RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCUN1D4 (Homo sapiens)

Ensembl gene IDs: ENSG00000109184

Ensembl transcript IDs: ENST00000334635.10, ENST00000381441.7, ENST00000451288.6, ENST00000477560.5, ENST00000502930.5, ENST00000504113.5, ENST00000504661.1, ENST00000505403.5, ENST00000505634.5, ENST00000506673.5, ENST00000507741.5, ENST00000509068.5, ENST00000509376.5, ENST00000510808.1, ENST00000511675.5, ENST00000512199.5, ENST00000513800.5

Found 508 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCGCTGGTCCTTTTCCTGGACGTCAAGGGCAGATGCGGGCCCTaGTGCTGCCCCTCCTCGCTGGCTCTCAATCTCATCATCCTACAT +
Preference number: 1 (lower is better)
Translates to: AALVLFLDVKGRCGP*CCPSSLALNLIILH
Trigger: ATGTAGGATGATGAGATTGAGAGCCAGCGAGGAGGGGCAGCAGCAGGGCCCGCATCTGCCCTTGACGTCCAGGAAAAGGACCAGCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512199.5
3UTR CCA 90 bp TGGACGTCAAGGGCAGATGCGGGCCCTGCTGCTGCCCCTCCTCGCTaGCTCTCAATCTCATCATCCTACATTGACAGGCCTGGACCAGAT +
Preference number: 1 (lower is better)
Translates to: WTSRADAGPAAAPPR*LSISSSYIDRPGPD
Trigger: ATCTGGTCCAGGCCTGTCAATGTAGGATGATGAGATTGAGAGCCAGCGAGGAGGGGCAGCAGCAGGGCCCGCATCTGCCCTTGACGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512199.5
3UTR CCA 90 bp AACAGTCCCAACATGCACTTGGCAGTGTTTATGTCTAGGCTGCGCTaGTCCTTTTCTCCTGCTCTGCAAGGGTGCCAGCCAGCAGCTCGC +
Preference number: 1 (lower is better)
Translates to: NSPNMHLAVFMSRLR*SFSPALQGCQPAAR
Trigger: GCGAGCTGCTGGCTGGCACCCTTGCAGAGCAGGAGAAAAGGACCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477560.5
3UTR GCA 90 bp TGGCAGTGTTTATGTCTAGGCTGCGCTGGTCCTTTTCTCCTGCTCTaGAAGGGTGCCAGCCAGCAGCTCGCAATCACTAACACCATCTTC +
Preference number: 1 (lower is better)
Translates to: WQCLCLGCAGPFLLL*KGASQQLAITNTIF
Trigger: GAAGATGGTGTTAGTGATTGCGAGCTGCTGGCTGGCACCCTTGCAGAGCAGGAGAAAAGGACCAGCGCAGCCTAGACATAAACACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477560.5
3UTR CCA 90 bp GCCCCTCTAGGACAGGTCCTAGCATGTACTGGGTTAGCTCAATGCTaGTGGTTTCTTGTCCACTGCCTGCAATGGACATGCTGCCAGGAA +
Preference number: 1 (lower is better)
Translates to: APLGQVLACTGLAQC*WFLVHCLQWTCCQE
Trigger: TTCCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAACCCAGTACATGCTAGGACCTGTCCTAGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CCA 90 bp CCTCTAGGACAGGTCCTAGCATGTACTGGGTTAGCTCAATGCTGGTaGTTTCTTGTCCACTGCCTGCAATGGACATGCTGCCAGGAAAAG +
Preference number: 1 (lower is better)
Translates to: PLGQVLACTGLAQCW*FLVHCLQWTCCQEK
Trigger: CTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAACCCAGTACATGCTAGGACCTGTCCTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CCA 90 bp CAGGTAATGAAAAGTGGCCCCTCTAGGACAGGTCCTAGCATGTACTaGGTTAGCTCAATGCTGGTGGTTTCTTGTCCACTGCCTGCAATG +
Preference number: 1 (lower is better)
Translates to: QVMKSGPSRTGPSMY*VSSMLVVSCPLPAM
Trigger: CATTGCAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAACCCAGTACATGCTAGGACCTGTCCTAGAGGGGCCACTTTTCATTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR GCA 90 bp CTAGCATGTACTGGGTTAGCTCAATGCTGGTGGTTTCTTGTCCACTaGCTGCAATGGACATGCTGCCAGGAAAAGCCTAGCATGAAACAA +
Preference number: 1 (lower is better)
Translates to: LACTGLAQCWWFLVH*LQWTCCQEKPSMKQ
Trigger: TTGTTTCATGCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAACCCAGTACATGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CCA 90 bp ACTGGGTTAGCTCAATGCTGGTGGTTTCTTGTCCACTGCCTGCAATaGACATGCTGCCAGGAAAAGCCTAGCATGAAACAAACAAACAAG +
Preference number: 1 (lower is better)
Translates to: TGLAQCWWFLVHCLQ*TCCQEKPSMKQTNK
Trigger: CTTGTTTGTTTGTTTCATGCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CCA 90 bp AGCGTACAATGTGGCCTCCAGTTGATCCGTCATTGTAGGCACATGTaGCCACACCATTTTGTAAGCATCTGGCTTACTGTACCTTTTACA +
Preference number: 1 (lower is better)
Translates to: SVQCGLQLIRHCRHM*PHHFVSIWLTVPFT
Trigger: TGTAAAAGGTACAGTAAGCCAGATGCTTACAAAATGGTGTGGCCACATGTGCCTACAATGACGGATCAACTGGAGGCCACATTGTACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR GCA 90 bp GTGAGGACGTTGGCAAATTCACCAATCTGTAGTGTAAATACAAACTaGAAAGCAGCCTTCCAAGAGAACAATGCCACACAGCAAGCAGAG +
Preference number: 1 (lower is better)
Translates to: VRTLANSPICSVNTN*KAAFQENNATQQAE
Trigger: CTCTGCTTGCTGTGTGGCATTGTTCTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAACGTCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR CCA 90 bp CAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATaGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTG +
Preference number: 1 (lower is better)
Translates to: QCKRSSMRFDTNSNL*LMGDKTVVTVTLSL
Trigger: CAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
3UTR TCA 90 bp AGGTCTTCTCTTTTTCCTTGGTGGCATCACTTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAGACTTCCTGTTTGGTGATCGTCTTG +
Preference number: 1 (lower is better)
Translates to: RSSLFPWWHHFIKAV*RTARPQTSCLVIVL
Trigger: CAAGACGATCACCAAACAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
3UTR GCA 90 bp CAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTaGAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGG +
Preference number: 1 (lower is better)
Translates to: QFNSKHQHVPAKGKQ*KRSSMRFDTNSNLW
Trigger: CCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR CCA 90 bp ATCCGTCATTGTAGGCACATGTGGCCACACCATTTTGTAAGCATCTaGCTTACTGTACCTTTTACATACAAGAAATTAAATGAGAGAAAA +
Preference number: 1 (lower is better)
Translates to: IRHCRHMWPHHFVSI*LTVPFTYKKLNERK
Trigger: TTTTCTCTCATTTAATTTCTTGTATGTAAAAGGTACAGTAAGCCAGATGCTTACAAAATGGTGTGGCCACATGTGCCTACAATGACGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR CCA 90 bp AGGTCAAGATTAATTGTTCTGCTAAACTCTAGGACATTGCACCACTaGTCTTTATTAATAACTTTGTATTTTGATTGCCGTGCAAAGTCA +
Preference number: 1 (lower is better)
Translates to: RSRLIVLLNSRTLHH*SLLITLYFDCRAKS
Trigger: TGACTTTGCACGGCAATCAAAATACAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCTAGAGTTTAGCAGAACAATTAATCTTGACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509376.5
3UTR-3UTR GCA 90 bp GGGGCCAGATTTTTCCTAATAACAGTCCCAACATGCACTTGGCAGTGTTTATGTGGCAGATGCGGGCCCTaGTGCTGCCCCTCCTCGCTG +
Preference number: 2 (lower is better)
Translates to: GARFFLITVPTCTWQCLCGRCGP*CCPSSL
Trigger: CAGCGAGGAGGGGCAGCAGCAGGGCCCGCATCTGCC...ACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512199.5
3UTR CAA 90 bp CTACTGAGGGGCACGAAGGTACACAGCGTACAATGTGGCCTCCAGTaGATCCGTCATTGTAGGCACATGTGGCCACACCATTTTGTAAGC +
Preference number: 2 (lower is better)
Translates to: LLRGTKVHSVQCGLQ*IRHCRHMWPHHFVS
Trigger: GCTTACAAAATGGTGTGGCCACATGTGCCTACAATGACGGATCAACTGGAGGCCACATTGTACGCTGTGTACCTTCGTGCCCCTCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR-3UTR GCA 90 bp GCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCCCGACATCATACCATTaGACTCCAGCCTGGCGACAG +
Preference number: 2 (lower is better)
Translates to: AGQFNSKHQHVPAKGKQCPTSYH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAATGGTATGATGTCGG...GCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR-3UTR CCA 90 bp CCAAACCTGCCTAGGCCAGTCACCACTGCAAAACAAATGCATCCATCACATCAGGTCCACTGCCTGCAATaGACATGCTGCCAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: PNLPRPVTTAKQMHPSHQVHCLQ*TCCQEK
Trigger: CTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGAC...CTGATGTGATGGATGCATTTGTTTTGCAGTGGTGACTGGCCTAGGCAGGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR TCA 90 bp GCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAATGTGGCCTCCAGTTaGTCCGTCATTGTAGGCACA +
Preference number: 2 (lower is better)
Translates to: AGQFNSKHQHVPAKGKQCNVASS*SVIVGT
Trigger: TGTGCCTACAATGACGGATCAACTGGAGGCCACATT...GCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR-3UTR GCA 90 bp GGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGTGCCTGCAATGGACATaGTGCCAGGAAAAGCCTAGC +
Preference number: 2 (lower is better)
Translates to: GQFNSKHQHVPAKGKQCKCLQWT*CQEKPS
Trigger: GCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCA...CTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CCA 90 bp CCAAACCTGCCTAGGCCAGTCACCACTGCAAAACAAATGCATCCATCACATCAGGGGTTAGCTCAATGCTaGTGGTTTCTTGTCCACTGC +
Preference number: 2 (lower is better)
Translates to: PNLPRPVTTAKQMHPSHQGLAQC*WFLVHC
Trigger: GCAGTGGACAAGAAACCACCAGCATTGAGCTAACCC...CTGATGTGATGGATGCATTTGTTTTGCAGTGGTGACTGGCCTAGGCAGGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR TCA 90 bp AATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCAATGTGGCCTCCAGTTaGTCCGTCATTGTAGGCACA +
Preference number: 2 (lower is better)
Translates to: NSKHQHVPAKGKQCKRSSNVASS*SVIVGT
Trigger: TGTGCCTACAATGACGGATCAACTGGAGGCCACATT...GCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR-3UTR GCA 90 bp GTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACACTGGGTTAGCTCAATaGTGGTGGTTTCTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: VPAKGKQCKRSSMRFDTNTGLAQ*WWFLVH
Trigger: GTGGACAAGAAACCACCAGCATTGAGCTAACCCAGT...GTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CCA 90 bp GGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGGGGTTAGCTCAATGCTaGTGGTTTCTTGTCCACTGC +
Preference number: 2 (lower is better)
Translates to: GQFNSKHQHVPAKGKQCKGLAQC*WFLVHC
Trigger: GCAGTGGACAAGAAACCACCAGCATTGAGCTAACCC...CTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR TCA 90 bp CAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGCCTCTAAAAAGTTATaGCTCCTACCTCCTTCCAGA +
Preference number: 2 (lower is better)
Translates to: QQAELANSIANTNMSLRKASKKL*LLPPSR
Trigger: TCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGC...CTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000509376.5
3UTR-3UTR TCA 90 bp AGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTTGTCTTTATAGTGCAGGTAGGACGCTaGCACGAGAGACCAGAAACG +
Preference number: 2 (lower is better)
Translates to: SDSLAAMHKVLGHLFVFIVQVGR*HERPET
Trigger: CGTTTCTGGTCTCTCGTGTCAGCGTCCTACCTGCAC...TATAAAGACAAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507741.5
3UTR-3UTR CCA 90 bp ATAAAATCAAGACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTGTCCACTGCCTGCAATaGACATGCTGCCAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: IKSRQSRVSTLPLSSQRGVHCLQ*TCCQEK
Trigger: CTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGAC...ACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGTCTTGATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CCA 90 bp AGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAAGGCAGTTGGGTTAGCTCAATGCTaGTGGTTTCTTGTCCACTGC +
Preference number: 2 (lower is better)
Translates to: RVSTLPLSSQRGLFFKAVGLAQC*WFLVHC
Trigger: GCAGTGGACAAGAAACCACCAGCATTGAGCTAACCC...AACTGCCTTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR GCA 90 bp ACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 2 (lower is better)
Translates to: TASRAGQFNSKHQHVPAKAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...TTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR-3UTR GCA 90 bp CCAAACCTGCCTAGGCCAGTCACCACTGCAAAACAAATGCATCCATCACATCAGCAACTAGAAGTGCGATaGAGTTATAAACAGCCAGCA +
Preference number: 2 (lower is better)
Translates to: PNLPRPVTTAKQMHPSHQQLEVR*SYKQPA
Trigger: TGCTGGCTGTTTATAACTGCATCGCACTTCTAGTTG...CTGATGTGATGGATGCATTTGTTTTGCAGTGGTGACTGGCCTAGGCAGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR GCA 90 bp GCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT +
Preference number: 2 (lower is better)
Translates to: ANTNMSLRKGNSAREAACITVPT*TWQCLC
Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...GCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000512199.5
3UTR-3UTR GCA 90 bp CACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT +
Preference number: 2 (lower is better)
Translates to: HQHVPAKGKQCKRSSMRFITVPT*TWQCLC
Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...AAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000512199.5
3UTR-3UTR CCA 90 bp AGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAAGGCAGTTTTAGCTCAATGCTGGTaGTTTCTTGTCCACTGCCTG +
Preference number: 2 (lower is better)
Translates to: RVSTLPLSSQRGLFFKAVLAQCW*FLVHCL
Trigger: CAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAA...AACTGCCTTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTATGTCTAGGCTGCGCTaGTCCTTTTCCTGGACGTCA +
Preference number: 2 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGMSRLR*SFSWTS
Trigger: TGACGTCCAGGAAAAGGACCAGCGCAGCCTAGACAT...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512199.5
3UTR-3UTR TCA 90 bp AGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAAGGCAGTTAATCACGGATCTTGCTaGCCACGACAGCATTTACTT +
Preference number: 2 (lower is better)
Translates to: RVSTLPLSSQRGLFFKAVNHGSC*PRQHLL
Trigger: AAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATT...AACTGCCTTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR GCA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCACACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 2 (lower is better)
Translates to: LRKGNSAREAACALIQTAHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000509376.5
3UTR-3UTR CCA 90 bp TCTTGGCAGATAAATCATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCACATTGTAGGCACATGTaGCCACACCATTTTGTAAGC +
Preference number: 2 (lower is better)
Translates to: SWQINHLQRQVFSFSLVAHCRHM*PHHFVS
Trigger: GCTTACAAAATGGTGTGGCCACATGTGCCTACAATG...TGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTTATCTGCCAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509376.5
3UTR-3UTR TCA 90 bp TTAACTGTAACATCTCCCTCCTGTAACAATCCTCTCATTTTAGAATTAACTGTGAGCTACTCAGGAGGCTaGGGCAGGGGAAATCGCTTC +
Preference number: 2 (lower is better)
Translates to: LTVTSPSCNNPLILELTVSYSGG*GRGNRF
Trigger: GAAGCGATTTCCCCTGCCTCAGCCTCCTGAGTAGCT...CACAGTTAATTCTAAAATGAGAGGATTGTTACAGGAGGGAGATGTTACAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477560.5
3UTR-3UTR TCA 90 bp ATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCAATATTTGCCAGTGTTaGGAGATGAGAGTTCAGCTG +
Preference number: 2 (lower is better)
Translates to: MGDKTVVTVTLSLLCIKSNICQC*EMRVQL
Trigger: CAGCTGAACTCTCATCTCTCAACACTGGCAAATATT...GGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507741.5
3UTR-3UTR GCA 90 bp GGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 2 (lower is better)
Translates to: GNSAREAACALIQTAIYGAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...GCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
3UTR-3UTR GCA 90 bp TTTCCCTACCATCAAAATGTTGATTGTGGATTAACTGTAACATCTCCCTCCTGTTGCCTGCAATGGACATaGTGCCAGGAAAAGCCTAGC +
Preference number: 2 (lower is better)
Translates to: FPYHQNVDCGLTVTSPSCCLQWT*CQEKPS
Trigger: GCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCA...ACAGGAGGGAGATGTTACAGTTAATCCACAATCAACATTTTGATGGTAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR GCA 90 bp ATTTGGCATATGCCTCTAAAAAGTTATGACTCCTACCTCCTTCCAGAAGTTGGCACTGGGTTAGCTCAATaGTGGTGGTTTCTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: IWHMPLKSYDSYLLPEVGTGLAQ*WWFLVH
Trigger: GTGGACAAGAAACCACCAGCATTGAGCTAACCCAGT...GCCAACTTCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGCATATGCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR GCA 90 bp GTTTTTCTGTTGTATCACATTGGAGAGAAGTCATTCCTTTTAACCACTCCTGTACCGACATCATACCATTaGACTCCAGCCTGGCGACAG +
Preference number: 2 (lower is better)
Translates to: VFLLYHIGEKSFLLTTPVPTSYH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAATGGTATGATGTCGG...TACAGGAGTGGTTAAAAGGAATGACTTCTCTCCAATGTGATACAACAGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR-3UTR GCA 90 bp AACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGCACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 2 (lower is better)
Translates to: NCGNSDSLAAMHKVLGHLHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...CAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000509376.5
3UTR-3UTR GCA 90 bp AATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAACCAGAAACGGACGTGTaGACATTCACAAACACTCCT +
Preference number: 2 (lower is better)
Translates to: NSIANTNMSLRKGNSAREPETDV*TFTNTP
Trigger: AGGAGTGTTTGTGAATGTGCACACGTCCGTTTCTGG...TTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507741.5
3UTR-3UTR GCA 90 bp CTACTTTTCTTGGCAGATAAATCATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCTG +
Preference number: 2 (lower is better)
Translates to: LLFLADKSSPEAGLLFFLSSLKN*KTADFL
Trigger: CAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...AAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
3UTR-3UTR GCA 90 bp AGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTTGTCTTTATAAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCTG +
Preference number: 2 (lower is better)
Translates to: SDSLAAMHKVLGHLFVFISSLKN*KTADFL
Trigger: CAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...TATAAAGACAAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507741.5
3UTR-3UTR GCA 90 bp AGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAAGGCAGTTAGTGTAAATACAAACTaGAAAGCAGCCTTCCAAGAG +
Preference number: 2 (lower is better)
Translates to: RVSTLPLSSQRGLFFKAVSVNTN*KAAFQE
Trigger: CTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACT...AACTGCCTTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CCA 90 bp GCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 2 (lower is better)
Translates to: AELANSIANTNMSLRKGNTNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...GTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR-3UTR CCA 90 bp TGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 2 (lower is better)
Translates to: CHTASRAGQFNSKHQHVPTNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...AGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR-3UTR CCA 90 bp CATTCAATAGCACCAGATAGTTGGGGTGAAAACATGTCATCTCTATATTTCCTCGGTCCTAGCATGTACTaGGTTAGCTCAATGCTGGTG +
Preference number: 2 (lower is better)
Translates to: HSIAPDSWGENMSSLYFLGPSMY*VSSMLV
Trigger: CACCAGCATTGAGCTAACCCAGTACATGCTAGGACC...GAGGAAATATAGAGATGACATGTTTTCACCCCAACTATCTGGTGCTATTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR GCA 90 bp GGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGCTCTCACTTATAGTATaGTTGTTTTCTCAAAAGGCT +
Preference number: 2 (lower is better)
Translates to: GQFNSKHQHVPAKGKQCKLSLIV*LFSQKA
Trigger: AGCCTTTTGAGAAAACAAGCATACTATAAGTGAGAG...CTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR GCA 90 bp GGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCCAACAAAACTGGCCATaGTCCATCTTCATCATAGTT +
Preference number: 2 (lower is better)
Translates to: GNSAREAACALIQTAIYGQQNWP*SIFIIV
Trigger: AACTATGATGAAGATGGAGCATGGCCAGTTTTGTTG...GCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000512199.5
3UTR-3UTR CCA 90 bp TCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAAGGACATTGCACCACTaGTCTTTATTAATAACTTTG +
Preference number: 2 (lower is better)
Translates to: SLRKGNSAREAACALIQTRTLHH*SLLITL
Trigger: CAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCT...TGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000512199.5
3UTR-3UTR CCA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAAGGACATTGCACCACTaGTCTTTATTAATAACTTTG +
Preference number: 2 (lower is better)
Translates to: LRKGNSAREAACALIQTARTLHH*SLLITL
Trigger: CAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCT...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000512199.5
3UTR-3UTR CCA 90 bp CTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCACATTTTGTAAGCATCTaGCTTACTGTACCTTTTACA +
Preference number: 2 (lower is better)
Translates to: LANSIANTNMSLRKGNSAHFVSI*LTVPFT
Trigger: TGTAAAAGGTACAGTAAGCCAGATGCTTACAAAATG...TGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR-3UTR GCA 90 bp ACAGTGAGGACGTTGGCAAATTCACCAATCTGTAGTGTAAATACAAACTGCAAAGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 2 (lower is better)
