RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCTN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000137100

Ensembl transcript IDs: ENST00000259632.12, ENST00000341694.6, ENST00000378911.3, ENST00000378913.6, ENST00000378916.8, ENST00000421919.5, ENST00000472074.1, ENST00000472418.5, ENST00000477738.6, ENST00000479399.5, ENST00000481438.1

Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTaGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGT +
Preference number: 1 (lower is better)
Translates to: AGWHRALEPDCPGPL*DGEQLSLLCWLHLR
Trigger: ACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTaGCCAGGCCCACTTTGGGATGGGGAGCAGCTATCACTCCTCTGC +
Preference number: 1 (lower is better)
Translates to: CLVTKAGWHRALEPD*PGPLWDGEQLSLLC
Trigger: GCAGAGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR CCA 90 bp TTGGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTaGCGGCCTCTAGCTGGCAAAGTAGCTCATCCCACTGCACGAATT +
Preference number: 1 (lower is better)
Translates to: LGWGAAITPLLASLA*RPLAGKVAHPTARI
Trigger: AATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR CCA 90 bp AGCTATCACTCCTCTGCTGGCTTCACTTGCGTGGCGGCCTCTAGCTaGCAAAGTAGCTCATCCCACTGCACGAATTGCTTGGAGAGAAGC +
Preference number: 1 (lower is better)
Translates to: SYHSSAGFTCVAASS*QSSSSHCTNCLERS
Trigger: GCTTCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR GCA 90 bp AAAGGAGCAAATGGCTATGGGAGCACTTTCAGGCTCCAGGATGGGTaGCCTAACAGCAGTCCAAAGACGGATGGAAAAGGGAGTGGCCAT +
Preference number: 1 (lower is better)
Translates to: KGANGYGSTFRLQDG*PNSSPKTDGKGSGH
Trigger: ATGGCCACTCCCTTTTCCATCCGTCTTTGGACTGCTGTTAGGGCACCCATCCTGGAGCCTGAAAGTGCTCCCATAGCCATTTGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR GCA 90 bp TTCACTTGCGTGGCGGCCTCTAGCTGGCAAAGTAGCTCATCCCACTaGACGAATTGCTTGGAGAGAAGCATTGTAGTCTTGTTGTATTCC +
Preference number: 1 (lower is better)
Translates to: FTCVAASSWQSSSSH*TNCLERSIVVLLYS
Trigger: GGAATACAACAAGACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCACGCAAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR GCA 90 bp TTGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCAATAAAGTCCTaGTCTGGAAGCAGAAAGTTTGTACATGAACCTAGGCAAGTCCCT +
Preference number: 1 (lower is better)
Translates to: LGTSQPQPYGVPIKS*SGSRKFVHEPRQVP
Trigger: AGGGACTTGCCTAGGTTCATGTACAAACTTTCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR CCA 90 bp ATACCATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTTATaGTGTCCCAATAAAGTCCTGCTCTGGAAGCAGAAAGTTTGTACA +
Preference number: 1 (lower is better)
Translates to: IPSPGILGYLPASTL*CPNKVLLWKQKVCT
Trigger: TGTACAAACTTTCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR-3UTR GCA 90 bp GCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGCTATCACTCTCTGCTGGCTTCACTTaGGTGGCGGCCTCTAGCTGG +
Preference number: 2 (lower is better)
Translates to: ALEPDCPGPLWDGEQLSLSAGFT*VAASSW
Trigger: CCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGA...GAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR-3UTR CCA 90 bp GCCCACTTTGGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTGGTTGGCATAGGGCCCTaGAGCCTGACTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: AHFGMGSSYHSSAGFTCVVGIGP*SLTAQA
Trigger: GGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAAC...CACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR-3UTR CCA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGCTATCACTCCTCTGCTaGCTTCACTTGCGTGGCGGC +
Preference number: 2 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMLSLLC*LHLRGG
Trigger: GCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAG...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR-3UTR CCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCGTGGCGGCCTCTAGCTaGCAAAGTAGCTCATCCCAC +
Preference number: 2 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGVAASS*QSSSSH
Trigger: GTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCAC...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR-3UTR CCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGTTGGCATAGGGCCCTaGAGCCTGACTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWVGIGP*SLTAQA
Trigger: GGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAAC...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR-3UTR TCA 90 bp AGGATGGGTGCCCTAACAGCAGTCCAAAGACGGATGGAAAAGGGAGTGGCCATATGGCATGAGTTGGGATaGGGTGCTGCGCCACCTCCA +
Preference number: 2 (lower is better)
Translates to: RMGALTAVQRRMEKGVAIWHELG*GAAPPP
Trigger: TGGAGGTGGCGCAGCACCTCATCCCAACTCATGCCA...TATGGCCACTCCCTTTTCCATCCGTCTTTGGACTGCTGTTAGGGCACCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR-3UTR GCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCCTGGAGCCTGACTaGCCAGGCCCACTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWALEPD*PGPLWD
Trigger: ATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGC...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR-3UTR TCA 90 bp CAGTCAATGACATACCATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTCTTCCCCAGGTGGCATaGGTTGGGATGAGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: QSMTYHPQEFLGTSQPQPLPQVA*VGMRCC
Trigger: GCAGCACCTCATCCCAACTCATGCCACCTGGGGAAG...AGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR-3UTR CCA 90 bp GAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGTTGGCATAGGGCCCTaGAGCCTGACTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: EGGCCKLQTSGNLTSNFRVGIGP*SLTAQA
Trigger: GGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAAC...TCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
3UTR-3UTR CCA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCGTAACAAAGGCAGGTTaGCATAGGGCCCTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAVTKAG*HRALEP
Trigger: AGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTAC...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR-3UTR CCA 90 bp CTCTACCCACAGTCAATGACATACCATCCCCAGGAATTCTTGGGTACCTCCCAGCCAGGTGGCATGAGTTaGGATGAGGTGCTGCGCCAC +
Preference number: 2 (lower is better)
Translates to: LYPQSMTYHPQEFLGTSQPGGMS*DEVLRH
Trigger: GTGGCGCAGCACCTCATCCCAACTCATGCCACCTGG...CTGGGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTGTGGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR-3UTR GCA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATGCCCTGGAGCCTGACTaGCCAGGCCCACTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: TSNFRAQSTERWALKPINALEPD*PGPLWD
Trigger: ATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGC...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR-3UTR GCA 90 bp TGCCCAGGCCCACTTTGGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTCCCACTGCACGAATTaGTTGGAGAGAAGCATTGTA +
Preference number: 2 (lower is better)
Translates to: CPGPLWDGEQLSLLCWLHSHCTN*LERSIV
Trigger: TACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGA...GTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR-3UTR TCA 90 bp GCACTTTCAGGCTCCAGGATGGGTGCCCTAACAGCAGTCCAAAGACGGATGGAACCCCAAAGTTTCTGCTaGGGTTACAACAGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: ALSGSRMGALTAVQRRMEPQSFC*GYNRKA
Trigger: GGCCTTTCTGTTGTAACCTCAGCAGAAACTTTGGGG...TTCCATCCGTCTTTGGACTGCTGTTAGGGCACCCATCCTGGAGCCTGAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR-3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCATACAAAGCTTCCTCTaGCTTGTAACAAAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGIQSFL*LVTKAG
Trigger: ACCTGCCTTTGTTACAAGGCAGAGGAAGCTTTGTAT...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR-3UTR GCA 90 bp TCCCAGCCTCAACCTTATGGTGTCCCAATAAAGTCCTGCTCTGGAAGCAGAAAGGTTGGGATGAGGTGCTaGGCCACCTCCATCTTCGCT +
Preference number: 2 (lower is better)
Translates to: SQPQPYGVPIKSCSGSRKVGMRC*ATSIFA
Trigger: AGCGAAGATGGAGGTGGCGCAGCACCTCATCCCAAC...CTTTCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR-3UTR CCA 90 bp AACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAGGTTGGCATAGGGCCCTaGAGCCTGACTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: NFRAQSTERWALKPINTKVGIGP*SLTAQA
Trigger: GGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAAC...CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR CAA 90 bp GAGCCCCTCTACCCACAGTCAATGACATACCATCCCCAGGAATTCTaGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCAATAAAGTCC +
Preference number: 2 (lower is better)
Translates to: EPLYPQSMTYHPQEF*GTSQPQPYGVPIKS
Trigger: GGACTTTATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTGTGGGTAGAGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR-3UTR TCA 90 bp TCCCAGCCTCAACCTTATGGTGTCCCAATAAAGTCCTGCTCTGGAAGCAGAAAGTACAACAGAAAGGCCTaGAGCTGCTTCCCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: SQPQPYGVPIKSCSGSRKYNRKA*SCFPRW
Trigger: CCACCTGGGGAAGCAGCTTCAGGCCTTTCTGTTGTA...CTTTCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR-3UTR CCA 90 bp GAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGACTGGCTTCACTTGCGTaGCGGCCTCTAGCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: EGGCCKLQTSGNLTSNFRLASLA*RPLAGK
Trigger: TTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAG...TCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR-3UTR GCA 90 bp GGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGGGGGAGGGTGGGTGTTaGAAATTGCAAACCTCAGGT +
Preference number: 2 (lower is better)
Translates to: GCCKLQTSGNLTSNFRAQGEGGC*KLQTSG
Trigger: ACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC...CTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
3UTR-3UTR TCA 90 bp GGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAAACCTCAGGTAACCTaGCCTCCAACTTTAGAGCCC +
Preference number: 2 (lower is better)
Translates to: GCCKLQTSGNLTSNFRAQKPQVT*PPTLEP
Trigger: GGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTT...CTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR-3UTR GCA 90 bp TCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGATACAAAGCTTCCTCTaGCTTGTAACAAAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: SGNLTSNFRAQSTERWALIQSFL*LVTKAG
Trigger: ACCTGCCTTTGTTACAAGGCAGAGGAAGCTTTGTAT...CAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR CAA 90 bp AACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTaGAAGCCAATAAATACAAAGCTTCCTCTGCCTTGTAACAAAGGC +
Preference number: 2 (lower is better)
Translates to: NLTSNFRAQSTERWA*KPINTKLPLPCNKG
Trigger: GCCTTTGTTACAAGGCAGAGGAAGCTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR-3UTR TCA 90 bp AACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAGAAACCTCAGGTAACCTaGCCTCCAACTTTAGAGCCC +
Preference number: 2 (lower is better)
Translates to: NFRAQSTERWALKPINTKKPQVT*PPTLEP
Trigger: GGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTT...CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR-3UTR GCA 90 bp AACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAGATACAAAGCTTCCTCTaGCTTGTAACAAAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: NFRAQSTERWALKPINTKIQSFL*LVTKAG
Trigger: ACCTGCCTTTGTTACAAGGCAGAGGAAGCTTTGTAT...CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
3UTR CCA 72 bp CATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTaGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTT +
Preference number: 3 (lower is better)
