCAAAAAGTGTAAAATCTC...TGCTAAATCTATGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp GGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTACAAGCCAGGCACTTCTaGCTTGAAAAATGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GTGKILKTVAMSSQAEELQARHF*LEKCSS
Trigger: AGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTTG...TAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAACAGCTACTTGGGAGGTaGACGCACGAGAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKQLLGR*THENLL
Trigger: CAAGAGATTCTCGTGCGTCAACCTCCCAAGTAGCTG...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACAGATGCAGTAGAGATCTaGGGCATTCCAGAGACAAAG +
Preference number: 5 (lower is better)
Translates to: WDTGWFEKECTNRPAASTDAVEI*GIPETK
Trigger: CTTTGTCTCTGGAATGCCCAAGATCTCTACTGCATC...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp ACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACACAAGCCAGGCACTTCTaGCTTGAAAAATGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: TGKILKTVAMSSQAEELTQARHF*LEKCSS
Trigger: AGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTTG...TGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAGAGATTTTACACTTTTaGAGGCCTCCGTCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKEILHF*RPPSSA
Trigger: AGCGGAAGACGGAGGCCTCAAAAAGTGTAAAATCTC...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTGAGATTTTACACTTTTaGAGGCCTCCGTCTTCCGCT +
Preference number: 5 (lower is better)
Translates to: FPLITLACIHVGIERFAFEILHF*RPPSSA
Trigger: AGCGGAAGACGGAGGCCTCAAAAAGTGTAAAATCTC...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp GCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAATCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC +
Preference number: 5 (lower is better)
Translates to: APGTGKILKTVAMSSQAESDLYP*QNQRHI
Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...TTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp TTGATTGCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAATGTCTGACGGACTTTTaGCCACTCAACAAATTCATC +
Preference number: 5 (lower is better)
Translates to: LIAPGTGKILKTVAMSSQCLTDF*PLNKFI
Trigger: GATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACA...TTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGCAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp GCTCCAGGTACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGTATACACGTGGGAATaGAAAGGTTTGCATTTTCTT +
Preference number: 5 (lower is better)
Translates to: APGTGKILKTVAMSSQAEVYTWE*KGLHFL
Trigger: AAGAAAATGCAAACCTTTCAATTCCCACGTGTATAC...TTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGTACCTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CAA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACACATCTGCATAAGACCTaGGCAGCTTTTATAGAAACC +
Preference number: 5 (lower is better)
Translates to: WDTGWFEKECTNRPAASTHLHKT*AAFIET
Trigger: GGTTTCTATAAAAGCTGCCAAGGTCTTATGCAGATG...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCGTTCTGCAAATGCTTTaGACAACCTACCATGAGTCA +
Preference number: 5 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSVLQML*TTYHES
Trigger: TGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAAC...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCACCTGTGACATAACTTaGGAGTCTCATGGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGTCDIT*ESHGSS
Trigger: GGAACTCCCATGAGACTCCAAAGTTATGTCACAGGT...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCCTCCTTTTCCTCCAGTaGTCCAGCAAAGGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHILLFLQ*SSKGGR
Trigger: CCTCCCTCCTTTGCTGGACAACTGGAGGAAAAGGAG...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAACAAGCCAGGCACTTCTaGCTTGAAAAATGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKQARHF*LEKCSS