Translates to: TVRTLANSPICSVNTNCKAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...TTTGCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAACGTCCTCACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR-3UTR GCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT +
Preference number: 2 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGITVPT*TWQCLC
Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000512199.5
3UTR-3UTR CCA 90 bp TTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 2 (lower is better)
Translates to: FNSKHQHVPAKGKQCKRSTNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...GCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR-3UTR GCA 90 bp ATTCATAGAACCATTCCAAGCACCTTTTACTTGAAAAGGCTTCTTCTTCAGTCTGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 2 (lower is better)
Translates to: IHRTIPSTFYLKRLLLQSAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...AGACTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATGGTTCTATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000509376.5
3UTR-3UTR CCA 90 bp GGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 2 (lower is better)
Translates to: GNSAREAACALIQTAIYGTNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...GCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
3UTR-3UTR CCA 90 bp ATAAAATCAAGACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTCTGTTGTATCACATTaGAGAGAAGTCATTCCTTTT +
Preference number: 2 (lower is better)
Translates to: IKSRQSRVSTLPLSSQRGSVVSH*REVIPF
Trigger: AAAAGGAATGACTTCTCTCCAATGTGATACAACAGA...ACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGTCTTGATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477560.5
3UTR-3UTR CCA 90 bp TTAACTGTAACATCTCCCTCCTGTAACAATCCTCTCATTTTAGAATTAACTGTGCATTGTAGGCACATGTaGCCACACCATTTTGTAAGC +
Preference number: 2 (lower is better)
Translates to: LTVTSPSCNNPLILELTVHCRHM*PHHFVS
Trigger: GCTTACAAAATGGTGTGGCCACATGTGCCTACAATG...CACAGTTAATTCTAAAATGAGAGGATTGTTACAGGAGGGAGATGTTACAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477560.5
3UTR-3UTR GCA 90 bp ATGTTCAAATCACGGATCTTGCTGACCACGACAGCATTTACTTGTTCAAATGCACTCTCACTTATAGTATaGTTGTTTTCTCAAAAGGCT +
Preference number: 2 (lower is better)
Translates to: MFKSRILLTTTAFTCSNALSLIV*LFSQKA
Trigger: AGCCTTTTGAGAAAACAAGCATACTATAAGTGAGAG...TGCATTTGAACAAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CAA 90 bp TTCAGCAGTAAACATCTAAAGGTTGTATTCCATGACAACAGAGTATaGCAATGTGGAGTTCGAAACACAATAGAAAAAGAGAAAGGGTTG +
Preference number: 2 (lower is better)
Translates to: FSSKHLKVVFHDNRV*QCGVRNTIEKEKGL
Trigger: CAACCCTTTCTCTTTTTCTATTGTGTTTCGAACTCCACATTGCAATACTCTGTTGTCATGGAATACAACCTTTAGATGTTTACTGCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CCA 90 bp AAAAATAATGGCTATTGCCCTTCTGTACAAATAACTCAGGTAATGAAAAGTGGCACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 2 (lower is better)
Translates to: KNNGYCPSVQITQVMKSGTNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...GCCACTTTTCATTACCTGAGTTATTTGTACAGAAGGGCAATAGCCATTATTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR GCA 72 bp GTCCTTTTCCTGGACGTCAAGGGCAGATGCGGGCCCTaGTGCTGCCCCTCCTCGCTGGCTCTCAATCTCATC +
Preference number: 3 (lower is better)
Translates to: VLFLDVKGRCGP*CCPSSLALNLI
Trigger: GATGAGATTGAGAGCCAGCGAGGAGGGGCAGCAGCAGGGCCCGCATCTGCCCTTGACGTCCAGGAAAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512199.5
3UTR GCA 72 bp CTTTTCCTGGACGTCAAGGGCAGATGCGGGCCCTGCTaGTGCCCCTCCTCGCTGGCTCTCAATCTCATCATC +
Preference number: 3 (lower is better)
Translates to: LFLDVKGRCGPC*CPSSLALNLII
Trigger: GATGATGAGATTGAGAGCCAGCGAGGAGGGGCAGCAGCAGGGCCCGCATCTGCCCTTGACGTCCAGGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512199.5
3UTR CCA 72 bp AACATGCACTTGGCAGTGTTTATGTCTAGGCTGCGCTaGTCCTTTTCTCCTGCTCTGCAAGGGTGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: NMHLAVFMSRLR*SFSPALQGCQP
Trigger: TGGCTGGCACCCTTGCAGAGCAGGAGAAAAGGACCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477560.5
3UTR TCA 72 bp GCACGAAGGTACACAGCGTACAATGTGGCCTCCAGTTaGTCCGTCATTGTAGGCACATGTGGCCACACCATT +
Preference number: 3 (lower is better)
Translates to: ARRYTAYNVASS*SVIVGTCGHTI
Trigger: AATGGTGTGGCCACATGTGCCTACAATGACGGATCAACTGGAGGCCACATTGTACGCTGTGTACCTTCGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR GCA 72 bp ACTGGGTTAGCTCAATGCTGGTGGTTTCTTGTCCACTaGCTGCAATGGACATGCTGCCAGGAAAAGCCTAGC +
Preference number: 3 (lower is better)
Translates to: TGLAQCWWFLVH*LQWTCCQEKPS
Trigger: GCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAACCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CCA 72 bp CAGGTCCTAGCATGTACTGGGTTAGCTCAATGCTGGTaGTTTCTTGTCCACTGCCTGCAATGGACATGCTGC +
Preference number: 3 (lower is better)
Translates to: QVLACTGLAQCW*FLVHCLQWTCC
Trigger: GCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAACCCAGTACATGCTAGGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CCA 72 bp GGACAGGTCCTAGCATGTACTGGGTTAGCTCAATGCTaGTGGTTTCTTGTCCACTGCCTGCAATGGACATGC +
Preference number: 3 (lower is better)
Translates to: GQVLACTGLAQC*WFLVHCLQWTC
Trigger: GCATGTCCATTGCAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAACCCAGTACATGCTAGGACCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CAA 90 bp GGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGGCCGACATCATACCATaGCACTCCAGCCTGGCGACA +
Preference number: 3 (lower is better)
Translates to: GQFNSKHQHVPAKGKQCKADIIP*HSSLAT
Trigger: TGTCGCCAGGCTGGAGTGCAATGGTATGATGTCGGC...CTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR CCA 72 bp AAAAGTGGCCCCTCTAGGACAGGTCCTAGCATGTACTaGGTTAGCTCAATGCTGGTGGTTTCTTGTCCACTG +
Preference number: 3 (lower is better)
Translates to: KSGPSRTGPSMY*VSSMLVVSCPL
Trigger: CAGTGGACAAGAAACCACCAGCATTGAGCTAACCCAGTACATGCTAGGACCTGTCCTAGAGGGGCCACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CCA 72 bp GCTCAATGCTGGTGGTTTCTTGTCCACTGCCTGCAATaGACATGCTGCCAGGAAAAGCCTAGCATGAAACAA +
Preference number: 3 (lower is better)
Translates to: AQCWWFLVHCLQ*TCCQEKPSMKQ
Trigger: TTGTTTCATGCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCACCAGCATTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CAA 90 bp GCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 3 (lower is better)
Translates to: ATQQAELANSIANTNMSLITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...CAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR-3UTR CAA 90 bp GATCCAAACCTGCCTAGGCCAGTCACCACTGCAAAACAAATGCATCCATCACATAATGCTGGTGGTTTCTaGTCCACTGCCTGCAATGGA +
Preference number: 3 (lower is better)
Translates to: DPNLPRPVTTAKQMHPSHNAGGF*STACNG
Trigger: TCCATTGCAGGCAGTGGACAAGAAACCACCAGCATT...ATGTGATGGATGCATTTGTTTTGCAGTGGTGACTGGCCTAGGCAGGTTTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR GCA 72 bp TGCTGGTGGTTTCTTGTCCACTGCCTGCAATGGACATaGTGCCAGGAAAAGCCTAGCATGAAACAAACAAAC +
Preference number: 3 (lower is better)
Translates to: CWWFLVHCLQWT*CQEKPSMKQTN
Trigger: GTTTGTTTGTTTCATGCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CAA 90 bp TCTCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCATCACTTTATTAAAGCAGCCGCAGACTTCCTGTTaGGTGATCGTCTTGGCCAAT +
Preference number: 3 (lower is better)
Translates to: SPEAGLLFFLGGITLLKQPQTSC*VIVLAN
Trigger: ATTGGCCAAGACGATCACCAAACAGGAAGTCTGCGG...CTGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
3UTR-3UTR CAA 90 bp AGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 3 (lower is better)
Translates to: RAGQFNSKHQHVPAKGKQITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...CTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR GCA 72 bp AAAGGGGCCAGATTTTTCCTAATAACAGTCCCAACATaGACTTGGCAGTGTTTATGTCTAGGCTGCGCTGGT +
Preference number: 3 (lower is better)
Translates to: KGARFFLITVPT*TWQCLCLGCAG
Trigger: ACCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000507741.5
ENST00000512199.5
3UTR-3UTR CAA 90 bp CAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 3 (lower is better)
Translates to: QAELANSIANTNMSLRKGEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...TCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR-3UTR CAA 90 bp ATAAAATCAAGACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 3 (lower is better)
Translates to: IKSRQSRVSTLPLSSQRGITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...ACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGTCTTGATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CAA 90 bp CAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 3 (lower is better)
Translates to: QNCGNSDSLAAMHKVLGHITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...ATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
3UTR TCA 72 bp CTTTTTCCTTGGTGGCATCACTTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAGACTTCCTGTTTGGTG +
Preference number: 3 (lower is better)
Translates to: LFPWWHHFIKAV*RTARPQTSCLV
Trigger: CACCAAACAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
3UTR-3UTR CAA 90 bp TCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 3 (lower is better)
Translates to: SIANTNMSLRKGNSAREAEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...TGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
3UTR-3UTR CAA 90 bp ATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 3 (lower is better)
Translates to: MGDKTVVTVTLSLLCIKSEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...GGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000512199.5
3UTR-3UTR CAA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCATCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 3 (lower is better)
Translates to: LRKGNSAREAACALIQTASCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000509376.5
3UTR-3UTR CAA 90 bp AACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTCTGTTGTATCACATaGGAGAGAAGTCATTCCTTT +
Preference number: 3 (lower is better)
Translates to: NCGNSDSLAAMHKVLGHLFCCIT*ERSHSF
Trigger: AAAGGAATGACTTCTCTCCAATGTGATACAACAGAA...CAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
3UTR TCA 72 bp TTTCCAGTCATCACATGTTCAAATCACGGATCTTGCTaGCCACGACAGCATTTACTTGTTCAAATGCACCAT +
Preference number: 3 (lower is better)
Translates to: FPVITCSNHGSC*PRQHLLVQMHH
Trigger: ATGGTGCATTTGAACAAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAACATGTGATGACTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CCA 72 bp AGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATaGCTAATGGGTGACAAAACTGTGGTAACAGTGACT +
Preference number: 3 (lower is better)
Translates to: RSSMRFDTNSNL*LMGDKTVVTVT
Trigger: AGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
3UTR-3UTR CAA 90 bp ATTTGGCATATGCCTCTAAAAAGTTATGACTCCTACCTCCTTCCAGAAGTTGGCGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 3 (lower is better)
Translates to: IWHMPLKSYDSYLLPEVGEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...GCCAACTTCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGCATATGCCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000509376.5
3UTR-3UTR CAA 90 bp TTTCCCTACCATCAAAATGTTGATTGTGGATTAACTGTAACATCTCCCTCCTGTATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 3 (lower is better)
Translates to: FPYHQNVDCGLTVTSPSCITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...ACAGGAGGGAGATGTTACAGTTAATCCACAATCAACATTTTGATGGTAGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CAA 90 bp AAAAATAATGGCTATTGCCCTTCTGTACAAATAACTCAGGTAATGAAAAGTGGCAATGCTGGTGGTTTCTaGTCCACTGCCTGCAATGGA +
Preference number: 3 (lower is better)
Translates to: KNNGYCPSVQITQVMKSGNAGGF*STACNG
Trigger: TCCATTGCAGGCAGTGGACAAGAAACCACCAGCATT...GCCACTTTTCATTACCTGAGTTATTTGTACAGAAGGGCAATAGCCATTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR-3UTR CAA 90 bp AGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTTGTCTTTATAGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 3 (lower is better)
Translates to: SDSLAAMHKVLGHLFVFIEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...TATAAAGACAAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000512199.5
3UTR-3UTR CAA 90 bp AAATCATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCATCACTTTATTATCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 3 (lower is better)
Translates to: KSSPEAGLLFFLGGITLLSCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...TAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
3UTR-3UTR CAA 90 bp TTTCCCTACCATCAAAATGTTGATTGTGGATTAACTGTAACATCTCCCTCCTGTTCACTTATAGTATGCTaGTTTTCTCAAAAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: FPYHQNVDCGLTVTSPSCSLIVC*FSQKAG
Trigger: TCCAGCCTTTTGAGAAAACAAGCATACTATAAGTGA...ACAGGAGGGAGATGTTACAGTTAATCCACAATCAACATTTTGATGGTAGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CCA 72 bp TGTAGGCACATGTGGCCACACCATTTTGTAAGCATCTaGCTTACTGTACCTTTTACATACAAGAAATTAAAT +
Preference number: 3 (lower is better)
Translates to: CRHMWPHHFVSI*LTVPFTYKKLN
Trigger: ATTTAATTTCTTGTATGTAAAAGGTACAGTAAGCCAGATGCTTACAAAATGGTGTGGCCACATGTGCCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
3UTR-3UTR CAA 90 bp CATAGAACCATTCCAAGCACCTTTTACTTGAAAAGGCTTCTTCTTCAGTCTTTATCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 3 (lower is better)
Translates to: HRTIPSTFYLKRLLLQSLSCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...TAAAGACTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATGGTTCTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502930.5
ENST00000507741.5
ENST00000509376.5
3UTR-3UTR CAA 90 bp ATTCATAGAACCATTCCAAGCACCTTTTACTTGAAAAGGCTTCTTCTTCAGTCTTCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 3 (lower is better)
Translates to: IHRTIPSTFYLKRLLLQSSCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...AGACTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATGGTTCTATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502930.5
ENST00000507741.5
ENST00000509376.5
3UTR-3UTR CAA 90 bp AAAAATAATGGCTATTGCCCTTCTGTACAAATAACTCAGGTAATGAAAAGTGGCAAAATAACCCATGTTTaGTGCATCCAATTTCCAAGC +
Preference number: 3 (lower is better)
Translates to: KNNGYCPSVQITQVMKSGKITHV*CIQFPS
Trigger: GCTTGGAAATTGGATGCACAAAACATGGGTTATTTT...GCCACTTTTCATTACCTGAGTTATTTGTACAGAAGGGCAATAGCCATTATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR GCA 90 bp GCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCAGATGCGGGCCCTGCTaGTGCCCCTCCTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ANTNMSLRKGNSAREAACRCGPC*CPSSLA
Trigger: AGCCAGCGAGGAGGGGCAGCAGCAGGGCCCGCATCT...GCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512199.5
CDS-3UTR TCA 90 bp TCTTGGCAGATAAATCATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCAACCTCGGCTCGAAGCTaGGGACCCGCCGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SWQINHLQRQVFSFSLVATSARS*GPAAGH
Trigger: GTGCCCGGCGGCGGGTCCTCAGCTTCGAGCCGAGGT...TGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTTATCTGCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502930.5
ENST00000506673.5
ENST00000509376.5
CDS-3UTR GCA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCATGCGGGCCCTGCTGCTaGCCCTCCTCGCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LRKGNSAREAACALIQTACGPCC*PSSLAL
Trigger: GAGAGCCAGCGAGGAGGGGCAGCAGCAGGGCCCGCA...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512199.5
CDS-3UTR GCA 90 bp GCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGGCTACAGCCCAACGCTaGCTCCACCTCCATGCACCC +
Preference number: 4 (lower is better)
Translates to: ATQQAELANSIANTNMSLATAQR*LHLHAP
Trigger: GGGTGCATGGAGGTGGAGGCAGCGTTGGGCTGTAGC...CAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451288.6
CDS-3UTR TCA 90 bp AGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTGACAAAACCTCGGCTCGAAGCTaGGGACCCGCCGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: RSSMRFDTNSNLWLMGDKTSARS*GPAAGH
Trigger: GTGCCCGGCGGCGGGTCCTCAGCTTCGAGCCGAGGT...TTTGTCACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381441.7
ENST00000509376.5
CDS-3UTR GCA 90 bp GCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCGGCGGCATCCGAGTaGATTTTCAGGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: ANTNMSLRKGNSAREAACAAASE*IFRQLT
Trigger: TGTGAGCTGCCTGAAAATGCACTCGGATGCCGCCGC...GCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTGGCAGATGCGGGCCCTaGTGCTGCCCCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGGRCGP*CCPSSL
Trigger: CAGCGAGGAGGGGCAGCAGCAGGGCCCGCATCTGCC...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512199.5
CDS-3UTR CCA 90 bp GCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCTCTCGCCTTCTCCATTaGCTAAACCGCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ANTNMSLRKGNSAREAACSRLLH*LNRGSG
Trigger: CCCTGAGCCGCGGTTTAGCCAATGGAGAAGGCGAGA...GCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381441.7
ENST00000509376.5
CDS-3UTR CCA 90 bp GCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCCGCTGGTCCTTTTCCTaGACGTCAAGGGCAGATGCG +
Preference number: 4 (lower is better)
Translates to: ANTNMSLRKGNSAREAACRWSFS*TSRADA
Trigger: CGCATCTGCCCTTGACGTCCAGGAAAAGGACCAGCG...GCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512199.5
3UTR CAA 72 bp GGCACGAAGGTACACAGCGTACAATGTGGCCTCCAGTaGATCCGTCATTGTAGGCACATGTGGCCACACCAT +
Preference number: 4 (lower is better)
Translates to: GTKVHSVQCGLQ*IRHCRHMWPHH
Trigger: ATGGTGTGGCCACATGTGCCTACAATGACGGATCAACTGGAGGCCACATTGTACGCTGTGTACCTTCGTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR TCA 90 bp CAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATAGCTACTCAGGAGGCTaGGGCAGGGGAAATCGCTTC +
Preference number: 4 (lower is better)
Translates to: QHVPAKGKQCKRSSMRFDSYSGG*GRGNRF
Trigger: GAAGCGATTTCCCCTGCCTCAGCCTCCTGAGTAGCT...ATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR GCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCCCACATCCCCGGCCCTaGCCGCTACAGCCCAACGCT +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPPHPRP*PLQPNA
Trigger: AGCGTTGGGCTGTAGCGGGCAGGGCCGGGGATGTGG...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509068.5
CDS-3UTR GCA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCACCTGCTCTGCAAGGGTaGCAGCCAGCAGCTCGCAAT +
Preference number: 4 (lower is better)
Translates to: LRKGNSAREAACALIQTAPALQG*QPAARN
Trigger: ATTGCGAGCTGCTGGCTGGCACCCTTGCAGAGCAGG...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000505634.5
CDS-3UTR TCA 90 bp TTCTATACATGCTATCATGTCTACTTTTCTTGGCAGATAAATCATCTCCAGAGGACCTCGGCTCGAAGCTaGGGACCCGCCGCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: FYTCYHVYFSWQINHLQRTSARS*GPAAGH
Trigger: GTGCCCGGCGGCGGGTCCTCAGCTTCGAGCCGAGGT...CCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCATGTATAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502930.5
ENST00000506673.5
ENST00000509376.5
CDS-3UTR GCA 90 bp CACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTTTCTTGTCCACTGCCTaGAATGGACATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HQHVPAKGKQCKRSSMRFFLSTA*NGHAAR
Trigger: CCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAA...AAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp TCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAAAATCCTCACCCTTGTaGCCCGCTCGCTCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SIANTNMSLRKGNSAREAKSSPL*PARSLA
Trigger: AGCGAGCGAGCGAGCGGGGCACAAGGGTGAGGATTT...TGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451288.6
CDS-3UTR GCA 90 bp ATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCGCTCAGGGGCCGCCCTaGTGCGTCTCTCATTTGACA +
Preference number: 4 (lower is better)
Translates to: MGDKTVVTVTLSLLCIKSAQGPP*CVSHLT
Trigger: TGTCAAATGAGAGACGCAGCAGGGCGGCCCCTGAGC...GGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509376.5
CDS-3UTR CCA 90 bp GCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGATGTCTAGGCTGCGCTaGTCCTTTTCTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ATQQAELANSIANTNMSLMSRLR*SFSPAL
Trigger: CAGAGCAGGAGAAAAGGACCAGCGCAGCCTAGACAT...CAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000505634.5