Translates to: HRALEPDCPGPL*DGEQLSLLCWL
Trigger: AAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR CCA 72 bp GAAAGGCCTGAAGCTGCTTCCCCAGGTGGCATGAGTTaGGATGAGGTGCTGCGCCACCTCCATCTTCGCTTC +
Preference number: 3 (lower is better)
Translates to: ERPEAASPGGMS*DEVLRHLHLRF
Trigger: GAAGCGAAGATGGAGGTGGCGCAGCACCTCATCCCAACTCATGCCACCTGGGGAAGCAGCTTCAGGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR TCA 72 bp CAACAGAAAGGCCTGAAGCTGCTTCCCCAGGTGGCATaGGTTGGGATGAGGTGCTGCGCCACCTCCATCTTC +
Preference number: 3 (lower is better)
Translates to: QQKGLKLLPQVA*VGMRCCATSIF
Trigger: GAAGATGGAGGTGGCGCAGCACCTCATCCCAACTCATGCCACCTGGGGAAGCAGCTTCAGGCCTTTCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR CCA 72 bp GGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTaGCGGCCTCTAGCTGGCAAAGTAGCTCATCCCACT +
Preference number: 3 (lower is better)
Translates to: GAAITPLLASLA*RPLAGKVAHPT
Trigger: AGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR CCA 72 bp TCCTCTGCTGGCTTCACTTGCGTGGCGGCCTCTAGCTaGCAAAGTAGCTCATCCCACTGCACGAATTGCTTG +
Preference number: 3 (lower is better)
Translates to: SSAGFTCVAASS*QSSSSHCTNCL
Trigger: CAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR-3UTR CAA 90 bp TGCCCAGGCCCACTTTGGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACCACTGCACGAATTGCTaGGAGAGAAGCATTGTAGTC +
Preference number: 3 (lower is better)
Translates to: CPGPLWDGEQLSLLCWLHHCTNC*ERSIVV
Trigger: GACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTG...GTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR-3UTR CAA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGGGGGAGGGTGGGTGTaGCAAATTGCAAACCTCAGG +
Preference number: 3 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWGGGWV*QIANLR
Trigger: CCTGAGGTTTGCAATTTGCAACACCCACCCTCCCCC...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
3UTR GCA 72 bp GTGGCGGCCTCTAGCTGGCAAAGTAGCTCATCCCACTaGACGAATTGCTTGGAGAGAAGCATTGTAGTCTTG +
Preference number: 3 (lower is better)
Translates to: VAASSWQSSSSH*TNCLERSIVVL
Trigger: CAAGACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR-3UTR CAA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCATCCCACTGCACGAATaGCTTGGAGAGAAGCATTGT +
Preference number: 3 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAIPLHE*LGEKHC
Trigger: ACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGAT...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
3UTR-3UTR CAA 90 bp AGGATGGGTGCCCTAACAGCAGTCCAAAGACGGATGGAAAAGGGAGTGGCCATACTGGAAGCAGAAAGTTaGTACATGAACCTAGGCAAG +
Preference number: 3 (lower is better)
Translates to: RMGALTAVQRRMEKGVAILEAES*YMNLGK
Trigger: CTTGCCTAGGTTCATGTACAAACTTTCTGCTTCCAG...TATGGCCACTCCCTTTTCCATCCGTCTTTGGACTGCTGTTAGGGCACCCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR TCA 72 bp AGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTaGCCTCCAACTTTAGAGCCCAGAGTACAGAGAGGT +
Preference number: 3 (lower is better)
Translates to: RVGVANCKPQVT*PPTLEPRVQRG
Trigger: ACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
3UTR CCA 72 bp CCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTTATaGTGTCCCAATAAAGTCCTGCTCTGGAAGCAGAAA +
Preference number: 3 (lower is better)
Translates to: PGILGYLPASTL*CPNKVLLWKQK
Trigger: TTTCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR-3UTR CAA 90 bp GAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAACAGAGAGGTGGGCCTaGAAGCCAATAAATACAAAG +
Preference number: 3 (lower is better)
Translates to: EGGCCKLQTSGNLTSNFRTERWA*KPINTK
Trigger: CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGT...TCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
3UTR GCA 72 bp TCCCAGCCTCAACCTTATGGTGTCCCAATAAAGTCCTaGTCTGGAAGCAGAAAGTTTGTACATGAACCTAGG +
Preference number: 3 (lower is better)
Translates to: SQPQPYGVPIKS*SGSRKFVHEPR
Trigger: CCTAGGTTCATGTACAAACTTTCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR GCA 72 bp TCTAGCTGGCAAAGTAGCTCATCCCACTGCACGAATTaGTTGGAGAGAAGCATTGTAGTCTTGTTGTATTCC +
Preference number: 3 (lower is better)
Translates to: SSWQSSSSHCTN*LERSIVVLLYS
Trigger: GGAATACAACAAGACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR CCA 90 bp CAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGGTTGGCATAGGGCCCTaGAGCCTGACTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QVGIGPWSLTAQAHFGMGVGIGP*SLTAQA
Trigger: GGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAAC...CCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp CAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATCTGGGCCAAGCGCTaGAGGCGGGCAGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: QRQVGIGPWSLTAQAHFGIWAKR*RRAACS
Trigger: TGAGCATGCTGCCCGCCTGCAGCGCTTGGCCCAGAT...CCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp CAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGGCCCTGGAGCCTGACTaGCCAGGCCCACTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: QRQVGIGPWSLTAQAHFGALEPD*PGPLWD
Trigger: ATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGC...CCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp CAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGCACTGGTCCTGCTGCTaGATGTGGATCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QVGIGPWSLTAQAHFGMGHWSCC*MWIWAK
Trigger: CTTGGCCCAGATCCACATTCAGCAGCAGGACCAGTG...CCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000378916.8
ENST00000421919.5
CDS-3UTR GCA 90 bp TGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGTTCCCCAAAGCCACCTaGACCTTGACCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: WHRALEPDCPGPLWDGEQFPKAT*TLTRPS
Trigger: TGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAA...CTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp CAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGTGCAGGCGGGCAGCATaGTCAGGAACGGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: QVGIGPWSLTAQAHFGMGCRRAA*SGTALM
Trigger: CATCAAAGCCGTTCCTGAGCATGCTGCCCGCCTGCA...CCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp CAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGTCTGCTGGCTTCACTTaGGTGGCGGCCTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: QRQVGIGPWSLTAQAHFGSAGFT*VAASSW
Trigger: CCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGA...CCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp TGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGTGCCCAGGCCCACTTTaGGATGGGGAGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: WHRALEPDCPGPLWDGEQCPGPL*DGEQLS
Trigger: TGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCA...CTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp GCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTGGCGGCCTCTAGCTGGCAAACGGGCCTGTAGCCGCTaGAAGTCAGTCAGACCCGCC +
Preference number: 4 (lower is better)
Translates to: AAITPLLASLAWRPLAGKRACSR*KSVRPA
Trigger: GGCGGGTCTGACTGACTTGCAGCGGCTACAGGCCCG...TTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR GCA 90 bp TGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGACCAAGGCATTCACCTaGTCCAGGAGTGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: WHRALEPDCPGPLWDGEQTKAFT*SRSATW
Trigger: CCAGGTTGCACTCCTGGAGCAGGTGAATGCCTTGGT...CTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp CAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGCAGCTATCACTCCTCTaGTGGCTTCACTTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: QVGIGPWSLTAQAHFGMGQLSLL*WLHLRG
Trigger: GCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTG...CCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp TGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGAGGCCCACTTTGGGATaGGGAGCAGCTATCACTCCT +
Preference number: 4 (lower is better)
Translates to: WHRALEPDCPGPLWDGEQRPTLG*GAAITP
Trigger: AGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCT...CTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGTGCCCAGGCCCACTTTaGGATGGGGAGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMCPGPL*DGEQLS
Trigger: TGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCA...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp TGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGGTAACAAAGGCAGGTTaGCATAGGGCCCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: WHRALEPDCPGPLWDGEQVTKAG*HRALEP
Trigger: AGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTAC...CTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGCTCAGGAACGGCTTTaGTGTGAGCACTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMAQERL*CEHCPA
Trigger: TGCTGGACAGTGCTCACATCAAAGCCGTTCCTGAGC...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR TCA 90 bp TGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGCCTTGGACTCCTCAGTaGTTTCCACACACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: WHRALEPDCPGPLWDGEQPWTPQ*FPHTGP
Trigger: AGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGG...CTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR GCA 90 bp GCCCAGGCCCACTTTGGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTCTGCTGGCTTCACTTaGGTGGCGGCCTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AQAHFGMGSSYHSSAGFTSAGFT*VAASSW
Trigger: CCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGA...AGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCTCTGCTGGCTTCACTTaGGTGGCGGCCTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGSAGFT*VAASSW
Trigger: CCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGA...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp GCCCACTTTGGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTGGCCCTGGAGCCTGACTaGCCAGGCCCACTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: AHFGMGSSYHSSAGFTCVALEPD*PGPLWD
Trigger: ATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGC...CACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR GCA 90 bp TGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGGGGGAGGGTGGGTGTTaGAAATTGCAAACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: WHRALEPDCPGPLWDGEQGEGGC*KLQTSG
Trigger: ACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC...CTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CCA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGAGGCCCACTTTGGGATaGGGAGCAGCTATCACTCCT +
Preference number: 4 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMRPTLG*GAAITP
Trigger: AGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCT...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGTAACAAAGGCAGGTTaGCATAGGGCCCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMVTKAG*HRALEP
Trigger: AGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTAC...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp CAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGGTAACAAAGGCAGGTTaGCATAGGGCCCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QRQVGIGPWSLTAQAHFGVTKAG*HRALEP
Trigger: AGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTAC...CCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGCCTTGGACTCCTCAGTaGTTTCCACACACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMPWTPQ*FPHTGP
Trigger: AGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGG...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR GCA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCCGGGCCTGTAGCCGCTaGAAGTCAGTCAGACCCGCC +