Trigger: AGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTTG...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531571.5
CDS-3UTR CAA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACAGGGATACTGGATGGTTaGAAAAGGAATGTACAAACA +
Preference number: 5 (lower is better)
Translates to: WDTGWFEKECTNRPAASTGILDG*KRNVQT
Trigger: TGTTTGTACATTCCTTTTCAAACCATCCAGTATCCC...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCACAGCTCACAGAGTTTaGGGGAAATCTGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: AINSHLWTIEPKINATKLTAHRV*GKSGSL
Trigger: GAGAGAGCCAGATTTCCCCAAAACTCTGTGAGCTGT...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCTTGTGTGATGGGCACTaGGAGGCACCAAAAATAAGT +
Preference number: 5 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGLCDGH*EAPKIS
Trigger: ACTTATTTTTGGTGCCTCCAAGTGCCCATCACACAA...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCAGGTTTATCTTGTGGTTaGCTTCTTCTGACAAGGCAG +
Preference number: 5 (lower is better)
Translates to: FFPLITLACIHVGIERFAGLSCG*LLLTRQ
Trigger: CTGCCTTGTCAGAAGAAGCAAACCACAAGATAAACC...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TTTCTTCACATAGTTCTTGCTATGATGTCTGACGGACTTTTTGCCACTCAACAACAAGCCAGGCACTTCTaGCTTGAAAAATGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: FLHIVLAMMSDGLFATQQQARHF*LEKCSS
Trigger: AGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTTG...TTGTTGAGTGGCAAAAAGTCCGTCAGACATCATAGCAAGAACTATGTGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CAA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC +
Preference number: 5 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSSDLYP*QNQRHI
Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp ACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACATCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC +
Preference number: 5 (lower is better)
Translates to: TGKILKTVAMSSQAEELTSDLYP*QNQRHI
Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...TGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAATGTCTGACGGACTTTTaGCCACTCAACAAATTCATC +
Preference number: 5 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKCLTDF*PLNKFI
Trigger: GATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACA...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTGTCTGACGGACTTTTaGCCACTCAACAAATTCATC +
Preference number: 5 (lower is better)
Translates to: FPLITLACIHVGIERFAFCLTDF*PLNKFI
Trigger: GATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACA...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTTGTCTGACGGACTTTTaGCCACTCAACAAATTCATC +
Preference number: 5 (lower is better)
Translates to: PLITLACIHVGIERFAFSCLTDF*PLNKFI
Trigger: GATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACA...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp ACTGGTAAAATACTGAAAACAGTGGCCATGTCCTCCCAAGCAGAAGAGCTAACAGTATACACGTGGGAATaGAAAGGTTTGCATTTTCTT +
Preference number: 5 (lower is better)
Translates to: TGKILKTVAMSSQAEELTVYTWE*KGLHFL
Trigger: AAGAAAATGCAAACCTTTCAATTCCCACGTGTATAC...TGTTAGCTCTTCTGCTTGGGAGGACATGGCCACTGTTTTCAGTATTTTACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529281.5
ENST00000531571.5
CDS-3UTR CAA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCCATCAGCAGACTATGTaGCCAAATATTAAGACTGTT +
Preference number: 5 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSHQQTM*PNIKTV
Trigger: AACAGTCTTAATATTTGGCAACATAGTCTGCTGATG...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACACAGTTCAGATGTGCCTaGAAGAGTCAACTAAATTAT +
Preference number: 5 (lower is better)
Translates to: WDTGWFEKECTNRPAASTQFRCA*KSQLNY