CDS-3UTR GCA 90 bp TTGATCCGTCATTGTAGGCACATGTGGCCACACCATTTTGTAAGCATCTGGCTTGCGGCGGCATCCGAGTaGATTTTCAGGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: LIRHCRHMWPHHFVSIWLAAASE*IFRQLT
Trigger: TGTGAGCTGCCTGAAAATGCACTCGGATGCCGCCGC...AAGCCAGATGCTTACAAAATGGTGTGGCCACATGTGCCTACAATGACGGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR GCA 90 bp CAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATTGCCTGCAATGGACATaGTGCCAGGAAAAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: QHVPAKGKQCKRSSMRFDCLQWT*CQEKPS
Trigger: GCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCA...ATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp CAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGATGCCTGCAATGGACATaGTGCCAGGAAAAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: QAELANSIANTNMSLRKGCLQWT*CQEKPS
Trigger: GCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCA...TCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCGCTACAGCCCAACGCTaGCTCCACCTCCATGCACCC +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPATAQR*LHLHAP
Trigger: GGGTGCATGGAGGTGGAGGCAGCGTTGGGCTGTAGC...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509068.5
CDS-3UTR GCA 90 bp ATTTCAGTTAAGCTGGGAGTCACAGGACTTGCACACTTTTATGAATGTAATGCACCACATCCCCGGCCCTaGCCGCTACAGCCCAACGCT +
Preference number: 4 (lower is better)
Translates to: ISVKLGVTGLAHFYECNAPHPRP*PLQPNA
Trigger: AGCGTTGGGCTGTAGCGGGCAGGGCCGGGGATGTGG...TGCATTACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCAGCTTAACTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451288.6
CDS-3UTR GCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCCTGCCTCCACCTCCATaGACCCCGGACACTCCGATC +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPLPPPP*TPDTPI
Trigger: GATCGGAGTGTCCGGGGTGCATGGAGGTGGAGGCAG...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509068.5
CDS-3UTR CCA 90 bp AGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGATGTCTAGGCTGCGCTaGTCCTTTTCCTGGACGTCA +
Preference number: 4 (lower is better)
Translates to: SKHQHVPAKGKQCKRSSMMSRLR*SFSWTS
Trigger: TGACGTCCAGGAAAAGGACCAGCGCAGCCTAGACAT...CATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512199.5
CDS-3UTR GCA 90 bp CAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: QAELANSIANTNMSLRKGSSLKN*KTADFL
Trigger: CAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...TCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR GCA 90 bp TGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTTGTTTATGTCTAGGCTaGGCTGGTCCTTTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: CHTASRAGQFNSKHQHVPCLCLG*AGPFPV
Trigger: CACGGGAAAAGGACCAGCGCAGCCTAGACATAAACA...AGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000507741.5
CDS-3UTR GCA 90 bp CCAAACCTGCCTAGGCCAGTCACCACTGCAAAACAAATGCATCCATCACATCAGTGTTTATGTCTAGGCTaGGCTGGTCCTTTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: PNLPRPVTTAKQMHPSHQCLCLG*AGPFPV
Trigger: CACGGGAAAAGGACCAGCGCAGCCTAGACATAAACA...CTGATGTGATGGATGCATTTGTTTTGCAGTGGTGACTGGCCTAGGCAGGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334635.10
ENST00000451288.6
CDS-3UTR GCA 90 bp TGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTTGGTTTCTTGTCCACTaGCTGCAATGGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: CHTASRAGQFNSKHQHVPWFLVH*LQWTCC
Trigger: GCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCA...AGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCAAATCCTCACCCTTGTaGCCCGCTCGCTCGCTCGCT +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPKSSPL*PARSLA
Trigger: AGCGAGCGAGCGAGCGGGGCACAAGGGTGAGGATTT...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509068.5
CDS-3UTR GCA 90 bp AGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCCTTTTCTCCTGCTCTaGAAGGGTGCCAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SNLWLMGDKTVVTVTLSLPFLLL*KGASQQ
Trigger: CTGCTGGCTGGCACCCTTGCAGAGCAGGAGAAAAGG...CAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000505634.5
CDS-3UTR GCA 90 bp GCAGATAAATCATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCATCACTGCCATGTGGTGTGCCTaGTCTCCATTCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ADKSSPEAGLLFFLGGITAMWCA*SPFTFL
Trigger: GAGGAAGGTGAATGGAGAGCAGGCACACCACATGGC...AGTGATGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTTATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506673.5
CDS-3UTR CCA 90 bp GATCCAAACCTGCCTAGGCCAGTCACCACTGCAAAACAAATGCATCCATCACATATGTCTAGGCTGCGCTaGTCCTTTTCCCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: DPNLPRPVTTAKQMHPSHMSRLR*SFSRAK
Trigger: CTTTGCACGGGAAAAGGACCAGCGCAGCCTAGACAT...ATGTGATGGATGCATTTGTTTTGCAGTGGTGACTGGCCTAGGCAGGTTTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334635.10
ENST00000451288.6
CDS-3UTR TCA 90 bp GCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGACTTCCTGTTTGGTaGTCGTCTTGGCCAATGTCT +
Preference number: 4 (lower is better)
Translates to: AELANSIANTNMSLRKGNRLPVW*SSWPMS
Trigger: AGACATTGGCCAAGACGATCACCAAACAGGAAGTCT...GTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR TCA 90 bp CATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAGACTTCCTGTTTGGTaGTCGTCTTGGCCAATGTCT +
Preference number: 4 (lower is better)
Translates to: HVPAKGKQCKRSSMRFDTRLPVW*SSWPMS
Trigger: AGACATTGGCCAAGACGATCACCAAACAGGAAGTCT...TGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR TCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCAGCTACTCAGGAGGCTaGGGCAGGGGAAATCGCTTC +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPSYSGG*GRGNRF
Trigger: GAAGCGATTTCCCCTGCCTCAGCCTCCTGAGTAGCT...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000509068.5
ENST00000509376.5
CDS-3UTR TCA 90 bp AAAGGGGCCAGATTTTTCCTAATAACAGTCCCAACATGCACTTGGCAGTGTTTAGTGCAGGTAGGACGCTaGCACGAGAGACCAGAAACG +
Preference number: 4 (lower is better)
Translates to: KGARFFLITVPTCTWQCLVQVGR*HERPET
Trigger: CGTTTCTGGTCTCTCGTGTCAGCGTCCTACCTGCAC...TAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR GCA 90 bp ATCACTTTATTAAAGCAGTCTGAAGAACTGCAAGACCGCAGACTTCCTGTTTGGGCGGCGGCATCCGAGTaGATTTTCAGGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: ITLLKQSEELQDRRLPVWAAASE*IFRQLT
Trigger: TGTGAGCTGCCTGAAAATGCACTCGGATGCCGCCGC...CCAAACAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
CDS-3UTR GCA 90 bp AATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: NSKHQHVPAKGKQCKRSSSSLKN*KTADFL
Trigger: CAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...GCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR GCA 90 bp AAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCCTGGTCCTTTTCCCGTaGAAAGTCAAACGCATATCT +
Preference number: 4 (lower is better)
Translates to: KHQHVPAKGKQCKRSSMRLVLFP*KVKRIS
Trigger: AGATATGCGTTTGACTTTGCACGGGAAAAGGACCAG...GCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000507741.5
CDS-3UTR GCA 90 bp GTACAATGTGGCCTCCAGTTGATCCGTCATTGTAGGCACATGTGGCCACACCATGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 4 (lower is better)
Translates to: VQCGLQLIRHCRHMWPHHAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...ATGGTGTGGCCACATGTGCCTACAATGACGGATCAACTGGAGGCCACATTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR GCA 90 bp TGGCAGTGTTTATGTCTAGGCTGCGCTGGTCCTTTTCCCGTGCAAAGTCAAACGGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 4 (lower is better)
Translates to: WQCLCLGCAGPFPVQSQTAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...CGTTTGACTTTGCACGGGAAAAGGACCAGCGCAGCCTAGACATAAACACTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR GCA 90 bp GCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 4 (lower is better)
Translates to: ASRAGQFNSKHQHVPAKGAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...CCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR GCA 90 bp AGTCCCAACATGCACTTGGCAGTGTTTATGTCTAGGCTGCGCTGGTCCTTTTCCGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 4 (lower is better)
Translates to: SPNMHLAVFMSRLRWSFSAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...GGAAAAGGACCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000512199.5
CDS-3UTR GCA 90 bp GCTGGTCCTTTTCTCCTGCTCTGCAAGGGTGCCAGCCAGCAGCTCGCAATCACTCTCTCACTTATAGTATaGTTGTTTTCTCAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: AGPFLLLCKGASQQLAITLSLIV*LFSQKA
Trigger: AGCCTTTTGAGAAAACAAGCATACTATAAGTGAGAG...AGTGATTGCGAGCTGCTGGCTGGCACCCTTGCAGAGCAGGAGAAAAGGACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR GCA 90 bp AGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAAGGCAGTTTGCCTGCAATGGACATaGTGCCAGGAAAAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: RVSTLPLSSQRGLFFKAVCLQWT*CQEKPS
Trigger: GCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCA...AACTGCCTTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp ATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCTTCTTGTCCACTGCCTaGAATGGACATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: MGDKTVVTVTLSLLCIKSFLSTA*NGHAAR
Trigger: CCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAA...GGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR GCA 90 bp ATAAAATCAAGACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTCCGACATCATACCATTaGACTCCAGCCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: IKSRQSRVSTLPLSSQRGPTSYH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAATGGTATGATGTCGG...ACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGTCTTGATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR GCA 90 bp AGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTGACAAACCTGCTCTGCAAGGGTaGCAGCCAGCAGCTCGCAAT +
Preference number: 4 (lower is better)
Translates to: RSSMRFDTNSNLWLMGDKPALQG*QPAARN
Trigger: ATTGCGAGCTGCTGGCTGGCACCCTTGCAGAGCAGG...TTTGTCACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000505634.5
CDS-3UTR GCA 90 bp GTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACTGTTTATGTCTAGGCTaGGCTGGTCCTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VPAKGKQCKRSSMRFDTNCLCLG*AGPFLE
Trigger: CTCCAGAAAAGGACCAGCGCAGCCTAGACATAAACA...GTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510808.1
CDS-3UTR CCA 90 bp AACAATGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGCACCACTCAGCCCTTTaGAAATCCTCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: NNATQQAELANSIANTNMHHSAL*KSSPLC
Trigger: GCACAAGGGTGAGGATTTCCAAAGGGCTGAGTGGTG...CATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451288.6
CDS-3UTR CCA 90 bp AACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATAACACAGCGTACAATGTaGCCTCCAGTTGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: NMSLRKGNSAREAACALITQRTM*PPVDPS
Trigger: TGACGGATCAACTGGAGGCCACATTGTACGCTGTGT...TATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR CCA 90 bp GGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGATGTCTAGGCTGCGCTaGTCCTTTTCTGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GQFNSKHQHVPAKGKQCKMSRLR*SFSGEK
Trigger: CTTCTCTCCAGAAAAGGACCAGCGCAGCCTAGACAT...CTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510808.1
CDS-3UTR TCA 90 bp CACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTAATATTTGCCAGTGTTaGGAGATGAGAGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HQHVPAKGKQCKRSSMRFNICQC*EMRVQL
Trigger: CAGCTGAACTCTCATCTCTCAACACTGGCAAATATT...AAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR TCA 90 bp CTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGACTTCCTGTTTGGTaGTCGTCTTGGCCAATGTCT +
Preference number: 4 (lower is better)
Translates to: LANSIANTNMSLRKGNSARLPVW*SSWPMS
Trigger: AGACATTGGCCAAGACGATCACCAAACAGGAAGTCT...TGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR TCA 90 bp GCAGACTTCCTGTTTGGTGATCGTCTTGGCCAATGTCTTCTGTTAGGTTCAGCTAGACTTCCTGTTTGGTaGTCGTCTTGGCCAATGTCT +
Preference number: 4 (lower is better)
Translates to: ADFLFGDRLGQCLLLGSARLPVW*SSWPMS
Trigger: AGACATTGGCCAAGACGATCACCAAACAGGAAGTCT...AGCTGAACCTAACAGAAGACATTGGCCAAGACGATCACCAAACAGGAAGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
CDS-3UTR TCA 90 bp GTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACGCCTCTAAAAAGTTATaGCTCCTACCTCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VPAKGKQCKRSSMRFDTNASKKL*LLPPSR
Trigger: TCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGC...GTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000509376.5
CDS-3UTR TCA 90 bp AAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATAGCTACTCAGGAGGCTaGGGCAGGGGAAATCGCTTC +
Preference number: 4 (lower is better)
Translates to: KGNSAREAACALIQTAIYSYSGG*GRGNRF
Trigger: GAAGCGATTTCCCCTGCCTCAGCCTCCTGAGTAGCT...ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR GCA 90 bp ACAAACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCGCGGCGGCATCCGAGTaGATTTTCAGGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: TNSNLWLMGDKTVVTVTLAAASE*IFRQLT
Trigger: TGTGAGCTGCCTGAAAATGCACTCGGATGCCGCCGC...GAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp TTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: FNSKHQHVPAKGKQCKRSSSLKN*KTADFL
Trigger: CAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...GCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR GCA 90 bp GCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCCACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 4 (lower is better)
Translates to: ANTNMSLRKGNSAREAACHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...GCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp TTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCTGTTTATGTCTAGGCTaGGCTGGTCCTTTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: FNSKHQHVPAKGKQCKRSCLCLG*AGPFPV
Trigger: CACGGGAAAAGGACCAGCGCAGCCTAGACATAAACA...GCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000507741.5
CDS-3UTR GCA 90 bp GCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 4 (lower is better)
Translates to: AELANSIANTNMSLRKGNAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...GTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR GCA 90 bp CAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 4 (lower is better)
Translates to: QAELANSIANTNMSLRKGAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...TCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR GCA 90 bp CAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 4 (lower is better)
Translates to: QHVPAKGKQCKRSSMRFDAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...ATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR GCA 90 bp GCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGCAACTAGAAGTGCGATaGAGTTATAAACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ASRAGQFNSKHQHVPAKGQLEVR*SYKQPA
Trigger: TGCTGGCTGTTTATAACTGCATCGCACTTCTAGTTG...CCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCCCGACATCATACCATTaGACTCCAGCCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPPTSYH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAATGGTATGATGTCGG...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000509068.5
ENST00000509376.5
CDS-3UTR GCA 90 bp AAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTACCTTTTCTCCTGCTCTaGAAGGGTGCCAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KQCKRSSMRFDTNSNLWLPFLLL*KGASQQ
Trigger: CTGCTGGCTGGCACCCTTGCAGAGCAGGAGAAAAGG...TAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000505634.5
CDS-3UTR GCA 90 bp TTCTTGGCAGATAAATCATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: FLADKSSPEAGLLFFLGGSSLKN*KTADFQ
Trigger: CTGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...GCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTTATCTGCCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502930.5
ENST00000509376.5
CDS-3UTR CCA 90 bp TCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACATTAGCTCAATGCTGGTaGTTTCTTGTCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLRKGNSAREAACALIQTLAQCW*FLVHCL
Trigger: CAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAA...TGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp CAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGAAGCAACCCACGTTTTaGTCTCATTTACAGACACCC +
Preference number: 4 (lower is better)
Translates to: QQAELANSIANTNMSLRKKQPTF*SHLQTP
Trigger: GGGTGTCTGTAAATGAGACCAAAACGTGGGTTGCTT...CTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp CATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACACATTGTAGGCACATGTaGCCACACCATTTTGTAAGC +
Preference number: 4 (lower is better)
Translates to: HVPAKGKQCKRSSMRFDTHCRHM*PHHFVS
Trigger: GCTTACAAAATGGTGTGGCCACATGTGCCTACAATG...TGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR CCA 90 bp TTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCACACAGCGTACAATGTaGCCTCCAGTTGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: LWLMGDKTVVTVTLSLLCTQRTM*PPVDPS
Trigger: TGACGGATCAACTGGAGGCCACATTGTACGCTGTGT...GCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR TCA 90 bp GCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAATATTTGCCAGTGTTaGGAGATGAGAGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AELANSIANTNMSLRKGNNICQC*EMRVQL
Trigger: CAGCTGAACTCTCATCTCTCAACACTGGCAAATATT...GTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR TCA 90 bp AATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCAATCACGGATCTTGCTaGCCACGACAGCATTTACTT +
Preference number: 4 (lower is better)
Translates to: NSKHQHVPAKGKQCKRSSNHGSC*PRQHLL
Trigger: AAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATT...GCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAGTTACCTGCTGTCATTaGACAGTAACCCCCAATAGA +
Preference number: 4 (lower is better)
Translates to: LRKGNSAREAACALIQTAVTCCH*TVTPNR
Trigger: TCTATTGGGGGTTACTGTTCAATGACAGCAGGTAAC...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp GATCCAAACCTGCCTAGGCCAGTCACCACTGCAAAACAAATGCATCCATCACATGTTACCTGCTGTCATTaGACAGTAACCCCCAATAGA +
Preference number: 4 (lower is better)
Translates to: DPNLPRPVTTAKQMHPSHVTCCH*TVTPNR
Trigger: TCTATTGGGGGTTACTGTTCAATGACAGCAGGTAAC...ATGTGATGGATGCATTTGTTTTGCAGTGGTGACTGGCCTAGGCAGGTTTGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp AATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCGTTACCTGCTGTCATTaGACAGTAACCCCCAATAGA +
Preference number: 4 (lower is better)
Translates to: NSKHQHVPAKGKQCKRSSVTCCH*TVTPNR
Trigger: TCTATTGGGGGTTACTGTTCAATGACAGCAGGTAAC...GCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: SNLWLMGDKTVVTVTLSLSSLKN*KTADFL
Trigger: CAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...CAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR GCA 90 bp GCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT +
Preference number: 4 (lower is better)
Translates to: ASRAGQFNSKHQHVPAKGITVPT*TWQCLC
Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...CCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000510808.1
CDS-3UTR GCA 90 bp TGGCAGTGTTTATGTCTAGGCTGCGCTGGTCCTTTTCCCGTGCAAAGTCAAACGAGTGTAAATACAAACTaGAAAGCAGCCTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: WQCLCLGCAGPFPVQSQTSVNTN*KAAFQE
Trigger: CTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACT...CGTTTGACTTTGCACGGGAAAAGGACCAGCGCAGCCTAGACATAAACACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR GCA 90 bp CAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGACAACTAGAAGTGCGATaGAGTTATAAACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QAELANSIANTNMSLRKGQLEVR*SYKQPA
Trigger: TGCTGGCTGTTTATAACTGCATCGCACTTCTAGTTG...TCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp CACCCGAAAGAAGTTTTAGCCAGAGTTCCAAATAACCCAAACCTTTTTCCAGTCTTCTTGTCCACTGCCTaGAATGGACATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HPKEVLARVPNNPNLFPVFLSTA*NGHAAR
