RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCTN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000166847

Ensembl transcript IDs: ENST00000300087.7, ENST00000563188.5, ENST00000566053.5, ENST00000566298.1, ENST00000568272.1, ENST00000568589.5

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGCTGGCCCACCAGCAAAAGCTTCAGGAGAGCAAGGGATTGGCTaGCTGGGCTGCAAGGGTAGTGTTCAAAGCCAGCTGCCTTGGAGG +
Preference number: 1 (lower is better)
Translates to: GAGPPAKASGEQGIG*LGCKGSVQSQLPWR
Trigger: CCTCCAAGGCAGCTGGCTTTGAACACTACCCTTGCAGCCCAGTCAGCCAATCCCTTGCTCTCCTGAAGCTTTTGCTGGTGGGCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 90 bp AGCCCCCAAGCTAGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATaGCTCCAAATGCACGGCGAAGGCTCATGTGCAGCAGGAGGAAAG +
Preference number: 1 (lower is better)
Translates to: SPQARRMQVWSYQLS*LQMHGEGSCAAGGK
Trigger: CTTTCCTCCTGCTGCACATGAGCCTTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCTAGCTTGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 90 bp CTGGCCCACCAGCAAAAGCTTCAGGAGAGCAAGGGATTGGCTGACTaGGCTGCAAGGGTAGTGTTCAAAGCCAGCTGCCTTGGAGGCCAA +
Preference number: 1 (lower is better)
Translates to: LAHQQKLQESKGLAD*AARVVFKASCLGGQ
Trigger: TTGGCCTCCAAGGCAGCTGGCTTTGAACACTACCCTTGCAGCCCAGTCAGCCAATCCCTTGCTCTCCTGAAGCTTTTGCTGGTGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 90 bp CACTTCAGGGTCCAAGTCAGAGTGCACAAGGAAAGCAGGTGGGGCTaGCCCACCAGCAAAAGCTTCAGGAGAGCAAGGGATTGGCTGACT +
Preference number: 1 (lower is better)
Translates to: HFRVQVRVHKESRWG*PTSKSFRRARDWLT
Trigger: AGTCAGCCAATCCCTTGCTCTCCTGAAGCTTTTGCTGGTGGGCCAGCCCCACCTGCTTTCCTTGTGCACTCTGACTTGGACCCTGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp CTAGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATaGACGGCGAAGGCTCATGTGCAGCAGGAGGAAAGGAAGCCAACA +
Preference number: 1 (lower is better)
Translates to: LGGCRSGAISCHGSK*TAKAHVQQEERKPT
Trigger: TGTTGGCTTCCTTTCCTCCTGCTGCACATGAGCCTTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp GCTCATGTGCAGCAGGAGGAAAGGAAGCCAACAAAGAGGCCTGGTTaGGTCTGCTTGTTGTCTCCCAATGGCCATTCTTCCCCCACTCCT +
Preference number: 1 (lower is better)
Translates to: AHVQQEERKPTKRPG*VCLLSPNGHSSPTP
Trigger: AGGAGTGGGGGAAGAATGGCCATTGGGAGACAACAAGCAGACTCAACCAGGCCTCTTTGTTGGCTTCCTTTCCTCCTGCTGCACATGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp TGGAAGGGAAGAAACCTTTCATTCAGAGCCCCCAAGCTAGGAGGATaGAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCG +
Preference number: 1 (lower is better)
Translates to: WKGRNLSFRAPKLGG*RSGAISCHGSKCTA
Trigger: CGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCTAGCTTGGGGGCTCTGAATGAAAGGTTTCTTCCCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp TGCCACCACAACCACCAGCACCAACTCTCAGTCTCTGTGGGTACATaGCAGGCCTGTCCATTTGGTGTATTCCATCTTCCTGGCCACAAT +
Preference number: 1 (lower is better)
Translates to: CHHNHQHQLSVSVGT*QACPFGVFHLPGHN
Trigger: ATTGTGGCCAGGAAGATGGAATACACCAAATGGACAGGCCTGGCATGTACCCACAGAGACTGAGAGTTGGTGCTGGTGGTTGTGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp GGGATGCAGCCTGAAGCCCAATCTAGCCCATCCTTTTCAGCTACGTaGGCCATTAAATTCCCTCTGCCCCAAGTGAACTGGAAAGAGTCC +
Preference number: 1 (lower is better)
Translates to: GMQPEAQSSPSFSAT*AIKFPLPQVNWKES
Trigger: GGACTCTTTCCAGTTCACTTGGGGCAGAGGGAATTTAATGGCTCACGTAGCTGAAAAGGATGGGCTAGATTGGGCTTCAGGCTGCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 90 bp CTGCCCAAGTGTTTCCAGTCCCATCTGAAAAGTTCCCAGAGTCCTTaGCTTCCAAGGGACTGCCTGAAGGCAGTGAGTCCCAAACAGTTT +
Preference number: 1 (lower is better)
Translates to: LPKCFQSHLKSSQSP*LPRDCLKAVSPKQF
Trigger: AAACTGTTTGGGACTCACTGCCTTCAGGCAGTCCCTTGGAAGCCAAGGACTCTGGGAACTTTTCAGATGGGACTGGAAACACTTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp GCAGCAGTGAAGGCATGCTGCATGGCCAGACAGCTGTGGTCCAAGTaGCATGCAAGGCTGCCTTTTTATCTTGTTGGTCTTAGAGTCCAA +
Preference number: 1 (lower is better)
Translates to: AAVKACCMARQLWSK*HARLPFYLVGLRVQ
Trigger: TTGGACTCTAAGACCAACAAGATAAAAAGGCAGCCTTGCATGTCACTTGGACCACAGCTGTCTGGCCATGCAGCATGCCTTCACTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp CCAAGCTTTCAGATGCCAGCCAAGGGCCAGCCTTGCAAACAGGCCTaGTTTCTCATCTCTTTTCACACAGTCCATCTCCTTATTGAGGCT +
Preference number: 1 (lower is better)
Translates to: PSFQMPAKGQPCKQA*FLISFHTVHLLIEA
Trigger: AGCCTCAATAAGGAGATGGACTGTGTGAAAAGAGATGAGAAAGCAGGCCTGTTTGCAAGGCTGGCCCTTGGCTGGCATCTGAAAGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 90 bp CTTCCTGGCCACAATGATGACTTGAGGCTGGATACCTTCCTCGTCTaGACCAATGAGAACCAAATCCAGCAGTTCTGTCAGCAAAGGGGA +
Preference number: 1 (lower is better)
Translates to: LPGHNDDLRLDTFLV*TNENQIQQFCQQRG
Trigger: TCCCCTTTGCTGACAGAACTGCTGGATTTGGTTCTCATTGGTCCAGACGAGGAAGGTATCCAGCCTCAAGTCATCATTGTGGCCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 90 bp GTCAGTCTGAACTCAAAGCACTCACAGCACATGGAAAGGCAGCACTaGGAATTTTCCTTCAGCAAGAGGAGGCTTCCAGGGATCAAGCCT +
Preference number: 1 (lower is better)
Translates to: VSLNSKHSQHMERQH*EFSFSKRRLPGIKP
Trigger: AGGCTTGATCCCTGGAAGCCTCCTCTTGCTGAAGGAAAATTCCCAGTGCTGCCTTTCCATGTGCTGTGAGTGCTTTGAGTTCAGACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp TCTGGTCTGTCAAAAGCAGGAGGAGAGGTCATAGTCCTTGCGATGTaGCCTTCCCCAGCTTGGAGCGTTTGGCAAATATTAGAAGTTAGG +
Preference number: 1 (lower is better)
Translates to: SGLSKAGGEVIVLAM*PSPAWSVWQILEVR
Trigger: CCTAACTTCTAATATTTGCCAAACGCTCCAAGCTGGGGAAGGGCACATCGCAAGGACTATGACCTCTCCTCCTGCTTTTGACAGACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp CAGTCCCATCTGAAAAGTTCCCAGAGTCCTTGGCTTCCAAGGGACTaGCTGAAGGCAGTGAGTCCCAAACAGTTTTGCTTGTTCAGGATA +
Preference number: 1 (lower is better)
Translates to: QSHLKSSQSPWLPRD*LKAVSPKQFCLFRI
Trigger: TATCCTGAACAAGCAAAACTGTTTGGGACTCACTGCCTTCAGGCAGTCCCTTGGAAGCCAAGGACTCTGGGAACTTTTCAGATGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp GCACAGTCCCAGGGGCACAGGTGGTACCCCTGTAAACAAAGAATTTaGAATATTAGGGCACCTCAAGCAGGACATCCATTAGGCTGTACA +
Preference number: 1 (lower is better)
Translates to: AQSQGHRWYPCKQRI*NIRAPQAGHPLGCT
Trigger: TGTACAGCCTAATGGATGTCCTGCTTGAGGTGCCCTAATATTGCAAATTCTTTGTTTACAGGGGTACCACCTGTGCCCCTGGGACTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 90 bp GAAGCCAACAAAGAGGCCTGGTTGAGTCTGCTTGTTGTCTCCCAATaGCCATTCTTCCCCCACTCCTTTTTACTAGCAGAATCTCCTTCC +
Preference number: 1 (lower is better)
Translates to: EANKEAWLSLLVVSQ*PFFPHSFLLAESPS
Trigger: GGAAGGAGATTCTGCTAGTAAAAAGGAGTGGGGGAAGAATGGCCATTGGGAGACAACAAGCAGACTCAACCAGGCCTCTTTGTTGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 90 bp CCAACTACACCCACCTGCACACTTGCCTCTTGGGCCTTGTTTGTCTaGCAAGTCCTAAATCCCAGACTCATTTGTTCACTTGCTTGCTTC +
Preference number: 1 (lower is better)
Translates to: PTTPTCTLASWALFV*QVLNPRLICSLACF
Trigger: GAAGCAAGCAAGTGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAGTGTGCAGGTGGGTGTAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp GCCAGGCAATTAGGATCTGAGAATTTGAGATTCTCAACAAGCAGCTaGTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACAG +
Preference number: 1 (lower is better)
Translates to: ARQLGSENLRFSTSS*FSSAAVKACCMARQ
Trigger: CTGTCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGAGAATCTCAAATTCTCAGATCCTAATTGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp GGGAAGCTCATTACAGACTCAGTGTTCAGGGTTCTCATTGGGAGCTaGTCACCTCATCCTCTGCCTAACACATATGAAAATCTGACTCCC +
Preference number: 1 (lower is better)
Translates to: GKLITDSVFRVLIGS*SPHPLPNTYENLTP
Trigger: GGGAGTCAGATTTTCATATGTGTTAGGCAGAGGATGAGGTGAGCAGCTCCCAATGAGAACCCTGAACACTGAGTCTGTAATGAGCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp CAGTTGCTTTTGAAAAAGAATCAGACGCTCTGGAAAGCTGATTGTTaGCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGC +
Preference number: 1 (lower is better)
Translates to: QLLLKKNQTLWKADC*HVGLYSHTVTTSLG
Trigger: GCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACAATCAGCTTTCCAGAGCGTCTGATTCTTTTTCAAAAGCAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568272.1
3UTR GCA 90 bp GGACAGCTACGTTTTAATAATCCACCTACCTTACTAAGCTGTGTGTaGTGGGAGAAAAGTGAGGGAAGTAGAGTCAGGCTGTCAGTCCAC +
Preference number: 1 (lower is better)
Translates to: GQLRFNNPPTLLSCV*WEKSEGSRVRLSVH
Trigger: GTGGACTGACAGCCTGACTCTACTTCCCTCACTTTTCTCCCAGCACACACAGCTTAGTAAGGTAGGTGGATTATTAAAACGTAGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp ATCTTCATGGAAAGCATAGAAGCTAGACCCACTCTGTTGTCAGTCTaGACTCAAAGCACTCACAGCACATGGAAAGGCAGCACTGGGAAT +
Preference number: 1 (lower is better)
Translates to: IFMESIEARPTLLSV*TQSTHSTWKGSTGN
Trigger: ATTCCCAGTGCTGCCTTTCCATGTGCTGTGAGTGCTTTGAGTTCAGACTGACAACAGAGTGGGTCTAGCTTCTATGCTTTCCATGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp TTGGGAGCTGCTCACCTCATCCTCTGCCTAACACATATGAAAATCTaGCTCCCAGAAGGAAAGCAGATGTTGGGCATAACCCACATTGTT +
Preference number: 1 (lower is better)
Translates to: LGAAHLILCLTHMKI*LPEGKQMLGITHIV
Trigger: AACAATGTGGGTTATGCCCAACATCTGCTTTCCTTCTGGGAGTCAGATTTTCATATGTGTTAGGCAGAGGATGAGGTGAGCAGCTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp CTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCACTTaGTTGCTTCCTCCCTCCCTCCCTACCAAAACACAGTATGATCTG +
Preference number: 1 (lower is better)
Translates to: LVCLASPKSQTHLFT*LLPPSLPTKTQYDL
Trigger: CAGATCATACTGTGTTTTGGTAGGGAGGGAGGGAGGAAGCAAGCAAGTGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp TCCCAGCAGAGTCACATAGGACACAATTCCTCCAGCAATCAGTTGTaGCAACCCATGTGCAATGTTGTATACAAGGGAAGCTCATTACAG +
Preference number: 1 (lower is better)
Translates to: SQQSHIGHNSSSNQL*QPMCNVVYKGSSLQ
Trigger: CTGTAATGAGCTTCCCTTGTATACAACATTGCACATGGGTTGTCACAACTGATTGCTGGAGGAATTGTGTCCTATGTGACTCTGCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp TCTAAAGCTGTCGACACCTTGTCCTGGACTTTCAGCCTCCAGAACTaGAGGAAAATAAGTTTCTATTGTGTAAGTCACTCAGTTTGTGGT +
Preference number: 1 (lower is better)
Translates to: SKAVDTLSWTFSLQN*RKISFYCVSHSVCG
Trigger: ACCACAAACTGAGTGACTTACACAATAGAAACTTATTTTCCTGCAGTTCTGGAGGCTGAAAGTCCAGGACAAGGTGTCGACAGCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp TTTTGCTTGTTCAGGATACAAGTTGATCCATCTCATGAGCATGGATaGCATTTGTGGGAGATCTTCATGGAAAGCATAGAAGCTAGACCC +
Preference number: 1 (lower is better)
Translates to: FCLFRIQVDPSHEHG*HLWEIFMESIEARP
Trigger: GGGTCTAGCTTCTATGCTTTCCATGAAGATCTCCCACAAATGTCATCCATGCTCATGAGATGGATCAACTTGTATCCTGAACAAGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 90 bp AAATGGAAGCAAGCACATATTCTACTAAAAGCACAAGCCCATTGCTaGGGGGCTCTAGAAGTGTTTCAGTTATCATGTACTTATGGGAAC +
Preference number: 1 (lower is better)
Translates to: KWKQAHILLKAQAHC*GALEVFQLSCTYGN
Trigger: GTTCCCATAAGTACATGATAACTGAAACACTTCTAGAGCCCCCCAGCAATGGGCTTGTGCTTTTAGTAGAATATGTGCTTGCTTCCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp AGCATTTACTATGTGCCAGGCACAAGGCTAAGAGTTTTACAGAGATaGTCTCATTTACCTTGGGTTACTTACCCAACCAAGGTTTATAGC +
Preference number: 1 (lower is better)
Translates to: SIYYVPGTRLRVLQR*SHLPWVTYPTKVYS
Trigger: GCTATAAACCTTGGTTGGGTAAGTAACCCAAGGTAAATGAGATCATCTCTGTAAAACTCTTAGCCTTGTGCCTGGCACATAGTAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp ACAGGCCTGCTTTCTCATCTCTTTTCACACAGTCCATCTCCTTATTaGGGCTTCTTTACAGCAAAATTATTATTAGTAGGACCACATGCA +
Preference number: 1 (lower is better)
Translates to: TGLLSHLFSHSPSPY*GFFTAKLLLVGPHA
Trigger: TGCATGTGGTCCTACTAATAATAATTTTGCTGTAAAGAAGCCTCAATAAGGAGATGGACTGTGTGAAAAGAGATGAGAAAGCAGGCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp TTATTGAGGCTTCTTTACAGCAAAATTATTATTAGTAGGACCACATaGAAAAGGGTGAGACCAACCTCAAATATGGACCTCAGTTCTTCC +
Preference number: 1 (lower is better)
Translates to: LLRLLYSKIIISRTT*KRVRPTSNMDLSSS
Trigger: GGAAGAACTGAGGTCCATATTTGAGGTTGGTCTCACCCTTTTGCATGTGGTCCTACTAATAATAATTTTGCTGTAAAGAAGCCTCAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp CAAATAGTACAGGCACATGGTTTTGACAGTTGTTTCTGTTATTATTaGAATAAAAAGAACCTATACCTGTTCCCAGGAAGCTCAGAGTCT +
Preference number: 1 (lower is better)
Translates to: QIVQAHGFDSCFCYY*NKKNLYLFPGSSES
Trigger: AGACTCTGAGCTTCCTGGGAACAGGTATAGGTTCTTTTTATTTCAATAATAACAGAAACAACTGTCAAAACCATGTGCCTGTACTATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 90 bp AAAATTCATGCTGAAGCCCTAACCATCTACCTGTACCTCAAAATGTaGGTATATTTGAAGATAGGCCCTGAAGAGGTAACTAAGTTAAAA +
Preference number: 1 (lower is better)
Translates to: KIHAEALTIYLYLKM*VYLKIGPEEVTKLK
Trigger: TTTTAACTTAGTTACCTCTTCAGGGCCTATCTTCAAATATACTCACATTTTGAGGTACAGGTAGATGGTTAGGGCTTCAGCATGAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 90 bp TTGAGTGCTCACCCTGAGCCAGTACTTATGCTTTACATGTATAAATaGATTTCAATCATCATAATACCCTATCCAACTTCCCCATTTTAT +
Preference number: 1 (lower is better)
Translates to: LSAHPEPVLMLYMYK*ISIIIIPYPTSPFY
Trigger: ATAAAATGGGGAAGTTGGATAGGGTATTATGATGATTGAAATGCATTTATACATGTAAAGCATAAGTACTGGCTCAGGGTGAGCACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp CAGGTGGGGCTGGCCCACCAGCAAAAGCTTCAGGAGAGCAAGGGATaGGCTGACTGGGCTGCAAGGGTAGTGTTCAAAGCCAGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: QVGLAHQQKLQESKG*ADWAARVVFKASCL
Trigger: AAGGCAGCTGGCTTTGAACACTACCCTTGCAGCCCAGTCAGCCAATCCCTTGCTCTCCTGAAGCTTTTGCTGGTGGGCCAGCCCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGCAAGCTCCGCCCCCTaGGTTCGCGCCATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARASSAP*VRAILL