Trigger: ATAATTTAGTTGACTCTTCAAGGCACATCTGAACTG...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTGCTATTCCACATACCTaGTATGCCTTGAAAACTCTG +
Preference number: 5 (lower is better)
Translates to: FPLITLACIHVGIERFAFAIPHT*YALKTL
Trigger: CAGAGTTTTCAAGGCATACAAGGTATGTGGAATAGC...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TGGGATACTGGATGGTTTGAAAAGGAATGTACAAACAGGCCTGCTGCTAGTACAACTCTTAATCTCAAATaGTACCATTTGTCACCTGGA +
Preference number: 5 (lower is better)
Translates to: WDTGWFEKECTNRPAASTTLNLK*YHLSPG
Trigger: TCCAGGTGACAAATGGTACAATTTGAGATTAAGAGT...TGTACTAGCAGCAGGCCTGTTTGTACATTCCTTTTCAAACCATCCAGTATCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp AGTCTAAGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCAACACCAACCACTTCTaGGCTTTTTATAGAGAGAAT +
Preference number: 5 (lower is better)
Translates to: SLRRGVAQCPSHVTRKTSNTNHF*AFYREN
Trigger: ATTCTCTCTATAAAAAGCCAAGAAGTGGTTGGTGTT...GGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCTTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCTCTGCATGGTTTATCTaGTGGTTTGCTTCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGSAWFI*WFASSD
Trigger: GTCAGAAGAAGCAAACCACAAGATAAACCATGCAGA...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TTTTTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCACATACCTTGTATGCCTaGAAAACTCTGGAGTTATCT +
Preference number: 5 (lower is better)
Translates to: FFPLITLACIHVGIERFAHTLYA*KTLELS
Trigger: AGATAACTCCAGAGTTTTCAAGGCATACAAGGTATG...TGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAACAACTTATCCAAGGTTaGGGGCAGAAATTCATCTTT +
Preference number: 5 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKQLIQG*GQKFIF
Trigger: AAAGATGAATTTCTGCCCCAAACCTTGGATAAGTTG...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAGAACAGAGTAAACTGTaGTACACCTGCATTTTGACT +
Preference number: 5 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKEQSKL*YTCILT
Trigger: AGTCAAAATGCAGGTGTACAACAGTTTACTCTGTTC...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTCAAGCCAGGCACTTCTaGCTTGAAAAATGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVQARHF*LEKCSS
Trigger: AGAGGAACATTTTTCAAGCAAGAAGTGCCTGGCTTG...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC +
Preference number: 5 (lower is better)
Translates to: FPLITLACIHVGIERFAFSDLYP*QNQRHI
Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTTCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC +
Preference number: 5 (lower is better)
Translates to: PLITLACIHVGIERFAFSSDLYP*QNQRHI
Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTGTATACACGTGGGAATaGAAAGGTTTGCATTTTCTT +
Preference number: 5 (lower is better)
Translates to: FPLITLACIHVGIERFAFVYTWE*KGLHFL
Trigger: AAGAAAATGCAAACCTTTCAATTCCCACGTGTATAC...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp AGAAGAGGTGTGGCTCAATGCCCATCACATGTAACAAGAAAAACCTCCTTTAAAGTATACACGTGGGAATaGAAAGGTTTGCATTTTCTT +
Preference number: 5 (lower is better)
Translates to: RRGVAQCPSHVTRKTSFKVYTWE*KGLHFL
Trigger: AAGAAAATGCAAACCTTTCAATTCCCACGTGTATAC...TTTAAAGGAGGTTTTTCTTGTTACATGTGATGGGCATTGAGCCACACCTCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000527260.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp CCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCTGTATACACGTGGGAATaGAAAGGTTTGCATTTTCTT +
Preference number: 5 (lower is better)
Translates to: PLITLACIHVGIERFAFSVYTWE*KGLHFL
Trigger: AAGAAAATGCAAACCTTTCAATTCCCACGTGTATAC...AGAAAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260247.10
ENST00000529281.5
ENST00000531543.1
ENST00000531571.5
CDS-3UTR CAA 90 bp CGTAAGTTTTATTCAGTTCTGCAAATGCTTTTGACAACCTACCATGAGTCAGGCAAATTAGACTGCTTTTaGGGCTTCCACCATACTAAT +
Preference number: 5 (lower is better)