Trigger: CCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAA...GACTGGAAAAAGGTTTGGGTTATTTGGAACTCTGGCTAAAACTTCTTTCGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AAATTTCTCCATGCCTTCAGGGCCTACAACATCATCAGTTCCTGCATATTCATACCGACATCATACCATTaGACTCCAGCCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: KFLHAFRAYNIISSCIFIPTSYH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAATGGTATGATGTCGG...TATGAATATGCAGGAACTGATGATGTTGTAGGCCCTGAAGGCATGGAGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509376.5
CDS-3UTR GCA 90 bp AAATTTCTCCATGCCTTCAGGGCCTACAACATCATCAGTTCCTGCATATTCATACAGGGGCCGCCCTGCTaGGTCTCTCATTTGACAAAA +
Preference number: 4 (lower is better)
Translates to: KFLHAFRAYNIISSCIFIQGPPC*VSHLTK
Trigger: TTTTGTCAAATGAGAGACGCAGCAGGGCGGCCCCTG...TATGAATATGCAGGAACTGATGATGTTGTAGGCCCTGAAGGCATGGAGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509376.5
CDS-3UTR CCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTGTCCACTGCCTGCAATaGACATGCTGCCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGVHCLQ*TCCQEK
Trigger: CTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGAC...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCTTAGCTCAATGCTGGTaGTTTCTTGTCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: LWLMGDKTVVTVTLSLLCLAQCW*FLVHCL
Trigger: CAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAA...GCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp AACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTAGCTCAATGCTGGTaGTTTCTTGTCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: NCGNSDSLAAMHKVLGHLLAQCW*FLVHCL
Trigger: CAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAA...CAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR CCA 90 bp CAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAGGGTTAGCTCAATGCTaGTGGTTTCTTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: QFNSKHQHVPAKGKQCKRGLAQC*WFLVHC
Trigger: GCAGTGGACAAGAAACCACCAGCATTGAGCTAACCC...TCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ATAAAATCAAGACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTGGGTTAGCTCAATGCTaGTGGTTTCTTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: IKSRQSRVSTLPLSSQRGGLAQC*WFLVHC
Trigger: GCAGTGGACAAGAAACCACCAGCATTGAGCTAACCC...ACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGTCTTGATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp GGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAAGCAACCCACGTTTTaGTCTCATTTACAGACACCC +
Preference number: 4 (lower is better)
Translates to: GQFNSKHQHVPAKGKQCKKQPTF*SHLQTP
Trigger: GGGTGTCTGTAAATGAGACCAAAACGTGGGTTGCTT...CTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ACAGTGAGGACGTTGGCAAATTCACCAATCTGTAGTGTAAATACAAACTGCAAATCTCGCCTTCTCCATTaGCTAAACCGCGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TVRTLANSPICSVNTNCKSRLLH*LNRGSG
Trigger: CCCTGAGCCGCGGTTTAGCCAATGGAGAAGGCGAGA...TTTGCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAACGTCCTCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381441.7
ENST00000509376.5
CDS-3UTR CCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCCACCACTCAGCCCTTTaGAAATCCTCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPHHSAL*KSSPLC
Trigger: GCACAAGGGTGAGGATTTCCAAAGGGCTGAGTGGTG...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509068.5
CDS-3UTR CCA 90 bp CTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAGCGCTGGTCCTTTTCTaGAGAGAAGTCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LANSIANTNMSLRKGNSAALVLF*REVIPF
Trigger: AAAAGGAATGACTTCTCTCCAGAAAAGGACCAGCGC...TGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510808.1
3UTR CAA 72 bp GGCCAGATTTTTCCTAATAACAGTCCCAACATGCACTaGGCAGTGTTTATGTCTAGGCTGCGCTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GQIFPNNSPNMH*AVFMSRLRWSF
Trigger: AAAGGACCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000507741.5
ENST00000512199.5
CDS-3UTR TCA 90 bp GGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCAGACTTCCTGTTTGGTaGTCGTCTTGGCCAATGTCT +
Preference number: 4 (lower is better)
Translates to: GNSAREAACALIQTAIYGRLPVW*SSWPMS
Trigger: AGACATTGGCCAAGACGATCACCAAACAGGAAGTCT...GCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR TCA 90 bp TTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCGTTACCTGCTGTCATTaGACAGTAACCCCCAATAGA +
Preference number: 4 (lower is better)
Translates to: FNSKHQHVPAKGKQCKRSVTCCH*TVTPNR
Trigger: TCTATTGGGGGTTACTGTTCAATGACAGCAGGTAAC...GCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp TTTTTCCTAATAACAGTCCCAACATGCACTTGGCAGTGTTTATGTCTAGGCTGCAATGTGGCCTCCAGTTaGTCCGTCATTGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: FFLITVPTCTWQCLCLGCNVASS*SVIVGT
Trigger: TGTGCCTACAATGACGGATCAACTGGAGGCCACATT...GCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR GCA 90 bp CATTCCAAGCACCTTTTACTTGAAAAGGCTTCTTCTTCAGTCTTTATTCTAGTCGCGGCGGCATCCGAGTaGATTTTCAGGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: HSKHLLLEKASSSVFILVAAASE*IFRQLT
Trigger: TGTGAGCTGCCTGAAAATGCACTCGGATGCCGCCGC...GACTAGAATAAAGACTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502930.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp AATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: NSIANTNMSLRKGNSARESSLKN*KTADFL
Trigger: CAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...TTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR GCA 90 bp ATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCATCACTTTATTAAAGCAAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: ISRGRSSLFPWWHHFIKASSLKN*KTADFL
Trigger: CAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...TGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
CDS-3UTR GCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPSSLKN*KTADFL
Trigger: CAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509068.5
CDS-3UTR GCA 90 bp GGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGCACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 4 (lower is better)
Translates to: GQFNSKHQHVPAKGKQCKHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...CTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp CAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT +
Preference number: 4 (lower is better)
Translates to: QHVPAKGKQCKRSSMRFDITVPT*TWQCLC
Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...ATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR GCA 90 bp AACAATGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 4 (lower is better)
Translates to: NNATQQAELANSIANTNMAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...CATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR GCA 90 bp CATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAGTGTAAATACAAACTaGAAAGCAGCCTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: HVPAKGKQCKRSSMRFDTSVNTN*KAAFQE
Trigger: CTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACT...TGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR GCA 90 bp GCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGTAAATACAAACTaGAAAGCAGCCTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: AELANSIANTNMSLRKGNSVNTN*KAAFQE
Trigger: CTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACT...GTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR GCA 90 bp AGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTGACAAATGCCTGCAATGGACATaGTGCCAGGAAAAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: RSSMRFDTNSNLWLMGDKCLQWT*CQEKPS
Trigger: GCTAGGCTTTTCCTGGCAGCATGTCCATTGCAGGCA...TTTGTCACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAATGGTTTCTTGTCCACTaGCTGCAATGGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: NSIANTNMSLRKGNSAREWFLVH*LQWTCC
Trigger: GCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCA...TTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp TGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGTAGCACTGTCTGTGTaGTTTATTCACTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: CHTASRAGQFNSKHQHVPVALSV*FIHLMP
Trigger: TGGCATTAAGTGAATAAAGCACACAGACAGTGCTAC...AGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp GCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGATGACAACAGAGTATTaGAATGTGGAGTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: ASRAGQFNSKHQHVPAKGMTTEY*NVEFET
Trigger: TGTTTCGAACTCCACATTGCAATACTCTGTTGTCAT...CCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp TGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTTACCATCTTCGGCCCGTaGAAAGTCAAACGCATATCT +
Preference number: 4 (lower is better)
Translates to: CGNSDSLAAMHKVLGHLFTIFGP*KVKRIS
Trigger: AGATATGCGTTTGACTTTGCACGGGCCGAAGATGGT...AAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000505634.5
CDS-3UTR CCA 90 bp ACAAACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCGTCCACTGCCTGCAATaGACATGCTGCCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: TNSNLWLMGDKTVVTVTLVHCLQ*TCCQEK
Trigger: CTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGAC...GAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp AGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTTGTCTTTATAGTCCACTGCCTGCAATaGACATGCTGCCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SDSLAAMHKVLGHLFVFIVHCLQ*TCCQEK
Trigger: CTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGAC...TATAAAGACAAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR CCA 90 bp GGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTTAGCTCAATGCTGGTaGTTTCTTGTCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: GNSAREAACALIQTAIYGLAQCW*FLVHCL
Trigger: CAGGCAGTGGACAAGAAACCACCAGCATTGAGCTAA...GCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAAGGGTTAGCTCAATGCTaGTGGTTTCTTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TIKGKHSAAQQSKRFIFQGLAQC*WFLVHC
Trigger: GCAGTGGACAAGAAACCACCAGCATTGAGCTAACCC...TTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTGGTCCTAGCATGTACTaGGTTAGCTCAATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGGPSMY*VSSMLV
Trigger: CACCAGCATTGAGCTAACCCAGTACATGCTAGGACC...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp CAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTCCTAGCATGTACTaGGTTAGCTCAATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QCKRSSMRFDTNSNLWLMGPSMY*VSSMLV
Trigger: CACCAGCATTGAGCTAACCCAGTACATGCTAGGACC...CATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TATACATGCTATCATGTCTACTTTTCTTGGCAGATAAATCATCTCCAGAGGCAGCCTGCTTTCGCCATGTaGTGTGCCTGCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: YTCYHVYFSWQINHLQRQPAFAM*CACSPF
Trigger: GAATGGAGAGCAGGCACACCACATGGCGAAAGCAGG...CTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCATGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506673.5
CDS-3UTR TCA 90 bp TTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCAATATTTGCCAGTGTTaGGAGATGAGAGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LWLMGDKTVVTVTLSLLCNICQC*EMRVQL
Trigger: CAGCTGAACTCTCATCTCTCAACACTGGCAAATATT...GCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR TCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCAGACTTCCTGTTTGGTaGTCGTCTTGGCCAATGTCT +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPRLPVW*SSWPMS
Trigger: AGACATTGGCCAAGACGATCACCAAACAGGAAGTCT...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509068.5
CDS-3UTR TCA 90 bp TTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCTTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: LWLMGDKTVVTVTLSLLCFIKAV*RTARPQ
Trigger: CTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAA...GCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR TCA 90 bp TGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTCAGAACTTTAGGGACTaGATTAGTCATTCAATAGCA +
Preference number: 4 (lower is better)
Translates to: CHTASRAGQFNSKHQHVPQNFRD*ISHSIA
Trigger: TGCTATTGAATGACTAATTCAGTCCCTAAAGTTCTG...AGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp ATAAAATCAAGACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTAATCACGGATCTTGCTaGCCACGACAGCATTTACTT +
Preference number: 4 (lower is better)
Translates to: IKSRQSRVSTLPLSSQRGNHGSC*PRQHLL
Trigger: AAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATT...ACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGTCTTGATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp CAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAATCACGGATCTTGCTaGCCACGACAGCATTTACTT +
Preference number: 4 (lower is better)
Translates to: QFNSKHQHVPAKGKQCKRNHGSC*PRQHLL
Trigger: AAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATT...TCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp CAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATAAAGGTTGTATTCCATaGCAACAGAGTATTGCAATG +
Preference number: 4 (lower is better)
Translates to: QHVPAKGKQCKRSSMRFDKGCIP*QQSIAM
Trigger: CATTGCAATACTCTGTTGTCATGGAATACAACCTTT...ATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp CTAAAAAGTTATGACTCCTACCTCCTTCCAGAAGTTGGCCTCTTAAACAGTAAGAATGTGGCCTCCAGTTaGTCCGTCATTGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: LKSYDSYLLPEVGLLNSKNVASS*SVIVGT
Trigger: TGTGCCTACAATGACGGATCAACTGGAGGCCACATT...CTTACTGTTTAAGAGGCCAACTTCTGGAAGGAGGTAGGAGTCATAACTTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR GCA 90 bp AATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCCAACAAAACTGGCCATaGTCCATCTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: NSKHQHVPAKGKQCKRSSQQNWP*SIFIIV
Trigger: AACTATGATGAAGATGGAGCATGGCCAGTTTTGTTG...GCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR GCA 90 bp ACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAACAACAAAACTGGCCATaGTCCATCTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: TASRAGQFNSKHQHVPAKQQNWP*SIFIIV
Trigger: AACTATGATGAAGATGGAGCATGGCCAGTTTTGTTG...TTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR GCA 90 bp AGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGGCAAGAGAAGCAGCATaGGCTTTGATACAAACAGCA +
Preference number: 4 (lower is better)
Translates to: SNLWLMGDKTVVTVTLSLAREAA*ALIQTA
Trigger: TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGC...CAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR GCA 90 bp AACAATGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGCAACTAGAAGTGCGATaGAGTTATAAACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: NNATQQAELANSIANTNMQLEVR*SYKQPA
Trigger: TGCTGGCTGTTTATAACTGCATCGCACTTCTAGTTG...CATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGTTTCTTGTCCACTaGCTGCAATGGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: KGKQCKRSSMRFDTNSNLWFLVH*LQWTCC
Trigger: GCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCA...TAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGACTGGGTTAGCTCAATaGTGGTGGTTTCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: NSNLWLMGDKTVVTVTLSTGLAQ*WWFLVH
Trigger: GTGGACAAGAAACCACCAGCATTGAGCTAACCCAGT...CGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp CAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGACTGGGTTAGCTCAATaGTGGTGGTTTCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: QCKRSSMRFDTNSNLWLMTGLAQ*WWFLVH
Trigger: GTGGACAAGAAACCACCAGCATTGAGCTAACCCAGT...CATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp ACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAAACCTAAAACCAGTTTaGTGTACTCAAGTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: TASRAGQFNSKHQHVPAKNLKPV*CTQVRW
Trigger: CCACCTAACTTGAGTACAGCAAACTGGTTTTAGGTT...TTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp TCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAAACCTAAAACCAGTTTaGTGTACTCAAGTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLRKGNSAREAACALIQTNLKPV*CTQVRW
Trigger: CCACCTAACTTGAGTACAGCAAACTGGTTTTAGGTT...TGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp CAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAACTTTGTATTTTGATTaGCGTGCAAAGTCAAACGCA +
Preference number: 4 (lower is better)
Translates to: QAELANSIANTNMSLRKGTLYFD*RAKSNA
Trigger: TGCGTTTGACTTTGCACGGCAATCAAAATACAAAGT...TCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381441.7
ENST00000509376.5
CDS-3UTR GCA 90 bp AAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAAGCAGTCTGAAGAACTaGAAGACCGCAGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: KQCKRSSMRFDTNSNLWLSSLKN*KTADFQ
Trigger: CTGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT...TAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509376.5
CDS-3UTR CCA 90 bp GCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCTCTGTTGTATCACATTaGAGAGAAGTCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ANTNMSLRKGNSAREAACSVVSH*REVIPF
Trigger: AAAAGGAATGACTTCTCTCCAATGTGATACAACAGA...GCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CCA 90 bp AGGTCAAGATTAATTGTTCTGCTAAACTCTAGGACATTGCACCACTGGTCTTTAATGTCTAGGCTGCGCTaGTCCTTTTCCCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RSRLIVLLNSRTLHHWSLMSRLR*SFSRAK
Trigger: CTTTGCACGGGAAAAGGACCAGCGCAGCCTAGACAT...TAAAGACCAGTGGTGCAATGTCCTAGAGTTTAGCAGAACAATTAATCTTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR CCA 90 bp GCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGAGGACATTGCACCACTaGTCTTTATTAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: ATQQAELANSIANTNMSLRTLHH*SLLITL
Trigger: CAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCT...CAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CCA 90 bp CACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 4 (lower is better)
Translates to: HQHVPAKGKQCKRSSMRFTNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...AAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CCA 90 bp ATCACAGTGAGGACGTTGGCAAATTCACCAATCTGTAGTGTAAATACAAACTGCGGGTTAGCTCAATGCTaGTGGTTTCTTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: ITVRTLANSPICSVNTNCGLAQC*WFLVHC
Trigger: GCAGTGGACAAGAAACCACCAGCATTGAGCTAACCC...GCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ACAAACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCGGTCCTAGCATGTACTaGGTTAGCTCAATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TNSNLWLMGDKTVVTVTLGPSMY*VSSMLV
Trigger: CACCAGCATTGAGCTAACCCAGTACATGCTAGGACC...GAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp AGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGGTATTTCAGTTAAGCTaGGAGTCACAGGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: SNLWLMGDKTVVTVTLSLVFQLS*ESQDLH
Trigger: GTGCAAGTCCTGTGACTCCCAGCTTAACTGAAATAC...CAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ATAAAATCAAGACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTGTATTTCAGTTAAGCTaGGAGTCACAGGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: IKSRQSRVSTLPLSSQRGVFQLS*ESQDLH
Trigger: GTGCAAGTCCTGTGACTCCCAGCTTAACTGAAATAC...ACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGTCTTGATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TTTCCCTACCATCAAAATGTTGATTGTGGATTAACTGTAACATCTCCCTCCTGTATGTCTAGGCTGCGCTaGTCCTTTTCTCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: FPYHQNVDCGLTVTSPSCMSRLR*SFSPAL
Trigger: CAGAGCAGGAGAAAAGGACCAGCGCAGCCTAGACAT...ACAGGAGGGAGATGTTACAGTTAATCCACAATCAACATTTTGATGGTAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR TCA 90 bp TGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTTCAACAAGACTTCCTGTTTGGTaGTCGTCTTGGCCAATGTCT +
Preference number: 4 (lower is better)
Translates to: CASNFQARTSITTFSGSTRLPVW*SSWPMS
Trigger: AGACATTGGCCAAGACGATCACCAAACAGGAAGTCT...TGTTGAACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR TCA 90 bp ATTTGGCATATGCCTCTAAAAAGTTATGACTCCTACCTCCTTCCAGAAGTTGGCGCCTCTAAAAAGTTATaGCTCCTACCTCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: IWHMPLKSYDSYLLPEVGASKKL*LLPPSR
Trigger: TCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGC...GCCAACTTCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGCATATGCCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000509376.5
CDS-3UTR TCA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAAAAGGTTGTATTCCATaGCAACAGAGTATTGCAATG +
Preference number: 4 (lower is better)