Preference number: 4 (lower is better)
Translates to: TSGNLTSNFRAQSTERWARACSR*KSVRPA
Trigger: GGCGGGTCTGACTGACTTGCAGCGGCTACAGGCCCG...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000477738.6
CDS-3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCTTCCCCAAAGCCACCTaGACCTTGACCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGFPKAT*TLTRPS
Trigger: TGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAA...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp CAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGTCACCCTCTCCCTCTTaGTGGAAATGTTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: QVGIGPWSLTAQAHFGMGSPSPS*WKCSPK
Trigger: CTTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGA...CCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCTGCAGGCGGGCAGCATaGTCAGGAACGGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGCRRAA*SGTALM
Trigger: CATCAAAGCCGTTCCTGAGCATGCTGCCCGCCTGCA...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp TGGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTGGCGGCCTCCAGCTATCACTCCTCTaGTGGCTTCACTTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: WDGEQLSLLCWLHLRGGLQLSLL*WLHLRG
Trigger: GCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTG...GAGGCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR CCA 90 bp CTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTGGCTTCACTTGCGTaGCGGCCTCTAGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LVTKAGWHRALEPDCPGPLASLA*RPLAGK
Trigger: TTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAG...TGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp ATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTGGCGGCCTCTAGCCTATCACTCCTCTGCTaGCTTCACTTGCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: MGSSYHSSAGFTCVAASSLSLLC*LHLRGG
Trigger: GCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAG...GCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR CCA 90 bp CTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTATCACTCCTCTGCTaGCTTCACTTGCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LVTKAGWHRALEPDCPGPLSLLC*LHLRGG
Trigger: GCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAG...TGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCAAGCCACCTGCACCTTaGCCAGGCCGTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAKPPAP*PGRQPP
Trigger: AGGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTT...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp CTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCAGCTCAGGAACGGCTTTaGTGTGAGCACTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LVTKAGWHRALEPDCPGPAQERL*CEHCPA
Trigger: TGCTGGACAGTGCTCACATCAAAGCCGTTCCTGAGC...TGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGTCACCCTCTCCCTCTTaGTGGAAATGTTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMSPSPS*WKCSPK
Trigger: CTTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGA...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp CAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGCATCAGGTATGGCAATaGGGTCGATGTACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: QVGIGPWSLTAQAHFGMGHQVWQ*GRCTQD
Trigger: ATCCTGAGTACATCGACCGCATTGCCATACCTGATG...CCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCACCAAGGCATTCACCTaGTCCAGGAGTGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGTKAFT*SRSATW
Trigger: CCAGGTTGCACTCCTGGAGCAGGTGAATGCCTTGGT...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp CAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGTAGCTCATCCCACTaGACGAATTGCTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QVGIGPWSLTAQAHFGMGSSSSH*TNCLER
Trigger: TCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACT...CCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp TGGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTGGCGGCCTCGGGGAGGGTGGGTGTTaGAAATTGCAAACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: WDGEQLSLLCWLHLRGGLGEGGC*KLQTSG
Trigger: ACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC...GAGGCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR GCA 90 bp CAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGGCTGCTAGGATGAATTaGAGCTTAGAGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: QVGIGPWSLTAQAHFGMGAARMN*SLEASG
Trigger: ACCTGATGCCTCTAAGCTGCAATTCATCCTAGCAGC...CCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CCA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGTCCAGGAGTGCAACCTaGGAAAGGATAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMSRSAT*ERINCS
Trigger: GGAGCAGTTTATCCTTTCCCAGGTTGCACTCCTGGA...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR TCA 90 bp GTGGCGGCCTCTAGCTGGCAAAGTAGCTCATCCCACTGCACGAATTGCTTGGAGGGAACGGCTTTGATGTaGGCACTGTCCAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: VAASSWQSSSSHCTNCLEGTALM*ALSSMG
Trigger: GCCCATGCTGGACAGTGCTCACATCAAAGCCGTTCC...CTCCAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR TCA 90 bp CTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACCTTGGACTCCTCAGTaGTTTCCACACACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LVTKAGWHRALEPDCPGPPWTPQ*FPHTGP
Trigger: AGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGG...TGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR TCA 90 bp CCCCAAAGCCAAAGGAGCAAATGGCTATGGGAGCACTTTCAGGCTCCAGGATGGTGGCATGAGTTGGGATaGGGTGCTGCGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PQSQRSKWLWEHFQAPGWWHELG*GAAPPP
Trigger: TGGAGGTGGCGCAGCACCTCATCCCAACTCATGCCA...CCATCCTGGAGCCTGAAAGTGCTCCCATAGCCATTTGCTCCTTTGGCTTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp CTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATACGGGCCTGTAGCCGCTaGAAGTCAGTCAGACCCGCC +
Preference number: 4 (lower is better)
Translates to: LTSNFRAQSTERWALKPIRACSR*KSVRPA
Trigger: GGCGGGTCTGACTGACTTGCAGCGGCTACAGGCCCG...TATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000477738.6
CDS-3UTR GCA 90 bp CCATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCAATATCTGGGCCAAGCGCTaGAGGCGGGCAGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: PSPGILGYLPASTLWCPNIWAKR*RRAACS
Trigger: TGAGCATGCTGCCCGCCTGCAGCGCTTGGCCCAGAT...ATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp TCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGATCTGGGCCAAGCGCTaGAGGCGGGCAGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: SGNLTSNFRAQSTERWALIWAKR*RRAACS
Trigger: TGAGCATGCTGCCCGCCTGCAGCGCTTGGCCCAGAT...CAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp TCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGGCCCTGGAGCCTGACTaGCCAGGCCCACTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SGNLTSNFRAQSTERWALALEPD*PGPLWD
Trigger: ATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGC...CAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCGGGGAGGGTGGGTGTTaGAAATTGCAAACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGGEGGC*KLQTSG
Trigger: ACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR TCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGAAGCCACCTGCACCTTaGCCAGGCCGTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWKPPAP*PGRQPP
Trigger: AGGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTT...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAAGCCACCTGCACCTTaGCCAGGCCGTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFKPPAP*PGRQPP
Trigger: AGGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTT...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR TCA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCGGAACGGCTTTGATGTaGGCACTGTCCAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAGTALM*ALSSMG
Trigger: GCCCATGCTGGACAGTGCTCACATCAAAGCCGTTCC...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR TCA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCCATGGAGCCTGCTGCTaGATGTGGATCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAHGACC*MWIWAK
Trigger: CTTGGCCCAGATCCACATTCAGCAGCAGGCTCCATG...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR GCA 90 bp ATGACGCTTAACCCCAAAGCCAAAGGAGCAAATGGCTATGGGAGCACTTTCAGGCGGGCCTGTAGCCGCTaGAAGTCAGTCAGACCCGCC +
Preference number: 4 (lower is better)
Translates to: MTLNPKAKGANGYGSTFRRACSR*KSVRPA
Trigger: GGCGGGTCTGACTGACTTGCAGCGGCTACAGGCCCG...CCTGAAAGTGCTCCCATAGCCATTTGCTCCTTTGGCTTTGGGGTTAAGCGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCTCACCCTCTCCCTCTTaGTGGAAATGTTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGSPSPS*WKCSPK
Trigger: CTTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGA...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCTCCAGGAGTGCAACCTaGGAAAGGATAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGSRSAT*ERINCS
Trigger: GGAGCAGTTTATCCTTTCCCAGGTTGCACTCCTGGA...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR CCA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCGTGGCGGCCTCTAGCTaGCAAAGTAGCTCATCCCAC +
Preference number: 4 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAVAASS*QSSSSH
Trigger: GTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCAC...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp ATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTGGCGGCCTCTAGCGTGATTTCCACACACTaGTCCTGTAGGGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: MGSSYHSSAGFTCVAASSVISTH*SCRAKV
Trigger: CACTTTGGCCCTACAGGACCAGTGTGTGGAAATCAC...GCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR CCA 90 bp AGGATGGGTGCCCTAACAGCAGTCCAAAGACGGATGGAAAAGGGAGTGGCCATACCAGGTGGCATGAGTTaGGATGAGGTGCTGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RMGALTAVQRRMEKGVAIPGGMS*DEVLRH
Trigger: GTGGCGCAGCACCTCATCCCAACTCATGCCACCTGG...TATGGCCACTCCCTTTTCCATCCGTCTTTGGACTGCTGTTAGGGCACCCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CCA 90 bp CAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGACTGCACGAATTGCTTaGAGAGAAGCATTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: QRQVGIGPWSLTAQAHFGTARIA*REALSG
Trigger: ACCAGACAATGCTTCTCTCCAAGCAATTCGTGCAGT...CCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477738.6
CDS-3UTR TCA 90 bp GGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAAGCCACCTGCACCTTaGCCAGGCCGTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: GCCKLQTSGNLTSNFRAQKPPAP*PGRQPP
Trigger: AGGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTT...CTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp CAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGCAGGATCCAGGTACTTaGTCAGATCTTCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: QVGIGPWSLTAQAHFGMGQDPGT*SDLQSF
Trigger: AAAAGATTGAAGATCTGATCAAGTACCTGGATCCTG...CCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp TCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGTTCCCCAAAGCCACCTaGACCTTGACCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SGNLTSNFRAQSTERWALFPKAT*TLTRPS
Trigger: TGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAA...CAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCATCAGGTATGGCAATaGGGTCGATGTACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGHQVWQ*GRCTQD