Trigger: CAGGAGAATGGCGCGAACCCAGGGGGCGGAGCTTGC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACCACAGACTCAGGCCTaGCTCCTCAGGAGCTCACAG +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARPQTQA*LLRSSQ
Trigger: CTGTGAGCTCCTGAGGAGTCAGGCCTGAGTCTGTGG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGAGAGGCGCTCAGCATaGGCAGTGAATGGCCGTGAG +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARERRSA*AVNGRE
Trigger: CTCACGGCCATTCACTGCCCATGCTGAGCGCCTCTC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACCAACTACACCCACCTaGACACTTGCCTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARPTTPT*TLASWA
Trigger: GGCCCAAGAGGCAAGTGTGCAGGTGGGTGTAGTTGG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp CCTGCCCAAGTGTTTCCAGTCCCATCTGAAAAGTTCCCAGAGTCCTaGGCTTCCAAGGGACTGCCTGAAGGCAGTGAGTCCCAAACAGTT +
Preference number: 2 (lower is better)
Translates to: PAQVFPVPSEKFPES*ASKGLPEGSESQTV
Trigger: AACTGTTTGGGACTCACTGCCTTCAGGCAGTCCCTTGGAAGCCAAGGACTCTGGGAACTTTTCAGATGGGACTGGAAACACTTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATCTCCCAGACTCCTCTaGCCCTACTCTTCCTCAGGT +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARSPRLL*PYSSSG
Trigger: ACCTGAGGAAGAGTAGGGTCAGAGGAGTCTGGGAGA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp CCAACTCTGCTGACTCCCAACTACACCCACCTGCACACTTGCCTCTaGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTG +
Preference number: 2 (lower is better)
Translates to: PTLLTPNYTHLHTCL*GLVCLASPKSQTHL
Trigger: CAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAGTGTGCAGGTGGGTGTAGTTGGGAGTCAGCAGAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTCTGTGCAGCATATGGTaGGGGGCCCACCTTCTTACC +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICLCSIW*GAHLLT
Trigger: GGTAAGAAGGTGGGCCCCTCACCATATGCTGCACAG...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGAGCAAGGGATTGGCTaGCTGGGCTGCAAGGGTAGT +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICEQGIG*LGCKGS
Trigger: ACTACCCTTGCAGCCCAGTCAGCCAATCCCTTGCTC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTCGGCGAAGGCTCATGTaGAGCAGGAGGAAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICRRRLM*SRRKGS
Trigger: GCTTCCTTTCCTCCTGCTGCACATGAGCCTTCGCCG...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGCTGATGCTTTGTCCTaGCCAGCACCCATTCGTCCC +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICADALS*PAPIRP
Trigger: GGGACGAATGGGTGCTGGGCAGGACAAAGCATCAGC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGGCGCCTCGGTAAGGTaGTATGGGAACCATAAGGAT +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARGASVR*YGNHKD
Trigger: ATCCTTATGGTTCCCATAGCACCTTACCGAGGCGCC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAAAGGATGCAGTTCCATaGCCCAGTCAGCTCATCTGG +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARKDAVP*PSQLIW
Trigger: CCAGATGAGCTGACTGGGCCATGGAACTGCATCCTT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp GGGTTACTTACCCAACCAAGGTTTATAGCCAGCAGGTGGCAAAGCTaGAATTCCAACCCAACTCTGCTGACTCCCAACTACACCCACCTG +
Preference number: 2 (lower is better)
Translates to: GLLTQPRFIASRWQS*NSNPTLLTPNYTHL
Trigger: CAGGTGGGTGTAGTTGGGAGTCAGCAGAGTTGGGTTGGAATTCAAGCTTTGCCACCTGCTGGCTATAAACCTTGGTTGGGTAAGTAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp ACCCTCCTGAAATCCAAGCTTTCAGATGCCAGCCAAGGGCCAGCCTaGCAAACAGGCCTGCTTTCTCATCTCTTTTCACACAGTCCATCT +
Preference number: 2 (lower is better)
Translates to: TLLKSKLSDASQGPA*QTGLLSHLFSHSPS
Trigger: AGATGGACTGTGTGAAAAGAGATGAGAAAGCAGGCCTGTTTGCAAGGCTGGCCCTTGGCTGGCATCTGAAAGCTTGGATTTCAGGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATGTGGCCTCAGATCCTaGGTGAAATGGTTCATGCAG +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARCGLRS*VKWFMQ
Trigger: CTGCATGAACCATTTCACTCAGGATCTGAGGCCACA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACCAGCCAGCTGGATTTaGCTACCTATAGTCACCATC +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARPASWI*LPIVTI
Trigger: GATGGTGACTATAGGTAGTCAAATCCAGCTGGCTGG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAACGCTGTCCCAACACTaGCAGTATCATTTCAGGGGA +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARTLSQH*QYHFRG
Trigger: TCCCCTGAAATGATACTGGCAGTGTTGGGACAGCGT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCACCAGGACCTAGGAAGTaGTTGGCACCTAGTAGTGGC +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSPGPRK*LAPSSG
Trigger: GCCACTACTAGGTGCCAAGCACTTCCTAGGTCCTGG...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACTAACTGTGGCCACATaGCAAGACAGTAGGAACCTG +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARLTVAT*QDSRNL
Trigger: CAGGTTCCTACTGTCTTGCCATGTGGCCACAGTTAG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACACAAGGAAAGCAGGTaGGGCTGGCCCACCAGCAAA +
Preference number: 2 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSHKESR*GWPTSK
Trigger: TTTGCTGGTGGGCCAGCCCCACCTGCTTTCCTTGTG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp TGCAGCTCCATGGAAGCTAACCCCCAGGAGACCAGCCAGCTGGATTaGACTACCTATAGTCACCATCCAGGTTGTCAGATGCCAATTTTT +
Preference number: 2 (lower is better)
Translates to: CSSMEANPQETSQLD*TTYSHHPGCQMPIF
Trigger: AAAAATTGGCATCTGACAACCTGGATGGTGACTATAGGTAGTCAAATCCAGCTGGCTGGTCTCCTGGGGGTTAGCTTCCATGGAGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGCCACAATGATGACTTaGGGCTGGATACCTTCCTCG +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSATMMT*GWIPSS
Trigger: CGAGGAAGGTATCCAGCCTCAAGTCATCATTGTGGC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAACACCGGAAGGGTGCTaGTGCTCTGCAGGTCCGTTT +
Preference number: 2 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIITPEGC*CSAGPF
Trigger: AAACGGACCTGCAGAGCAGCAGCACCCTTCCGGTGT...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGTCTCTGTGGGTACATaGCAGGCCTGTCCATTTGGT +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSVSVGT*QACPFG
Trigger: ACCAAATGGACAGGCCTGGCATGTACCCACAGAGAC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGCACAAGCCCATTGCTaGGGGGCTCTAGAAGTGTTT +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSAQAHC*GALEVF
Trigger: AAACACTTCTAGAGCCCCCCAGCAATGGGCTTGTGC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTAAGGGATTGGCTGACTaGGCTGCAAGGGTAGTGTTC +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICKGLAD*AARVVF
Trigger: GAACACTACCCTTGCAGCCCAGTCAGCCAATCCCTT...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCATGGCACAGGTCAGTATaGCCAAGAAACACCATGGGC +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSWHRSV*PRNTMG
Trigger: GCCCATGGTGTTTCTTGGCCATACTGACCTGTGCCA...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp GCCTGTCCATTTGGTGTATTCCATCTTCCTGGCCACAATGATGACTaGAGGCTGGATACCTTCCTCGTCTGGACCAATGAGAACCAAATC +
Preference number: 2 (lower is better)
Translates to: ACPFGVFHLPGHNDD*RLDTFLVWTNENQI
Trigger: GATTTGGTTCTCATTGGTCCAGACGAGGAAGGTATCCAGCCTCAAGTCATCATTGTGGCCAGGAAGATGGAATACACCAAATGGACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACATGGCCACAGTGACTaGTCCAAGAGGACATGGAAC +
Preference number: 2 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSHGHSD*SKRTWN
Trigger: GTTCCATGTCCTCTTGGATCAGTCACTGTGGCCATG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAATTGAGTGCTCACCCTaGGCCAGTACTTATGCTTTA +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARIECSP*ASTYAL
Trigger: TAAAGCATAAGTACTGGCTCAGGGTGAGCACTCAAT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATGTCATGGCTCCAAATaGACGGCGAAGGCTCATGTG +
Preference number: 2 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSCHGSK*TAKAHV
Trigger: CACATGAGCCTTCGCCGTGCATTTGGAGCCATGACA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAACCACAAGGGCTCTGTaGAGCCATGTAAAACAGAAT +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARTTRAL*SHVKQN
Trigger: ATTCTGTTTTACATGGCTGCACAGAGCCCTTGTGGT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGTGTTCAAAGCCAGCTaGCTTGGAGGCCAAGATAGT +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSVFKAS*LGGQDS
Trigger: ACTATCTTGGCCTCCAAGGCAGCTGGCTTTGAACAC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGACCCATTTGCCCAATaGCCAATGGATGTGAAGATA +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARDPFAQ*PMDVKI
Trigger: TATCTTCACATCCATTGGGCATTGGGCAAATGGGTC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAAGCTATCAGCTGTCATaGCTCCAAATGCACGGCGAA +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSSYQLS*LQMHGE
Trigger: TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGATACCTTCCTCGTCTaGACCAATGAGAACCAAATC +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARDTFLV*TNENQI
Trigger: GATTTGGTTCTCATTGGTCCAGACGAGGAAGGTATC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAAGTAAGAGCTGGCCTTaGTTCCAGCTCAGCCATTTA +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSSKSWP*FQLSHL
Trigger: TAAATGGCTGAGCTGGAATCAAGGCCAGCTCTTACT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCACAACACCAACTGAGATaGATGCAGCTGAAATGGCAC +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSQHQLR*MQLKWH
Trigger: GTGCCATTTCAGCTGCATTCATCTCAGTTGGTGTTG...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp CTTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGCAATCTGTGCTGCGTTaGCCACACAATCTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: LSTHIGAQSHSSSQHEHRQSVLR*PHNLPQ
Trigger: TTGAGGAAGATTGTGTGGTCAACGCAGCACAGATTG...CCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563188.5
3UTR-3UTR GCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGGTAATATCATCTaGCACCACAACCACCAGCAC +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICSGNII*HHNHQH
Trigger: GTGCTGGTGGTTGTGGTGGCAGATGATATTACCTGA...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTTCACCTTTGTTCCCTaGAGCAGGTATCCTGCAATC +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICFTFVP*SRYPAI
Trigger: GATTGCAGGATACCTGCTGCAGGGAACAAAGGTGAA...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAAAGACAGTAGGAACCTaGGTGCCTGATGACATCATG +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSKTVGT*VPDDIM
Trigger: CATGATGTCATCAGGCACCCAGGTTCCTACTGTCTT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATACTTGTTGTCTCCCAATaGCCATTCTTCCCCCACTCC +
Preference number: 2 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIILVVSQ*PFFPHS
Trigger: GGAGTGGGGGAAGAATGGCCATTGGGAGACAACAAG...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAAGACAGATCCCTGTTTaGAGTCCTGGGATGCAGCCT +
Preference number: 2 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIRQIPV*SPGMQP
Trigger: AGGCTGCATCCCAGGACTCCAAACAGGGATCTGTCT...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATCCATCTCTTGTTTGTaGCGGACTGATTATAAAGGG +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARSISCL*RTDYKG
Trigger: CCCTTTATAATCAGTCCGCCACAAACAAGAGATGGA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGGCCAAGAAACACCATaGGCTAATGTTCAGACCCAT +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICGQETP*ANVQTH
Trigger: ATGGGTCTGAACATTAGCCCATGGTGTTTCTTGGCC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGGCCTTTTCAGTTCCTaGGGCTCTCATATTTCCTCA +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSGLFSS*GSHISS
Trigger: TGAGGAAATATGAGAGCCCCAGGAACTGAAAAGGCC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTGCCAGATGTATCAGTaGCTAAGAAAGGAACTGTGG +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICCQMYQ*LRKELW
Trigger: CCACAGTTCCTTTCTTAGTCACTGATACATCTGGCA...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACAAAACAAGGAAGGGTaGTTTCTCCATCTCTTGTTT +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARQNKEG*FLHLLF
Trigger: AAACAAGAGATGGAGAAATCACCCTTCCTTGTTTTG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATATTTGGAGTCCTGGGATaGAGCCTGAAGCCCAATCTA +
Preference number: 2 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIFGVLG*SLKPNL
Trigger: TAGATTGGGCTTCAGGCTGCATCCCAGGACTCCAAA...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTCTAAGAAAGGAACTGTaGCCTCAGATCCTGAGTGAA +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICLRKEL*PQILSE
Trigger: TTCACTCAGGATCTGAGGCCACAGTTCCTTTCTTAG...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAAGTTACAGCCTGTTCTaGTTCCAATATCCGAAGAAT +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARSYSLF*FQYPKN
Trigger: ATTCTTCGGATATTGGAACCAGAACAGGCTGTAACT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp AGGTTTCAGCTTAGAGTCAGGGCCAGGCAATTAGGATCTGAGAATTaGAGATTCTCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: RFQLRVRARQLGSEN*RFSTSSCFSSAAVK
Trigger: CTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGAGAATCTCAAATTCTCAGATCCTAATTGCCTGGCCCTGACTCTAAGCTGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp CTGACTCCCAGAAGGAAAGCAGATGTTGGGCATAACCCACATTGTTaGTACGAACAGTTTAGGCACAGTGAGCCACTCTTATCATTTAGG +
Preference number: 2 (lower is better)
Translates to: LTPRRKADVGHNPHC*YEQFRHSEPLLSFR
Trigger: CCTAAATGATAAGAGTGGCTCACTGTGCCTAAACTGTTCGTACAAACAATGTGGGTTATGCCCAACATCTGCTTTCCTTCTGGGAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp GTATACAAGGGAAGCTCATTACAGACTCAGTGTTCAGGGTTCTCATaGGGAGCTGCTCACCTCATCCTCTGCCTAACACATATGAAAATC +
Preference number: 2 (lower is better)
Translates to: VYKGSSLQTQCSGFS*GAAHLILCLTHMKI