Translates to: RKFYSVLQMLLTTYHESGKLDCF*GFHHTN
Trigger: ATTAGTATGGTGGAAGCCCAAAAAGCAGTCTAATTT...GCCTGACTCATGGTAGGTTGTCAAAAGCATTTGCAGAACTGAATAAAACTTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCAGTAAAGTCCTACTCTaGAGAAAGGGCTATAATGCC +
Preference number: 5 (lower is better)
Translates to: AINSHLWTIEPKINATKLSKVLL*RKGYNA
Trigger: GGCATTATAGCCCTTTCTCAAGAGTAGGACTTTACT...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TTCCCCCTCATCACATTAGCTTGTATACACGTGGGAATTGAAAGGTTTGCATTTTCACAAAAGTTGGCCTaGAATTTCATCGATCATATG +
Preference number: 5 (lower is better)
Translates to: FPLITLACIHVGIERFAFSQKLA*NFIDHM
Trigger: CATATGATCGATGAAATTCAAGGCCAACTTTTGTGA...AAATGCAAACCTTTCAATTCCCACGTGTATACAAGCTAATGTGATGAGGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTTGTCTGACGGACTTTTaGCCACTCAACAAATTCATC +
Preference number: 5 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVCLTDF*PLNKFI
Trigger: GATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACA...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCTGTCTGACGGACTTTTaGCCACTCAACAAATTCATC +
Preference number: 5 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHICLTDF*PLNKFI
Trigger: GATGAATTTGTTGAGTGGCAAAAAGTCCGTCAGACA...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTGGCCTAGAATACTTCTaGGCATATAGTAGATGCTTG +
Preference number: 5 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVGLEYF*AYSRCL
Trigger: CAAGCATCTACTATATGCCAAGAAGTATTCTAGGCC...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TCTGACAGACAAGTCTACCATAACATATCCAAAAGTAAACTCTCAATCTACCCGTTCAACCTGCGCTGTTaGGCTATATTAATTCATGTA +
Preference number: 5 (lower is better)
Translates to: SDRQVYHNISKSKLSIYPFNLRC*AILIHV
Trigger: TACATGAATTAATATAGCCAAACAGCGCAGGTTGAA...CGGGTAGATTGAGAGTTTACTTTTGGATATGTTATGGTAGACTTGTCTGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp GCTATTAACTCCCATTTATGGACCATAGAGCCAAAAATAAATGCAACAAAGCTCGAATGTAGGTGCAGGTaGAATATCTCTTATCCAAAA +
Preference number: 5 (lower is better)
Translates to: AINSHLWTIEPKINATKLECRCR*NISYPK
Trigger: TTTTGGATAAGAGATATTCAACCTGCACCTACATTC...GAGCTTTGTTGCATTTATTTTTGGCTCTATGGTCCATAAATGGGAGTTAATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp GTATTTCATCCTGTACAAAGGGAAGTAGTTCTGAAAATTTTACAACAGGGTTCGATTTCCCTTATTCAGTaGGTGGTCTGTCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: VFHPVQREVVLKILQQGSISLIQ*VVCHLF
Trigger: AAAAAGATGACAGACCACCAACTGAATAAGGGAAAT...CGAACCCTGTTGTAAAATTTTCAGAACTACTTCCCTTTGTACAGGATGAAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp TATCAATATCAAGGCTTCTCTGATCTTTATCCCTTGCAAAATCAAAGGCATATCTCTGATCTTTATCCCTaGCAAAATCAAAGGCATATC +
Preference number: 5 (lower is better)
Translates to: YQYQGFSDLYPLQNQRHISDLYP*QNQRHI
Trigger: GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGA...GATATGCCTTTGATTTTGCAAGGGATAAAGATCAGAGAAGCCTTGATATTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527576.5
ENST00000527779.1
ENST00000529281.5
ENST00000529294.5
ENST00000531571.5
CDS-3UTR CAA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTTCCTATGAGGTTCAATaGATGTTTTTCCAGATAGCA +
Preference number: 5 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVSYEVQ*MFFQIA
Trigger: TGCTATCTGGAAAAACATCAATTGAACCTCATAGGA...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260247.10
CDS-3UTR CAA 90 bp AATAAGATACCTTGGGGATGGGACCCAAGTCTAAACATGAAATTCATTTATGTTTACTCCAAGTCTCTCTaGGTAGTTCTTACATATCAT +
Preference number: 5 (lower is better)
Translates to: NKIPWGWDPSLNMKFIYVYSKSL*VVLTYH
Trigger: ATGATATGTAAGAACTACCAAGAGAGACTTGGAGTA...AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGGTATCTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260247.10