Translates to: LRKGNSAREAACALIQTAKGCIP*QQSIAM
Trigger: CATTGCAATACTCTGTTGTCATGGAATACAACCTTT...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp TTTTTCCTAATAACAGTCCCAACATGCACTTGGCAGTGTTTATGTCTAGGCTGCCTGGTCCTTTTCCCGTaGAAAGTCAAACGCATATCT +
Preference number: 4 (lower is better)
Translates to: FFLITVPTCTWQCLCLGCLVLFP*KVKRIS
Trigger: AGATATGCGTTTGACTTTGCACGGGAAAAGGACCAG...GCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR GCA 90 bp AGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAAGGCAGTTATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT +
Preference number: 4 (lower is better)
Translates to: RVSTLPLSSQRGLFFKAVITVPT*TWQCLC
Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...AACTGCCTTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp TCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT +
Preference number: 4 (lower is better)
Translates to: SIANTNMSLRKGNSAREAITVPT*TWQCLC
Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...TGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000510808.1
CDS-3UTR GCA 90 bp TTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT +
Preference number: 4 (lower is better)
Translates to: FNSKHQHVPAKGKQCKRSITVPT*TWQCLC
Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...GCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000510808.1
CDS-3UTR GCA 90 bp CATTCAATAGCACCAGATAGTTGGGGTGAAAACATGTCATCTCTATATTTCCTCTGGTTTCTTGTCCACTaGCTGCAATGGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: HSIAPDSWGENMSSLYFLWFLVH*LQWTCC
Trigger: GCAGCATGTCCATTGCAGGCAGTGGACAAGAAACCA...GAGGAAATATAGAGATGACATGTTTTCACCCCAACTATCTGGTGCTATTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp ATCACAGTGAGGACGTTGGCAAATTCACCAATCTGTAGTGTAAATACAAACTGCACTGGGTTAGCTCAATaGTGGTGGTTTCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ITVRTLANSPICSVNTNCTGLAQ*WWFLVH
Trigger: GTGGACAAGAAACCACCAGCATTGAGCTAACCCAGT...GCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTGACAAAACTGGGTTAGCTCAATaGTGGTGGTTTCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RSSMRFDTNSNLWLMGDKTGLAQ*WWFLVH
Trigger: GTGGACAAGAAACCACCAGCATTGAGCTAACCCAGT...TTTGTCACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp ACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAATGACAACAGAGTATTaGAATGTGGAGTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: TASRAGQFNSKHQHVPAKMTTEY*NVEFET
Trigger: TGTTTCGAACTCCACATTGCAATACTCTGTTGTCAT...TTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTAACCATCTTCGGCCCGTaGAAAGTCAAACGCATATCT +
Preference number: 4 (lower is better)
Translates to: KGKQCKRSSMRFDTNSNLTIFGP*KVKRIS
Trigger: AGATATGCGTTTGACTTTGCACGGGCCGAAGATGGT...TAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000505634.5
CDS-3UTR GCA 90 bp CTACTTTTCTTGGCAGATAAATCATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTCCAGAAACGGACGTGTaGACATTCACAAACACTCCT +
Preference number: 4 (lower is better)
Translates to: LLFLADKSSPEAGLLFFLPETDV*TFTNTP
Trigger: AGGAGTGTTTGTGAATGTGCACACGTCCGTTTCTGG...AAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR CCA 90 bp GCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACTCTGTTGTATCACATTaGAGAGAAGTCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: AELANSIANTNMSLRKGNSVVSH*REVIPF
Trigger: AAAAGGAATGACTTCTCTCCAATGTGATACAACAGA...GTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CCA 90 bp GCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAGGACATTGCACCACTaGTCTTTATTAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: AGQFNSKHQHVPAKGKQCRTLHH*SLLITL
Trigger: CAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCT...GCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CCA 90 bp AACAATGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGATAGCACCAGATAGTTaGGGTGAAAACATGTCATCT +
Preference number: 4 (lower is better)
Translates to: NNATQQAELANSIANTNMIAPDS*GENMSS
Trigger: AGATGACATGTTTTCACCCCAACTATCTGGTGCTAT...CATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp GACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTTGTCTTTATACCACATTGTAGGCACATGTaGCCACACCATTTTGTAAGC +
Preference number: 4 (lower is better)
Translates to: DSLAAMHKVLGHLFVFIPHCRHM*PHHFVS
Trigger: GCTTACAAAATGGTGTGGCCACATGTGCCTACAATG...TGGTATAAAGACAAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR TCA 90 bp ACATGCTATCATGTCTACTTTTCTTGGCAGATAAATCATCTCCAGAGGCAGGTCAATATTTGCCAGTGTTaGGAGATGAGAGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TCYHVYFSWQINHLQRQVNICQC*EMRVQL
Trigger: CAGCTGAACTCTCATCTCTCAACACTGGCAAATATT...GACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502930.5
ENST00000506673.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR TCA 90 bp CAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGTTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: QCKRSSMRFDTNSNLWLMFIKAV*RTARPQ
Trigger: CTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAA...CATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR TCA 90 bp ACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAATTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: TIKGKHSAAQQSKRFIFQFIKAV*RTARPQ
Trigger: CTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAA...TTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCTTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPFIKAV*RTARPQ
Trigger: CTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAA...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000509068.5
ENST00000509376.5
CDS-3UTR TCA 90 bp GACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTTGTCTTTATACCATTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: DSLAAMHKVLGHLFVFIPFIKAV*RTARPQ
Trigger: CTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAA...TGGTATAAAGACAAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR TCA 90 bp AAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTAGCCTCTAAAAAGTTATaGCTCCTACCTCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KGKQCKRSSMRFDTNSNLASKKL*LLPPSR
Trigger: TCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGC...TAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000509376.5
CDS-3UTR TCA 90 bp AAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTAAATCACGGATCTTGCTaGCCACGACAGCATTTACTT +
Preference number: 4 (lower is better)
Translates to: KGKQCKRSSMRFDTNSNLNHGSC*PRQHLL
Trigger: AAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATT...TAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AAAGGGGCCAGATTTTTCCTAATAACAGTCCCAACATGCACTTGGCAGTGTTTACACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 4 (lower is better)
Translates to: KGARFFLITVPTCTWQCLHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...TAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCCCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
CDS-3UTR GCA 90 bp ACATGCTATCATGTCTACTTTTCTTGGCAGATAAATCATCTCCAGAGGCAGGTCCACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 4 (lower is better)
Translates to: TCYHVYFSWQINHLQRQVHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...GACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502930.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCCACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000509068.5
ENST00000509376.5
CDS-3UTR GCA 90 bp CAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCAACAAAACTGGCCATaGTCCATCTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: QNCGNSDSLAAMHKVLGHQQNWP*SIFIIV
Trigger: AACTATGATGAAGATGGAGCATGGCCAGTTTTGTTG...ATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000512199.5
CDS-3UTR GCA 90 bp GGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCAGTGTAAATACAAACTaGAAAGCAGCCTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GNSAREAACALIQTAIYGSVNTN*KAAFQE
Trigger: CTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACT...GCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR GCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTCAACTAGAAGTGCGATaGAGTTATAAACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGQLEVR*SYKQPA
Trigger: TGCTGGCTGTTTATAACTGCATCGCACTTCTAGTTG...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp GATCCAAACCTGCCTAGGCCAGTCACCACTGCAAAACAAATGCATCCATCACATCTCTCACTTATAGTATaGTTGTTTTCTCAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: DPNLPRPVTTAKQMHPSHLSLIV*LFSQKA
Trigger: AGCCTTTTGAGAAAACAAGCATACTATAAGTGAGAG...ATGTGATGGATGCATTTGTTTTGCAGTGGTGACTGGCCTAGGCAGGTTTGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGCTCTCACTTATAGTATaGTTGTTTTCTCAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: RAGQFNSKHQHVPAKGKQLSLIV*LFSQKA
Trigger: AGCCTTTTGAGAAAACAAGCATACTATAAGTGAGAG...CTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp TTAACTGTAACATCTCCCTCCTGTAACAATCCTCTCATTTTAGAATTAACTGTGTTCTTGTCCACTGCCTaGAATGGACATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LTVTSPSCNNPLILELTVFLSTA*NGHAAR
Trigger: CCTGGCAGCATGTCCATTGCAGGCAGTGGACAAGAA...CACAGTTAATTCTAAAATGAGAGGATTGTTACAGGAGGGAGATGTTACAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp AATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCTCTCTTTTTCCTTGGTaGCATCACTTTATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: NSKHQHVPAKGKQCKRSSSLFPW*HHFIKA
Trigger: TGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGA...GCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CCA 90 bp CTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCATCTGTTGTATCACATTaGAGAGAAGTCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LANSIANTNMSLRKGNSASVVSH*REVIPF
Trigger: AAAAGGAATGACTTCTCTCCAATGTGATACAACAGA...TGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CCA 90 bp TTAACTGTAACATCTCCCTCCTGTAACAATCCTCTCATTTTAGAATTAACTGTGATGTCTAGGCTGCGCTaGTCCTTTTCCCGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LTVTSPSCNNPLILELTVMSRLR*SFSRAK
Trigger: CTTTGCACGGGAAAAGGACCAGCGCAGCCTAGACAT...CACAGTTAATTCTAAAATGAGAGGATTGTTACAGGAGGGAGATGTTACAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334635.10
ENST00000451288.6
CDS-3UTR CCA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 4 (lower is better)
Translates to: LRKGNSAREAACALIQTATNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CCA 90 bp TTAACTGTAACATCTCCCTCCTGTAACAATCCTCTCATTTTAGAATTAACTGTGGTCCACTGCCTGCAATaGACATGCTGCCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LTVTSPSCNNPLILELTVVHCLQ*TCCQEK
Trigger: CTTTTCCTGGCAGCATGTCCATTGCAGGCAGTGGAC...CACAGTTAATTCTAAAATGAGAGGATTGTTACAGGAGGGAGATGTTACAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCACATGTAACATTACAGTaGATGTTTGAGGCAAATCAA +
Preference number: 4 (lower is better)
Translates to: LRKGNSAREAACALIQTAHVTLQ*MFEANQ
Trigger: TTGATTTGCCTCAAACATCCACTGTAATGTTACATG...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ACAAACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCGTATTTCAGTTAAGCTaGGAGTCACAGGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: TNSNLWLMGDKTVVTVTLVFQLS*ESQDLH
Trigger: GTGCAAGTCCTGTGACTCCCAGCTTAACTGAAATAC...GAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACATGTACTCAAGTTAGGTaGCATAACAGTATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SLRKGNSAREAACALIQTCTQVR*HNSISV
Trigger: AACTGAAATACTGTTATGCCACCTAACTTGAGTACA...TGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
3UTR CAA 72 bp CCTTTTTCCAGTCATCACATGTTCAAATCACGGATCTaGCTGACCACGACAGCATTTACTTGTTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: PFSSHHMFKSRI*LTTTAFTCSNA
Trigger: TGCATTTGAACAAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAACATGTGATGACTGGAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp ATCACAGTGAGGACGTTGGCAAATTCACCAATCTGTAGTGTAAATACAAACTGCAATATTTGCCAGTGTTaGGAGATGAGAGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ITVRTLANSPICSVNTNCNICQC*EMRVQL
Trigger: CAGCTGAACTCTCATCTCTCAACACTGGCAAATATT...GCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR TCA 90 bp CTACTTTTCTTGGCAGATAAATCATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTTTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: LLFLADKSSPEAGLLFFLFIKAV*RTARPQ
Trigger: CTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAA...AAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000502930.5
ENST00000506673.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR TCA 90 bp GGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCCAGAACTTTAGGGACTaGATTAGTCATTCAATAGCA +
Preference number: 4 (lower is better)
Translates to: GNSAREAACALIQTAIYGQNFRD*ISHSIA
Trigger: TGCTATTGAATGACTAATTCAGTCCCTAAAGTTCTG...GCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTACACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 4 (lower is better)
Translates to: KQCKRSSMRFDTNSNLWLHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...TAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTCAACAAAACTGGCCATaGTCCATCTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGQQNWP*SIFIIV
Trigger: AACTATGATGAAGATGGAGCATGGCCAGTTTTGTTG...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR GCA 90 bp ATTTGGCATATGCCTCTAAAAAGTTATGACTCCTACCTCCTTCCAGAAGTTGGCGTAGCACTGTCTGTGTaGTTTATTCACTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: IWHMPLKSYDSYLLPEVGVALSV*FIHLMP
Trigger: TGGCATTAAGTGAATAAAGCACACAGACAGTGCTAC...GCCAACTTCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGCATATGCCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp CAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGTAGCACTGTCTGTGTaGTTTATTCACTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: QCKRSSMRFDTNSNLWLMVALSV*FIHLMP
Trigger: TGGCATTAAGTGAATAAAGCACACAGACAGTGCTAC...CATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAAACCTAAAACCAGTTTaGTGTACTCAAGTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: NSIANTNMSLRKGNSARENLKPV*CTQVRW
Trigger: CCACCTAACTTGAGTACAGCAAACTGGTTTTAGGTT...TTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAAGGACATTGCACCACTaGTCTTTATTAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: SIANTNMSLRKGNSAREARTLHH*SLLITL
Trigger: CAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCT...TGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CCA 90 bp TTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGGACATTGCACCACTaGTCTTTATTAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: FNSKHQHVPAKGKQCKRSRTLHH*SLLITL
Trigger: CAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCT...GCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CCA 90 bp ATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCAGGACATTGCACCACTaGTCTTTATTAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: MGDKTVVTVTLSLLCIKSRTLHH*SLLITL
Trigger: CAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCT...GGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000512199.5
CDS-3UTR CCA 90 bp TCTTGGCAGATAAATCATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCAACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 4 (lower is better)
Translates to: SWQINHLQRQVFSFSLVATNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...TGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTTATCTGCCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CCA 90 bp TTAACTGTAACATCTCCCTCCTGTAACAATCCTCTCATTTTAGAATTAACTGTGGGTCCTAGCATGTACTaGGTTAGCTCAATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LTVTSPSCNNPLILELTVGPSMY*VSSMLV
Trigger: CACCAGCATTGAGCTAACCCAGTACATGCTAGGACC...CACAGTTAATTCTAAAATGAGAGGATTGTTACAGGAGGGAGATGTTACAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAAATAGCACCAGATAGTTaGGGTGAAAACATGTCATCT +
Preference number: 4 (lower is better)
Translates to: TIKGKHSAAQQSKRFIFQIAPDS*GENMSS
Trigger: AGATGACATGTTTTCACCCCAACTATCTGGTGCTAT...TTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ATAAAATCAAGACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTCAGAGTATTGCAATGTaGAGTTCGAAACACAATAGA +
Preference number: 4 (lower is better)
Translates to: IKSRQSRVSTLPLSSQRGQSIAM*SSKHNR
Trigger: TCTATTGTGTTTCGAACTCCACATTGCAATACTCTG...ACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGTCTTGATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ACAGTGAGGACGTTGGCAAATTCACCAATCTGTAGTGTAAATACAAACTGCAAAGTATTTCAGTTAAGCTaGGAGTCACAGGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: TVRTLANSPICSVNTNCKVFQLS*ESQDLH
Trigger: GTGCAAGTCCTGTGACTCCCAGCTTAACTGAAATAC...TTTGCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAACGTCCTCACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCATGTACTCAAGTTAGGTaGCATAACAGTATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SIANTNMSLRKGNSAREACTQVR*HNSISV
Trigger: AACTGAAATACTGTTATGCCACCTAACTTGAGTACA...TGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCTGTACTCAAGTTAGGTaGCATAACAGTATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LWLMGDKTVVTVTLSLLCCTQVR*HNSISV
Trigger: AACTGAAATACTGTTATGCCACCTAACTTGAGTACA...GCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCCATTTTGTAAGCATCTaGCTTACTGTACCTTTTACA +
Preference number: 4 (lower is better)
Translates to: LWLMGDKTVVTVTLSLLCHFVSI*LTVPFT
Trigger: TGTAAAAGGTACAGTAAGCCAGATGCTTACAAAATG...GCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR CCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCAGACTCCATGTTTTCTaGTTCAACACCAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTCSPRLHVF*FNTNVF
Trigger: GAAGACATTGGTGTTGAACCAGAAAACATGGAGTCT...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509068.5
CDS-3UTR TCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTCAGAACTTTAGGGACTaGATTAGTCATTCAATAGCA +
Preference number: 4 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGQNFRD*ISHSIA
Trigger: TGCTATTGAATGACTAATTCAGTCCCTAAAGTTCTG...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp TTTCCCTACCATCAAAATGTTGATTGTGGATTAACTGTAACATCTCCCTCCTGTCACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 4 (lower is better)
Translates to: FPYHQNVDCGLTVTSPSCHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...ACAGGAGGGAGATGTTACAGTTAATCCACAATCAACATTTTGATGGTAGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AGGTCAAGATTAATTGTTCTGCTAAACTCTAGGACATTGCACCACTGGTCTTTACACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 4 (lower is better)
Translates to: RSRLIVLLNSRTLHHWSLHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...TAAAGACCAGTGGTGCAATGTCCTAGAGTTTAGCAGAACAATTAATCTTGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp AGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTGACAAAATAACAGTCCCAACATaGACTTGGCAGTGTTTATGT +
Preference number: 4 (lower is better)
Translates to: RSSMRFDTNSNLWLMGDKITVPT*TWQCLC
Trigger: ACATAAACACTGCCAAGTGCATGTTGGGACTGTTAT...TTTGTCACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR GCA 90 bp AAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTACAACAAAACTGGCCATaGTCCATCTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: KGKQCKRSSMRFDTNSNLQQNWP*SIFIIV
Trigger: AACTATGATGAAGATGGAGCATGGCCAGTTTTGTTG...TAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR GCA 90 bp ACAAACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCCAACAAAACTGGCCATaGTCCATCTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: TNSNLWLMGDKTVVTVTLQQNWP*SIFIIV
Trigger: AACTATGATGAAGATGGAGCATGGCCAGTTTTGTTG...GAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR GCA 90 bp ACAAACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCAGTGTAAATACAAACTaGAAAGCAGCCTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TNSNLWLMGDKTVVTVTLSVNTN*KAAFQE
Trigger: CTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACT...GAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR GCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTACTTTGTATTTTGATTaGCGTGCAAAGTCAAACGCA +
Preference number: 4 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGTLYFD*RAKSNA