Trigger: GATTTTCATATGTGTTAGGCAGAGGATGAGGTGAGCAGCTCCCAATGAGAACCCTGAACACTGAGTCTGTAATGAGCTTCCCTTGTATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATCCTTTTCAGCTACGTaGGCCATTAAATTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSSFSAT*AIKFPL
Trigger: CAGAGGGAATTTAATGGCTCACGTAGCTGAAAAGGA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATGGTTCATGCAGAAGTaGCTAATACAGAAGCCACCA +
Preference number: 2 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSWFMQK*LIQKPP
Trigger: TGGTGGCTTCTGTATTAGTCACTTCTGCATGAACCA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAAACGAGGAAATGTTGTaGTATTTGGCCAGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSNEEML*YLARRR
Trigger: TCTCCTTCTGGCCAAATAGCACAACATTTCCTCGTT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATACCAGCTGACTATCACTaGACTGTTATGGGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIPADYH*TVMGER
Trigger: TCTCTCTCCCATAACAGTGCAGTGATAGTCAGCTGG...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAACTGGATTAATCATGTaGCCAAACATGCATGGCCAC +
Preference number: 2 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSTGLIM*PNMHGH
Trigger: GTGGCCATGCATGTTTGGCCACATGATTAATCCAGT...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATTAGATGTGTGGCATTaGGCAAATTTACTTAACCTC +
Preference number: 2 (lower is better)
Translates to: STSSCFSSAAVKACCMARLDVWH*ANLLNL
Trigger: GAGGTTAAGTAAATTTGCCCAATGCCACACATCTAA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp GCCACAGTGACTGATCCAAGAGGACATGGAACTCACAACAAACCATaGAGAACTTTGGGAGTTTCCAAATTCGAACTGGAAGGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: ATVTDPRGHGTHNKP*RTLGVSKFELEGKK
Trigger: TTTCTTCCCTTCCAGTTCGAATTTGGAAACTCCCAAAGTTCTCAATGGTTTGTTGTGAGTTCCATGTCCTCTTGGATCAGTCACTGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp AAACAGAATCAGTCAACAGGAGGCTCACAAGACAATCATTCACCTTaGTTCCCTGCAGCAGGTATCCTGCAATCTGAGACTTATCTTGAG +
Preference number: 2 (lower is better)
Translates to: KQNQSTGGSQDNHSP*FPAAGILQSETYLE
Trigger: CTCAAGATAAGTCTCAGATTGCAGGATACCTGCTGCAGGGAACAAAGGTGAATGATTGTCTTGTGAGCCTCCTGTTGACTGATTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAACAGGCACATGGTTTTaGCAGTTGTTTCTGTTATTA +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSTGTWF*QLFLLL
Trigger: TAATAACAGAAACAACTGTCAAAACCATGTGCCTGT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAAATATCAGTTTCCTCTaGTGTAAAACAGGCTGTGAA +
Preference number: 2 (lower is better)
Translates to: ASWALFVWQVLNPRLICSNISFL*CKTGCE
Trigger: TTCACAGCCTGTTTTACAGCAGAGGAAACTGATATT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTCTTCTTACCCCTAAATaGAAGCAAGCACATATTCTA +
Preference number: 2 (lower is better)
Translates to: LASWALFVWQVLNPRLICLLTPK*KQAHIL
Trigger: TAGAATATGTGCTTGCTTCCATTTAGGGGTAAGAAG...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp ACTGATCCAAGAGGACATGGAACTCACAACAAACCATTGAGAACTTaGGGAGTTTCCAAATTCGAACTGGAAGGGAAGAAACCTTTCATT +
Preference number: 2 (lower is better)
Translates to: TDPRGHGTHNKPLRT*GVSKFELEGKKPFI
Trigger: AATGAAAGGTTTCTTCCCTTCCAGTTCGAATTTGGAAACTCCCAAAGTTCTCAATGGTTTGTTGTGAGTTCCATGTCCTCTTGGATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR GCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACTGAGCCAGTACTTATaGTTTACATGTATAAATGCA +
Preference number: 2 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSLSQYL*FTCINA
Trigger: TGCATTTATACATGTAAAGCATAAGTACTGGCTCAG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 90 bp AACAGGCCTGCTTTCTCATCTCTTTTCACACAGTCCATCTCCTTATaGAGGCTTCTTTACAGCAAAATTATTATTAGTAGGACCACATGC +
Preference number: 2 (lower is better)
Translates to: NRPAFSSLFTQSISL*RLLYSKIIISRTTC
Trigger: GCATGTGGTCCTACTAATAATAATTTTGCTGTAAAGAAGCCTCAATAAGGAGATGGACTGTGTGAAAAGAGATGAGAAAGCAGGCCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAATCATGGACCAGCCCCTaGCCTGGCCTGGACCAGCTG +
Preference number: 3 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGESWTSP*PGLDQL
Trigger: CAGCTGGTCCAGGCCAGGCAAGGGGCTGGTCCATGA...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp GACAAACACCCTGCAAGTCTCCCTTGTGCCCTGTGCTaGGGGGTGCCAACACCACCACCTCCTAGTCTGATG +
Preference number: 3 (lower is better)
Translates to: DKHPASLPCALC*GVPTPPPPSLM
Trigger: CATCAGACTAGGAGGTGGTGGTGTTGGCACCCCCCAGCACAGGGCACAAGGGAGACTTGCAGGGTGTTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp GGCACCTCAAGCAGGACATCCATTAGGCTGTACAGGTaGACAGACCTCCTACCAGGGGAACTCCTGCCCAAG +
Preference number: 3 (lower is better)
Translates to: GTSSRTSIRLYR*TDLLPGELLPK
Trigger: CTTGGGCAGGAGTTCCCCTGGTAGGAGGTCTGTTCACCTGTACAGCCTAATGGATGTCCTGCTTGAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp TGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATaGACGGCGAAGGCTCATGTGCAGCAGGAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: CRSGAISCHGSK*TAKAHVQQEER
Trigger: CCTTTCCTCCTGCTGCACATGAGCCTTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp TGGGTGCCTGATGACATCATGGACCAGCCCCTTGCCTaGCCTGGACCAGCTGACTATCACTGCACTGTTATG +
Preference number: 3 (lower is better)
Translates to: WVPDDIMDQPLA*PGPADYHCTVM
Trigger: CATAACAGTGCAGTGATAGTCAGCTGGTCCAGGCCAGGCAAGGGGCTGGTCCATGATGTCATCAGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp GCTAGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATaGCTCCAAATGCACGGCGAAGGCTCATGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: ARRMQVWSYQLS*LQMHGEGSCAA
Trigger: TGCTGCACATGAGCCTTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp TTCAGGGTCCAAGTCAGAGTGCACAAGGAAAGCAGGTaGGGCTGGCCCACCAGCAAAAGCTTCAGGAGAGCA +
Preference number: 3 (lower is better)
Translates to: FRVQVRVHKESR*GWPTSKSFRRA
Trigger: TGCTCTCCTGAAGCTTTTGCTGGTGGGCCAGCCCCACCTGCTTTCCTTGTGCACTCTGACTTGGACCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp TGGTCTGTCAAAAGCAGGAGGAGAGGTCATAGTCCTTaGGATGTGCCCTTCCCCAGCTTGGAGCGTTTGGCA +
Preference number: 3 (lower is better)
Translates to: WSVKSRRRGHSP*DVPFPSLERLA
Trigger: TGCCAAACGCTCCAAGCTGGGGAAGGGCACATCGCAAGGACTATGACCTCTCCTCCTGCTTTTGACAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp TTCATTCAGAGCCCCCAAGCTAGGAGGATGCAGGTCTaGAGCTATCAGCTGTCATGGCTCCAAATGCACGGC +
Preference number: 3 (lower is better)
Translates to: FIQSPQARRMQV*SYQLSWLQMHG
Trigger: GCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCTAGCTTGGGGGCTCTGAATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp CAGGGGAACTCCTGCCCAAGTGTTTCCAGTCCCATCTaGAAAGTTCCCAGAGTCCTTGGCTTCCAAGGGACT +
Preference number: 3 (lower is better)
Translates to: QGNSCPSVSSPI*KVPRVLGFQGT
Trigger: AGTCCCTTGGAAGCCAAGGACTCTGGGAACTTTTCAGATGGGACTGGAAACACTTGGGCAGGAGTTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp CAGCAAAAGCTTCAGGAGAGCAAGGGATTGGCTGACTaGGCTGCAAGGGTAGTGTTCAAAGCCAGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: QQKLQESKGLAD*AARVVFKASCL
Trigger: AAGGCAGCTGGCTTTGAACACTACCCTTGCAGCCCAGTCAGCCAATCCCTTGCTCTCCTGAAGCTTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp TGTTTCCAGTCCCATCTGAAAAGTTCCCAGAGTCCTTaGCTTCCAAGGGACTGCCTGAAGGCAGTGAGTCCC +
Preference number: 3 (lower is better)
Translates to: CFQSHLKSSQSP*LPRDCLKAVSP
Trigger: GGGACTCACTGCCTTCAGGCAGTCCCTTGGAAGCCAAGGACTCTGGGAACTTTTCAGATGGGACTGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTCAGGAGAGCAAGGGATaGGCTGACTGGGCTGCAAGG +
Preference number: 3 (lower is better)
Translates to: LASWALFVWQVLNPRLICQESKG*ADWAAR
Trigger: CCTTGCAGCCCAGTCAGCCAATCCCTTGCTCTCCTG...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp TGGAAGCTAACCCCCAGGAGACCAGCCAGCTGGATTTaGCTACCTATAGTCACCATCCAGGTTGTCAGATGC +
Preference number: 3 (lower is better)
Translates to: WKLTPRRPASWI*LPIVTIQVVRC
Trigger: GCATCTGACAACCTGGATGGTGACTATAGGTAGTCAAATCCAGCTGGCTGGTCTCCTGGGGGTTAGCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp GATTCTCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTaGAGGCATGCTGCATGGCCAGACAGCTGTGGTCCA +
Preference number: 3 (lower is better)
Translates to: DSQQAAAFLQQQ*RHAAWPDSCGP
Trigger: TGGACCACAGCTGTCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp AGCCAAAGAGACAGATCCCTGTTTGGAGTCCTGGGATaGAGCCTGAAGCCCAATCTAGCCCATCCTTTTCAG +
Preference number: 3 (lower is better)
Translates to: SQRDRSLFGVLG*SLKPNLAHPFQ
Trigger: CTGAAAAGGATGGGCTAGATTGGGCTTCAGGCTGCATCCCAGGACTCCAAACAGGGATCTGTCTCTTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp CAGATGCCAGCCAAGGGCCAGCCTTGCAAACAGGCCTaGTTTCTCATCTCTTTTCACACAGTCCATCTCCTT +
Preference number: 3 (lower is better)
Translates to: QMPAKGQPCKQA*FLISFHTVHLL
Trigger: AAGGAGATGGACTGTGTGAAAAGAGATGAGAAAGCAGGCCTGTTTGCAAGGCTGGCCCTTGGCTGGCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp AGTAATGAGAACCCTCCTGAAATCCAAGCTTTCAGATaGCAGCCAAGGGCCAGCCTTGCAAACAGGCCTGCT +
Preference number: 3 (lower is better)
Translates to: SNENPPEIQAFR*QPRASLANRPA
Trigger: AGCAGGCCTGTTTGCAAGGCTGGCCCTTGGCTGGCATCTGAAAGCTTGGATTTCAGGAGGGTTCTCATTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp TGTGCAGCAGGAGGAAAGGAAGCCAACAAAGAGGCCTaGTTGAGTCTGCTTGTTGTCTCCCAATGGCCATTC +
Preference number: 3 (lower is better)
Translates to: CAAGGKEANKEA*LSLLVVSQWPF
Trigger: GAATGGCCATTGGGAGACAACAAGCAGACTCAACCAGGCCTCTTTGTTGGCTTCCTTTCCTCCTGCTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGAGACAGATCCCTGTTaGGAGTCCTGGGATGCAGCC +
Preference number: 3 (lower is better)
Translates to: LASWALFVWQVLNPRLICETDPC*ESWDAA
Trigger: GGCTGCATCCCAGGACTCCAAACAGGGATCTGTCTC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACTTGCCTCTTGGGCCTaGTTTGTCTGGCAAGTCCTA +
Preference number: 3 (lower is better)
Translates to: STSSCFSSAAVKACCMARLASWA*FVWQVL
Trigger: TAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCATGGACAGCTGATGCTTaGTCCTGCCCAGCACCCATT +
Preference number: 3 (lower is better)
Translates to: ASWALFVWQVLNPRLICSWTADA*SCPAPI
Trigger: AATGGGTGCTGGGCAGGACAAAGCATCAGCTGTCCA...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp CCTGAAGCCCAATCTAGCCCATCCTTTTCAGCTACGTaGGCCATTAAATTCCCTCTGCCCCAAGTGAACTGG +
Preference number: 3 (lower is better)
Translates to: PEAQSSPSFSAT*AIKFPLPQVNW
Trigger: CCAGTTCACTTGGGGCAGAGGGAATTTAATGGCTCACGTAGCTGAAAAGGATGGGCTAGATTGGGCTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp AGAAACCTTTCATTCAGAGCCCCCAAGCTAGGAGGATaGAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAA +
Preference number: 3 (lower is better)
Translates to: RNLSFRAPKLGG*RSGAISCHGSK
Trigger: TTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCTAGCTTGGGGGCTCTGAATGAAAGGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp CTGAAAAGTTCCCAGAGTCCTTGGCTTCCAAGGGACTaGCTGAAGGCAGTGAGTCCCAAACAGTTTTGCTTG +
Preference number: 3 (lower is better)
Translates to: LKSSQSPWLPRD*LKAVSPKQFCL
Trigger: CAAGCAAAACTGTTTGGGACTCACTGCCTTCAGGCAGTCCCTTGGAAGCCAAGGACTCTGGGAACTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp AACTCAAAGCACTCACAGCACATGGAAAGGCAGCACTaGGAATTTTCCTTCAGCAAGAGGAGGCTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: NSKHSQHMERQH*EFSFSKRRLPG
Trigger: CCCTGGAAGCCTCCTCTTGCTGAAGGAAAATTCCCAGTGCTGCCTTTCCATGTGCTGTGAGTGCTTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGGCCACAATGATGACTaGAGGCTGGATACCTTCCTC +
Preference number: 3 (lower is better)
Translates to: LASWALFVWQVLNPRLICGHNDD*RLDTFL
Trigger: GAGGAAGGTATCCAGCCTCAAGTCATCATTGTGGCC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGACAATCATTCACCTTaGTTCCCTGCAGCAGGTATC +
Preference number: 3 (lower is better)
Translates to: STSSCFSSAAVKACCMARDNHSP*FPAAGI
Trigger: GATACCTGCTGCAGGGAACAAAGGTGAATGATTGTC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAGGACCTAGGAAGTGCTaGGCACCTAGTAGTGGCTTG +
Preference number: 3 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSGPRKC*APSSGL
Trigger: CAAGCCACTACTAGGTGCCAAGCACTTCCTAGGTCC...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp AAGGCATGCTGCATGGCCAGACAGCTGTGGTCCAAGTaGCATGCAAGGCTGCCTTTTTATCTTGTTGGTCTT +
Preference number: 3 (lower is better)
Translates to: KACCMARQLWSK*HARLPFYLVGL
Trigger: AAGACCAACAAGATAAAAAGGCAGCCTTGCATGTCACTTGGACCACAGCTGTCTGGCCATGCAGCATGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp AAGTCAACAGCAGTGAGAGAAGCCCCAGAGAAGGTTTaGGTCTGGTCTGTCAAAAGCAGGAGGAGAGGTCAT +
Preference number: 3 (lower is better)
Translates to: KSTAVREAPEKV*VWSVKSRRRGH
Trigger: ATGACCTCTCCTCCTGCTTTTGACAGACCAGACTCAAACCTTCTCTGGGGCTTCTCTCACTGCTGTTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp TCAAAAGCAGGAGGAGAGGTCATAGTCCTTGCGATGTaGCCTTCCCCAGCTTGGAGCGTTTGGCAAATATTA +
Preference number: 3 (lower is better)
Translates to: SKAGGEVIVLAM*PSPAWSVWQIL
Trigger: TAATATTTGCCAAACGCTCCAAGCTGGGGAAGGGCACATCGCAAGGACTATGACCTCTCCTCCTGCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp CCCACCTGCACACTTGCCTCTTGGGCCTTGTTTGTCTaGCAAGTCCTAAATCCCAGACTCATTTGTTCACTT +
Preference number: 3 (lower is better)
Translates to: PTCTLASWALFV*QVLNPRLICSL
Trigger: AAGTGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAGTGTGCAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAGCCAGGCCTGTCCATTaGGTGTATTCCATCTTCCTG +