Trigger: ATCCTGAGTACATCGACCGCATTGCCATACCTGATG...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGTGGGAAAGGATAAACTaGTCCTCTGCTAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMWERIN*SSARMN
Trigger: ATTCATCCTAGCAGAGGAGCAGTTTATCCTTTCCCA...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCAGTAGCTCATCCCACTaGACGAATTGCTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGSSSSH*TNCLER
Trigger: TCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACT...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp GGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGTGCAGGCGGGCAGCATaGTCAGGAACGGCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: GCCKLQTSGNLTSNFRAQCRRAA*SGTAAR
Trigger: CCTAGCAGCCGTTCCTGAGCATGCTGCCCGCCTGCA...CTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378916.8
ENST00000421919.5
CDS-3UTR GCA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCTCCCACTGCACGAATTaGTTGGAGAGAAGCATTGTC +
Preference number: 4 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGSHCTN*LERSIV
Trigger: GACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGA...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477738.6
CDS-3UTR CCA 90 bp TCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGCTGGCTTCACTTGCGTaGCGGCCTCTAGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SGNLTSNFRAQSTERWALLASLA*RPLAGK
Trigger: TTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAG...CAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATGTTGGCATAGGGCCCTaGAGCCTGACTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TSNFRAQSTERWALKPINVGIGP*SLTAQA
Trigger: GGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAAC...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp TGCTCTGGAAGCAGAAAGTTTGTACATGAACCTAGGCAAGTCCCTTTACCTCCCAAGCCACCTGCACCTTaGCCAGGCCGTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: CSGSRKFVHEPRQVPLPPKPPAP*PGRQPP
Trigger: AGGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTT...GGGAGGTAAAGGGACTTGCCTAGGTTCATGTACAAACTTTCTGCTTCCAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR TCA 90 bp CAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGCAGGATCCAGGTACTTaGTCAGATCTTCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: QRQVGIGPWSLTAQAHFGQDPGT*SDLQSF
Trigger: AAAAGATTGAAGATCTGATCAAGTACCTGGATCCTG...CCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGCAGGATCCAGGTACTTaGTCAGATCTTCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMQDPGT*SDLQSF
Trigger: AAAAGATTGAAGATCTGATCAAGTACCTGGATCCTG...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTCACTGGTCCTGCTGCTaGATGTGGATCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFHWSCC*MWIWAK
Trigger: CTTGGCCCAGATCCACATTCAGCAGCAGGACCAGTG...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000378916.8
ENST00000421919.5
CDS-3UTR TCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGCACTGGTCCTGCTGCTaGATGTGGATCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWHWSCC*MWIWAK
Trigger: CTTGGCCCAGATCCACATTCAGCAGCAGGACCAGTG...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000378916.8
ENST00000421919.5
CDS-3UTR GCA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACACGGGCCTGTAGCCGCTaGAAGTCAGTCAGACCCGCC +
Preference number: 4 (lower is better)
Translates to: SNFRAQSTERWALKPINTRACSR*KSVRPA
Trigger: GGCGGGTCTGACTGACTTGCAGCGGCTACAGGCCCG...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000477738.6
CDS-3UTR GCA 90 bp CTCTACCCACAGTCAATGACATACCATCCCCAGGAATTCTTGGGTACCTCCCAGTTCCCCAAAGCCACCTaGACCTTGACCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LYPQSMTYHPQEFLGTSQFPKAT*TLTRPS
Trigger: TGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAA...CTGGGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTGTGGGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTTGCAGGCGGGCAGCATaGTCAGGAACGGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFCRRAA*SGTALM
Trigger: CATCAAAGCCGTTCCTGAGCATGCTGCCCGCCTGCA...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259632.12
ENST00000341694.6
CDS-3UTR GCA 90 bp ACCTCCCAGCCTCAACCTTATGGTGTCCCAATAAAGTCCTGCTCTGGAAGCAGATGCAGGCGGGCAGCATaGTCAGGAACGGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: TSQPQPYGVPIKSCSGSRCRRAA*SGTALM
Trigger: CATCAAAGCCGTTCCTGAGCATGCTGCCCGCCTGCA...TCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATATCTGGGCCAAGCGCTaGAGGCGGGCAGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: TSNFRAQSTERWALKPINIWAKR*RRAACS
Trigger: TGAGCATGCTGCCCGCCTGCAGCGCTTGGCCCAGAT...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp CCCAAAGTTTCTGCTGAGGTTACAACAGAAAGGCCTGAAGCTGCTTCCCCAGGTGTTGGGATGAGGTGCTaGGCCACCTCCATCTTCGCT +
Preference number: 4 (lower is better)
Translates to: PKVSAEVTTERPEAASPGVGMRC*ATSIFA
Trigger: AGCGAAGATGGAGGTGGCGCAGCACCTCATCCCAAC...ACCTGGGGAAGCAGCTTCAGGCCTTTCTGTTGTAACCTCAGCAGAAACTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CCA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTCTATCACTCCTCTGCTaGCTTCACTTGCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFLSLLC*LHLRGG
Trigger: GCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAG...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CCA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTTGCCCAGGCCCACTTTaGGATGGGGAGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFCPGPL*DGEQLS
Trigger: TGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCA...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CCA 90 bp CTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATATGCCCAGGCCCACTTTaGGATGGGGAGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: LTSNFRAQSTERWALKPICPGPL*DGEQLS
Trigger: TGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCA...TATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGTGCCCAGGCCCACTTTaGGATGGGGAGCAGCTATCA +
Preference number: 4 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWCPGPL*DGEQLS
Trigger: TGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCA...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAGTTGGCATAGGGCCCTaGAGCCTGACTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SNFRAQSTERWALKPINTVGIGP*SLTAQA
Trigger: GGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAAC...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGACTCCCACTCCCCATaGAGCCTGCTGCTGAATGTG +
Preference number: 4 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWDSHSP*SLLLNV
Trigger: CACATTCAGCAGCAGGCTCCATGGGGAGTGGGAGTC...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR TCA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTGCTCAGGAACGGCTTTaGTGTGAGCACTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFAQERL*CEHCPA
Trigger: TGCTGGACAGTGCTCACATCAAAGCCGTTCCTGAGC...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259632.12
ENST00000341694.6
CDS-3UTR TCA 90 bp CAGTCAATGACATACCATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTGCTCAGGAACGGCTTTaGTGTGAGCACTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QSMTYHPQEFLGTSQPQPAQERL*CEHCPA
Trigger: TGCTGGACAGTGCTCACATCAAAGCCGTTCCTGAGC...AGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR TCA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCAAACCTCAGGTAACCTaGCCTCCAACTTTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAKPQVT*PPTLEP
Trigger: GGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTT...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp AGCAGAAAGTTTGTACATGAACCTAGGCAAGTCCCTTTACCTCCCTGGGGCATACTTCCCCAGGTGGCATaGGTTGGGATGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRKFVHEPRQVPLPPWGILPQVA*VGMRCC
Trigger: GCAGCACCTCATCCCAACTCATGCCACCTGGGGAAG...TATGCCCCAGGGAGGTAAAGGGACTTGCCTAGGTTCATGTACAAACTTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp GCCCACTTTGGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTGTCTGCTAGGATGAATTaGAGCTTAGAGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: AHFGMGSSYHSSAGFTCVSARMN*SLEASG
Trigger: ACCTGATGCCTCTAAGCTGCAATTCATCCTAGCAGA...CACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR GCA 90 bp CTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAACCAAGGCATTCACCTaGTCCAGGAGTGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: LTSNFRAQSTERWALKPITKAFT*SRSATW
Trigger: CCAGGTTGCACTCCTGGAGCAGGTGAATGCCTTGGT...TATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp CAGTCAATGACATACCATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTACCAAGGCATTCACCTaGTCCAGGAGTGCAACCTGG +
Preference number: 4 (lower is better)
Translates to: QSMTYHPQEFLGTSQPQPTKAFT*SRSATW
Trigger: CCAGGTTGCACTCCTGGAGCAGGTGAATGCCTTGGT...AGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp TGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTATCTGGGCCAAGCGCTaGAGGCGGGCAGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: CCKLQTSGNLTSNFRAQSIWAKR*RRAACS
Trigger: TGAGCATGCTGCCCGCCTGCAGCGCTTGGCCCAGAT...ACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATTCTGCTGGCTTCACTTaGGTGGCGGCCTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSNFRAQSTERWALKPINSAGFT*VAASSW
Trigger: CCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGA...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGCAGCTATCACTCCTCTaGTGGCTTCACTTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWQLSLL*WLHLRG
Trigger: GCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTG...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAGCCCTGGAGCCTGACTaGCCAGGCCCACTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SNFRAQSTERWALKPINTALEPD*PGPLWD
Trigger: ATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGC...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp ACGCTTAACCCCAAAGCCAAAGGAGCAAATGGCTATGGGAGCACTTTCAGGCTCAGGCTCCAGGATGGGTaGCCTAACAGCAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: TLNPKAKGANGYGSTFRLRLQDG*PNSSPK
Trigger: CTTTGGACTGCTGTTAGGGCACCCATCCTGGAGCCT...GAGCCTGAAAGTGCTCCCATAGCCATTTGCTCCTTTGGCTTTGGGGTTAAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp TGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTTGCAGGCGGGCAGCATaGTCAGGAACGGCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: CCKLQTSGNLTSNFRAQSCRRAA*SGTAAR
Trigger: CCTAGCAGCCGTTCCTGAGCATGCTGCCCGCCTGCA...ACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CCA 90 bp CCCCAAAGCCAAAGGAGCAAATGGCTATGGGAGCACTTTCAGGCTCCAGGATGGTCCAGGAGTGCAACCTaGGAAAGGATAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PQSQRSKWLWEHFQAPGWSRSAT*ERINCS
Trigger: GGAGCAGTTTATCCTTTCCCAGGTTGCACTCCTGGA...CCATCCTGGAGCCTGAAAGTGCTCCCATAGCCATTTGCTCCTTTGGCTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGAGGCCCACTTTGGGATaGGGAGCAGCTATCACTCCT +
Preference number: 4 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWRPTLG*GAAITP
Trigger: AGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCT...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGTAACAAAGGCAGGTTaGCATAGGGCCCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWVTKAG*HRALEP
Trigger: AGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTAC...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp GAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGGAACGGCTTTGATGTaGGCACTGTCCAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: EGGCCKLQTSGNLTSNFRGTALM*ALSSMG