Trigger: TGCGTTTGACTTTGCACGGCAATCAAAATACAAAGT...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381441.7
ENST00000509376.5
CDS-3UTR CCA 90 bp GGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTCTCTTTTTCCTTGGTaGCATCACTTTATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: GNSAREAACALIQTAIYGSLFPW*HHFIKA
Trigger: TGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGA...GCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CCA 90 bp ATGTTCAAATCACGGATCTTGCTGACCACGACAGCATTTACTTGTTCAAATGCAATAGCACCAGATAGTTaGGGTGAAAACATGTCATCT +
Preference number: 4 (lower is better)
Translates to: MFKSRILLTTTAFTCSNAIAPDS*GENMSS
Trigger: AGATGACATGTTTTCACCCCAACTATCTGGTGCTAT...TGCATTTGAACAAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTCAGAGTATTGCAATGTaGAGTTCGAAACACAATAGA +
Preference number: 4 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGQSIAM*SSKHNR
Trigger: TCTATTGTGTTTCGAACTCCACATTGCAATACTCTG...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp GGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCCATGTAACATTACAGTaGATGTTTGAGGCAAATCAA +
Preference number: 4 (lower is better)
Translates to: GNSAREAACALIQTAIYGHVTLQ*MFEANQ
Trigger: TTGATTTGCCTCAAACATCCACTGTAATGTTACATG...GCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp AGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGTGTACTCAAGTTAGGTaGCATAACAGTATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SNLWLMGDKTVVTVTLSLCTQVR*HNSISV
Trigger: AACTGAAATACTGTTATGCCACCTAACTTGAGTACA...CAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp CATATTCATAGAACCATTCCAAGCACCTTTTACTTGAAAAGGCTTCTTCTTCAGTTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: HIHRTIPSTFYLKRLLLQFIKAV*RTARPQ
Trigger: CTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAA...CTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATGGTTCTATGAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502930.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR TCA 90 bp AAAGGCTGGAAAATTACATACCATGAAAGCTTAACTGAAAATTCAAGCCACAACGCCTCTAAAAAGTTATaGCTCCTACCTCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KGWKITYHESLTENSSHNASKKL*LLPPSR
Trigger: TCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGC...GTTGTGGCTTGAATTTTCAGTTAAGCTTTCATGGTATGTAATTTTCCAGCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp TTAACTGTAACATCTCCCTCCTGTAACAATCCTCTCATTTTAGAATTAACTGTGGCCTCTAAAAAGTTATaGCTCCTACCTCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LTVTSPSCNNPLILELTVASKKL*LLPPSR
Trigger: TCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGC...CACAGTTAATTCTAAAATGAGAGGATTGTTACAGGAGGGAGATGTTACAGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp AAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTACAGAACTTTAGGGACTaGATTAGTCATTCAATAGCA +
Preference number: 4 (lower is better)
Translates to: KQCKRSSMRFDTNSNLWLQNFRD*ISHSIA
Trigger: TGCTATTGAATGACTAATTCAGTCCCTAAAGTTCTG...TAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp TTCTATACATGCTATCATGTCTACTTTTCTTGGCAGATAAATCATCTCCAGAGGCACAAAATTTCTCCATaGCTTCAGGGCCTACAACAT +
Preference number: 4 (lower is better)
Translates to: FYTCYHVYFSWQINHLQRHKISP*LQGLQH
Trigger: ATGTTGTAGGCCCTGAAGGCATGGAGAAATTTTGTG...CCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCATGTATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502930.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp TTAACTGTAACATCTCCCTCCTGTAACAATCCTCTCATTTTAGAATTAACTGTGCTGGTCCTTTTCCCGTaGAAAGTCAAACGCATATCT +
Preference number: 4 (lower is better)
Translates to: LTVTSPSCNNPLILELTVLVLFP*KVKRIS
Trigger: AGATATGCGTTTGACTTTGCACGGGAAAAGGACCAG...CACAGTTAATTCTAAAATGAGAGGATTGTTACAGGAGGGAGATGTTACAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334635.10
ENST00000451288.6
CDS-3UTR GCA 90 bp TTTCCCTACCATCAAAATGTTGATTGTGGATTAACTGTAACATCTCCCTCCTGTCAACAAAACTGGCCATaGTCCATCTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: FPYHQNVDCGLTVTSPSCQQNWP*SIFIIV
Trigger: AACTATGATGAAGATGGAGCATGGCCAGTTTTGTTG...ACAGGAGGGAGATGTTACAGTTAATCCACAATCAACATTTTGATGGTAGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AGGTCAAGATTAATTGTTCTGCTAAACTCTAGGACATTGCACCACTGGTCTTTAAGTGTAAATACAAACTaGAAAGCAGCCTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RSRLIVLLNSRTLHHWSLSVNTN*KAAFQE
Trigger: CTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACT...TAAAGACCAGTGGTGCAATGTCCTAGAGTTTAGCAGAACAATTAATCTTGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp AGATTTTTCCTAATAACAGTCCCAACATGCACTTGGCAGTGTTTATGTCTAGGCATGACAACAGAGTATTaGAATGTGGAGTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: RFFLITVPTCTWQCLCLGMTTEY*NVEFET
Trigger: TGTTTCGAACTCCACATTGCAATACTCTGTTGTCAT...GCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR GCA 90 bp AAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATCATCATATAGAACCGTaGAAAGTCAAACGCATATCT +
Preference number: 4 (lower is better)
Translates to: KGNSAREAACALIQTAIYHHIEP*KVKRIS
Trigger: AGATATGCGTTTGACTTTGCACGGTTCTATATGATG...ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512199.5
CDS-3UTR CCA 90 bp AACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGTCTGTTGTATCACATTaGAGAGAAGTCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: NSNLWLMGDKTVVTVTLSSVVSH*REVIPF
Trigger: AAAAGGAATGACTTCTCTCCAATGTGATACAACAGA...CGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CCA 90 bp AATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAATCTGTTGTATCACATTaGAGAGAAGTCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: NSIANTNMSLRKGNSARESVVSH*REVIPF
Trigger: AAAAGGAATGACTTCTCTCCAATGTGATACAACAGA...TTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CCA 90 bp AAAGGGGCCAGATTTTTCCTAATAACAGTCCCAACATGCACTTGGCAGTGTTTAAGGACATTGCACCACTaGTCTTTATTAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: KGARFFLITVPTCTWQCLRTLHH*SLLITL
Trigger: CAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCT...TAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCCCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000512199.5
CDS-3UTR CCA 90 bp CAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGAGGACATTGCACCACTaGTCTTTATTAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: QCKRSSMRFDTNSNLWLMRTLHH*SLLITL
Trigger: CAAAGTTATTAATAAAGACCAGTGGTGCAATGTCCT...CATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CCA 90 bp CAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 4 (lower is better)
Translates to: QCKRSSMRFDTNSNLWLMTNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...CATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CCA 90 bp AATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 4 (lower is better)
Translates to: NSIANTNMSLRKGNSARETNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...TTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CCA 90 bp AACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 4 (lower is better)
Translates to: NSNLWLMGDKTVVTVTLSTNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...CGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CCA 90 bp AAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTACAGAGTATTGCAATGTaGAGTTCGAAACACAATAGA +
Preference number: 4 (lower is better)
Translates to: KQCKRSSMRFDTNSNLWLQSIAM*SSKHNR
Trigger: TCTATTGTGTTTCGAACTCCACATTGCAATACTCTG...TAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTCATGTAACATTACAGTaGATGTTTGAGGCAAATCAA +
Preference number: 4 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGHVTLQ*MFEANQ
Trigger: TTGATTTGCCTCAAACATCCACTGTAATGTTACATG...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp AAAGGCTGGAAAATTACATACCATGAAAGCTTAACTGAAAATTCAAGCCACAACAAGCAACCCACGTTTTaGTCTCATTTACAGACACCC +
Preference number: 4 (lower is better)
Translates to: KGWKITYHESLTENSSHNKQPTF*SHLQTP
Trigger: GGGTGTCTGTAAATGAGACCAAAACGTGGGTTGCTT...GTTGTGGCTTGAATTTTCAGTTAAGCTTTCATGGTATGTAATTTTCCAGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp AAAAATAATGGCTATTGCCCTTCTGTACAAATAACTCAGGTAATGAAAAGTGGCAAGCAACCCACGTTTTaGTCTCATTTACAGACACCC +
Preference number: 4 (lower is better)
Translates to: KNNGYCPSVQITQVMKSGKQPTF*SHLQTP
Trigger: GGGTGTCTGTAAATGAGACCAAAACGTGGGTTGCTT...GCCACTTTTCATTACCTGAGTTATTTGTACAGAAGGGCAATAGCCATTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp AAAAATAATGGCTATTGCCCTTCTGTACAAATAACTCAGGTAATGAAAAGTGGCTTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: KNNGYCPSVQITQVMKSGFIKAV*RTARPQ
Trigger: CTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAA...GCCACTTTTCATTACCTGAGTTATTTGTACAGAAGGGCAATAGCCATTATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp TTAACTGTAACATCTCCCTCCTGTAACAATCCTCTCATTTTAGAATTAACTGTGTTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: LTVTSPSCNNPLILELTVFIKAV*RTARPQ
Trigger: CTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAA...CACAGTTAATTCTAAAATGAGAGGATTGTTACAGGAGGGAGATGTTACAGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp TTTCCCTACCATCAAAATGTTGATTGTGGATTAACTGTAACATCTCCCTCCTGTAAAGGTTGTATTCCATaGCAACAGAGTATTGCAATG +
Preference number: 4 (lower is better)
Translates to: FPYHQNVDCGLTVTSPSCKGCIP*QQSIAM
Trigger: CATTGCAATACTCTGTTGTCATGGAATACAACCTTT...ACAGGAGGGAGATGTTACAGTTAATCCACAATCAACATTTTGATGGTAGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR TCA 90 bp CATTCAATAGCACCAGATAGTTGGGGTGAAAACATGTCATCTCTATATTTCCTCAAAGGTTGTATTCCATaGCAACAGAGTATTGCAATG +
Preference number: 4 (lower is better)
Translates to: HSIAPDSWGENMSSLYFLKGCIP*QQSIAM
Trigger: CATTGCAATACTCTGTTGTCATGGAATACAACCTTT...GAGGAAATATAGAGATGACATGTTTTCACCCCAACTATCTGGTGCTATTGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp CATTCCAAGCACCTTTTACTTGAAAAGGCTTCTTCTTCAGTCTTTATTCTAGTCCAACAAAACTGGCCATaGTCCATCTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: HSKHLLLEKASSSVFILVQQNWP*SIFIIV
Trigger: AACTATGATGAAGATGGAGCATGGCCAGTTTTGTTG...GACTAGAATAAAGACTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000509376.5
CDS-3UTR GCA 90 bp CATATTCATAGAACCATTCCAAGCACCTTTTACTTGAAAAGGCTTCTTCTTCAGCAACAAAACTGGCCATaGTCCATCTTCATCATAGTT +
Preference number: 4 (lower is better)
Translates to: HIHRTIPSTFYLKRLLLQQQNWP*SIFIIV
Trigger: AACTATGATGAAGATGGAGCATGGCCAGTTTTGTTG...CTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATGGTTCTATGAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CCA 90 bp ATGTTCAAATCACGGATCTTGCTGACCACGACAGCATTTACTTGTTCAAATGCATCTCTTTTTCCTTGGTaGCATCACTTTATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: MFKSRILLTTTAFTCSNASLFPW*HHFIKA
Trigger: TGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGA...TGCATTTGAACAAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp CTAAAAAGTTATGACTCCTACCTCCTTCCAGAAGTTGGCCTCTTAAACAGTAAGTCTGTTGTATCACATTaGAGAGAAGTCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LKSYDSYLLPEVGLLNSKSVVSH*REVIPF
Trigger: AAAAGGAATGACTTCTCTCCAATGTGATACAACAGA...CTTACTGTTTAAGAGGCCAACTTCTGGAAGGAGGTAGGAGTCATAACTTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000509376.5
CDS-3UTR CCA 90 bp AAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATTCTGTTGTATCACATTaGAGAGAAGTCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: KGNSAREAACALIQTAIYSVVSH*REVIPF
Trigger: AAAAGGAATGACTTCTCTCCAATGTGATACAACAGA...ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CCA 90 bp AAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTAACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 4 (lower is better)
Translates to: KGKQCKRSSMRFDTNSNLTNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...TAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CCA 90 bp CTAAAAAGTTATGACTCCTACCTCCTTCCAGAAGTTGGCCTCTTAAACAGTAAGCATTTTGTAAGCATCTaGCTTACTGTACCTTTTACA +
Preference number: 4 (lower is better)
Translates to: LKSYDSYLLPEVGLLNSKHFVSI*LTVPFT
Trigger: TGTAAAAGGTACAGTAAGCCAGATGCTTACAAAATG...CTTACTGTTTAAGAGGCCAACTTCTGGAAGGAGGTAGGAGTCATAACTTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR GCA 90 bp AAAAATAATGGCTATTGCCCTTCTGTACAAATAACTCAGGTAATGAAAAGTGGCAGTGTAAATACAAACTaGAAAGCAGCCTTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KNNGYCPSVQITQVMKSGSVNTN*KAAFQE
Trigger: CTCTTGGAAGGCTGCTTTGCAGTTTGTATTTACACT...GCCACTTTTCATTACCTGAGTTATTTGTACAGAAGGGCAATAGCCATTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp AAAAATAATGGCTATTGCCCTTCTGTACAAATAACTCAGGTAATGAAAAGTGGCAACCTAAAACCAGTTTaGTGTACTCAAGTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: KNNGYCPSVQITQVMKSGNLKPV*CTQVRW
Trigger: CCACCTAACTTGAGTACAGCAAACTGGTTTTAGGTT...GCCACTTTTCATTACCTGAGTTATTTGTACAGAAGGGCAATAGCCATTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTTCTCTTTTTCCTTGGTaGCATCACTTTATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: MFCASNFQARTSITTFSGSLFPW*HHFIKA
Trigger: TGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGA...ACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502930.5
ENST00000507741.5
CDS-3UTR CCA 90 bp ATTTCAGTTAAGCTGGGAGTCACAGGACTTGCACACTTTTATGAATGTAATGCACATGTAACATTACAGTaGATGTTTGAGGCAAATCAA +
Preference number: 4 (lower is better)
Translates to: ISVKLGVTGLAHFYECNAHVTLQ*MFEANQ
Trigger: TTGATTTGCCTCAAACATCCACTGTAATGTTACATG...TGCATTACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCAGCTTAACTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR GCA 90 bp TTAACTGTAACATCTCCCTCCTGTAACAATCCTCTCATTTTAGAATTAACTGTGATGACAACAGAGTATTaGAATGTGGAGTTCGAAACA +
Preference number: 4 (lower is better)
Translates to: LTVTSPSCNNPLILELTVMTTEY*NVEFET
Trigger: TGTTTCGAACTCCACATTGCAATACTCTGTTGTCAT...CACAGTTAATTCTAAAATGAGAGGATTGTTACAGGAGGGAGATGTTACAGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp ATTCATAGAACCATTCCAAGCACCTTTTACTTGAAAAGGCTTCTTCTTCAGTCTACAAACAGCAATTTATaGCTAATGGGTGACAAAACT +
Preference number: 4 (lower is better)
Translates to: IHRTIPSTFYLKRLLLQSTNSNL*LMGDKT
Trigger: AGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT...AGACTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATGGTTCTATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000509376.5
3UTR CAA 72 bp AAATGCATCCATCACATCAGTATTAATAGCTGTTGCTaGCCATTAACATTTCCTGTTCTTTTCAGATATTGG +
Preference number: 4 (lower is better)
Translates to: KCIHHISINSCC*PLTFPVLFRYW
Trigger: CCAATATCTGAAAAGAACAGGAAATGTTAATGGCAAGCAACAGCTATTAATACTGATGTGATGGATGCATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CCA 90 bp AAAAATAATGGCTATTGCCCTTCTGTACAAATAACTCAGGTAATGAAAAGTGGCTCTCTTTTTCCTTGGTaGCATCACTTTATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: KNNGYCPSVQITQVMKSGSLFPW*HHFIKA
Trigger: TGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGA...GCCACTTTTCATTACCTGAGTTATTTGTACAGAAGGGCAATAGCCATTATTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS CCA 90 bp CTCTCCCTCTCCCAAGGGAGAAGGGCTGGGGAGTCGCTCCGTCCCTaGGAACTCAACCGCCTCCCGAGAGCGCGCAGGAGCTGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LSLSQGRRAGESLRP*ELNRLPRARRSWPG
Trigger: CCCCGGCCAGCTCCTGCGCGCTCTCGGGAGGCGGTTGAGTTCCCAGGGACGGAGCGACTCCCCAGCCCTTCTCCCTTGGGAGAGGGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS CCA 90 bp GGGCTGCGCCTGGCGTGGGCTCTCCCTCTCCCAAGGGAGAAGGGCTaGGGAGTCGCTCCGTCCCTGGGAACTCAACCGCCTCCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: GLRLAWALPLPREKG*GVAPSLGTQPPPES
Trigger: GCTCTCGGGAGGCGGTTGAGTTCCCAGGGACGGAGCGACTCCCCAGCCCTTCTCCCTTGGGAGAGGGAGAGCCCACGCCAGGCGCAGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS CCA 90 bp ACCCGCCGCCGGGCACTCCCAGCCCGCCCATCTCGCCTTCTCCATTaGCTAAACCGCGGCTCAGGGGCCGCCCTGCTGCGTCTCTCATTT +
Preference number: 5 (lower is better)
Translates to: TRRRALPARPSRLLH*LNRGSGAALLRLSF
Trigger: AAATGAGAGACGCAGCAGGGCGGCCCCTGAGCCGCGGTTTAGCCAATGGAGAAGGCGAGATGGGCGGGCTGGGAGTGCCCGGCGGCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509376.5
CDS GCA 90 bp GCCAGCACCATACTTCCTGTAAAGCTGACAGCGGCGGCATCCGAGTaGATTTTCAGGCAGCTCACACCCGGCTCGCCGCCCAGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: ASTILPVKLTAAASE*IFRQLTPGSPPRLP
Trigger: CGGGAGCCTGGGCGGCGAGCCGGGTGTGAGCTGCCTGAAAATGCACTCGGATGCCGCCGCTGTCAGCTTTACAGGAAGTATGGTGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506673.5
CDS GCA 90 bp GGGGGAAATTCACTTGGGGACCAAGAACCTAAGCGTGAAGAGGGCTaGGCCTGGCGTGGGCTCTCCCTCTCCCAAGGGAGAAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GGNSLGDQEPKREEG*AWRGLSLSQGRRAG
Trigger: CCCAGCCCTTCTCCCTTGGGAGAGGGAGAGCCCACGCCAGGCGCAGCCCTCTTCACGCTTAGGTTCTTGGTCCCCAAGTGAATTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS CCA 90 bp AATTCACTTGGGGACCAAGAACCTAAGCGTGAAGAGGGCTGCGCCTaGCGTGGGCTCTCCCTCTCCCAAGGGAGAAGGGCTGGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: NSLGDQEPKREEGCA*RGLSLSQGRRAGES
Trigger: CGACTCCCCAGCCCTTCTCCCTTGGGAGAGGGAGAGCCCACGCCAGGCGCAGCCCTCTTCACGCTTAGGTTCTTGGTCCCCAAGTGAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS-3UTR CAA 90 bp GCTGGTCCTTTTCTCCTGCTCTGCAAGGGTGCCAGCCAGCAGCTCGCAATCACTAAAGCAACCCACGTTTaGGTCTCATTTACAGACACC +
Preference number: 5 (lower is better)
Translates to: AGPFLLLCKGASQQLAITKATHV*VSFTDT
Trigger: GGTGTCTGTAAATGAGACCAAAACGTGGGTTGCTTT...AGTGATTGCGAGCTGCTGGCTGGCACCCTTGCAGAGCAGGAGAAAAGGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR CAA 90 bp CAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGATCTCGCCTTCTCCATaGGCTAAACCGCGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: QQAELANSIANTNMSLRKISPSP*AKPRLR
Trigger: CCTGAGCCGCGGTTTAGCCAATGGAGAAGGCGAGAT...CTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381441.7
ENST00000509376.5
CDS-3UTR CAA 90 bp CACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTCCGCAGACTTCCTGTTaGGTGATCGTCTTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: HQHVPAKGKQCKRSSMRFPQTSC*VIVLAN
Trigger: ATTGGCCAAGACGATCACCAAACAGGAAGTCTGCGG...AAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR CAA 90 bp CAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGATGGAAATCCTCACCCTaGTGCCCCGCTCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: QFNSKHQHVPAKGKQCKRWKSSP*CPARSL
Trigger: GAGCGAGCGAGCGGGGCACAAGGGTGAGGATTTCCA...TCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451288.6
CDS-3UTR CAA 90 bp CAGTGTTTATGTCTAGGCTGCGCTGGTCCTTTTCCTGGACGTCAAGGGCAGATGTCTCATCATCCTACATaGACAGGCCTGGACCAGATG +
Preference number: 5 (lower is better)
Translates to: QCLCLGCAGPFPGRQGQMSHHPT*TGLDQM
Trigger: CATCTGGTCCAGGCCTGTCAATGTAGGATGATGAGA...CATCTGCCCTTGACGTCCAGGAAAAGGACCAGCGCAGCCTAGACATAAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512199.5
CDS-3UTR CAA 90 bp GCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACCCGCAGACTTCCTGTTaGGTGATCGTCTTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: AELANSIANTNMSLRKGNPQTSC*VIVLAN
Trigger: ATTGGCCAAGACGATCACCAAACAGGAAGTCTGCGG...GTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR CAA 90 bp GCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGAATGCTGGTGGTTTCTaGTCCACTGCCTGCAATGGA +
Preference number: 5 (lower is better)
Translates to: ATQQAELANSIANTNMSLNAGGF*STACNG
Trigger: TCCATTGCAGGCAGTGGACAAGAAACCACCAGCATT...CAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCTGGAAATCCTCACCCTaGTGCCCCGCTCGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: MFCASNFQARTSITTCSPWKSSP*CPARSL
Trigger: GAGCGAGCGAGCGGGGCACAAGGGTGAGGATTTCCA...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509068.5
CDS-3UTR CAA 90 bp CATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAATGCTGGTGGTTTCTaGTCCACTGCCTGCAATGGA +
Preference number: 5 (lower is better)
Translates to: HVPAKGKQCKRSSMRFDTNAGGF*STACNG
Trigger: TCCATTGCAGGCAGTGGACAAGAAACCACCAGCATT...TGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AACAATGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGCCGCAGACTTCCTGTTaGGTGATCGTCTTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: NNATQQAELANSIANTNMPQTSC*VIVLAN