Preference number: 3 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSARPVH*VYSIFL
Trigger: CAGGAAGATGGAATACACCAAATGGACAGGCCTGGC...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CTTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGCCAATCTGTGCTGCGTaGACCACACAATCTTCCTCA +
Preference number: 3 (lower is better)
Translates to: LSTHIGAQSHSSSQHEHRPICAA*TTQSSS
Trigger: TGAGGAAGATTGTGTGGTCAACGCAGCACAGATTGG...CCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563188.5
3UTR GCA 72 bp CACTGTTGCAAGCTGCAACTAATCCCAAAAGCTGAATaGAACAAGTCAACAGCAGTGAGAGAAGCCCCAGAG +
Preference number: 3 (lower is better)
Translates to: HCCKLQLIPKAE*NKSTAVREAPE
Trigger: CTCTGGGGCTTCTCTCACTGCTGTTGACTTGTTGCATTCAGCTTTTGGGATTAGTTGCAGCTTGCAACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp AGTGAGGGAAGTAGAGTCAGGCTGTCAGTCCACTGTTaGAAGCTGCAACTAATCCCAAAAGCTGAATGCAAC +
Preference number: 3 (lower is better)
Translates to: SEGSRVRLSVHC*KLQLIPKAECN
Trigger: GTTGCATTCAGCTTTTGGGATTAGTTGCAGCTTGCAACAGTGGACTGACAGCCTGACTCTACTTCCCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp CACAATGATGACTTGAGGCTGGATACCTTCCTCGTCTaGACCAATGAGAACCAAATCCAGCAGTTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: HNDDLRLDTFLV*TNENQIQQFCQ
Trigger: CTGACAGAACTGCTGGATTTGGTTCTCATTGGTCCAGACGAGGAAGGTATCCAGCCTCAAGTCATCATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp ATGGGCCCCTCAGACCCTCTCTGTATTTTGACTCTTTaGCTTTCTCACTCACTAAGCTGTGAGATCCCTATG +
Preference number: 3 (lower is better)
Translates to: MGPSDPLCILTL*LSHSLSCEIPM
Trigger: CATAGGGATCTCACAGCTTAGTGAGTGAGAAAGCCAAAGAGTCAAAATACAGAGAGGGTCTGAGGGGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATTACAGCCTCCTTTGTaGCTAACTGTGGCCACATGG +
Preference number: 3 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSLQPPL*LTVATW
Trigger: CCATGTGGCCACAGTTAGCAACAAAGGAGGCTGTAA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCATCCTTCCTCAGAGTTTaGGCTGCCCAAGTAGAAACT +
Preference number: 3 (lower is better)
Translates to: ASWALFVWQVLNPRLICSSFLRV*AAQVET
Trigger: AGTTTCTACTTGGGCAGCCAAAACTCTGAGGAAGGA...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTACCAGCCAGCTGGATTaGACTACCTATAGTCACCAT +
Preference number: 3 (lower is better)
Translates to: LASWALFVWQVLNPRLICTSQLD*TTYSHH
Trigger: ATGGTGACTATAGGTAGTCAAATCCAGCTGGCTGGT...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACAGAACGAGGAAATGTaGTGCTATTTGGCCAGAAGG +
Preference number: 3 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSQNEEM*CYLARR
Trigger: CCTTCTGGCCAAATAGCACAACATTTCCTCGTTCTG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTAATTTACAGCCTCCTTaGTTGCTAACTGTGGCCACA +
Preference number: 3 (lower is better)
Translates to: LASWALFVWQVLNPRLICNLQPP*LLTVAT
Trigger: TGTGGCCACAGTTAGCAACAAAGGAGGCTGTAAATT...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTAGTTGGCGAGACATTTaGCTGAGACCAGTTCTGAAA +
Preference number: 3 (lower is better)
Translates to: LASWALFVWQVLNPRLICSWRDI*LRPVLK
Trigger: TTTCAGAACTGGTCTCAGCAAAATGTCTCGCCAACT...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACTGTATTTTGACTCTTaGGCTTTCTCACTCACTAAG +
Preference number: 3 (lower is better)
Translates to: STSSCFSSAAVKACCMARLYFDS*AFSLTK
Trigger: CTTAGTGAGTGAGAAAGCCAAAGAGTCAAAATACAG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGGGAGGATTAAATGTTaGCACCCCATAGATACAAAA +
Preference number: 3 (lower is better)
Translates to: STSSCFSSAAVKACCMARGRIKC*HPIDTK
Trigger: TTTTGTATCTATGGGGTGCAAACATTTAATCCTCCC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp GCTCACCTCATCCTCTGCCTAACACATATGAAAATCTaGCTCCCAGAAGGAAAGCAGATGTTGGGCATAACC +
Preference number: 3 (lower is better)
Translates to: AHLILCLTHMKI*LPEGKQMLGIT
Trigger: GGTTATGCCCAACATCTGCTTTCCTTCTGGGAGTCAGATTTTCATATGTGTTAGGCAGAGGATGAGGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp AGGGACTGCCTGAAGGCAGTGAGTCCCAAACAGTTTTaGTTGTTCAGGATACAAGTTGATCCATCTCATGAG +
Preference number: 3 (lower is better)
Translates to: RDCLKAVSPKQF*LFRIQVDPSHE
Trigger: CTCATGAGATGGATCAACTTGTATCCTGAACAAGCAAAACTGTTTGGGACTCACTGCCTTCAGGCAGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp CAGGGGCACAGGTGGTACCCCTGTAAACAAAGAATTTaGAATATTAGGGCACCTCAAGCAGGACATCCATTA +
Preference number: 3 (lower is better)
Translates to: QGHRWYPCKQRI*NIRAPQAGHPL
Trigger: TAATGGATGTCCTGCTTGAGGTGCCCTAATATTGCAAATTCTTTGTTTACAGGGGTACCACCTGTGCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp TTGAAAAAGAATCAGACGCTCTGGAAAGCTGATTGTTaGCACGTGGGCCTGTATTCCCACACAGTAACAACC +
Preference number: 3 (lower is better)
Translates to: LKKNQTLWKADC*HVGLYSHTVTT
Trigger: GGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACAATCAGCTTTCCAGAGCGTCTGATTCTTTTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568272.1
3UTR CCA 72 bp GCCTCAGAAGAATCTAAAGCTGTCGACACCTTGTCCTaGACTTTCAGCCTCCAGAACTGCAGGAAAATAAGT +
Preference number: 3 (lower is better)
Translates to: ASEESKAVDTLS*TFSLQNCRKIS
Trigger: ACTTATTTTCCTGCAGTTCTGGAGGCTGAAAGTCCAGGACAAGGTGTCGACAGCTTTAGATTCTTCTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAACTCACAACAAACCATaGAGAACTTTGGGAGTTTCC +
Preference number: 3 (lower is better)
Translates to: ASWALFVWQVLNPRLICSTHNKP*RTLGVS
Trigger: GGAAACTCCCAAAGTTCTCAATGGTTTGTTGTGAGT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGAAACTCTCACTTTTTaGACAGTTGGGAGGATTAAA +
Preference number: 3 (lower is better)
Translates to: STSSCFSSAAVKACCMARETLTF*TVGRIK
Trigger: TTTAATCCTCCCAACTGTCAAAAAAGTGAGAGTTTC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp ATCTGCATGACCCATTTGCCCAATGCCCAATGGATGTaGAGATACAGAAAAGTCCAGGTACTGTTTTCAGGG +
Preference number: 3 (lower is better)
Translates to: ICMTHLPNAQWM*RYRKVQVLFSG
Trigger: CCCTGAAAACAGTACCTGGACTTTTCTGTATCTTCACATCCATTGGGCATTGGGCAAATGGGTCATGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp CGTTTTAATAATCCACCTACCTTACTAAGCTGTGTGTaGTGGGAGAAAAGTGAGGGAAGTAGAGTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RFNNPPTLLSCV*WEKSEGSRVRL
Trigger: CAGCCTGACTCTACTTCCCTCACTTTTCTCCCAGCACACACAGCTTAGTAAGGTAGGTGGATTATTAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp GCAAGAGGAGGCTTCCAGGGATCAAGCCTCCCCAGGTaGCAGGCTTTAATTATTTTCTCCAATATTACAAAA +
Preference number: 3 (lower is better)
Translates to: ARGGFQGSSLPR*QALIIFSNITK
Trigger: TTTTGTAATATTGGAGAAAATAATTAAAGCCTGGCACCTGGGGAGGCTTGATCCCTGGAAGCCTCCTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp GATTTCCAGTTGCTTTTGAAAAAGAATCAGACGCTCTaGAAAGCTGATTGTTGCCACGTGGGCCTGTATTCC +
Preference number: 3 (lower is better)
Translates to: DFQLLLKKNQTL*KADCCHVGLYS
Trigger: GGAATACAGGCCCACGTGGCAACAATCAGCTTTCCAGAGCGTCTGATTCTTTTTCAAAAGCAACTGGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568272.1
3UTR-3UTR CAA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATCCCATCACCTTGTTTaGGATGAAGAAAAGGTCATG +
Preference number: 3 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSSHHLV*DEEKVM
Trigger: CATGACCTTTTCTTCATCCAAAACAAGGTGATGGGA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAACTAGCTGTATGACCTaGGGAAAGTACTTAATCTCT +
Preference number: 3 (lower is better)
Translates to: ASWALFVWQVLNPRLICSTSCMT*GKYLIS
Trigger: AGAGATTAAGTACTTTCCCAAGGTCATACAGCTAGT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp TTAATCATGTGGCCAAACATGCATGGCCACAGTGACTaGTCCAAGAGGACATGGAACTCACAACAAACCATT +
Preference number: 3 (lower is better)
Translates to: LIMWPNMHGHSD*SKRTWNSQQTI
Trigger: AATGGTTTGTTGTGAGTTCCATGTCCTCTTGGATCAGTCACTGTGGCCATGCATGTTTGGCCACATGATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp TTGGATGGTTTTCATCTGCATGACCCATTTGCCCAATaGCCAATGGATGTGAAGATACAGAAAAGTCCAGGT +
Preference number: 3 (lower is better)
Translates to: LDGFHLHDPFAQ*PMDVKIQKSPG
Trigger: ACCTGGACTTTTCTGTATCTTCACATCCATTGGGCATTGGGCAAATGGGTCATGCAGATGAAAACCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp ATTACAGACTCAGTGTTCAGGGTTCTCATTGGGAGCTaGTCACCTCATCCTCTGCCTAACACATATGAAAAT +
Preference number: 3 (lower is better)
Translates to: ITDSVFRVLIGS*SPHPLPNTYEN
Trigger: ATTTTCATATGTGTTAGGCAGAGGATGAGGTGAGCAGCTCCCAATGAGAACCCTGAACACTGAGTCTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp GTAAGGTGCTATGGGAACCATAAGGATGCAGTTCCATaGCCCAGTCAGCTCATCTGGGGAAAAATAATAAAA +
Preference number: 3 (lower is better)
Translates to: VRCYGNHKDAVP*PSQLIWGKIIK
Trigger: TTTTATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTTCCCATAGCACCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTAAACCATTGAGAACTTaGGGAGTTTCCAAATTCGAA +
Preference number: 3 (lower is better)
Translates to: LASWALFVWQVLNPRLICKPLRT*GVSKFE
Trigger: TTCGAATTTGGAAACTCCCAAAGTTCTCAATGGTTT...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATTCTCCATCTCTTGTTaGTGGCGGACTGATTATAAA +
Preference number: 3 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSFSISC*WRTDYK
Trigger: TTTATAATCAGTCCGCCACAAACAAGAGATGGAGAA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp TTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGAAAGAATGCAACACCTTaGCTGAACTTCTTGAATGGT +
Preference number: 3 (lower is better)
Translates to: FQHTSAPNHTVLPNMNIGKNATP*LNFLNG
Trigger: ACCATTCAAGAAGTTCAGCAAAGGTGTTGCATTCTT...TCCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563188.5
3UTR TCA 72 bp CTGATCCAAGAGGACATGGAACTCACAACAAACCATTaGGAACTTTGGGAGTTTCCAAATTCGAACTGGAAG +
Preference number: 3 (lower is better)
Translates to: LIQEDMELTTNH*ELWEFPNSNWK
Trigger: CTTCCAGTTCGAATTTGGAAACTCCCAAAGTTCTCAATGGTTTGTTGTGAGTTCCATGTCCTCTTGGATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp AAAACATGGATTTTGCAGCCAAGTAAGAGCTGGCCTTaGTTCCAGCTCAGCCATTTATTAGATGTGTGGCAT +
Preference number: 3 (lower is better)
Translates to: KTWILQPSKSWP*FQLSHLLDVWH
Trigger: ATGCCACACATCTAATAAATGGCTGAGCTGGAATCAAGGCCAGCTCTTACTTGGCTGCAAAATCCATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp TATGTGCCAGGCACAAGGCTAAGAGTTTTACAGAGATaGTCTCATTTACCTTGGGTTACTTACCCAACCAAG +
Preference number: 3 (lower is better)
Translates to: YVPGTRLRVLQR*SHLPWVTYPTK
Trigger: CTTGGTTGGGTAAGTAACCCAAGGTAAATGAGATCATCTCTGTAAAACTCTTAGCCTTGTGCCTGGCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR TCA 72 bp TCACAAACTGAACAAATCTGTAAACCACACCCAGATTaGGAAAGGGAACATGACAAACACCCTGCAAGTCTC +
Preference number: 3 (lower is better)
Translates to: SQTEQICKPHPD*EREHDKHPASL
Trigger: GAGACTTGCAGGGTGTTTGTCATGTTCCCTTTCTCAATCTGGGTGTGGTTTACAGATTTGTTCAGTTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp CAAGCACATATTCTACTAAAAGCACAAGCCCATTGCTaGGGGGCTCTAGAAGTGTTTCAGTTATCATGTACT +
Preference number: 3 (lower is better)
Translates to: QAHILLKAQAHC*GALEVFQLSCT
Trigger: AGTACATGATAACTGAAACACTTCTAGAGCCCCCCAGCAATGGGCTTGTGCTTTTAGTAGAATATGTGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR-3UTR CAA 90 bp TCTCACAGCTTGGGCTTAGTTTCCTCTTTGTGTTTGGCCCTTCATAATTTCCTTAGCTCTATCAACATATaGCCAGAGATAGGAATCGTA +
Preference number: 3 (lower is better)
Translates to: SHSLGLVSSLCLALHNFLSSINI*PEIGIV
Trigger: TACGATTCCTATCTCTGGCAATATGTTGATAGAGCT...AAGGAAATTATGAAGGGCCAAACACAAAGAGGAAACTAAGCCCAAGCTGTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568589.5
3UTR TCA 72 bp TTCAGGATACAAGTTGATCCATCTCATGAGCATGGATaGCATTTGTGGGAGATCTTCATGGAAAGCATAGAA +
Preference number: 3 (lower is better)
Translates to: FRIQVDPSHEHG*HLWEIFMESIE
Trigger: TTCTATGCTTTCCATGAAGATCTCCCACAAATGTCATCCATGCTCATGAGATGGATCAACTTGTATCCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR GCA 72 bp CTTCTTTACAGCAAAATTATTATTAGTAGGACCACATaGAAAAGGGTGAGACCAACCTCAAATATGGACCTC +
Preference number: 3 (lower is better)
Translates to: LLYSKIIISRTT*KRVRPTSNMDL
Trigger: GAGGTCCATATTTGAGGTTGGTCTCACCCTTTTGCATGTGGTCCTACTAATAATAATTTTGCTGTAAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CCA 72 bp CGAATCACAGCAAAAATAATCAGTTACAGCCTGTTCTaGTTCCAATATCCGAAGAATTTAAATTCCAACCTA +
Preference number: 3 (lower is better)
Translates to: RITAKIISYSLF*FQYPKNLNSNL
Trigger: TAGGTTGGAATTTAAATTCTTCGGATATTGGAACCAGAACAGGCTGTAACTGATTATTTTTGCTGTGATTCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp GAACCTGGGTGCCTGATGACATCATGGACCAGCCCCTaGCCTGGCCTGGACCAGCTGACTATCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: EPGCLMTSWTSP*PGLDQLTITAL
Trigger: CAGTGCAGTGATAGTCAGCTGGTCCAGGCCAGGCAAGGGGCTGGTCCATGATGTCATCAGGCACCCAGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACTCCGGGAGCTCCCCTaGGAAGAGTCCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARLRELP*EESWAA
Trigger: GGCTGCCCAGGACTCTTCTCAGGGGAGCTCCCGGAG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAATGTGAGGGTTGGGGGTaGGGGTGGTCACATCCAGGC +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGECEGWG*GWSHPG
Trigger: GCCTGGATGTGACCACCCTCACCCCCAACCCTCACA...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACTGTGCAGCATATGGTaGGGGGCCCACCTTCTTACC +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGELCSIW*GAHLLT
Trigger: GGTAAGAAGGTGGGCCCCTCACCATATGCTGCACAG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACCAACTACACCCACCTaGACACTTGCCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEPTTPT*TLASWA