Trigger: GCCCATGCTGGACAGTGCTCACATCAAAGCCGTTCC...TCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259632.12
ENST00000341694.6
CDS-3UTR TCA 90 bp CATGAACCTAGGCAAGTCCCTTTACCTCCCTGGGGCATATGCAAGATAAAGGATGGAACGGCTTTGATGTaGGCACTGTCCAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: HEPRQVPLPPWGICKIKDGTALM*ALSSMG
Trigger: GCCCATGCTGGACAGTGCTCACATCAAAGCCGTTCC...ATCCTTTATCTTGCATATGCCCCAGGGAGGTAAAGGGACTTGCCTAGGTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR TCA 90 bp TCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAACCTCAGGTAACCTaGCCTCCAACTTTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SGNLTSNFRAQSTERWALKPQVT*PPTLEP
Trigger: GGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTT...CAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp TCCCAGCCTCAACCTTATGGTGTCCCAATAAAGTCCTGCTCTGGAAGCAGAAAGTCCCATACCTGCTGCTaGATGTGGATCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SQPQPYGVPIKSCSGSRKSHTCC*MWIWAK
Trigger: CTTGGCCCAGATCCACATTCAGCAGCAGGTATGGGA...CTTTCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR TCA 90 bp GCACTTTCAGGCTCCAGGATGGGTGCCCTAACAGCAGTCCAAAGACGGATGGAATCTACCCACAGTCAATaGCATACCATCCCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ALSGSRMGALTAVQRRMESTHSQ*HTIPRN
Trigger: ATTCCTGGGGATGGTATGTCATTGACTGTGGGTAGA...TTCCATCCGTCTTTGGACTGCTGTTAGGGCACCCATCCTGGAGCCTGAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATTTCCCCAAAGCCACCTaGACCTTGACCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: TSNFRAQSTERWALKPINFPKAT*TLTRPS
Trigger: TGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAA...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp TCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGCACCTGCTCCAGGAGTaGAACCTGGGAAAGGATAAA +
Preference number: 4 (lower is better)
Translates to: SGNLTSNFRAQSTERWALHLLQE*NLGKDK
Trigger: TTTATCCTTTCCCAGGTTGCACTCCTGGAGCAGGTG...CAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACATCTGCTGGCTTCACTTaGGTGGCGGCCTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SNFRAQSTERWALKPINTSAGFT*VAASSW
Trigger: CCAGCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGA...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp GCACTTTCAGGCTCCAGGATGGGTGCCCTAACAGCAGTCCAAAGACGGATGGAACCTCCCTGGGGCATATaGAAGATAAAGGATAAACCC +
Preference number: 4 (lower is better)
Translates to: ALSGSRMGALTAVQRRMEPPWGI*KIKDKP
Trigger: GGGTTTATCCTTTATCTTGCATATGCCCCAGGGAGG...TTCCATCCGTCTTTGGACTGCTGTTAGGGCACCCATCCTGGAGCCTGAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCGCTGCTAGGATGAATTaGAGCTTAGAGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAAARMN*SLEASG
Trigger: ACCTGATGCCTCTAAGCTGCAATTCATCCTAGCAGC...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CCA 90 bp TCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGTCCAGGAGTGCAACCTaGGAAAGGATAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SGNLTSNFRAQSTERWALSRSAT*ERINCS
Trigger: GGAGCAGTTTATCCTTTCCCAGGTTGCACTCCTGGA...CAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR CCA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATCTGGCTTCACTTGCGTaGCGGCCTCTAGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TSNFRAQSTERWALKPINLASLA*RPLAGK
Trigger: TTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAG...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp CATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCAATAATCCCCAGGAATTCTTaGGTACCTCCCAGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: HPQEFLGTSQPQPYGVPIIPRNS*VPPSLN
Trigger: GTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGAT...TATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CCA 90 bp GCACTTTCAGGCTCCAGGATGGGTGCCCTAACAGCAGTCCAAAGACGGATGGAAAGCCAAAGGAGCAAATaGCTATGGGAGCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: ALSGSRMGALTAVQRRMESQRSK*LWEHFQ
Trigger: CTGAAAGTGCTCCCATAGCCATTTGCTCCTTTGGCT...TTCCATCCGTCTTTGGACTGCTGTTAGGGCACCCATCCTGGAGCCTGAAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CCA 90 bp CAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGCTCCAGTCATCTCTATaGTTTATTGTCACTGAAATA +
Preference number: 4 (lower is better)
Translates to: QRQVGIGPWSLTAQAHFGLQSSL*FIVTEI
Trigger: TATTTCAGTGACAATAAACCATAGAGATGACTGGAG...CCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378916.8
CDS-3UTR TCA 90 bp CTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAAACCTCAGGTAACCTaGCCTCCAACTTTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LTSNFRAQSTERWALKPIKPQVT*PPTLEP
Trigger: GGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTT...TATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGAAACCTCAGGTAACCTaGCCTCCAACTTTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWKPQVT*PPTLEP
Trigger: GGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTT...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR TCA 90 bp TGCTCTGGAAGCAGAAAGTTTGTACATGAACCTAGGCAAGTCCCTTTACCTCCCTACAACAGAAAGGCCTaGAGCTGCTTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CSGSRKFVHEPRQVPLPPYNRKA*SCFPRW
Trigger: CCACCTGGGGAAGCAGCTTCAGGCCTTTCTGTTGTA...GGGAGGTAAAGGGACTTGCCTAGGTTCATGTACAAACTTTCTGCTTCCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp CTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATATCACCCTCTCCCTCTTaGTGGAAATGTTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LTSNFRAQSTERWALKPISPSPS*WKCSPK
Trigger: CTTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGA...TATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp ACCTCCCAGCCTCAACCTTATGGTGTCCCAATAAAGTCCTGCTCTGGAAGCAGATCACCCTCTCCCTCTTaGTGGAAATGTTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: TSQPQPYGVPIKSCSGSRSPSPS*WKCSPK
Trigger: CTTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGA...TCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTTCACCCTCTCCCTCTTaGTGGAAATGTTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFSPSPS*WKCSPK
Trigger: CTTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGA...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR GCA 90 bp CCCCTCTACCCACAGTCAATGACATACCATCCCCAGGAATTCTTGGGTACCTCCCATCAGGTATGGCAATaGGGTCGATGTACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PLYPQSMTYHPQEFLGTSHQVWQ*GRCTQD
Trigger: ATCCTGAGTACATCGACCGCATTGCCATACCTGATG...GGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTGTGGGTAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp CATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCAATACACCTGCTCCAGGAGTaGAACCTGGGAAAGGATAAA +
Preference number: 4 (lower is better)
Translates to: HPQEFLGTSQPQPYGVPIHLLQE*NLGKDK
Trigger: TTTATCCTTTCCCAGGTTGCACTCCTGGAGCAGGTG...TATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTCCCACTGCACGAATTaGTTGGAGAGAAGCATTGTA +
Preference number: 4 (lower is better)
Translates to: TSGNLTSNFRAQSTERWASHCTN*LERSIV
Trigger: TACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGA...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR GCA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATCAGCTATCACTCCTCTaGTGGCTTCACTTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TSNFRAQSTERWALKPINQLSLL*WLHLRG
Trigger: GCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTG...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp TGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTCTGGCTTCACTTGCGTaGCGGCCTCTAGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: CCKLQTSGNLTSNFRAQSLASLA*RPLAGK
Trigger: TTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAG...ACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp CTGCACGAATTGCTTGGAGAGAAGCATTGTAGTCTTGTTGTATTCCTCCAGGAGCTGGCTTCACTTGCGTaGCGGCCTCTAGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LHELLGEKHCSLVVFLQELASLA*RPLAGK
Trigger: TTTGCCAGCTAGAGGCCGCCACGCAAGTGAAGCCAG...CTCCTGGAGGAATACAACAAGACTACAATGCTTCTCTCCAAGCAATTCGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR CCA 90 bp TGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTCTATCACTCCTCTGCTaGCTTCACTTGCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: CCKLQTSGNLTSNFRAQSLSLLC*LHLRGG
Trigger: GCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAG...ACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp GAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAAGGCCCACTTTGGGATaGGGAGCAGCTATCACTCCT +
Preference number: 4 (lower is better)
Translates to: EGGCCKLQTSGNLTSNFRRPTLG*GAAITP
Trigger: AGGAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCT...TCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CCA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATGTAACAAAGGCAGGTTaGCATAGGGCCCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TSNFRAQSTERWALKPINVTKAG*HRALEP
Trigger: AGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTAC...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp CAGTCAATGACATACCATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTCAGTCCAAAGACGGATaGAAAAGGGAGTGGCCATAC +
Preference number: 4 (lower is better)
Translates to: QSMTYHPQEFLGTSQPQPQSKDG*KREWPY
Trigger: GTATGGCCACTCCCTTTTCCATCCGTCTTTGGACTG...AGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CCA 90 bp CAGTCAATGACATACCATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTAGGAGCAAATGGCTATaGGAGCACTTTCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QSMTYHPQEFLGTSQPQPRSKWL*EHFQAP
Trigger: TGGAGCCTGAAAGTGCTCCCATAGCCATTTGCTCCT...AGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR CAA 72 bp TACCCACAGTCAATGACATACCATCCCCAGGAATTCTaGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: YPQSMTYHPQEF*GTSQPQPYGVP
Trigger: TGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTGTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR TCA 90 bp TCCCAGCCTCAACCTTATGGTGTCCCAATAAAGTCCTGCTCTGGAAGCAGAAAGCCCCAAAGTTTCTGCTaGGGTTACAACAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SQPQPYGVPIKSCSGSRKPQSFC*GYNRKA
Trigger: GGCCTTTCTGTTGTAACCTCAGCAGAAACTTTGGGG...CTTTCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp TCATCCCACTGCACGAATTGCTTGGAGAGAAGCATTGTAGTCTTGTTGTATTCCTTCCCCAAAGCCACCTaGACCTTGACCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SSHCTNCLERSIVVLLYSFPKAT*TLTRPS
Trigger: TGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAA...GGAATACAACAAGACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR GCA 90 bp CTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATACATCAGGTATGGCAATaGGGTCGATGTACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LTSNFRAQSTERWALKPIHQVWQ*GRCTQD
Trigger: ATCCTGAGTACATCGACCGCATTGCCATACCTGATG...TATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGCATCAGGTATGGCAATaGGGTCGATGTACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWHQVWQ*GRCTQD
Trigger: ATCCTGAGTACATCGACCGCATTGCCATACCTGATG...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp CTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAGTAGCTCATCCCACTaGACGAATTGCTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LTSNFRAQSTERWALKPISSSSH*TNCLER
Trigger: TCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACT...TATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATGGGGAGGGTGGGTGTTaGAAATTGCAAACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TSNFRAQSTERWALKPINGEGGC*KLQTSG