Trigger: ATTGGCCAAGACGATCACCAAACAGGAAGTCTGCGG...CATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR CAA 90 bp CACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 5 (lower is better)
Translates to: HQHVPAKGKQCKRSSMRFITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...AAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CAA 90 bp AACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGATCTCGCCTTCTCCATaGGCTAAACCGCGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: NSNLWLMGDKTVVTVTLSISPSP*AKPRLR
Trigger: CCTGAGCCGCGGTTTAGCCAATGGAGAAGGCGAGAT...CGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381441.7
ENST00000509376.5
CDS-3UTR CAA 90 bp CAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAGCACCACTCAGCCCTTaGGAAATCCTCACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: QFNSKHQHVPAKGKQCKRAPLSP*EILTLV
Trigger: CACAAGGGTGAGGATTTCCAAAGGGCTGAGTGGTGC...TCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451288.6
CDS-3UTR CAA 90 bp GCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCCCAACTCAGTAAGTTaGACTCACGTTTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: ATQQAELANSIANTNMSLPNSVS*THVFWF
Trigger: GAACCAGAAAACGTGAGTCAAACTTACTGAGTTGGG...CAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR CAA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCGCCGACATCATACCATaGCACTCCAGCCTGGCGACA +
Preference number: 5 (lower is better)
Translates to: MFCASNFQARTSITTCSPADIIP*HSSLAT
Trigger: TGTCGCCAGGCTGGAGTGCAATGGTATGATGTCGGC...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000509068.5
ENST00000509376.5
CDS-3UTR CAA 90 bp TCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCATCACTTTATTAAAGCAGTCCCGCAGACTTCCTGTTaGGTGATCGTCTTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: SRGRSSLFPWWHHFIKAVPQTSC*VIVLAN
Trigger: ATTGGCCAAGACGATCACCAAACAGGAAGTCTGCGG...GACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
CDS-3UTR CAA 90 bp AATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCAGTCCCAACATGCACTaGGCAGTGTTTATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: NSKHQHVPAKGKQCKRSSSPNMH*AVFMSR
Trigger: CCTAGACATAAACACTGCCAAGTGCATGTTGGGACT...GCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000510808.1
CDS-3UTR CAA 90 bp TCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAAGTCCCAACATGCACTaGGCAGTGTTTATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: SLRKGNSAREAACALIQTSPNMH*AVFMSR
Trigger: CCTAGACATAAACACTGCCAAGTGCATGTTGGGACT...TGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CAA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAAGTCCCAACATGCACTaGGCAGTGTTTATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: LRKGNSAREAACALIQTASPNMH*AVFMSR
Trigger: CCTAGACATAAACACTGCCAAGTGCATGTTGGGACT...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CAA 90 bp AGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 5 (lower is better)
Translates to: SKHQHVPAKGKQCKRSSMITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...CATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CAA 90 bp AACAATGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGAATGCTGGTGGTTTCTaGTCCACTGCCTGCAATGGA +
Preference number: 5 (lower is better)
Translates to: NNATQQAELANSIANTNMNAGGF*STACNG
Trigger: TCCATTGCAGGCAGTGGACAAGAAACCACCAGCATT...CATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp CAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGTTCAAATCACGGATCTaGCTGACCACGACAGCATTT +
Preference number: 5 (lower is better)
Translates to: QQAELANSIANTNMSLRKFKSRI*LTTTAF
Trigger: AAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAA...CTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp GCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGCATGACAACAGAGTATaGCAATGTGGAGTTCGAAAC +
Preference number: 5 (lower is better)
Translates to: ASRAGQFNSKHQHVPAKGHDNRV*QCGVRN
Trigger: GTTTCGAACTCCACATTGCAATACTCTGTTGTCATG...CCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCCATGACAACAGAGTATaGCAATGTGGAGTTCGAAAC +
Preference number: 5 (lower is better)
Translates to: KHQHVPAKGKQCKRSSMRHDNRV*QCGVRN
Trigger: GTTTCGAACTCCACATTGCAATACTCTGTTGTCATG...GCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp CACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTTGGGAGTCACAGGACTaGCACACTTTTATGAATGTA +
Preference number: 5 (lower is better)
Translates to: HQHVPAKGKQCKRSSMRFWESQD*HTFMNV
Trigger: TACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCA...AAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCGCACCACTCAGCCCTTaGGAAATCCTCACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: MFCASNFQARTSITTCSPAPLSP*EILTLV
Trigger: CACAAGGGTGAGGATTTCCAAAGGGCTGAGTGGTGC...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509068.5
CDS-3UTR CAA 90 bp GTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACCCCAACTCAGTAAGTTaGACTCACGTTTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: VPAKGKQCKRSSMRFDTNPNSVS*THVFWF
Trigger: GAACCAGAAAACGTGAGTCAAACTTACTGAGTTGGG...GTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR CAA 90 bp ATCACAGTGAGGACGTTGGCAAATTCACCAATCTGTAGTGTAAATACAAACTGCGCCGACATCATACCATaGCACTCCAGCCTGGCGACA +
Preference number: 5 (lower is better)
Translates to: ITVRTLANSPICSVNTNCADIIP*HSSLAT
Trigger: TGTCGCCAGGCTGGAGTGCAATGGTATGATGTCGGC...GCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR CAA 90 bp CAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAGAATATTTGCCAGTGTaGAGAGATGAGAGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: QAELANSIANTNMSLRKGEYLPV*RDESSA
Trigger: AGCTGAACTCTCATCTCTCAACACTGGCAAATATTC...TCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp GAGGCAGGTCTTCTCTTTTTCCTTGGTGGCATCACTTTATTAAAGCAGTCTGAACCGCAGACTTCCTGTTaGGTGATCGTCTTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: EAGLLFFLGGITLLKQSEPQTSC*VIVLAN
Trigger: ATTGGCCAAGACGATCACCAAACAGGAAGTCTGCGG...TTCAGACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
CDS-3UTR CAA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCCCGCAGACTTCCTGTTaGGTGATCGTCTTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: MFCASNFQARTSITTCSPPQTSC*VIVLAN
Trigger: ATTGGCCAAGACGATCACCAAACAGGAAGTCTGCGG...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509068.5
CDS-3UTR CAA 90 bp AACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATAATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 5 (lower is better)
Translates to: NMSLRKGNSAREAACALIITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...TATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CAA 90 bp TGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTCACGACAGCATTTACTaGTTCAAATGCACCATTACC +
Preference number: 5 (lower is better)
Translates to: CHTASRAGQFNSKHQHVPHDSIY*FKCTIT
Trigger: GGTAATGGTGCATTTGAACAAGTAAATGCTGTCGTG...AGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp TCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACATTCAAATCACGGATCTaGCTGACCACGACAGCATTT +
Preference number: 5 (lower is better)
Translates to: SLRKGNSAREAACALIQTFKSRI*LTTTAF
Trigger: AAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAA...TGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGAAAGCAACCCACGTTTaGGTCTCATTTACAGACACC +
Preference number: 5 (lower is better)
Translates to: RAGQFNSKHQHVPAKGKQKATHV*VSFTDT
Trigger: GGTGTCTGTAAATGAGACCAAAACGTGGGTTGCTTT...CTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp GCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACTGGGAGTCACAGGACTaGCACACTTTTATGAATGTA +
Preference number: 5 (lower is better)
Translates to: AELANSIANTNMSLRKGNWESQD*HTFMNV
Trigger: TACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCA...GTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGTGGGAGTCACAGGACTaGCACACTTTTATGAATGTA +
Preference number: 5 (lower is better)
Translates to: SKHQHVPAKGKQCKRSSMWESQD*HTFMNV
Trigger: TACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCA...CATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp CAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATTCTCTAAAACTGATATaGACAGCGGCGGCATCCGAG +
Preference number: 5 (lower is better)
Translates to: QNCGNSDSLAAMHKVLGHSLKLI*TAAASE
Trigger: CTCGGATGCCGCCGCTGTCAATATCAGTTTTAGAGA...ATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS TCA 90 bp GTTCTATCGAATTCTCACCCATGTGAGAATAAACCTCAGCTTGGCTaGTATTCTGGGCGGGCACAGACCATTAAGTACAGGAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: VLSNSHPCENKPQLG*YSGRAQTIKYRKIS
Trigger: AGAGATCTTCCTGTACTTAATGGTCTGTGCCCGCCCAGAATATCAGCCAAGCTGAGGTTTATTCTCACATGGGTGAGAATTCGATAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513800.5
CDS-3UTR CAA 90 bp GGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGGAATATTTGCCAGTGTaGAGAGATGAGAGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GQFNSKHQHVPAKGKQCKEYLPV*RDESSA
Trigger: AGCTGAACTCTCATCTCTCAACACTGGCAAATATTC...CTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp AGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTGACAAACCGCAGACTTCCTGTTaGGTGATCGTCTTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: RSSMRFDTNSNLWLMGDKPQTSC*VIVLAN
Trigger: ATTGGCCAAGACGATCACCAAACAGGAAGTCTGCGG...TTTGTCACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
CDS-3UTR CAA 90 bp GGGGCCAGATTTTTCCTAATAACAGTCCCAACATGCACTTGGCAGTGTTTATGTAGTCCCAACATGCACTaGGCAGTGTTTATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: GARFFLITVPTCTWQCLCSPNMH*AVFMSR
Trigger: CCTAGACATAAACACTGCCAAGTGCATGTTGGGACT...ACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000512199.5
CDS-3UTR CAA 90 bp GTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 5 (lower is better)
Translates to: VPAKGKQCKRSSMRFDTNEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...GTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CAA 90 bp GCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 5 (lower is better)
Translates to: AGQFNSKHQHVPAKGKQCEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...GCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CAA 90 bp CATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 5 (lower is better)
Translates to: HVPAKGKQCKRSSMRFDTEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...TGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CAA 90 bp AACAATGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 5 (lower is better)
Translates to: NNATQQAELANSIANTNMITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...CATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CAA 90 bp TTGATCCGTCATTGTAGGCACATGTGGCCACACCATTTTGTAAGCATCTGGCTTATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 5 (lower is better)
Translates to: LIRHCRHMWPHHFVSIWLITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...AAGCCAGATGCTTACAAAATGGTGTGGCCACATGTGCCTACAATGACGGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR CAA 90 bp CACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTTCACTTATAGTATGCTaGTTTTCTCAAAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: HQHVPAKGKQCKRSSMRFSLIVC*FSQKAG
Trigger: TCCAGCCTTTTGAGAAAACAAGCATACTATAAGTGA...AAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAAGGCAGTTTTCAAATCACGGATCTaGCTGACCACGACAGCATTT +
Preference number: 5 (lower is better)
Translates to: RVSTLPLSSQRGLFFKAVFKSRI*LTTTAF
Trigger: AAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAA...AACTGCCTTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp CTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCACATGACAACAGAGTATaGCAATGTGGAGTTCGAAAC +
Preference number: 5 (lower is better)
Translates to: LANSIANTNMSLRKGNSAHDNRV*QCGVRN
Trigger: GTTTCGAACTCCACATTGCAATACTCTGTTGTCATG...TGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp TCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAAAAGCAACCCACGTTTaGGTCTCATTTACAGACACC +
Preference number: 5 (lower is better)
Translates to: SIANTNMSLRKGNSAREAKATHV*VSFTDT
Trigger: GGTGTCTGTAAATGAGACCAAAACGTGGGTTGCTTT...TGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTTGTCTTTATACAATGTGGCCTCCAGTaGATCCGTCATTGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: SDSLAAMHKVLGHLFVFIQCGLQ*IRHCRH
Trigger: GTGCCTACAATGACGGATCAACTGGAGGCCACATTG...TATAAAGACAAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477560.5
ENST00000509376.5
CDS-3UTR CAA 90 bp AAATTTCTCCATGCCTTCAGGGCCTACAACATCATCAGTTCCTGCATATTCATACAATGTGGCCTCCAGTaGATCCGTCATTGTAGGCAC +
Preference number: 5 (lower is better)
Translates to: KFLHAFRAYNIISSCIFIQCGLQ*IRHCRH
Trigger: GTGCCTACAATGACGGATCAACTGGAGGCCACATTG...TATGAATATGCAGGAACTGATGATGTTGTAGGCCCTGAAGGCATGGAGAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509376.5
CDS TCA 90 bp CAGCTTATTAAGGGTGTGGTAGATCTTATGAATATTTGCCAGTGTTaGGAGATGAGAGTTCAGCTGAAAATTGACAGCGGCGGCATCCGA +
Preference number: 5 (lower is better)
Translates to: QLIKGVVDLMNICQC*EMRVQLKIDSGGIR
Trigger: TCGGATGCCGCCGCTGTCAATTTTCAGCTGAACTCTCATCTCTCAACACTGGCAAATATTCATAAGATCTACCACACCCTTAATAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000477560.5
ENST00000502930.5
ENST00000504113.5
ENST00000509376.5
ENST00000511675.5
ENST00000513800.5
CDS TCA 90 bp CAGCTTATTAAGGGTGTGGTAGATCTTATGAATATTTGCCAGTGTTaGGAGATGAGAGTTCAGCTGAAAATCCGCCTTTCTCACGGAGCC +
Preference number: 5 (lower is better)
Translates to: QLIKGVVDLMNICQC*EMRVQLKIRLSHGA
Trigger: GGCTCCGTGAGAAAGGCGGATTTTCAGCTGAACTCTCATCTCTCAACACTGGCAAATATTCATAAGATCTACCACACCCTTAATAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451288.6
ENST00000505403.5
ENST00000509068.5
CDS-3UTR CAA 90 bp TCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGAATATTTGCCAGTGTaGAGAGATGAGAGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: SIANTNMSLRKGNSAREAEYLPV*RDESSA
Trigger: AGCTGAACTCTCATCTCTCAACACTGGCAAATATTC...TGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp CATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACATCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: HVPAKGKQCKRSSMRFDTSCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...TGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp AGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGAAAATAACCCATGTTTaGTGCATCCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SKHQHVPAKGKQCKRSSMKITHV*CIQFPS
Trigger: GCTTGGAAATTGGATGCACAAAACATGGGTTATTTT...CATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp CAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATTTCTGTTGTATCACATaGGAGAGAAGTCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: QHVPAKGKQCKRSSMRFDFCCIT*ERSHSF
Trigger: AAAGGAATGACTTCTCTCCAATGTGATACAACAGAA...ATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp CTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 5 (lower is better)
Translates to: LRKGNSAREAACALIQTAEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...TGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CAA 90 bp GCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCTCACTTATAGTATGCTaGTTTTCTCAAAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: AGQFNSKHQHVPAKGKQCSLIVC*FSQKAG
Trigger: TCCAGCCTTTTGAGAAAACAAGCATACTATAAGTGA...GCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp TTGATCCGTCATTGTAGGCACATGTGGCCACACCATTTTGTAAGCATCTGGCTTCACGACAGCATTTACTaGTTCAAATGCACCATTACC +
Preference number: 5 (lower is better)
Translates to: LIRHCRHMWPHHFVSIWLHDSIY*FKCTIT
Trigger: GGTAATGGTGCATTTGAACAAGTAAATGCTGTCGTG...AAGCCAGATGCTTACAAAATGGTGTGGCCACATGTGCCTACAATGACGGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR CAA 90 bp GCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCGAACTGTATGACCTGTaGCCTTTAAAGTGTAACTTT +
Preference number: 5 (lower is better)
Translates to: AGQFNSKHQHVPAKGKQCELYDL*PLKCNF
Trigger: AAAGTTACACTTTAAAGGCAACAGGTCATACAGTTC...GCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp CCAAACCTGCCTAGGCCAGTCACCACTGCAAAACAAATGCATCCATCACATCAGGAACTGTATGACCTGTaGCCTTTAAAGTGTAACTTT +
Preference number: 5 (lower is better)
Translates to: PNLPRPVTTAKQMHPSHQELYDL*PLKCNF
Trigger: AAAGTTACACTTTAAAGGCAACAGGTCATACAGTTC...CTGATGTGATGGATGCATTTGTTTTGCAGTGGTGACTGGCCTAGGCAGGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTTTATTTTTCAAGGCAGTTCATGACAACAGAGTATaGCAATGTGGAGTTCGAAAC +
Preference number: 5 (lower is better)
Translates to: RVSTLPLSSQRGLFFKAVHDNRV*QCGVRN
Trigger: GTTTCGAACTCCACATTGCAATACTCTGTTGTCATG...AACTGCCTTGAAAAATAAACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp ATAAAATCAAGACAATCAAGGGTAAGCACTCTGCCGCTCAGCAGTCAAAGAGGTAAAGCAACCCACGTTTaGGTCTCATTTACAGACACC +
Preference number: 5 (lower is better)
Translates to: IKSRQSRVSTLPLSSQRGKATHV*VSFTDT
Trigger: GGTGTCTGTAAATGAGACCAAAACGTGGGTTGCTTT...ACCTCTTTGACTGCTGAGCGGCAGAGTGCTTACCCTTGATTGTCTTGATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AAAGGCTGGAAAATTACATACCATGAAAGCTTAACTGAAAATTCAAGCCACAACGCCGACATCATACCATaGCACTCCAGCCTGGCGACA +
Preference number: 5 (lower is better)
Translates to: KGWKITYHESLTENSSHNADIIP*HSSLAT
Trigger: TGTCGCCAGGCTGGAGTGCAATGGTATGATGTCGGC...GTTGTGGCTTGAATTTTCAGTTAAGCTTTCATGGTATGTAATTTTCCAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS TCA 90 bp CTCCTTCTGTTCCCTCAGCACATCACCAGCATTTTACTCTTTCCTTaGGAATTTCTCCACGCCACATTCTCTAAAACTGATATTGACAGC +
Preference number: 5 (lower is better)
Translates to: LLLFPQHITSILLFP*EFLHATFSKTDIDS
Trigger: GCTGTCAATATCAGTTTTAGAGAATGTGGCGTGGAGAAATTCTCAAGGAAAGAGTAAAATGCTGGTGATGTGCTGAGGGAACAGAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR CAA 90 bp CAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAGAATATTTGCCAGTGTaGAGAGATGAGAGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: QFNSKHQHVPAKGKQCKREYLPV*RDESSA
Trigger: AGCTGAACTCTCATCTCTCAACACTGGCAAATATTC...TCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp AACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATAAAAATAACCCATGTTTaGTGCATCCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: NMSLRKGNSAREAACALIKITHV*CIQFPS
Trigger: GCTTGGAAATTGGATGCACAAAACATGGGTTATTTT...TATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp ACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAATTCTGTTGTATCACATaGGAGAGAAGTCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: TASRAGQFNSKHQHVPAKFCCIT*ERSHSF
Trigger: AAAGGAATGACTTCTCTCCAATGTGATACAACAGAA...TTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp ACAAACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCAGTCCCAACATGCACTaGGCAGTGTTTATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: TNSNLWLMGDKTVVTVTLSPNMH*AVFMSR
Trigger: CCTAGACATAAACACTGCCAAGTGCATGTTGGGACT...GAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CAA 90 bp TACTTTTCTTGGCAGATAAATCATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTGAGTCCCAACATGCACTaGGCAGTGTTTATGTCTAGG +
Preference number: 5 (lower is better)
Translates to: YFSWQINHLQRQVFSFSLSPNMH*AVFMSR
Trigger: CCTAGACATAAACACTGCCAAGTGCATGTTGGGACT...CAAGGAAAAAGAGAAGACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR CAA 90 bp AATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCAGCTCACTTATAGTATGCTaGTTTTCTCAAAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: NSKHQHVPAKGKQCKRSSSLIVC*FSQKAG
Trigger: TCCAGCCTTTTGAGAAAACAAGCATACTATAAGTGA...GCTGCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp ATTTCAGTTAAGCTGGGAGTCACAGGACTTGCACACTTTTATGAATGTAATGCAAATGCTGGTGGTTTCTaGTCCACTGCCTGCAATGGA +
Preference number: 5 (lower is better)
Translates to: ISVKLGVTGLAHFYECNANAGGF*STACNG
Trigger: TCCATTGCAGGCAGTGGACAAGAAACCACCAGCATT...TGCATTACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCAGCTTAACTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AGAGCTGGCCAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGGAACTGTATGACCTGTaGCCTTTAAAGTGTAACTTT +
Preference number: 5 (lower is better)
Translates to: RAGQFNSKHQHVPAKGKQELYDL*PLKCNF