Trigger: GGCCCAAGAGGCAAGTGTGCAGGTGGGTGTAGTTGG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp GGAAAGAGGAGAGGCCTGAACTGGACAGCTGATGCTTaGTCCTGCCCAGCACCCATTCGTCCCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GKRRGLNWTADA*SCPAPIRPFFR
Trigger: CCTGAAGAAGGGACGAATGGGTGCTGGGCAGGACAAAGCATCAGCTGTCCAGTTCAGGCCTCTCCTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp CTGGCCCACCAGCAAAAGCTTCAGGAGAGCAAGGGATaGGCTGACTGGGCTGCAAGGGTAGTGTTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LAHQQKLQESKG*ADWAARVVFKA
Trigger: GGCTTTGAACACTACCCTTGCAGCCCAGTCAGCCAATCCCTTGCTCTCCTGAAGCTTTTGCTGGTGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAATCTCCCAGACTCCTCTaGCCCTACTCTTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGESPRLL*PYSSSG
Trigger: ACCTGAGGAAGAGTAGGGTCAGAGGAGTCTGGGAGA...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACCAGGACCTAGGAAGTaGTTGGCACCTAGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEPGPRK*LAPSSG
Trigger: GCCACTACTAGGTGCCAAGCACTTCCTAGGTCCTGG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGCAAGCTCCGCCCCCTaGGTTCGCGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSASSAP*VRAILL
Trigger: CAGGAGAATGGCGCGAACCCAGGGGGCGGAGCTTGC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAAAGTTCCCAGAGTCCTTaGCTTCCAAGGGACTGCCTG +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGESSQSP*LPRDCL
Trigger: CAGGCAGTCCCTTGGAAGCCAAGGACTCTGGGAACT...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACATGGCCACAGTGACTaGTCCAAGAGGACATGGAAC +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEHGHSD*SKRTWN
Trigger: GTTCCATGTCCTCTTGGATCAGTCACTGTGGCCATG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGCTGATGCTTTGTCCTaGCCAGCACCCATTCGTCCC +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARADALS*PAPIRP
Trigger: GGGACGAATGGGTGCTGGGCAGGACAAAGCATCAGC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGCCAAGGGCCAGCCTTaGAAACAGGCCTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARAKGQP*KQACFL
Trigger: GAGAAAGCAGGCCTGTTTGCAAGGCTGGCCCTTGGC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACACAAGGAAAGCAGGTaGGGCTGGCCCACCAGCAAA +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARHKESR*GWPTSK
Trigger: TTTGCTGGTGGGCCAGCCCCACCTGCTTTCCTTGTG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAAGTCGACACCTTGTCCTaGACTTTCAGCCTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEVDTLS*TFSLQN
Trigger: GTTCTGGAGGCTGAAAGTCCAGGACAAGGTGTCGAC...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp GTGTTTCCAGTCCCATCTGAAAAGTTCCCAGAGTCCTaGGCTTCCAAGGGACTGCCTGAAGGCAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: VFPVPSEKFPES*ASKGLPEGSES
Trigger: GGACTCACTGCCTTCAGGCAGTCCCTTGGAAGCCAAGGACTCTGGGAACTTTTCAGATGGGACTGGAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAAGTGTTCAAAGCCAGCTaGCTTGGAGGCCAAGATAGT +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEVFKAS*LGGQDS
Trigger: ACTATCTTGGCCTCCAAGGCAGCTGGCTTTGAACAC...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATTGCCCAGGCTAGAGTaGGGTGGCACGATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARLPRLE*GGTILA
Trigger: AGCCAAAATCGTGCCACCGCACTCTAGCCTGGGCAA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATACCAGGGGAACTCCTaGCCAAGTGTTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARYQGNS*PSVSSP
Trigger: GGGACTGGAAACACTTGGGCAGGAGTTCCCCTGGTA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGAGAGGCGCTCAGCATaGGCAGTGAATGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSERRSA*AVNGRE
Trigger: CTCACGGCCATTCACTGCCCATGCTGAGCGCCTCTC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACAATCTGTGCTGCGTTaGCCACACAATCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEQSVLR*PHNLPQ
Trigger: TTGAGGAAGATTGTGTGGTCAACGCAGCACAGATTG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTCCAACCCAACTCTGCTaGCTCCCAACTACACCCACC +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICPTQLC*LPTTPT
Trigger: GGTGGGTGTAGTTGGGAGTCAGCAGAGTTGGGTTGG...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATTCCCTGCAGGCACTGTaGCATCTGATATATGGGCTC +
Preference number: 4 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDSLQAL*HLIYGL
Trigger: GAGCCCATATATCAGATGTCACAGTGCCTGCAGGGA...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAACACCGGAAGGGTGCTaGTGCTCTGCAGGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSTPEGC*CSAGPF
Trigger: AAACGGACCTGCAGAGCAGCAGCACCCTTCCGGTGT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACTCGGCCTCCCAAAGTaGTGGGATCATATGCATCCA +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARLGLPK*WDHMHP
Trigger: TGGATGCATATGATCCCAGCACTTTGGGAGGCCGAG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGTGATCTTGGCTCACTaGAGCCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICVILAH*SLHLLG
Trigger: ACCCAGGAGGTGGAGGCTGCAGTGAGCCAAGATCAC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAAAAGACAGTAGGAACCTaGGTGCCTGATGACATCATG +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEKTVGT*VPDDIM
Trigger: CATGATGTCATCAGGCACCCAGGTTCCTACTGTCTT...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACTTGTTGTCTCCCAATaGCCATTCTTCCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARLVVSQ*PFFPHS
Trigger: GGAGTGGGGGAAGAATGGCCATTGGGAGACAACAAG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAAGACAGATCCCTGTTTaGAGTCCTGGGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARRQIPV*SPGMQP
Trigger: AGGCTGCATCCCAGGACTCCAAACAGGGATCTGTCT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATCAATCATCAGCTCCTaGGTGCACTCCGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSSIISS*VHSGSS
Trigger: GGAGCTCCCGGAGTGCACTCAGGAGCTGATGATTGA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp TTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGATCAATCATCAGCTCCTaGGTGCACTCCGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FQHTSAPNHTVLPNMNIGSIISS*VHSGSS
Trigger: GGAGCTCCCGGAGTGCACTCAGGAGCTGATGATTGA...TCCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566053.5
CDS-3UTR TCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATACCACAGACTCAGGCCTaGCTCCTCAGGAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIPQTQA*LLRSSQ
Trigger: CTGTGAGCTCCTGAGGAGTCAGGCCTGAGTCTGTGG...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAATCCAGCAATCAGTTGTaGCAACCCATGTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGESSNQL*QPMCNV
Trigger: AACATTGCACATGGGTTGTCACAACTGATTGCTGGA...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACGGCGAAGGCTCATGTaGAGCAGGAGGAAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSRRRLM*SRRKGS
Trigger: GCTTCCTTTCCTCCTGCTGCACATGAGCCTTCGCCG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACTGCAGCAGGTATCCTaGAATCTGAGACTTATCTTG +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGELQQVS*NLRLIL
Trigger: CAAGATAAGTCTCAGATTGCAGGATACCTGCTGCAG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAAACCACAAGGGCTCTGTaGAGCCATGTAAAACAGAAT +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGETTRAL*SHVKQN
Trigger: ATTCTGTTTTACATGGCTGCACAGAGCCCTTGTGGT...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACTGCTGAGCATCCACTaGATGTGTTTTACTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGELLSIH*MCFTCS
Trigger: GGAACAAGTAAAACACATGCAGTGGATGCTCAGCAG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAGCAGCAGTGAAGGCATaGTGCATGGCCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSAAVKA*CMARQL
Trigger: CAGCTGTCTGGCCATGCAGCATGCCTTCACTGCTGC...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAATTCTCAACAAGCAGCTaGTTTTCTTCAGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEFSTSS*FSSAAV
Trigger: CACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGAGAA...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAACGATTTTGGCTCACTaGAACCTCCGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSTILAH*NLRLLG
Trigger: GCCCAGGAGGCGGAGGTTGCAGTGAGCCAAAATCGT...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATGGCTTCCAAGGGACTaGCTGAAGGCAGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSWLPRD*LKAVSP
Trigger: GGGACTCACTGCCTTCAGGCAGTCCCTTGGAAGCCA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATTGGAAAGCTGATTGTTaGCACGTGGGCCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDWKADC*HVGLYS
Trigger: GGAATACAGGCCCACGTGGCAACAATCAGCTTTCCA...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAAGCTATCAGCTGTCATaGCTCCAAATGCACGGCGAA +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARSYQLS*LQMHGE
Trigger: TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGGACTTGCAGCTCCATaGAAGCTAACCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICGLAAP*KLTPRR
Trigger: TCTCCTGGGGGTTAGCTTCCATGGAGCTGCAAGTCC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAGAAAGCAGGTGGGGCTaGCCCACCAGCAAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSESRWG*PTSKSF
Trigger: GAAGCTTTTGCTGGTGGGCCAGCCCCACCTGCTTTC...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGCAACCTCCGCCTCCTaGGCTCAAGCCATCCTCCTA +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIATSAS*AQAILL
Trigger: TAGGAGGATGGCTTGAGCCCAGGAGGCGGAGGTTGC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp ATGGAAGCTAACCCCCAGGAGACCAGCCAGCTGGATTaGACTACCTATAGTCACCATCCAGGTTGTCAGATG +
Preference number: 4 (lower is better)
Translates to: MEANPQETSQLD*TTYSHHPGCQM
Trigger: CATCTGACAACCTGGATGGTGACTATAGGTAGTCAAATCCAGCTGGCTGGTCTCCTGGGGGTTAGCTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp CCAACTACACCCACCTGCACACTTGCCTCTTGGGCCTaGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATT +
Preference number: 4 (lower is better)
Translates to: PTTPTCTLASWA*FVWQVLNPRLI
Trigger: AATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAGTGTGCAGGTGGGTGTAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp CAAGTCAACAGCAGTGAGAGAAGCCCCAGAGAAGGTTaGAGTCTGGTCTGTCAAAAGCAGGAGGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: QVNSSERSPREG*SLVCQKQEERS
Trigger: TGACCTCTCCTCCTGCTTTTGACAGACCAGACTCAAACCTTCTCTGGGGCTTCTCTCACTGCTGTTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGCCACAATGATGACTTaGGGCTGGATACCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICATMMT*GWIPSS
Trigger: CGAGGAAGGTATCCAGCCTCAAGTCATCATTGTGGC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGAGCAAGGGATTGGCTaGCTGGGCTGCAAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIEQGIG*LGCKGS
Trigger: ACTACCCTTGCAGCCCAGTCAGCCAATCCCTTGCTC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGCAGGTGGCAAAGCTTaGATTCCAACCCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSAGGKA*IPTQLC
Trigger: GCAGAGTTGGGTTGGAATTCAAGCTTTGCCACCTGC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAATTAGGCTGTACAGGTaGACAGACCTCCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSIRLYR*TDLLPG
Trigger: CCCTGGTAGGAGGTCTGTTCACCTGTACAGCCTAAT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGACTTTGTTCCCAGATaGCGTCTCGATGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARDFVPR*RLDVLR
Trigger: TCTGAGTACATCGAGACGGCATCTGGGAACAAAGTC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATGACTTTGTTCCCAGATaGCGTCTCGATGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDDFVPR*RLDVLR
Trigger: TCTGAGTACATCGAGACGGCATCTGGGAACAAAGTC...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCATGTCATGGCTCCAAATaGACGGCGAAGGCTCATGTG +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSCHGSK*TAKAHV
Trigger: CACATGAGCCTTCGCCGTGCATTTGGAGCCATGACA...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATGGTCATTGAGCCTGTaGCTGCTTTCAGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARWSLSL*LLSVQH
Trigger: ATGCTGAACTGAAAGCAGGCACAGGCTCAATGACCA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGTTCTCATTGGGAGCTaGTCACCTCATCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSVLIGS*SPHPLP
Trigger: AGGCAGAGGATGAGGTGAGCAGCTCCCAATGAGAAC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAAAGGATGCAGTTCCATaGCCCAGTCAGCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSKDAVP*PSQLIW
Trigger: CCAGATGAGCTGACTGGGCCATGGAACTGCATCCTT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTGGCACAGGTCAGTATaGCCAAGAAACACCATGGGC +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICWHRSV*PRNTMG
Trigger: GCCCATGGTGTTTCTTGGCCATACTGACCTGTGCCA...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATGCCCTTCCCCAGCTTaGAGCGTTTGGCAAATATTA +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARCPSPA*SVWQIL
Trigger: TAATATTTGCCAAACGCTCCAAGCTGGGGAAGGGCA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp ACCCAACCAAGGTTTATAGCCAGCAGGTGGCAAAGCTaGAATTCCAACCCAACTCTGCTGACTCCCAACTAC +
Preference number: 4 (lower is better)
Translates to: TQPRFIASRWQS*NSNPTLLTPNY
Trigger: GTAGTTGGGAGTCAGCAGAGTTGGGTTGGAATTCAAGCTTTGCCACCTGCTGGCTATAAACCTTGGTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATGTGGGGCCACACTGTaGAGCCCAAGAATAAAGCCA +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSCGATL*SPRIKP
Trigger: TGGCTTTATTCTTGGGCTTCACAGTGTGGCCCCACA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCACCTCGTCTGGACCAATaGGAACCAAATCCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSPRLDQ*EPNPAV