Trigger: ACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CCA 90 bp AACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAGCTATCACTCCTCTGCTaGCTTCACTTGCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: NFRAQSTERWALKPINTKLSLLC*LHLRGG
Trigger: GCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAG...CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CCA 90 bp CCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCAATAAAGCCAGCCTCAACCTTATaGTGTCCCAATAAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PQEFLGTSQPQPYGVPIKPASTL*CPNKVL
Trigger: CAGGACTTTATTGGGACACCATAAGGTTGAGGCTGG...CTTTATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR TCA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACACCTTGGACTCCTCAGTaGTTTCCACACACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SNFRAQSTERWALKPINTPWTPQ*FPHTGP
Trigger: AGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGG...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR GCA 90 bp CATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCAATATCTGCTAGGATGAATTaGAGCTTAGAGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: HPQEFLGTSQPQPYGVPISARMN*SLEASG
Trigger: ACCTGATGCCTCTAAGCTGCAATTCATCCTAGCAGA...TATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp CTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATATCTGCTAGGATGAATTaGAGCTTAGAGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LTSNFRAQSTERWALKPISARMN*SLEASG
Trigger: ACCTGATGCCTCTAAGCTGCAATTCATCCTAGCAGA...TATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp GAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGACACCTGCTCCAGGAGTaGAACCTGGGAAAGGATAAA +
Preference number: 4 (lower is better)
Translates to: EGGCCKLQTSGNLTSNFRHLLQE*NLGKDK
Trigger: TTTATCCTTTCCCAGGTTGCACTCCTGGAGCAGGTG...TCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259632.12
ENST00000341694.6
CDS-3UTR GCA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTTCCCACTGCACGAATTaGTTGGAGAGAAGCATTGTA +
Preference number: 4 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFSHCTN*LERSIV
Trigger: TACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGA...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR TCA 90 bp TCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGCAGGATCCAGGTACTTaGTCAGATCTTCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: SGNLTSNFRAQSTERWALQDPGT*SDLQSF
Trigger: AAAAGATTGAAGATCTGATCAAGTACCTGGATCCTG...CAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTTGGGAAAGGATAAACTaGTCCTCTGCTAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFWERIN*SSARMN
Trigger: ATTCATCCTAGCAGAGGAGCAGTTTATCCTTTCCCA...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259632.12
ENST00000341694.6
CDS-3UTR GCA 90 bp CTCTACCCACAGTCAATGACATACCATCCCCAGGAATTCTTGGGTACCTCCCAGTGGGAAAGGATAAACTaGTCCTCTGCTAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: LYPQSMTYHPQEFLGTSQWERIN*SSARMN
Trigger: ATTCATCCTAGCAGAGGAGCAGTTTATCCTTTCCCA...CTGGGAGGTACCCAAGAATTCCTGGGGATGGTATGTCATTGACTGTGGGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTATACAAAGCTTCCTCTaGCTTGTAACAAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFIQSFL*LVTKAG
Trigger: ACCTGCCTTTGTTACAAGGCAGAGGAAGCTTTGTAT...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CCA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAGCACAGAAAGGAACTaGGCAAAGCCCACATCTTCC +
Preference number: 4 (lower is better)
Translates to: SNFRAQSTERWALKPINTSTERN*AKPTSS
Trigger: GGAAGATGTGGGCTTTGCCCAGTTCCTTTCTGTGCT...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR TCA 90 bp CATCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCAATACAGGATCCAGGTACTTaGTCAGATCTTCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: HPQEFLGTSQPQPYGVPIQDPGT*SDLQSF
Trigger: AAAAGATTGAAGATCTGATCAAGTACCTGGATCCTG...TATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR GCA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACACATCAGGTATGGCAATaGGGTCGATGTACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SNFRAQSTERWALKPINTHQVWQ*GRCTQD
Trigger: ATCCTGAGTACATCGACCGCATTGCCATACCTGATG...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp AACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAGCACCTGCTCCAGGAGTaGAACCTGGGAAAGGATAAA +
Preference number: 4 (lower is better)
Translates to: NFRAQSTERWALKPINTKHLLQE*NLGKDK
Trigger: TTTATCCTTTCCCAGGTTGCACTCCTGGAGCAGGTG...CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp TGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTAGTAGCTCATCCCACTaGACGAATTGCTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: CCKLQTSGNLTSNFRAQSSSSSH*TNCLER
Trigger: TCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACT...ACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp ATGACGCTTAACCCCAAAGCCAAAGGAGCAAATGGCTATGGGAGCACTTTCAGGGTCCCAATAAAGTCCTaGTCTGGAAGCAGAAAGTTT +
Preference number: 4 (lower is better)
Translates to: MTLNPKAKGANGYGSTFRVPIKS*SGSRKF
Trigger: AAACTTTCTGCTTCCAGAGCAGGACTTTATTGGGAC...CCTGAAAGTGCTCCCATAGCCATTTGCTCCTTTGGCTTTGGGGTTAAGCGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
3UTR CAA 72 bp AGCTGGCAAAGTAGCTCATCCCACTGCACGAATTGCTaGGAGAGAAGCATTGTAGTCTTGTTGTATTCCTCC +
Preference number: 4 (lower is better)
Translates to: SWQSSSSHCTNC*ERSIVVLLYSS
Trigger: GGAGGAATACAACAAGACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR GCA 90 bp CTGCACGAATTGCTTGGAGAGAAGCATTGTAGTCTTGTTGTATTCCTCCAGGAGTCCCACTGCACGAATTaGTTGGAGAGAAGCATTGTA +
Preference number: 4 (lower is better)
Translates to: LHELLGEKHCSLVVFLQESHCTN*LERSIV
Trigger: TACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGA...CTCCTGGAGGAATACAACAAGACTACAATGCTTCTCTCCAAGCAATTCGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR GCA 90 bp TGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTTCCCACTGCACGAATTaGTTGGAGAGAAGCATTGTA +
Preference number: 4 (lower is better)
Translates to: CCKLQTSGNLTSNFRAQSSHCTN*LERSIV
Trigger: TACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGA...ACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR GCA 90 bp AACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAGAGTAGCTCATCCCACTaGACGAATTGCTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NFRAQSTERWALKPINTKSSSSH*TNCLER
Trigger: TCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACT...CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp AACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAGTCTGCTAGGATGAATTaGAGCTTAGAGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: NFRAQSTERWALKPINTKSARMN*SLEASG
Trigger: ACCTGATGCCTCTAAGCTGCAATTCATCCTAGCAGA...CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp TGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTTGGGAAAGGATAAACTaGTCCTCTGCTAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: CCKLQTSGNLTSNFRAQSWERIN*SSARMN
Trigger: ATTCATCCTAGCAGAGGAGCAGTTTATCCTTTCCCA...ACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000477738.6
CDS-3UTR GCA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAATACAAAGCTTCCTCTaGCTTGTAACAAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SNFRAQSTERWALKPINTIQSFL*LVTKAG
Trigger: ACCTGCCTTTGTTACAAGGCAGAGGAAGCTTTGTAT...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR GCA 90 bp TCATCCCACTGCACGAATTGCTTGGAGAGAAGCATTGTAGTCTTGTTGTATTCCATACAAAGCTTCCTCTaGCTTGTAACAAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSHCTNCLERSIVVLLYSIQSFL*LVTKAG
Trigger: ACCTGCCTTTGTTACAAGGCAGAGGAAGCTTTGTAT...GGAATACAACAAGACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS GCA 90 bp CCGTACACCCAGCGCTCCAGCTCTTCCACTCGGGCCTGTAGCCGCTaGAAGTCAGTCAGACCCGCCATCGCTACTACCGACCCACCTCGG +
Preference number: 5 (lower is better)
Translates to: PYTQRSSSSTRACSR*KSVRPAIATTDPPR
Trigger: CCGAGGTGGGTCGGTAGTAGCGATGGCGGGTCTGACTGACTTGCAGCGGCTACAGGCCCGAGTGGAAGAGCTGGAGCGCTGGGTGTACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259632.12
ENST00000378916.8
CDS-3UTR CAA 90 bp TGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGAAAGCCACCTGCACCTaGACCAGGCCGTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: WHRALEPDCPGPLWDGEQKATCT*TRPSAT
Trigger: GGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTTT...CTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS GCA 90 bp ATCTTCACCCTCTCCCTCTTGCTGGAAATGTTCCCCAAAGCCACCTaGACCTTGACCAGGCCGTCAGCCACCTTCCGTGAGCCGCGCGCC +
Preference number: 5 (lower is better)
Translates to: IFTLSLLLEMFPKAT*TLTRPSATFREPRA
Trigger: GGCGCGCGGCTCACGGAAGGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378911.3
ENST00000378913.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp CAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGGGGGGAGGGTGGGTGTaGCAAATTGCAAACCTCAGG +
Preference number: 5 (lower is better)
Translates to: QRQVGIGPWSLTAQAHFGGGGWV*QIANLR
Trigger: CCTGAGGTTTGCAATTTGCAACACCCACCCTCCCCC...CCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTG
62% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp TGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGTTCACCCTCTCCCTCTaGCTGGAAATGTTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: WHRALEPDCPGPLWDGEQFTLSL*LEMFPK
Trigger: TTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGAA...CTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp CTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCAGGGGGAGGGTGGGTGTaGCAAATTGCAAACCTCAGG +
Preference number: 5 (lower is better)
Translates to: LVTKAGWHRALEPDCPGPGGGWV*QIANLR
Trigger: CCTGAGGTTTGCAATTTGCAACACCCACCCTCCCCC...TGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp ATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTGGCGGCCTCTAGCGGGGGAGGGTGGGTGTaGCAAATTGCAAACCTCAGG +
Preference number: 5 (lower is better)
Translates to: MGSSYHSSAGFTCVAASSGGGWV*QIANLR
Trigger: CCTGAGGTTTGCAATTTGCAACACCCACCCTCCCCC...GCTAGAGGCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS TCA 90 bp ACCTCCATCTTCGCTTCTAGTCATCTCCCCTCCCATACCTGCTGCTaGATGTGGATCTGGGCCAAGCGCTGCAGGCGGGCAGCATGCTCA +
Preference number: 5 (lower is better)
Translates to: TSIFASSHLPSHTCC*MWIWAKRCRRAACS
Trigger: TGAGCATGCTGCCCGCCTGCAGCGCTTGGCCCAGATCCACATTCAGCAGCAGGTATGGGAGGGGAGATGACTAGAAGCGAAGATGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378913.6
ENST00000479399.5
CDS-3UTR CAA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCAAAGCCACCTGCACCTaGACCAGGCCGTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAKATCT*TRPSAT
Trigger: GGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTTT...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp CTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCATCCTCCAGGAGAGCCTaGGACTCCTCAGTGATTTCC +
Preference number: 5 (lower is better)
Translates to: LVTKAGWHRALEPDCPGPSSRRA*DSSVIS
Trigger: GGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGA...TGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCTCCTCCAGGAGAGCCTaGGACTCCTCAGTGATTTCC +
Preference number: 5 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGSSRRA*DSSVIS