Trigger: AAAGTTACACTTTAAAGGCAACAGGTCATACAGTTC...CTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTGGCCAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGTGGGAGTCACAGGACTaGCACACTTTTATGAATGTA +
Preference number: 5 (lower is better)
Translates to: SNLWLMGDKTVVTVTLSLWESQD*HTFMNV
Trigger: TACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCA...CAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp ACATGCTATCATGTCTACTTTTCTTGGCAGATAAATCATCTCCAGAGGCAGGTCGAATATTTGCCAGTGTaGAGAGATGAGAGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: TCYHVYFSWQINHLQRQVEYLPV*RDESSA
Trigger: AGCTGAACTCTCATCTCTCAACACTGGCAAATATTC...GACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000502930.5
ENST00000506673.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp ATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCATAAAGTCCAAAATAACCCATGTTTaGTGCATCCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: MGDKTVVTVTLSLLCIKSKITHV*CIQFPS
Trigger: GCTTGGAAATTGGATGCACAAAACATGGGTTATTTT...GGACTTTATGCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp AACAATGCCACACAGCAAGCAGAGCTGGCCAATTCAATAGCAAACACCAACATGAAAATAACCCATGTTTaGTGCATCCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: NNATQQAELANSIANTNMKITHV*CIQFPS
Trigger: GCTTGGAAATTGGATGCACAAAACATGGGTTATTTT...CATGTTGGTGTTTGCTATTGAATTGGCCAGCTCTGCTTGCTGTGTGGCATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp TTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAAGCTTCTGTTGTATCACATaGGAGAGAAGTCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: FNSKHQHVPAKGKQCKRSFCCIT*ERSHSF
Trigger: AAAGGAATGACTTCTCTCCAATGTGATACAACAGAA...GCTTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp CAATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 5 (lower is better)
Translates to: QFNSKHQHVPAKGKQCKREAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...TCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
CDS-3UTR CAA 90 bp AGTGACTCTCTCGCTGCTATGCATAAAGTCCTAGGACATCTGTTTGTCTTTATAATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 5 (lower is better)
Translates to: SDSLAAMHKVLGHLFVFIITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...TATAAAGACAAACAGATGTCCTAGGACTTTATGCATAGCAGCGAGAGAGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp ATGCTATCATGTCTACTTTTCTTGGCAGATAAATCATCTCCAGAGGCAGGTCTTATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 5 (lower is better)
Translates to: MLSCLLFLADKSSPEAGLITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...AAGACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp AATTCAATAGCAAACACCAACATGTCCCTGCGAAAGGGAAACAGTGCAAGAGAACACGACAGCATTTACTaGTTCAAATGCACCATTACC +
Preference number: 5 (lower is better)
Translates to: NSIANTNMSLRKGNSAREHDSIY*FKCTIT
Trigger: GGTAATGGTGCATTTGAACAAGTAAATGCTGTCGTG...TTCTCTTGCACTGTTTCCCTTTCGCAGGGACATGTTGGTGTTTGCTATTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp TTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCGCTGCTATGCGAACTGTATGACCTGTaGCCTTTAAAGTGTAACTTT +
Preference number: 5 (lower is better)
Translates to: LWLMGDKTVVTVTLSLLCELYDL*PLKCNF
Trigger: AAAGTTACACTTTAAAGGCAACAGGTCATACAGTTC...GCATAGCAGCGAGAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp ATCTCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCATCACTTTATTAAAGCACATTTTACTCTTTCCTaGAGAATTTCTCCACGCCAC +
Preference number: 5 (lower is better)
Translates to: ISRGRSSLFPWWHHFIKAHFTLS*RISPRH
Trigger: GTGGCGTGGAGAAATTCTCAAGGAAAGAGTAAAATG...TGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS GCA 90 bp CTCCACTGTGTTCTCATATTTATGCAAGGGAATGCTGGAACCCAGTaGTTACACACACTGGATGCCAAAATTAAATACACCATTCTAAAG +
Preference number: 5 (lower is better)
Translates to: LHCVLIFMQGNAGTQ*LHTLDAKIKYTILK
Trigger: CTTTAGAATGGTGTATTTAATTTTGGCATCCAGTGTGTGTAAGCACTGGGTTCCAGCATTCCCTTGCATAAATATGAGAACACAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS-3UTR CAA 90 bp TCCAGAGGCAGGTCTTCTCTTTTTCCTTGGTGGCATCACTTTATTAAAGCAGTCTTCTGTTGTATCACATaGGAGAGAAGTCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: SRGRSSLFPWWHHFIKAVFCCIT*ERSHSF
Trigger: AAAGGAATGACTTCTCTCCAATGTGATACAACAGAA...GACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCTGCCTCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR CAA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTATCACAGTGAGGACGTaGGCAAATTCACCAATCTGT +
Preference number: 5 (lower is better)
Translates to: MFCASNFQARTSITTFSGITVRT*ANSPIC
Trigger: ACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT...ACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS-3UTR CAA 90 bp AGGGGCCAGATTTTTCCTAATAACAGTCCCAACATGCACTTGGCAGTGTTTATGTCACTTATAGTATGCTaGTTTTCTCAAAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RGQIFPNNSPNMHLAVFMSLIVC*FSQKAG
Trigger: TCCAGCCTTTTGAGAAAACAAGCATACTATAAGTGA...CATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAATCTGGCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477560.5
CDS-3UTR CAA 90 bp CATTCAATAGCACCAGATAGTTGGGGTGAAAACATGTCATCTCTATATTTCCTCTTCAAATCACGGATCTaGCTGACCACGACAGCATTT +
Preference number: 5 (lower is better)
Translates to: HSIAPDSWGENMSSLYFLFKSRI*LTTTAF
Trigger: AAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAA...GAGGAAATATAGAGATGACATGTTTTCACCCCAACTATCTGGTGCTATTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp CATTCCAAGCACCTTTTACTTGAAAAGGCTTCTTCTTCAGTCTTTATTCTAGTCTGCTGCGTCTCTCATTaGACAAAAGGAGTGCCCATA +
Preference number: 5 (lower is better)
Translates to: HSKHLLLEKASSSVFILVCCVSH*TKGVPI
Trigger: TATGGGCACTCCTTTTGTCAAATGAGAGACGCAGCA...GACTAGAATAAAGACTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509376.5
CDS-3UTR CAA 90 bp TGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTTCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: CKRSSMRFDTNSNLWLMGSCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...ACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp GAGGCAGGTCTTCTCTTTTTCCTTGGTGGCATCACTTTATTAAAGCAGTCTGAATCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: EAGLLFFLGGITLLKQSESCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...TTCAGACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAGACCTGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506673.5
ENST00000507741.5
CDS-3UTR CAA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCTCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: MFCASNFQARTSITTCSPSCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000509068.5
ENST00000509376.5
CDS-3UTR CAA 90 bp ATTTGGCATATGCCTCTAAAAAGTTATGACTCCTACCTCCTTCCAGAAGTTGGCAAAATAACCCATGTTTaGTGCATCCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: IWHMPLKSYDSYLLPEVGKITHV*CIQFPS
Trigger: GCTTGGAAATTGGATGCACAAAACATGGGTTATTTT...GCCAACTTCTGGAAGGAGGTAGGAGTCATAACTTTTTAGAGGCATATGCCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000509376.5
CDS-3UTR CAA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACCTGTAGTCCCAAAATAACCCATGTTTaGTGCATCCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: MFCASNFQARTSITTCSPKITHV*CIQFPS
Trigger: GCTTGGAAATTGGATGCACAAAACATGGGTTATTTT...GGGACTACAGGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477560.5
ENST00000509068.5
ENST00000509376.5
CDS-3UTR CAA 90 bp AGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATGGCTAATGGGTGACAAAGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 5 (lower is better)
Translates to: RSSMRFDTNSNLWLMGDKEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...TTTGTCACCCATTAGCCATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
ENST00000510808.1
ENST00000512199.5
CDS-3UTR CAA 90 bp ATGCTATCATGTCTACTTTTCTTGGCAGATAAATCATCTCCAGAGGCAGGTCTTGAAGCAGCATGCGCTTaGATACAAACAGCAATTTAT +
Preference number: 5 (lower is better)
Translates to: MLSCLLFLADKSSPEAGLEAACA*IQTAIY
Trigger: ATAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTC...AAGACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp CATTCAATAGCACCAGATAGTTGGGGTGAAAACATGTCATCTCTATATTTCCTCCACGACAGCATTTACTaGTTCAAATGCACCATTACC +
Preference number: 5 (lower is better)
Translates to: HSIAPDSWGENMSSLYFLHDSIY*FKCTIT
Trigger: GGTAATGGTGCATTTGAACAAGTAAATGCTGTCGTG...GAGGAAATATAGAGATGACATGTTTTCACCCCAACTATCTGGTGCTATTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS TCA 90 bp CAGCTTATTAAGGGTGTGGTAGATCTTATGAATATTTGCCAGTGTTaGGAGATGAGAGTTCAGCTGAAAATCTCCACTGTGTTCTCATAT +
Preference number: 5 (lower is better)
Translates to: QLIKGVVDLMNICQC*EMRVQLKISTVFSY
Trigger: ATATGAGAACACAGTGGAGATTTTCAGCTGAACTCTCATCTCTCAACACTGGCAAATATTCATAAGATCTACCACACCCTTAATAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS-3UTR CAA 90 bp ACAAACAGCAATTTATGGCTAATGGGTGACAAAACTGTGGTAACAGTGACTCTCTCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: TNSNLWLMGDKTVVTVTLSCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...GAGAGTCACTGTTACCACAGTTTTGTCACCCATTAGCCATAAATTGCTGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp AAAGGGAAACAGTGCAAGAGAAGCAGCATGCGCTTTGATACAAACAGCAATTTATCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: KGKQCKRSSMRFDTNSNLSCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...TAAATTGCTGTTTGTATCAAAGCGCATGCTGCTTCTCTTGCACTGTTTCCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp ATGTTCAAATCACGGATCTTGCTGACCACGACAGCATTTACTTGTTCAAATGCAAAAATAACCCATGTTTaGTGCATCCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: MFKSRILLTTTAFTCSNAKITHV*CIQFPS
Trigger: GCTTGGAAATTGGATGCACAAAACATGGGTTATTTT...TGCATTTGAACAAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp ATCACAGTGAGGACGTTGGCAAATTCACCAATCTGTAGTGTAAATACAAACTGCAAAATAACCCATGTTTaGTGCATCCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: ITVRTLANSPICSVNTNCKITHV*CIQFPS
Trigger: GCTTGGAAATTGGATGCACAAAACATGGGTTATTTT...GCAGTTTGTATTTACACTACAGATTGGTGAATTTGCCAACGTCCTCACTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp ATGTTCAAATCACGGATCTTGCTGACCACGACAGCATTTACTTGTTCAAATGCATTCTGTTGTATCACATaGGAGAGAAGTCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: MFKSRILLTTTAFTCSNAFCCIT*ERSHSF
Trigger: AAAGGAATGACTTCTCTCCAATGTGATACAACAGAA...TGCATTTGAACAAGTAAATGCTGTCGTGGTCAGCAAGATCCGTGATTTGAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp ATGTTTTGTGCATCCAATTTCCAAGCTAGGACAAGCATAACTACGTTTTCTGGTTCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: MFCASNFQARTSITTFSGSCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...ACCAGAAAACGTAGTTATGCTTGTCCTAGCTTGGAAATTGGATGCACAAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502930.5
ENST00000507741.5
CDS-3UTR CAA 90 bp ATTTCAGTTAAGCTGGGAGTCACAGGACTTGCACACTTTTATGAATGTAATGCATTCTGTTGTATCACATaGGAGAGAAGTCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: ISVKLGVTGLAHFYECNAFCCIT*ERSHSF
Trigger: AAAGGAATGACTTCTCTCCAATGTGATACAACAGAA...TGCATTACATTCATAAAAGTGTGCAAGTCCTGTGACTCCCAGCTTAACTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334635.10
ENST00000381441.7
ENST00000451288.6
ENST00000477560.5
CDS-3UTR CAA 90 bp AGGTCAAGATTAATTGTTCTGCTAAACTCTAGGACATTGCACCACTGGTCTTTATTCTGTTGTATCACATaGGAGAGAAGTCATTCCTTT +
Preference number: 5 (lower is better)
Translates to: RSRLIVLLNSRTLHHWSLFCCIT*ERSHSF
Trigger: AAAGGAATGACTTCTCTCCAATGTGATACAACAGAA...TAAAGACCAGTGGTGCAATGTCCTAGAGTTTAGCAGAACAATTAATCTTGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000477560.5
ENST00000505634.5
ENST00000507741.5
ENST00000509376.5
CDS TCA 90 bp TCTAACAGGCCCTTGGAGTTACCAAAATTAACAAGTTCACTTATCTaGAAGAGAAGCGATTTAAAGAGCCTTGTTTTTCACAGTTCTATC +
Preference number: 5 (lower is better)
Translates to: SNRPLELPKLTSSLI*KRSDLKSLVFHSSI
Trigger: GATAGAACTGTGAAAAACAAGGCTCTTTAAATCGCTTCTCTTTCAGATAAGTGAACTTGTTAATTTTGGTAACTCCAAGGGCCTGTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513800.5
CDS-3UTR CAA 90 bp TTCTATACATGCTATCATGTCTACTTTTCTTGGCAGATAAATCATCTCCAGAGGTCATGTCTACTTTTCTaGGCAGATAAATCATCTCCA +
Preference number: 5 (lower is better)
Translates to: FYTCYHVYFSWQINHLQRSCLLF*ADKSSP
Trigger: TGGAGATGATTTATCTGCCAAGAAAAGTAGACATGA...CCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCATGTATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000502930.5
ENST00000506673.5
ENST00000507741.5
ENST00000509376.5
CDS-3UTR CAA 90 bp TCCAAGCACCTTTTACTTGAAAAGGCTTCTTCTTCAGTCTTTATTCTAGTCGAAAAAATAACCCATGTTTaGTGCATCCAATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SKHLLLEKASSSVFILVEKITHV*CIQFPS
Trigger: GCTTGGAAATTGGATGCACAAAACATGGGTTATTTT...TTCGACTAGAATAAAGACTGAAGAAGAAGCCTTTTCAAGTAAAAGGTGCTTGGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000502930.5
ENST00000507741.5
ENST00000509376.5
CDS CAA 72 bp CCGGGCACTCCCAGCCCGCCCATCTCGCCTTCTCCATaGGCTAAACCGCGGCTCAGGGGCCGCCCTGCTGCG +
Preference number: 6 (lower is better)
Translates to: PGTPSPPISPSP*AKPRLRGRPAA
Trigger: CGCAGCAGGGCGGCCCCTGAGCCGCGGTTTAGCCAATGGAGAAGGCGAGATGGGCGGGCTGGGAGTGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381441.7
ENST00000509376.5
ENST00000511675.5
CDS CCA 72 bp CGGGCACTCCCAGCCCGCCCATCTCGCCTTCTCCATTaGCTAAACCGCGGCTCAGGGGCCGCCCTGCTGCGT +
Preference number: 6 (lower is better)
Translates to: RALPARPSRLLH*LNRGSGAALLR
Trigger: ACGCAGCAGGGCGGCCCCTGAGCCGCGGTTTAGCCAATGGAGAAGGCGAGATGGGCGGGCTGGGAGTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381441.7
ENST00000509376.5
ENST00000511675.5
CDS CAA 90 bp GACCCGCCGCCGGGCACTCCCAGCCCGCCCATCTCGCCTTCTCCATaGGCTAAACCGCGGCTCAGGGGCCGCCCTGCTGCGTCTCTCATT +
Preference number: 6 (lower is better)
Translates to: DPPPGTPSPPISPSP*AKPRLRGRPAASLI
Trigger: AATGAGAGACGCAGCAGGGCGGCCCCTGAGCCGCGGTTTAGCCAATGGAGAAGGCGAGATGGGCGGGCTGGGAGTGCCCGGCGGCGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509376.5
CDS GCA 72 bp CCCACATCCCCGGCCCTGCCCGCTACAGCCCAACGCTaGCTCCACCTCCATGCACCCCGGACACTCCGATCT +
Preference number: 6 (lower is better)
Translates to: PTSPALPATAQR*LHLHAPRTLRS
Trigger: AGATCGGAGTGTCCGGGGTGCATGGAGGTGGAGGCAGCGTTGGGCTGTAGCGGGCAGGGCCGGGGATGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509068.5
CDS GCA 72 bp CCTGCCCGCTACAGCCCAACGCTGCCTCCACCTCCATaGACCCCGGACACTCCGATCTCGGCCCTTCATCGC +
Preference number: 6 (lower is better)
Translates to: PARYSPTLPPPP*TPDTPISALHR
Trigger: GCGATGAAGGGCCGAGATCGGAGTGTCCGGGGTGCATGGAGGTGGAGGCAGCGTTGGGCTGTAGCGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509068.5
CDS CCA 72 bp CTGGCGTGGGCTCTCCCTCTCCCAAGGGAGAAGGGCTaGGGAGTCGCTCCGTCCCTGGGAACTCAACCGCCT +
Preference number: 6 (lower is better)
Translates to: LAWALPLPREKG*GVAPSLGTQPP
Trigger: AGGCGGTTGAGTTCCCAGGGACGGAGCGACTCCCCAGCCCTTCTCCCTTGGGAGAGGGAGAGCCCACGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS CCA 72 bp GGGGACCAAGAACCTAAGCGTGAAGAGGGCTGCGCCTaGCGTGGGCTCTCCCTCTCCCAAGGGAGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: GDQEPKREEGCA*RGLSLSQGRRA
Trigger: AGCCCTTCTCCCTTGGGAGAGGGAGAGCCCACGCCAGGCGCAGCCCTCTTCACGCTTAGGTTCTTGGTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS CAA 72 bp GCCTTTCTCACGGAGCCGCCCGCACCACTCAGCCCTTaGGAAATCCTCACCCTTGTGCCCCGCTCGCTCGCT +
Preference number: 6 (lower is better)
Translates to: AFLTEPPAPLSP*EILTLVPRSLA
Trigger: AGCGAGCGAGCGGGGCACAAGGGTGAGGATTTCCAAAGGGCTGAGTGGTGCGGGCGGCTCCGTGAGAAAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000451288.6
ENST00000505403.5
ENST00000509068.5
CDS GCA 72 bp TCACTTGGGGACCAAGAACCTAAGCGTGAAGAGGGCTaGGCCTGGCGTGGGCTCTCCCTCTCCCAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: SLGDQEPKREEG*AWRGLSLSQGR
Trigger: TCTCCCTTGGGAGAGGGAGAGCCCACGCCAGGCGCAGCCCTCTTCACGCTTAGGTTCTTGGTCCCCAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS GCA 72 bp ATACTTCCTGTAAAGCTGACAGCGGCGGCATCCGAGTaGATTTTCAGGCAGCTCACACCCGGCTCGCCGCCC +
Preference number: 6 (lower is better)
Translates to: ILPVKLTAAASE*IFRQLTPGSPP
Trigger: GGGCGGCGAGCCGGGTGTGAGCTGCCTGAAAATGCACTCGGATGCCGCCGCTGTCAGCTTTACAGGAAGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506673.5
CDS GCA 72 bp TCTCTAAAACTGATATTGACAGCGGCGGCATCCGAGTaGATTTTCAGGCAGCTCACACCCGGCTCGCCGCCC +
Preference number: 6 (lower is better)
Translates to: SLKLILTAAASE*IFRQLTPGSPP
Trigger: GGGCGGCGAGCCGGGTGTGAGCTGCCTGAAAATGCACTCGGATGCCGCCGCTGTCAATATCAGTTTTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507741.5
CDS GCA 72 bp CTCTCTCTCGCTCCTGCTTTCGCCATGTGGTGTGCCTaGTCTCCATTCACCTTCCTCCACGATTGTAAGACT +
Preference number: 6 (lower is better)
Translates to: LSLAPAFAMWCA*SPFTFLHDCKT
Trigger: AGTCTTACAATCGTGGAGGAAGGTGAATGGAGAGCAGGCACACCACATGGCGAAAGCAGGAGCGAGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506673.5
CDS CCA 72 bp AAATCCTTTCTCTCTCTCGCTCCTGCTTTCGCCATGTaGTGTGCCTGCTCTCCATTCACCTTCCTCCACGAT +
Preference number: 6 (lower is better)
Translates to: KSFLSLAPAFAM*CACSPFTFLHD
Trigger: ATCGTGGAGGAAGGTGAATGGAGAGCAGGCACACCACATGGCGAAAGCAGGAGCGAGAGAGAGAAAGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506673.5
CDS GCA 72 bp AGAGTTCAGCTGAAAATCCTTTCTCTCTCTCGCTCCTaGTTTCGCCATGTGGTGTGCCTGCTCTCCATTCAC +
Preference number: 6 (lower is better)
Translates to: RVQLKILSLSRS*FRHVVCLLSIH
Trigger: GTGAATGGAGAGCAGGCACACCACATGGCGAAAGCAGGAGCGAGAGAGAGAAAGGATTTTCAGCTGAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506673.5
CDS TCA 72 bp AATTCTCACCCATGTGAGAATAAACCTCAGCTTGGCTaGTATTCTGGGCGGGCACAGACCATTAAGTACAGG +
Preference number: 6 (lower is better)
Translates to: NSHPCENKPQLG*YSGRAQTIKYR
Trigger: CCTGTACTTAATGGTCTGTGCCCGCCCAGAATATCAGCCAAGCTGAGGTTTATTCTCACATGGGTGAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513800.5
CDS CAA 90 bp TCACAGTTCTATCGAATTCTCACCCATGTGAGAATAAACCTCAGCTaGGCTGATATTCTGGGCGGGCACAGACCATTAAGTACAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SQFYRILTHVRINLS*ADILGGHRPLSTGR
Trigger: TCTTCCTGTACTTAATGGTCTGTGCCCGCCCAGAATATCAGCCAAGCTGAGGTTTATTCTCACATGGGTGAGAATTCGATAGAACTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513800.5
CDS CAA 72 bp TATCGAATTCTCACCCATGTGAGAATAAACCTCAGCTaGGCTGATATTCTGGGCGGGCACAGACCATTAAGT +
Preference number: 6 (lower is better)
Translates to: YRILTHVRINLS*ADILGGHRPLS
Trigger: ACTTAATGGTCTGTGCCCGCCCAGAATATCAGCCAAGCTGAGGTTTATTCTCACATGGGTGAGAATTCGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513800.5
CDS GCA 72 bp AAATCTCCACTGTGTTCTCATATTTATGCAAGGGAATaGTGGAACCCAGTGCTTACACACACTGGATGCCAA +
Preference number: 6 (lower is better)
Translates to: KSPLCSHIYARE*WNPVLTHTGCQ
Trigger: TTGGCATCCAGTGTGTGTAAGCACTGGGTTCCAGCATTCCCTTGCATAAATATGAGAACACAGTGGAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS CCA 72 bp TCTCCACTGTGTTCTCATATTTATGCAAGGGAATGCTaGAACCCAGTGCTTACACACACTGGATGCCAAAAT +
Preference number: 6 (lower is better)
Translates to: SPLCSHIYAREC*NPVLTHTGCQN
Trigger: ATTTTGGCATCCAGTGTGTGTAAGCACTGGGTTCCAGCATTCCCTTGCATAAATATGAGAACACAGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS TCA 72 bp AAGTACAGGAAGATCTCTCCAGCTCTGTGGTTGAAGTaGATGAGTGAGACCTATCATGTCTACTTTTCTTGG +
Preference number: 6 (lower is better)
Translates to: KYRKISPALWLK*MSETYHVYFSW
Trigger: CCAAGAAAAGTAGACATGATAGGTCTCACTCATTCACTTCAACCACAGAGCTGGAGAGATCTTCCTGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513800.5
CDS TCA 72 bp CTTTTTCCTTGGTGGCATCACTTTATTAAAGCAGTCTaGAGAACTGCAAGACCGCAGACTTCCAGCTTATTA +
Preference number: 6 (lower is better)
Translates to: LFPWWHHFIKAV*RTARPQTSSLL
Trigger: TAATAAGCTGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502930.5
ENST00000509376.5
CDS GCA 72 bp GTTCTCATATTTATGCAAGGGAATGCTGGAACCCAGTaGTTACACACACTGGATGCCAAAATTAAATACACC +
Preference number: 6 (lower is better)
Translates to: VLIFMQGNAGTQ*LHTLDAKIKYT
Trigger: GGTGTATTTAATTTTGGCATCCAGTGTGTGTAAGCACTGGGTTCCAGCATTCCCTTGCATAAATATGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504661.1
CDS TCA 72 bp ATTAATACATGTGGAAATTCTGGCCCATTAGTGATATaGCCCACAAAGCCAGAATGGGGAAAGATGGAGAAA +
Preference number: 6 (lower is better)
Translates to: INTCGNSGPLVI*PTKPEWGKMEK
Trigger: TTTCTCCATCTTTCCCCATTCTGGCTTTGTGGGTCATATCACTAATGGGCCAGAATTTCCACATGTATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513800.5