Trigger: AACTGCTGGATTTGGTTCTCATTGGTCCAGACGAGG...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATGGTTCATGCAGAAGTaGCTAATACAGAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARWFMQK*LIQKPP
Trigger: TGGTGGCTTCTGTATTAGTCACTTCTGCATGAACCA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTCCAGCCAGCTGGATTTaGCTACCTATAGTCACCATC +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICPASWI*LPIVTI
Trigger: GATGGTGACTATAGGTAGTCAAATCCAGCTGGCTGG...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTAAGCCAGAGTGGGTGTaGATTTCACTCCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICKPEWV*ISLPCL
Trigger: GAGACATGGGAGTGAAATTCACACCCACTCTGGCTT...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATTTCTTCAGCAGCAGTaGAGGCATGCTGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSFLQQQ*RHAAWP
Trigger: TGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACAGGCAATTAGGATCTaGGAATTTGAGATTCTCAAC +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEQAIRI*EFEILN
Trigger: GTTGAGAATCTCAAATTCTCAGATCCTAATTGCCTG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAACAAGTCAACAGCAGTaGGAGAAGCCCCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSTSQQQ*EKPQRR
Trigger: CCTTCTCTGGGGCTTCTCTCACTGCTGTTGACTTGT...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATCTCATGAGCATGGATaGCATTTGTGGGAGATCTTC +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARSHEHG*HLWEIF
Trigger: GAAGATCTCCCACAAATGTCATCCATGCTCATGAGA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAAATGCTTTCCAGGGCTaGGGGGACATCATGAGAGTT +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSNAFQG*GDIMRV
Trigger: AACTCTCATGATGTCCCCTCAGCCCTGGAAAGCATT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp TTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGACTCCAGCCTTGCCATTaGGAACGATGTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FQHTSAPNHTVLPNMNIGLQPCH*ERCSGF
Trigger: GAAGCCAGAACATCGTTCTCAATGGCAAGGCTGGAG...TCCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563188.5
CDS-3UTR TCA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATCAAAGTTCTTGCCATTaGGAACGATGTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDQSSCH*ERCSGF
Trigger: GAAGCCAGAACATCGTTCTCAATGGCAAGAACTTTG...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR TCA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATAGGCACTGTGACATCTaGTATATGGGCTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDRHCDI*YMGSGK
Trigger: TTTTCCTGAGCCCATATATCAGATGTCACAGTGCCT...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR GCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAGTCTCTGTGGGTACATaGCAGGCCTGTCCATTTGGT +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSVSVGT*QACPFG
Trigger: ACCAAATGGACAGGCCTGGCATGTACCCACAGAGAC...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGGGTCCAAGTCAGAGTaGACAAGGAAAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIGSKSE*TRKAGG
Trigger: CCCACCTGCTTTCCTTGTGCACTCTGACTTGGACCC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTGCACACTTGCCTCTTaGGCCTTGTTTGTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICCTLAS*ALFVWQ
Trigger: TTGCCAGACAAACAAGGCCCAAGAGGCAAGTGTGCA...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAATGGAAAGGCAGCACTaGGAATTTTCCTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARMERQH*EFSFSK
Trigger: CTTGCTGAAGGAAAATTCCCAGTGCTGCCTTTCCAT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp CAGTCAACAGGAGGCTCACAAGACAATCATTCACCTTaGTTCCCTGCAGCAGGTATCCTGCAATCTGAGACT +
Preference number: 4 (lower is better)
Translates to: QSTGGSQDNHSP*FPAAGILQSET
Trigger: AGTCTCAGATTGCAGGATACCTGCTGCAGGGAACAAAGGTGAATGATTGTCTTGTGAGCCTCCTGTTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp GCTCTCAAAATGGGCCCCTCAGACCCTCTCTGTATTTaGACTCTTTGGCTTTCTCACTCACTAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ALKMGPSDPLCI*TLWLSHSLSCE
Trigger: CTCACAGCTTAGTGAGTGAGAAAGCCAAAGAGTCAAAATACAGAGAGGGTCTGAGGGGCCCATTTTGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGCCTCAGATCCTGAGTaGAATGGTTCATGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSASDPE*NGSCRS
Trigger: ACTTCTGCATGAACCATTTCACTCAGGATCTGAGGC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTAGTAAGAGCTGGCCTTaGTTCCAGCTCAGCCATTTA +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICSKSWP*FQLSHL
Trigger: TAAATGGCTGAGCTGGAATCAAGGCCAGCTCTTACT...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAACTAATCCCAAAAGCTaGATGCAACAAGTCAACAGC +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARTNPKS*MQQVNS
Trigger: GCTGTTGACTTGTTGCATTCAGCTTTTGGGATTAGT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAACTCTGTTGTCAGTCTaGACTCAAAGCACTCACAGC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSTLLSV*TQSTHS
Trigger: GCTGTGAGTGCTTTGAGTTCAGACTGACAACAGAGT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CTTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGTGCAACACTTGCCATTaGGAACGATGTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LSTHIGAQSHSSSQHEHRCNTCH*ERCSGF
Trigger: GAAGCCAGAACATCGTTCTCAATGGCAAGTGTTGCA...CCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566053.5
CDS-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAAACGAGGAAATGTTGTaGTATTTGGCCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARNEEML*YLARRR
Trigger: TCTCCTTCTGGCCAAATAGCACAACATTTCCTCGTT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCACCAGCTGACTATCACTaGACTGTTATGGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSPADYH*TVMGER
Trigger: TCTCTCTCCCATAACAGTGCAGTGATAGTCAGCTGG...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCATCAGGTAATATCATCTaGCACCACAACCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSSGNII*HHNHQH
Trigger: GTGCTGGTGGTTGTGGTGGCAGATGATATTACCTGA...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGGCGCCTCGGTAAGGTaGTATGGGAACCATAAGGAT +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIGASVR*YGNHKD
Trigger: ATCCTTATGGTTCCCATAGCACCTTACCGAGGCGCC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCATTCACCTTTGTTCCCTaGAGCAGGTATCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSFTFVP*SRYPAI
Trigger: GATTGCAGGATACCTGCTGCAGGGAACAAAGGTGAA...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAACTCATTTGTTCACTTaGTTGCTTCCTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSTHLFT*LLPPSL
Trigger: GAGGGAGGGAGGAAGCAAGCAAGTGAACAAATGAGT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAAGTGCTGGGATCATATaGATCCATCACTGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIISAGII*IHHCAW
Trigger: CCAGGCGCAGTGATGGATGCATATGATCCCAGCACT...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAATCCAAGCTTTCAGATaGCAGCCAAGGGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIIQAFR*QPRASL
Trigger: AAGGCTGGCCCTTGGCTGGCATCTGAAAGCTTGGAT...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACTAACTGTGGCCACATaGCAAGACAGTAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSLTVAT*QDSRNL
Trigger: CAGGTTCCTACTGTCTTGCCATGTGGCCACAGTTAG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGCACAAGCCCATTGCTaGGGGGCTCTAGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIAQAHC*GALEVF
Trigger: AAACACTTCTAGAGCCCCCCAGCAATGGGCTTGTGC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGGCCTTTTCAGTTCCTaGGGCTCTCATATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICGLFSS*GSHISS
Trigger: TGAGGAAATATGAGAGCCCCAGGAACTGAAAAGGCC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTGGGCCTTGTTTGTCTaGCAAGTCCTAAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICWALFV*QVLNPR
Trigger: TCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCA...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGTTCAGGGTTCTCATTaGGAGCTGCTCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIVQGSH*ELLTSS
Trigger: GGATGAGGTGAGCAGCTCCCAATGAGAACCCTGAAC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp TTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGACAATCTGTGCTGCGTTaGCCACACAATCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: FQHTSAPNHTVLPNMNIGQSVLR*PHNLPQ
Trigger: TTGAGGAAGATTGTGTGGTCAACGCAGCACAGATTG...TCCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563188.5
ENST00000566053.5
CDS-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAATTGAGTGCTCACCCTaGGCCAGTACTTATGCTTTA +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSIECSP*ASTYAL
Trigger: TAAAGCATAAGTACTGGCTCAGGGTGAGCACTCAAT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATATGGTTTTCATCTGCATaGCCCATTTGCCCAATGCCC +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIWFSSA*PICPMP
Trigger: GGGCATTGGGCAAATGGGTCATGCAGATGAAAACCA...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACCACATGCAAAAGGGTaGGACCAACCTCAAATATGG +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSPHAKG*DQPQIW
Trigger: CCATATTTGAGGTTGGTCTCACCCTTTTGCATGTGG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCATTGAGAAAGGGAACATaGCAAACACCCTGCAAGTCT +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSLRKGT*QTPCKS
Trigger: AGACTTGCAGGGTGTTTGTCATGTTCCCTTTCTCAA...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGAGACTTTGTTCCCAGATaGCGTCTCGATGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: FQHTSAPNHTVLPNMNIGDFVPR*RLDVLR
Trigger: TCTGAGTACATCGAGACGGCATCTGGGAACAAAGTC...TCCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563188.5
ENST00000566053.5
CDS-3UTR GCA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACTGAGCCAGTACTTATaGTTTACATGTATAAATGCA +
Preference number: 4 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGELSQYL*FTCINA
Trigger: TGCATTTATACATGTAAAGCATAAGTACTGGCTCAG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTTACTAAGCTGTGTGTaGTGGGAGAAAAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICLLSCV*WEKSEG
Trigger: TCCCTCACTTTTCTCCCAGCACACACAGCTTAGTAA...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGGAACCAAAGGCACATaGCATCATGTCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSGTKGT*HHVQLI
Trigger: AATTAGCTGGACATGATGGCATGTGCCTTTGGTTCC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCACCTTGCAAACAGGCCTaGTTTCTCATCTCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSPCKQA*FLISFH
Trigger: GTGAAAAGAGATGAGAAAGCAGGCCTGTTTGCAAGG...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAACTGGATTAATCATGTaGCCAAACATGCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSTGLIM*PNMHGH
Trigger: GTGGCCATGCATGTTTGGCCACATGATTAATCCAGT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGATACCTTCCTCGTCTaGACCAATGAGAACCAAATC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSDTFLV*TNENQI
Trigger: GATTTGGTTCTCATTGGTCCAGACGAGGAAGGTATC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGGGAACTGTAGAAGTTaGCGAGACATTTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSGNCRS*RDILLR
Trigger: TCTCAGCAAAATGTCTCGCCAACTTCTACAGTTCCC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCATTCTTACTGCTCCTGTaGGAAATCAGAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSFLLLL*EIRKSS
Trigger: GCTGCTCTTTCTGATTTCCCACAGGAGCAGTAAGAA...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATGCCAGATGTATCAGTaGCTAAGAAAGGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSCQMYQ*LRKELW
Trigger: CCACAGTTCCTTTCTTAGTCACTGATACATCTGGCA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAACAGGCACATGGTTTTaGCAGTTGTTTCTGTTATTA +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARTGTWF*QLFLLL
Trigger: TAATAACAGAAACAACTGTCAAAACCATGTGCCTGT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATATTTCCAGTTGCTTTTaGAAAAGAATCAGACGCTCT +
Preference number: 4 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDISSCF*KRIRRS
Trigger: AGAGCGTCTGATTCTTTTTCAAAAGCAACTGGAAAT...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAAATATCAGTTTCCTCTaGTGTAAAACAGGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARNISFL*CKTGCE
Trigger: TTCACAGCCTGTTTTACAGCAGAGGAAACTGATATT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAGTGGTCCAAGTGACATaGAAGGCTGCCTTTTTATCT +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSVVQVT*KAAFLS
Trigger: AGATAAAAAGGCAGCCTTGCATGTCACTTGGACCAC...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAAGTCCCAAACAGTTTTaGTTGTTCAGGATACAAGTT +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARSPKQF*LFRIQV
Trigger: AACTTGTATCCTGAACAAGCAAAACTGTTTGGGACT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAATTAGTAGGACCACATaGAAAAGGGTGAGACCAACC +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSISRTT*KRVRPT
Trigger: GGTTGGTCTCACCCTTTTGCATGTGGTCCTACTAAT...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACTAAGAAAGGAACTGTaGCCTCAGATCCTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSLRKEL*PQILSE
Trigger: TTCACTCAGGATCTGAGGCCACAGTTCCTTTCTTAG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACCTATGAGAAAGAACTaGCTCCATCTTAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSPMRKN*LHLSLH
Trigger: GTGGAGACTAAGATGGAGCCAGTTCTTTCTCATAGG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATGTATTTTGACTCTTTaGCTTTCTCACTCACTAAGC +