Trigger: GGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGA...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp CAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGGGTGGGTGTTGCAAATaGCAAACCTCAGGTAACCTG +
Preference number: 5 (lower is better)
Translates to: QRQVGIGPWSLTAQAHFGGGCCK*QTSGNL
Trigger: CAGGTTACCTGAGGTTTGCAATTTGCAACACCCACC...CCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS CCA 90 bp AGTGGAGAAGCTAAACAAACGCCAGACTTCATCGACTGCTGCAGCTaGAGGTGGCAGTGGGGCTCCCTGCCCACTCCAGTCTTACTCCAG +
Preference number: 5 (lower is better)
Translates to: SGEAKQTPDFIDCCS*RWQWGSLPTPVLLQ
Trigger: CTGGAGTAAGACTGGAGTGGGCAGGGAGCCCCACTGCCACCTCCAGCTGCAGCAGTCGATGAAGTCTGGCGTTTGTTTAGCTTCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472418.5
ENST00000479399.5
CDS-3UTR CAA 90 bp TGGGATGGGGAGCAGCTATCACTCCTCTGCTGGCTTCACTTGCGTGGCGGCCTCGGTGGGTGTTGCAAATaGCAAACCTCAGGTAACCTG +
Preference number: 5 (lower is better)
Translates to: WDGEQLSLLCWLHLRGGLGGCCK*QTSGNL
Trigger: CAGGTTACCTGAGGTTTGCAATTTGCAACACCCACC...GAGGCCGCCACGCAAGTGAAGCCAGCAGAGGAGTGATAGCTGCTCCCCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS CCA 90 bp TTGCTAATCAGCCCATGTAAGGGCCTGAGGACCTGGCAAGGGAGATaGCTAGGTCCTAGAGCTTTGGACAGTGACTCTGTCCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: LLISPCKGLRTWQGR*LGPRALDSDSVHCP
Trigger: GGGGCAGTGGACAGAGTCACTGTCCAAAGCTCTAGGACCTAGCCATCTCCCTTGCCAGGTCCTCAGGCCCTTACATGGGCTGATTAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472074.1
ENST00000479399.5
CDS-3UTR CAA 90 bp CCCAAAGTTTCTGCTGAGGTTACAACAGAAAGGCCTGAAGCTGCTTCCCCAGGTAAAGCCACCTGCACCTaGACCAGGCCGTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: PKVSAEVTTERPEAASPGKATCT*TRPSAT
Trigger: GGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTTT...ACCTGGGGAAGCAGCTTCAGGCCTTTCTGTTGTAACCTCAGCAGAAACTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CAA 90 bp CTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCATTCACCCTCTCCCTCTaGCTGGAAATGTTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: LVTKAGWHRALEPDCPGPFTLSL*LEMFPK
Trigger: TTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGAA...TGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp GCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGCTATCACTCACAGAGAGGTGGGCCTaGAAGCCAATAAATACAAAG +
Preference number: 5 (lower is better)
Translates to: ALEPDCPGPLWDGEQLSLTERWA*KPINTK
Trigger: CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGT...GAGTGATAGCTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR CAA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGACAGAGAGGTGGGCCTaGAAGCCAATAAATACAAAG +
Preference number: 5 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMTERWA*KPINTK
Trigger: CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGT...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp CTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCAGCTTGGAGAGAAGCATaGTCTGGTTGTAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: LVTKAGWHRALEPDCPGPAWREA*SGCRSR
Trigger: CCTTGACCTACAACCAGACAATGCTTCTCTCCAAGC...TGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477738.6
CDS TCA 90 bp CTGAGGTTACAACAGAAAGGCCTGAAGCTGCTTCCCCAGGTGGCATaGGTTGGGATGAGGTGCTGCGCCACCTCCATCTTCGCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LRLQQKGLKLLPQVA*VGMRCCATSIFASS
Trigger: ACTAGAAGCGAAGATGGAGGTGGCGCAGCACCTCATCCCAACTCATGCCACCTGGGGAAGCAGCTTCAGGCCTTTCTGTTGTAACCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378913.6
ENST00000479399.5
CDS CCA 90 bp ACAATTCCAGAGAGCAGCATCCAGGGCTTGTATCCACCAGAAGACTaGATGGAGAGGCCATCTCTGTGCTTAACCTCCCCGACGACCCAC +
Preference number: 5 (lower is better)
Translates to: TIPESSIQGLYPPED*MERPSLCLTSPTTH
Trigger: GTGGGTCGTCGGGGAGGTTAAGCACAGAGATGGCCTCTCCATCCAGTCTTCTGGTGGATACAAGCCCTGGATGCTGCTCTCTGGAATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378911.3
CDS-3UTR CAA 90 bp CAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGTCAGGATCCAGGTACTaGATCAGATCTTCAATCTTT +
Preference number: 5 (lower is better)
Translates to: QVGIGPWSLTAQAHFGMGSGSRY*IRSSIF
Trigger: AAAGATTGAAGATCTGATCAAGTACCTGGATCCTGA...CCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp TGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGGGGAGCAGTCAGGATCCAGGTACTaGATCAGATCTTCAATCTTT +
Preference number: 5 (lower is better)
Translates to: WHRALEPDCPGPLWDGEQSGSRY*IRSSIF
Trigger: AAAGATTGAAGATCTGATCAAGTACCTGGATCCTGA...CTGCTCCCCATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCACTGCACGAATTGCTaGGAGAGAAGCATTGTAGTC +
Preference number: 5 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGHCTNC*ERSIVV
Trigger: GACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTG...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCATCCCACTGCACGAATaGCTTGGAGAGAAGCATTGT +
Preference number: 5 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGIPLHE*LGEKHC
Trigger: ACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGAT...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp CTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCAATCCCACTGCACGAATaGCTTGGAGAGAAGCATTGT +
Preference number: 5 (lower is better)
Translates to: LVTKAGWHRALEPDCPGPIPLHE*LGEKHC
Trigger: ACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGAT...TGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS GCA 90 bp CAGGGCTTGTATCCACCAGAAGACTGGATGGAGAGGCCATCTCTGTaGTTAACCTCCCCGACGACCCACATCCTCAGATGCATGTACACA +
Preference number: 5 (lower is better)
Translates to: QGLYPPEDWMERPSL*LTSPTTHILRCMYT
Trigger: TGTGTACATGCATCTGAGGATGTGGGTCGTCGGGGAGGTTAAGCACAGAGATGGCCTCTCCATCCAGTCTTCTGGTGGATACAAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378911.3
CDS CCA 90 bp CAAACCTGGGCATTGCTAATCAGCCCATGTAAGGGCCTGAGGACCTaGCAAGGGAGATGGCTAGGTCCTAGAGCTTTGGACAGTGACTCT +
Preference number: 5 (lower is better)
Translates to: QTWALLISPCKGLRT*QGRWLGPRALDSDS
Trigger: AGAGTCACTGTCCAAAGCTCTAGGACCTAGCCATCTCCCTTGCCAGGTCCTCAGGCCCTTACATGGGCTGATTAGCAATGCCCAGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472074.1
ENST00000479399.5
CDS-3UTR CAA 90 bp GAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAAAAGCCACCTGCACCTaGACCAGGCCGTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: EGGCCKLQTSGNLTSNFRKATCT*TRPSAT
Trigger: GGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTTT...TCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp AGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCCCACTTTGGGATGTCAGGATCCAGGTACTaGATCAGATCTTCAATCTTT +
Preference number: 5 (lower is better)
Translates to: RQVGIGPWSLTAQAHFGMSGSRY*IRSSIF
Trigger: AAAGATTGAAGATCTGATCAAGTACCTGGATCCTGA...CATCCCAAAGTGGGCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS GCA 90 bp CCTTCTCTAGGTGCACATTTCCATCCTGCCCCCAACTCTCCTGGATaGCTCAGGTCTGACCCATCTGAGCCTAATGAGCCTCTCAATTTC +
Preference number: 5 (lower is better)
Translates to: PSLGAHFHPAPNSPG*LRSDPSEPNEPLNF
Trigger: GAAATTGAGAGGCTCATTAGGCTCAGATGGGTCAGACCTGAGGCATCCAGGAGAGTTGGGGGCAGGATGGAAATGTGCACCTAGAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472074.1
ENST00000479399.5
CDS CCA 90 bp CCACACACTGGTCCTGTAGGGCCAAAGTGTAGCACAGAAAGGAACTaGGCAAAGCCCACATCTTCCACTAAACTTCCTGCCTCATCACGG +
Preference number: 5 (lower is better)
Translates to: PHTGPVGPKCSTERN*AKPTSSTKLPASSR
Trigger: CCGTGATGAGGCAGGAAGTTTAGTGGAAGATGTGGGCTTTGCCCAGTTCCTTTCTGTGCTACACTTTGGCCCTACAGGACCAGTGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341694.6
ENST00000479399.5
CDS-3UTR CAA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAAGCCACCTGCACCTaGACCAGGCCGTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: SNFRAQSTERWALKPINTKATCT*TRPSAT
Trigger: GGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTTT...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTCACCCTCTCCCTCTaGCTGGAAATGTTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAFTLSL*LEMFPK
Trigger: TTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGAA...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp GTGGCGGCCTCTAGCTGGCAAAGTAGCTCATCCCACTGCACGAATTGCTTGGAGAGCATTGTAGTCTTGTaGTATTCCTCCAGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: VAASSWQSSSSHCTNCLESIVVL*YSSRRA
Trigger: GGCTCTCCTGGAGGAATACAACAAGACTACAATGCT...CTCCAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR CAA 90 bp TGCCTTGTAACAAAGGCAGGTTGGCATAGGGCCCTGGAGCCTGACTGCCCAGGCAGAAGCATTGTAGTCTaGTTGTATTCCTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: CLVTKAGWHRALEPDCPGRSIVV*LYSSRR
Trigger: TCTCCTGGAGGAATACAACAAGACTACAATGCTTCT...GCCTGGGCAGTCAGGCTCCAGGGCCCTATGCCAACCTGCCTTTGTTACAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp CTTGCGTGGCGGCCTCTAGCTGGCAAAGTAGCTCATCCCACTGCACGAATTGCTCACTGCACGAATTGCTaGGAGAGAAGCATTGTAGTC +
Preference number: 5 (lower is better)
Translates to: LAWRPLAGKVAHPTARIAHCTNC*ERSIVV
Trigger: GACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTG...AGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCACGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341694.6
CDS-3UTR CAA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCGGTGGGTGTTGCAAATaGCAAACCTCAGGTAACCTG +
Preference number: 5 (lower is better)
Translates to: TSGNLTSNFRAQSTERWAGGCCK*QTSGNL
Trigger: CAGGTTACCTGAGGTTTGCAATTTGCAACACCCACC...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS TCA 90 bp CTCCCCAACCAGAGTAGTGAAGCTATAACCCCAGAGAGATACCTTTaGTGTGAGCACTGTCCAGCATGGGCACCAAGGCATTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: LPNQSSEAITPERYL*CEHCPAWAPRHSPA
Trigger: AGCAGGTGAATGCCTTGGTGCCCATGCTGGACAGTGCTCACATCAAAGGTATCTCTCTGGGGTTATAGCTTCACTACTCTGGTTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS CCA 90 bp TCCAGCATGGGCACCAAGGCATTCACCTGCTCCAGGAGTGCAACCTaGGAAAGGATAAACTGCTCCTCTGCTAGGATGAATTGCAGCTTA +
Preference number: 5 (lower is better)
Translates to: SSMGTKAFTCSRSAT*ERINCSSARMNCSL
Trigger: TAAGCTGCAATTCATCCTAGCAGAGGAGCAGTTTATCCTTTCCCAGGTTGCACTCCTGGAGCAGGTGAATGCCTTGGTGCCCATGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378913.6
ENST00000477738.6
CDS-3UTR CAA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCAGCATTGTAGTCTTGTaGTATTCCTCCAGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: TSGNLTSNFRAQSTERWASIVVL*YSSRRA
Trigger: GGCTCTCCTGGAGGAATACAACAAGACTACAATGCT...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATGGGGGAGGGTGGGTGTaGCAAATTGCAAACCTCAGG +
Preference number: 5 (lower is better)
Translates to: TSNFRAQSTERWALKPINGGGWV*QIANLR
Trigger: CCTGAGGTTTGCAATTTGCAACACCCACCCTCCCCC...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS GCA 90 bp AGGCCATCTCTGTGCTTAACCTCCCCGACGACCCACATCCTCAGATaGATGTACACATGTAGTCCAGCATTACCTGCTAGGATGAATTGC +
Preference number: 5 (lower is better)
Translates to: RPSLCLTSPTTHILR*MYTCSPALPARMNC
Trigger: GCAATTCATCCTAGCAGGTAATGCTGGACTACATGTGTACATGCATCTGAGGATGTGGGTCGTCGGGGAGGTTAAGCACAGAGATGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378911.3
CDS-3UTR CAA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGTTCACCCTCTCCCTCTaGCTGGAAATGTTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWFTLSL*LEMFPK
Trigger: TTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGAA...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp GAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGATCCTCCAGGAGAGCCTaGGACTCCTCAGTGATTTCC +