Preference number: 4 (lower is better)
Translates to: STSSCFSSAAVKACCMARCILTL*LSHSLS
Trigger: GCTTAGTGAGTGAGAAAGCCAAAGAGTCAAAATACA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATGTGACATCTGATATATaGGCTCAGGAAAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDVTSDI*AQENRN
Trigger: ATTTCTGTTTTCCTGAGCCCATATATCAGATGTCAC...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568272.1
3UTR CAA 72 bp GACTGCCTGAAGGCAGTGAGTCCCAAACAGTTTTGCTaGTTCAGGATACAAGTTGATCCATCTCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: DCLKAVSPKQFC*FRIQVDPSHEH
Trigger: ATGCTCATGAGATGGATCAACTTGTATCCTGAACAAGCAAAACTGTTTGGGACTCACTGCCTTCAGGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAACCCTCTCTGTATTTTaGCTCTTTGGCTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSTLSVF*LFGFLT
Trigger: AGTGAGAAAGCCAAAGAGTCAAAATACAGAGAGGGT...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTTATGTGTGGAGGGTTaGATTATGTCCCCACAAAAA +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICLCVEG*IMSPQK
Trigger: TTTTTGTGGGGACATAATTCAACCCTCCACACATAA...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGACCCATTTGCCCAATaGCCAATGGATGTGAAGATA +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIDPFAQ*PMDVKI
Trigger: TATCTTCACATCCATTGGGCATTGGGCAAATGGGTC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAATCCCAAAAGCTGAATaGAACAAGTCAACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSIPKAE*NKSTAV
Trigger: CACTGCTGTTGACTTGTTGCATTCAGCTTTTGGGAT...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTAGTTACAGCCTGTTCTaGTTCCAATATCCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICSYSLF*FQYPKN
Trigger: ATTCTTCGGATATTGGAACCAGAACAGGCTGTAACT...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGACCAACCTCAAATATaGACCTCAGTTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIDQPQI*TSVLPG
Trigger: ACCAGGAAGAACTGAGGTCCATATTTGAGGTTGGTC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp TTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGAAGTCATTCATCACAATaGTCTGCAGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FQHTSAPNHTVLPNMNIGSHSSQ*SAVIPA
Trigger: AGCTGGGATTACTGCAGACCATTGTGATGAATGACT...TCCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563188.5
CDS-3UTR CCA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATTACAGGAAGGACACGTaGCATTTTAACAAATCATTT +
Preference number: 4 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDYRKDT*HFNKSF
Trigger: AAATGATTTGTTAAAATGCCACGTGTCCTTCCTGTA...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568272.1
3UTR CAA 72 bp CCTCCAGCAATCAGTTGTGACAACCCATGTGCAATGTaGTATACAAGGGAAGCTCATTACAGACTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PPAISCDNPCAM*YTREAHYRLSV
Trigger: AACACTGAGTCTGTAATGAGCTTCCCTTGTATACAACATTGCACATGGGTTGTCACAACTGATTGCTGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATACTCACAACAAACCATTaGGAACTTTGGGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIILTTNH*ELWEFP
Trigger: TGGAAACTCCCAAAGTTCTCAATGGTTTGTTGTGAG...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACAAAACAAGGAAGGGTaGTTTCTCCATCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSQNKEG*FLHLLF
Trigger: AAACAAGAGATGGAGAAATCACCCTTCCTTGTTTTG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTCTGTACCTCAAAATGTaGGTATATTTGAAGATAGGC +
Preference number: 4 (lower is better)
Translates to: LASWALFVWQVLNPRLICLYLKM*VYLKIG
Trigger: GCCTATCTTCAAATATACTCACATTTTGAGGTACAG...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAACACATATGAAAATCTaGCTCCCAGAAGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIITHMKI*LPEGKQ
Trigger: CTGCTTTCCTTCTGGGAGTCAGATTTTCATATGTGT...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAAAACCACACCCAGATTaGGAAAGGGAACATGACAAA +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIKPHPD*EREHDK
Trigger: TTTGTCATGTTCCCTTTCTCAATCTGGGTGTGGTTT...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCACTTATAATGAGATTCTaGAAGGACAGCACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSLIMRF*KDSTPN
Trigger: ATTTGGAGTGCTGTCCTTGCAGAATCTCATTATAAG...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGCTCACCTCATCCTCTaGCTAACACATATGAAAATC +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIAHLIL*LTHMKI
Trigger: GATTTTCATATGTGTTAGGCAGAGGATGAGGTGAGC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATATCCATCTCTTGTTTGTaGCGGACTGATTATAAAGGG +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIISISCL*RTDYKG
Trigger: CCCTTTATAATCAGTCCGCCACAAACAAGAGATGGA...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCATTAGATGTGTGGCATTaGGCAAATTTACTTAACCTC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSLDVWH*ANLLNL
Trigger: GAGGTTAAGTAAATTTGCCCAATGCCACACATCTAA...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAATTGGTAATTATGTGTaGAGGGTTGAATTATGTCCC +
Preference number: 4 (lower is better)
Translates to: ASWALFVWQVLNPRLICSIGNYV*RVELCP
Trigger: GGGACATAATTCAACCCTCCACACATAATTACCAAT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp TCAAATGCTAGCTCCTCCATCACTAGCTGTATGACCTaGGGAAAGTACTTAATCTCTCTGTGCCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: SNASSSITSCMT*GKYLISLCLNF
Trigger: GAAATTGAGGCACAGAGAGATTAAGTACTTTCCCAAGGTCATACAGCTAGTGATGGAGGAGCTAGCATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAAGTCCATCTCCTTATTaGGGCTTCTTTACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIISPSPY*GFFTAK
Trigger: TTTTGCTGTAAAGAAGCCTCAATAAGGAGATGGACT...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR GCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAATCCAGGAGATGATGTaGCTATTTCCTAAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIIQEMM*LFPKVL
Trigger: AAGAACCTTAGGAAATAGGCACATCATCTCCTGGAT...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATACCATGTCTCTTATCTTaGATGGTTTTCATCTGCATG +
Preference number: 4 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIPCLLS*MVFICM
Trigger: CATGCAGATGAAAACCATCCAAGATAAGAGACATGG...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAAAGTCACTCAGTTTGTaGTACTTTGTTATGGTATCC +
Preference number: 4 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSKSLSL*YFVMVS
Trigger: GGATACCATAACAAAGTACCACAAACTGAGTGACTT...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp AGAGGACATGGAACTCACAACAAACCATTGAGAACTTaGGGAGTTTCCAAATTCGAACTGGAAGGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: RGHGTHNKPLRT*GVSKFELEGKK
Trigger: TTTCTTCCCTTCCAGTTCGAATTTGGAAACTCCCAAAGTTCTCAATGGTTTGTTGTGAGTTCCATGTCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp GATGCTTGTTATATGTTAGGTAGCATTTCTAGGTACTTTGTACAGGTGAATTTCCAATCTGTGCTGCGTTaGCCACACAATCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: DACYMLGSISRYFVQVNFQSVLR*PHNLPQ
Trigger: TTGAGGAAGATTGTGTGGTCAACGCAGCACAGATTG...GAAATTCACCTGTACAAAGTACCTAGAAATGCTACCTAACATATAACAAGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568589.5
CDS-3UTR GCA 90 bp GATGCTTGTTATATGTTAGGTAGCATTTCTAGGTACTTTGTACAGGTGAATTTCGACTTTGTTCCCAGATaGCGTCTCGATGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: DACYMLGSISRYFVQVNFDFVPR*RLDVLR
Trigger: TCTGAGTACATCGAGACGGCATCTGGGAACAAAGTC...GAAATTCACCTGTACAAAGTACCTAGAAATGCTACCTAACATATAACAAGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568589.5
3UTR CAA 72 bp TACAAAACAAGGAAGGGTGATTTCTCCATCTCTTGTTaGTGGCGGACTGATTATAAAGGGCAAGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: YKTRKGDFSISC*WRTDYKGQDVL
Trigger: TAAAACATCTTGCCCTTTATAATCAGTCCGCCACAAACAAGAGATGGAGAAATCACCCTTCCTTGTTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR TCA 90 bp AGCTCTATCAACATATTGCCAGAGATAGGAATCGTAAGCATTACTTTTGCGATGGGTACTTTGTACAGGTaGATTTCTAAGTTAGCTCTA +
Preference number: 4 (lower is better)
Translates to: SSINILPEIGIVSITFAMGTLYR*ISKLAL
Trigger: TAGAGCTAACTTAGAAATTCACCTGTACAAAGTACC...CATCGCAAAAGTAATGCTTACGATTCCTATCTCTGGCAATATGTTGATAGAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568589.5
3UTR CAA 72 bp AAAGACATTCAGAAATTGGTAATTATGTGTGGAGGGTaGAATTATGTCCCCACAAAAATTCATGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: KDIQKLVIMCGG*NYVPTKIHAEA
Trigger: GGCTTCAGCATGAATTTTTGTGGGGACATAATTCAACCCTCCACACATAATTACCAATTTCTGAATGTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
3UTR CAA 72 bp GTTTTTATGCAACTTAACCAGAAAGACATTCAGAAATaGGTAATTATGTGTGGAGGGTTGAATTATGTCCCC +
Preference number: 4 (lower is better)
Translates to: VFMQLNQKDIQK*VIMCGGLNYVP
Trigger: GGGGACATAATTCAACCCTCCACACATAATTACCAATTTCTGAATGTCTTTCTGGTTAAGTTGCATAAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CCA 90 bp ATCAACATATTGCCAGAGATAGGAATCGTAAGCATTACTTTTGCGATGGAAAATTTTCCTCTTTGTGTTTaGCCCTTCATAATTTCCTTA +
Preference number: 4 (lower is better)
Translates to: INILPEIGIVSITFAMENFPLCV*PFIISL
Trigger: TAAGGAAATTATGAAGGGCCAAACACAAAGAGGAAA...ATTTTCCATCGCAAAAGTAATGCTTACGATTCCTATCTCTGGCAATATGTTGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568589.5
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACACCCACCTGCACACTaGCCTCTTGGGCCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEHPPAH*PLGPCL
Trigger: CAAACAAGGCCCAAGAGGCAAGTGTGCAGGTGGGTG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAAAGCCAAGGGCCAGCCTaGCAAACAGGCCTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGESQGPA*QTGLLS
Trigger: AGAAAGCAGGCCTGTTTGCAAGGCTGGCCCTTGGCT...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACTGCACACTTGCCTCTaGGGCCTTGTTTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGELHTCL*GLVCLA
Trigger: TGCCAGACAAACAAGGCCCAAGAGGCAAGTGTGCAG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATCATGGACCAGCCCCTaGCCTGGCCTGGACCAGCTG +
Preference number: 5 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSSWTSP*PGLDQL
Trigger: CAGCTGGTCCAGGCCAGGCAAGGGGCTGGTCCATGA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGAGACAGATCCCTGTTaGGAGTCCTGGGATGCAGCC +
Preference number: 5 (lower is better)
Translates to: STSSCFSSAAVKACCMARETDPC*ESWDAA
Trigger: GGCTGCATCCCAGGACTCCAAACAGGGATCTGTCTC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAATGTTCAGGGTTCTCATaGGGAGCTGCTCACCTCATC +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGECSGFS*GAAHLI
Trigger: GATGAGGTGAGCAGCTCCCAATGAGAACCCTGAACA...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAATTACAGCCTCCTTTGTaGCTAACTGTGGCCACATGG +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGELQPPL*LTVATW
Trigger: CCATGTGGCCACAGTTAGCAACAAAGGAGGCTGTAA...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGGACCTAGGAAGTGCTaGGCACCTAGTAGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: STSSCFSSAAVKACCMARGPRKC*APSSGL
Trigger: CAAGCCACTACTAGGTGCCAAGCACTTCCTAGGTCC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CTTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGGCCGAGATCGCGCCATaGCACTCCAGCCTTGCCATT +
Preference number: 5 (lower is better)
Translates to: LSTHIGAQSHSSSQHEHRAEIAP*HSSLAI
Trigger: AATGGCAAGGCTGGAGTGCAATGGCGCGATCTCGGC...CCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563188.5
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAATCCTTCCTCAGAGTTTaGGCTGCCCAAGTAGAAACT +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGESFLRV*AAQVET
Trigger: AGTTTCTACTTGGGCAGCCAAAACTCTGAGGAAGGA...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGGCCACAATGATGACTaGAGGCTGGATACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: STSSCFSSAAVKACCMARGHNDD*RLDTFL
Trigger: GAGGAAGGTATCCAGCCTCAAGTCATCATTGTGGCC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAAACCAGCCAGCTGGATTaGACTACCTATAGTCACCAT +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGETSQLD*TTYSHH
Trigger: ATGGTGACTATAGGTAGTCAAATCCAGCTGGCTGGT...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAGGAGGCCAAGATCGCTaGAGCCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: ASWALFVWQVLNPRLICSGGQDR*SPGVQD
Trigger: GTCTTGAACTCCTGGGCTCAAGCGATCTTGGCCTCC...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAAAGTTGGCGAGACATTTaGCTGAGACCAGTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGESWRDI*LRPVLK
Trigger: TTTCAGAACTGGTCTCAGCAAAATGTCTCGCCAACT...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATATGCAGTGGCGTGATCTaGGCTCACTGCAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIICSGVI*AHCSLH
Trigger: GTGGAGGCTGCAGTGAGCCAAGATCACGCCACTGCA...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS CCA 90 bp GTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATTaGTCACATTCTCCAATTCACCAGGCCCCACCACTCTCTATTGTT +
Preference number: 5 (lower is better)
Translates to: VGLYSHTVTTSLGLD*SHSPIHQAPPLSIV
Trigger: AACAATAGAGAGTGGTGGGGCCTGGTGAATTGGAGAATGTGACCAATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAATTCATCACAATGGTCTaGCCATTGAGAACGATGTTC +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEFITMV*PLRTMF
Trigger: GAACATCGTTCTCAATGGCAAGACCATTGTGATGAA...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAATCCCATCACCTTGTTTaGGATGAAGAAAAGGTCATG +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGESHHLV*DEEKVM
Trigger: CATGACCTTTTCTTCATCCAAAACAAGGTGATGGGA...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAACAGTCCATCTCCTTATaGAGGCTTCTTTACAGCAAA +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEQSISL*RLLYSK
Trigger: TTTGCTGTAAAGAAGCCTCAATAAGGAGATGGACTG...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATCCCCACCACTCTCTATaGTTCACACTCAGTCTTACT +
Preference number: 5 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDPHHSL*FTLSLT
Trigger: AGTAAGACTGAGTGTGAACAATAGAGAGTGGTGGGG...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR CAA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATATGGACAGCTGATGCTTaGTCCTGCCCAGCACCCATT +
Preference number: 5 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIWTADA*SCPAPI
Trigger: AATGGGTGCTGGGCAGGACAAAGCATCAGCTGTCCA...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAGACCCTCTCTGTATTTaGACTCTTTGGCTTTCTCAC +
Preference number: 5 (lower is better)
Translates to: STSSCFSSAAVKACCMARDPLCI*TLWLSH
Trigger: GTGAGAAAGCCAAAGAGTCAAAATACAGAGAGGGTC...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAATCTGCATGACCCATTaGCCCAATGCCCAATGGATG +
Preference number: 5 (lower is better)
Translates to: ASWALFVWQVLNPRLICSICMTH*PNAQWM
Trigger: CATCCATTGGGCATTGGGCAAATGGGTCATGCAGAT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCATCTGAGTCCTGGTCATaGAGCCTGTGCCTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSSESWS*SLCLLS
Trigger: TGAAAGCAGGCACAGGCTCAATGACCAGGACTCAGA...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CTTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGCATTGCACTCCAGCCTaGCCATTGAGAACGATGTTC +
Preference number: 5 (lower is better)
Translates to: LSTHIGAQSHSSSQHEHRHCTPA*PLRTMF
Trigger: GAACATCGTTCTCAATGGCAAGGCTGGAGTGCAATG...CCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563188.5
CDS-3UTR CAA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATCAGCTTGGGCTTAGATaGGTCACATTCTCCAATTCA +
Preference number: 5 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDQLGLR*VTFSNS
Trigger: TGAATTGGAGAATGTGACCAATCTAAGCCCAAGCTG...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR CAA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCACCAATCTGTGCTGCGTaGACCACACAATCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSPICAA*TTQSSS
Trigger: TGAGGAAGATTGTGTGGTCAACGCAGCACAGATTGG...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGACCAATCTGTGCTGCGTaGACCACACAATCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: FQHTSAPNHTVLPNMNIGPICAA*TTQSSS
Trigger: TGAGGAAGATTGTGTGGTCAACGCAGCACAGATTGG...TCCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563188.5
ENST00000566053.5
CDS-3UTR CAA 90 bp AGGAGGATGCAGGTCTGGAGCTATCAGCTGTCATGGCTCCAAATGCACGGCGAAAAACCATTGAGAACTTaGGGAGTTTCCAAATTCGAA +
Preference number: 5 (lower is better)
Translates to: RRMQVWSYQLSWLQMHGEKPLRT*GVSKFE
Trigger: TTCGAATTTGGAAACTCCCAAAGTTCTCAATGGTTT...TTCGCCGTGCATTTGGAGCCATGACAGCTGATAGCTCCAGACCTGCATCCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAACTCACAACAAACCATaGAGAACTTTGGGAGTTTCC +
Preference number: 5 (lower is better)
Translates to: STSSCFSSAAVKACCMARTHNKP*RTLGVS
Trigger: GGAAACTCCCAAAGTTCTCAATGGTTTGTTGTGAGT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGCCAGGCCTGTCCATTaGGTGTATTCCATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIARPVH*VYSIFL
Trigger: CAGGAAGATGGAATACACCAAATGGACAGGCCTGGC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CCAGGTACTGTTTTCAGGGAAGTAAGATGTCCTGTGCCAACTCTTCTCACTTCAAGCAGGTGGCAAAGCTaGAATTCCAACCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: PGTVFREVRCPVPTLLTSSRWQS*NSNPTL
Trigger: CAGAGTTGGGTTGGAATTCAAGCTTTGCCACCTGCT...TGAAGTGAGAAGAGTTGGCACAGGACATCTTACTTCCCTGAAAACAGTACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGAACTCCAGCCTTGCCATaGAGAACGATGTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: FQHTSAPNHTVLPNMNIGTPALP*RTMFWL
Trigger: AAGCCAGAACATCGTTCTCAATGGCAAGGCTGGAGT...TCCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563188.5
CDS-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGAAAGAATGCAACACCTTaGCTGAACTTCTTGAATGGT +
Preference number: 5 (lower is better)
Translates to: STSSCFSSAAVKACCMARKNATP*LNFLNG
Trigger: ACCATTCAAGAAGTTCAGCAAAGGTGTTGCATTCTT...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGACCCAAACAGTTTTGCTaGTTCAGGATACAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: STSSCFSSAAVKACCMARPKQFC*FRIQVD
Trigger: ATCAACTTGTATCCTGAACAAGCAAAACTGTTTGGG...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGAAGGAAAGCAGATGTaGGGCATAACCCACATTGTT +
Preference number: 5 (lower is better)
Translates to: LASWALFVWQVLNPRLICEGKQM*GITHIV
Trigger: AACAATGTGGGTTATGCCCAACATCTGCTTTCCTTC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CTTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGATGCAACACTTGCCATaGAGAACGATGTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: LSTHIGAQSHSSSQHEHRMQHLP*RTMFWL
Trigger: AAGCCAGAACATCGTTCTCAATGGCAAGTGTTGCAT...CCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566053.5
CDS-3UTR CAA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATGAAATGACAAAGTTCTaGCCATTGAGAACGATGTTC +
Preference number: 5 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDEMTKF*PLRTMF
Trigger: GAACATCGTTCTCAATGGCAAGAACTTTGTCATTTC...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR CAA 90 bp TGTTGCCACGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATGATTTCCAGTTGCTTTaGAAAAAGAATCAGACGCTC +
Preference number: 5 (lower is better)
Translates to: CCHVGLYSHTVTTSLGLDDFQLL*KKNQTL
Trigger: GAGCGTCTGATTCTTTTTCAAAAGCAACTGGAAATC...ATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACGTGGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR CAA 90 bp TCTCACAGCTTGGGCTTAGTTTCCTCTTTGTGTTTGGCCCTTCATAATTTCCTTCCAATCTGTGCTGCGTaGACCACACAATCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: SHSLGLVSSLCLALHNFLPICAA*TTQSSS
Trigger: TGAGGAAGATTGTGTGGTCAACGCAGCACAGATTGG...AAGGAAATTATGAAGGGCCAAACACAAAGAGGAAACTAAGCCCAAGCTGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568589.5
CDS-3UTR CAA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATACAGAACGAGGAAATGTaGTGCTATTTGGCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIQNEEM*CYLARR
Trigger: CCTTCTGGCCAAATAGCACAACATTTCCTCGTTCTG...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCATGTCTTCCCATCACCTaGTTTTGGATGAAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: ASWALFVWQVLNPRLICSCLPIT*FWMKKR
Trigger: CCTTTTCTTCATCCAAAACAAGGTGATGGGAAGACA...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAGACAATCATTCACCTTaGTTCCCTGCAGCAGGTATC +
Preference number: 5 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIDNHSP*FPAAGI
Trigger: GATACCTGCTGCAGGGAACAAAGGTGAATGATTGTC...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TCAACAAGCAGCTGCTTTTCTTCAGCAGCAGTGAAGGCATGCTGCATGGCCAGATACAGGCACATGGTTTaGACAGTTGTTTCTGTTATT +
Preference number: 5 (lower is better)
Translates to: STSSCFSSAAVKACCMARYRHMV*TVVSVI
Trigger: AATAACAGAAACAACTGTCAAAACCATGTGCCTGTA...TCTGGCCATGCAGCATGCCTTCACTGCTGCTGAAGAAAAGCAGCTGCTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTCTGTATTTTGACTCTTaGGCTTTCTCACTCACTAAG +
Preference number: 5 (lower is better)
Translates to: LASWALFVWQVLNPRLICLYFDS*AFSLTK
Trigger: CTTAGTGAGTGAGAAAGCCAAAGAGTCAAAATACAG...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTTCTCCATCTCTTGTTaGTGGCGGACTGATTATAAA +
Preference number: 5 (lower is better)
Translates to: LASWALFVWQVLNPRLICFSISC*WRTDYK
Trigger: TTTATAATCAGTCCGCCACAAACAAGAGATGGAGAA...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGGGAGGATTAAATGTTaGCACCCCATAGATACAAAA +
Preference number: 5 (lower is better)
Translates to: LASWALFVWQVLNPRLICGRIKC*HPIDTK
Trigger: TTTTGTATCTATGGGGTGCAAACATTTAATCCTCCC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTACTAGCTGTATGACCTaGGGAAAGTACTTAATCTCT +
Preference number: 5 (lower is better)
Translates to: LASWALFVWQVLNPRLICTSCMT*GKYLIS
Trigger: AGAGATTAAGTACTTTCCCAAGGTCATACAGCTAGT...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TTTCAACACACATCGGCGCCCAATCACACAGTTCTTCCCAACATGAACATAGGAGAAAGAATGCAACACTaGCCATTGAGAACGATGTTC +
Preference number: 5 (lower is better)
Translates to: FQHTSAPNHTVLPNMNIGERMQH*PLRTMF
Trigger: GAACATCGTTCTCAATGGCAAGTGTTGCATTCTTTC...TCCTATGTTCATGTTGGGAAGAACTGTGTGATTGGGCGCCGATGTGTGTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566053.5
CDS-3UTR CAA 90 bp CTTGCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTGAAACTCTCACTTTTTaGACAGTTGGGAGGATTAAA +
Preference number: 5 (lower is better)
Translates to: LASWALFVWQVLNPRLICETLTF*TVGRIK
Trigger: TTTAATCCTCCCAACTGTCAAAAAAGTGAGAGTTTC...ACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATAAAATCCCAGACTCATTaGTTCACTTGCTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIIKSQTH*FTCLLP
Trigger: AGGAAGCAAGCAAGTGAACAAATGAGTCTGGGATTT...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp GCCTCTTGGGCCTTGTTTGTCTGGCAAGTCCTAAATCCCAGACTCATTTGTTCAAAAGACATTCAGAAATaGGTAATTATGTGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: ASWALFVWQVLNPRLICSKDIQK*VIMCGG
Trigger: CCCTCCACACATAATTACCAATTTCTGAATGTCTTT...TGAACAAATGAGTCTGGGATTTAGGACTTGCCAGACAAACAAGGCCCAAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS TCA 90 bp AGTCTTACTGACTCATCTGATCTCTTTCTATCCCTGCAGGCACTGTaGCATCTGATATATGGGCTCAGGAAAACAGAAATGACAAAGTTC +
Preference number: 5 (lower is better)
Translates to: SLTDSSDLFLSLQAL*HLIYGLRKTEMTKF
Trigger: GAACTTTGTCATTTCTGTTTTCCTGAGCCCATATATCAGATGTCACAGTGCCTGCAGGGATAGAAAGAGATCAGATGAGTCAGTAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS-3UTR CAA 90 bp AACCATAAGGATGCAGTTCCATGGCCCAGTCAGCTCATCTGGGGAAAAATAATATTAGGATCTGAGAATTaGAGATTCTCAACAAGCAGC +
Preference number: 5 (lower is better)
Translates to: NHKDAVPWPSQLIWGKIILGSEN*RFSTSS
Trigger: GCTGCTTGTTGAGAATCTCAAATTCTCAGATCCTAA...TATTATTTTTCCCCAGATGAGCTGACTGGGCCATGGAACTGCATCCTTATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300087.7
CDS-3UTR CAA 90 bp TCTCACAGCTTGGGCTTAGTTTCCTCTTTGTGTTTGGCCCTTCATAATTTCCTTGGCTTAGTTTCCTCTTaGTGTTTGGCCCTTCATAAT +
Preference number: 5 (lower is better)
Translates to: SHSLGLVSSLCLALHNFLGLVSS*CLALHN
Trigger: ATTATGAAGGGCCAAACACAAAGAGGAAACTAAGCC...AAGGAAATTATGAAGGGCCAAACACAAAGAGGAAACTAAGCCCAAGCTGTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568589.5
CDS-3UTR CAA 90 bp AGCTCTATCAACATATTGCCAGAGATAGGAATCGTAAGCATTACTTTTGCGATGTTCATCACAATGGTCTaGCCATTGAGAACGATGTTC +
Preference number: 5 (lower is better)
Translates to: SSINILPEIGIVSITFAMFITMV*PLRTMF
Trigger: GAACATCGTTCTCAATGGCAAGACCATTGTGATGAA...CATCGCAAAAGTAATGCTTACGATTCCTATCTCTGGCAATATGTTGATAGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568589.5
CDS-3UTR CAA 90 bp GATGCTTGTTATATGTTAGGTAGCATTTCTAGGTACTTTGTACAGGTGAATTTCAAGAATGCAACACCTTaGCTGAACTTCTTGAATGGT +
Preference number: 5 (lower is better)
Translates to: DACYMLGSISRYFVQVNFKNATP*LNFLNG
Trigger: ACCATTCAAGAAGTTCAGCAAAGGTGTTGCATTCTT...GAAATTCACCTGTACAAAGTACCTAGAAATGCTACCTAACATATAACAAGCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568589.5
CDS-3UTR CAA 90 bp GATGCTTGTTATATGTTAGGTAGCATTTCTAGGTACTTTGTACAGGTGAATTTCGTTTCCTCTTTGTGTTaGGCCCTTCATAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: DACYMLGSISRYFVQVNFVSSLC*ALHNFL
Trigger: AAGGAAATTATGAAGGGCCAAACACAAAGAGGAAAC...GAAATTCACCTGTACAAAGTACCTAGAAATGCTACCTAACATATAACAAGCATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568589.5
CDS CAA 90 bp CGTGGGCCTGTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATaGGTCACATTCTCCAATTCACCAGGCCCCACCACTCTCTATTGT +
Preference number: 6 (lower is better)
Translates to: RGPVFPHSNNQLGLR*VTFSNSPGPTTLYC
Trigger: ACAATAGAGAGTGGTGGGGCCTGGTGAATTGGAGAATGTGACCAATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATACAGGCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS CAA 72 bp GTATTCCCACACAGTAACAACCAGCTTGGGCTTAGATaGGTCACATTCTCCAATTCACCAGGCCCCACCACT +
Preference number: 6 (lower is better)
Translates to: VFPHSNNQLGLR*VTFSNSPGPTT
Trigger: AGTGGTGGGGCCTGGTGAATTGGAGAATGTGACCAATCTAAGCCCAAGCTGGTTGTTACTGTGTGGGAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS CAA 72 bp CACATTCTCCAATTCACCAGGCCCCACCACTCTCTATaGTTCACACTCAGTCTTACTGACTCATCTGATCTC +
Preference number: 6 (lower is better)
Translates to: HILQFTRPHHSL*FTLSLTDSSDL
Trigger: GAGATCAGATGAGTCAGTAAGACTGAGTGTGAACAATAGAGAGTGGTGGGGCCTGGTGAATTGGAGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS TCA 72 bp GACTCATCTGATCTCTTTCTATCCCTGCAGGCACTGTaGCATCTGATATATGGGCTCAGGAAAACAGAAATG +
Preference number: 6 (lower is better)
Translates to: DSSDLFLSLQAL*HLIYGLRKTEM
Trigger: CATTTCTGTTTTCCTGAGCCCATATATCAGATGTCACAGTGCCTGCAGGGATAGAAAGAGATCAGATGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568272.1
CDS CCA 72 bp AACGGAAAACCGGGGAAAGCAAACTTAATAGGTTTCTaGACTACAGGTTTCCATCAAGAAAGCTCCCATTTG +
Preference number: 6 (lower is better)
Translates to: NGKPGKANLIGF*TTGFHQESSHL
Trigger: CAAATGGGAGCTTTCTTGATGGAAACCTGTAGTCCAGAAACCTATTAAGTTTGCTTTCCCCGGTTTTCCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566298.1