Preference number: 5 (lower is better)
Translates to: EGGCCKLQTSGNLTSNFRSSRRA*DSSVIS
Trigger: GGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGA...TCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp TCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGATCCCACTGCACGAATaGCTTGGAGAGAAGCATTGT +
Preference number: 5 (lower is better)
Translates to: SGNLTSNFRAQSTERWALIPLHE*LGEKHC
Trigger: ACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGAT...CAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp ACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCACAGAGAGGTGGGCCTaGAAGCCAATAAATACAAAG +
Preference number: 5 (lower is better)
Translates to: TSGNLTSNFRAQSTERWATERWA*KPINTK
Trigger: CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGT...GGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGGTGGGTGTTGCAAATaGCAAACCTCAGGTAACCTG +
Preference number: 5 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWGGCCK*QTSGNL
Trigger: CAGGTTACCTGAGGTTTGCAATTTGCAACACCCACC...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp GGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGTTCACCCTCTCCCTCTaGCTGGAAATGTTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: GCCKLQTSGNLTSNFRAQFTLSL*LEMFPK
Trigger: TTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGAA...CTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp TCCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCAATAAATTCACCCTCTCCCTCTaGCTGGAAATGTTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: SPGILGYLPASTLWCPNKFTLSL*LEMFPK
Trigger: TTTGGGGAACATTTCCAGCAAGAGGGAGAGGGTGAA...TTTATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CAA 90 bp GGGGAGGGTGGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTCACTGCACGAATTGCTaGGAGAGAAGCATTGTAGTC +
Preference number: 5 (lower is better)
Translates to: GEGGCCKLQTSGNLTSNFHCTNC*ERSIVV
Trigger: GACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTG...AAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCCACCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp GGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGCACTGCACGAATTGCTaGGAGAGAAGCATTGTCTGG +
Preference number: 5 (lower is better)
Translates to: GCCKLQTSGNLTSNFRAQHCTNC*ERSIVW
Trigger: CCAGACAATGCTTCTCTCCAAGCAATTCGTGCAGTG...CTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477738.6
CDS CCA 90 bp TCCAGCATGGGCACCAAGGCATTCACCTGCTCCAGGAGTGCAACCTaGGAAAGGATAAACTGCTCCTCTAAAGCAAAAATGGACAAGATA +
Preference number: 5 (lower is better)
Translates to: SSMGTKAFTCSRSAT*ERINCSSKAKMDKI
Trigger: TATCTTGTCCATTTTTGCTTTAGAGGAGCAGTTTATCCTTTCCCAGGTTGCACTCCTGGAGCAGGTGAATGCCTTGGTGCCCATGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472074.1
ENST00000479399.5
CDS-3UTR CAA 90 bp AACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAGTCCTCCAGGAGAGCCTaGGACTCCTCAGTGATTTCC +
Preference number: 5 (lower is better)
Translates to: NFRAQSTERWALKPINTKSSRRA*DSSVIS
Trigger: GGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGA...CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp CCCCAGGAATTCTTGGGTACCTCCCAGCCTCAACCTTATGGTGTCCCAATAAAGCTGGAAGCAGAAAGTTaGTACATGAACCTAGGCAAG +
Preference number: 5 (lower is better)
Translates to: PQEFLGTSQPQPYGVPIKLEAES*YMNLGK
Trigger: CTTGCCTAGGTTCATGTACAAACTTTCTGCTTCCAG...CTTTATTGGGACACCATAAGGTTGAGGCTGGGAGGTACCCAAGAATTCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CAA 90 bp ACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATAGCATTGTAGTCTTGTaGTATTCCTCCAGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: TSNFRAQSTERWALKPINSIVVL*YSSRRA
Trigger: GGCTCTCCTGGAGGAATACAACAAGACTACAATGCT...ATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGAGAAGCATTGTAGTCTaGTTGTATTCCTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWRSIVV*LYSSRR
Trigger: TCTCCTGGAGGAATACAACAAGACTACAATGCTTCT...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp GGGTGTTGCAAATTGCAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGACAGAGAGGTGGGCCTaGAAGCCAATAAATACAAAG +
Preference number: 5 (lower is better)
Translates to: GCCKLQTSGNLTSNFRAQTERWA*KPINTK
Trigger: CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGT...CTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTGCAATTTGCAACACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS GCA 90 bp AGATGCATGTACACATGTAGTCCAGCATTACCTGCTAGGATGAATTaGAGCTTAGAGGCATCAGGTATGGCAATGCGGTCGATGTACTCA +
Preference number: 5 (lower is better)
Translates to: RCMYTCSPALPARMN*SLEASGMAMRSMYS
Trigger: TGAGTACATCGACCGCATTGCCATACCTGATGCCTCTAAGCTGCAATTCATCCTAGCAGGTAATGCTGGACTACATGTGTACATGCATCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378911.3
CDS-3UTR CAA 90 bp CAAACCTCAGGTAACCTGACCTCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGTCAGGATCCAGGTACTaGATCAGATCTTCAATCTTT +
Preference number: 5 (lower is better)
Translates to: QTSGNLTSNFRAQSTERWSGSRY*IRSSIF
Trigger: AAAGATTGAAGATCTGATCAAGTACCTGGATCCTGA...CCACCTCTCTGTACTCTGGGCTCTAAAGTTGGAGGTCAGGTTACCTGAGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAGCATTGTAGTCTTGTaGTATTCCTCCAGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SNFRAQSTERWALKPINTSIVVL*YSSRRA
Trigger: GGCTCTCCTGGAGGAATACAACAAGACTACAATGCT...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACACACTGCACGAATTGCTaGGAGAGAAGCATTGTAGTC +
Preference number: 5 (lower is better)
Translates to: SNFRAQSTERWALKPINTHCTNC*ERSIVV
Trigger: GACTACAATGCTTCTCTCCAAGCAATTCGTGCAGTG...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAATCCCACTGCACGAATaGCTTGGAGAGAAGCATTGT +
Preference number: 5 (lower is better)
Translates to: SNFRAQSTERWALKPINTIPLHE*LGEKHC
Trigger: ACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGAT...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp TCCCAGCCTCAACCTTATGGTGTCCCAATAAAGTCCTGCTCTGGAAGCAGAAAGTCAGGATCCAGGTACTaGATCAGATCTTCAATCTTT +
Preference number: 5 (lower is better)
Translates to: SQPQPYGVPIKSCSGSRKSGSRY*IRSSIF
Trigger: AAAGATTGAAGATCTGATCAAGTACCTGGATCCTGA...CTTTCTGCTTCCAGAGCAGGACTTTATTGGGACACCATAAGGTTGAGGCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CAA 90 bp AACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAGATCCCACTGCACGAATaGCTTGGAGAGAAGCATTGT +
Preference number: 5 (lower is better)
Translates to: NFRAQSTERWALKPINTKIPLHE*LGEKHC
Trigger: ACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGAT...CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAGAAGCATTGTAGTCTaGTTGTATTCCTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SNFRAQSTERWALKPINTRSIVV*LYSSRR
Trigger: TCTCCTGGAGGAATACAACAAGACTACAATGCTTCT...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS-3UTR CAA 90 bp AGCAGAAAGTTTGTACATGAACCTAGGCAAGTCCCTTTACCTCCCTGGGGCATAATTTCTGAACTCTCTTaGAACTTTACACTAGGGCCT +
Preference number: 5 (lower is better)
Translates to: SRKFVHEPRQVPLPPWGIISELS*NFTLGP
Trigger: AGGCCCTAGTGTAAAGTTCAAAGAGAGTTCAGAAAT...TATGCCCCAGGGAGGTAAAGGGACTTGCCTAGGTTCATGTACAAACTTTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378913.6
CDS-3UTR CAA 90 bp TCCAACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACATCAGGATCCAGGTACTaGATCAGATCTTCAATCTTT +
Preference number: 5 (lower is better)
Translates to: SNFRAQSTERWALKPINTSGSRY*IRSSIF
Trigger: AAAGATTGAAGATCTGATCAAGTACCTGGATCCTGA...TGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS-3UTR CAA 90 bp AACTTTAGAGCCCAGAGTACAGAGAGGTGGGCCTTGAAGCCAATAAATACAAAGAGAAGCATTGTAGTCTaGTTGTATTCCTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: NFRAQSTERWALKPINTKRSIVV*LYSSRR
Trigger: TCTCCTGGAGGAATACAACAAGACTACAATGCTTCT...CTTTGTATTTATTGGCTTCAAGGCCCACCTCTCTGTACTCTGGGCTCTAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378916.8
ENST00000421919.5
CDS GCA 72 bp CAGCGCTCCAGCTCTTCCACTCGGGCCTGTAGCCGCTaGAAGTCAGTCAGACCCGCCATCGCTACTACCGAC +
Preference number: 6 (lower is better)
Translates to: QRSSSSTRACSR*KSVRPAIATTD
Trigger: GTCGGTAGTAGCGATGGCGGGTCTGACTGACTTGCAGCGGCTACAGGCCCGAGTGGAAGAGCTGGAGCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259632.12
ENST00000378913.6
ENST00000378916.8
CDS TCA 72 bp TCTTGCTGGAAATGTTCCCCAAAGCCACCTGCACCTTaGCCAGGCCGTCAGCCACCTTCCGTGAGCCGCGCG +
Preference number: 6 (lower is better)
Translates to: SCWKCSPKPPAP*PGRQPPSVSRA
Trigger: CGCGCGGCTCACGGAAGGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAACATTTCCAGCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378911.3
ENST00000378913.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS CAA 72 bp CTCTTGCTGGAAATGTTCCCCAAAGCCACCTGCACCTaGACCAGGCCGTCAGCCACCTTCCGTGAGCCGCGC +
Preference number: 6 (lower is better)
Translates to: LLLEMFPKATCT*TRPSATFREPR
Trigger: GCGCGGCTCACGGAAGGTGGCTGACGGCCTGGTCAAGGTGCAGGTGGCTTTGGGGAACATTTCCAGCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378911.3
ENST00000378913.6
ENST00000378916.8
ENST00000421919.5
ENST00000477738.6
CDS TCA 72 bp TTCGCTTCTAGTCATCTCCCCTCCCATACCTGCTGCTaGATGTGGATCTGGGCCAAGCGCTGCAGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: FASSHLPSHTCC*MWIWAKRCRRA
Trigger: TGCCCGCCTGCAGCGCTTGGCCCAGATCCACATTCAGCAGCAGGTATGGGAGGGGAGATGACTAGAAGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378913.6
ENST00000479399.5
CDS GCA 72 bp ATGTGGATCTGGGCCAAGCGCTGCAGGCGGGCAGCATaGTCAGGAACGGCTGCTAGGATGAATTGCAGCTTA +
Preference number: 6 (lower is better)
Translates to: MWIWAKRCRRAA*SGTAARMNCSL
Trigger: TAAGCTGCAATTCATCCTAGCAGCCGTTCCTGAGCATGCTGCCCGCCTGCAGCGCTTGGCCCAGATCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378916.8
ENST00000421919.5
CDS GCA 72 bp ATGTGGATCTGGGCCAAGCGCTGCAGGCGGGCAGCATaGTCAGGAACGGCTGTAAAACACAACACACACTGC +
Preference number: 6 (lower is better)
Translates to: MWIWAKRCRRAA*SGTAVKHNTHC
Trigger: GCAGTGTGTGTTGTGTTTTACAGCCGTTCCTGAGCATGCTGCCCGCCTGCAGCGCTTGGCCCAGATCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472418.5
ENST00000479399.5
CDS CAA 72 bp GCCAGGTCCCTAAGCTGGAATCCAACACGCCAAGGCTaGGCCACCATGCTGGGCTCAAAGCTTAAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: ARSLSWNPTRQG*ATMLGSKLKAV
Trigger: GACAGCCTTAAGCTTTGAGCCCAGCATGGTGGCCAAGCCTTGGCGTGTTGGATTCCAGCTTAGGGACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS GCA 72 bp GGTGCACATTTCCATCCTGCCCCCAACTCTCCTGGATaGCTCAGGTCTGACCCATCTGAGCCTAATGAGCCT +
Preference number: 6 (lower is better)
Translates to: GAHFHPAPNSPG*LRSDPSEPNEP
Trigger: AGGCTCATTAGGCTCAGATGGGTCAGACCTGAGGCATCCAGGAGAGTTGGGGGCAGGATGGAAATGTGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472074.1
ENST00000479399.5
CDS CCA 72 bp AGCCCATGTAAGGGCCTGAGGACCTGGCAAGGGAGATaGCTAGGTCCTAGAGCTTTGGACAGTGACTCTGTC +
Preference number: 6 (lower is better)
Translates to: SPCKGLRTWQGR*LGPRALDSDSV
Trigger: GACAGAGTCACTGTCCAAAGCTCTAGGACCTAGCCATCTCCCTTGCCAGGTCCTCAGGCCCTTACATGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472074.1
ENST00000479399.5
CDS CCA 72 bp ACAGGGAGTCTGAAGATGGATGCCAGGTCCCTAAGCTaGAATCCAACACGCCAAGGCTTGGCCACCATGCTG +
Preference number: 6 (lower is better)
Translates to: TGSLKMDARSLS*NPTRQGLATML
Trigger: CAGCATGGTGGCCAAGCCTTGGCGTGTTGGATTCCAGCTTAGGGACCTGGCATCCATCTTCAGACTCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS GCA 72 bp GTGGCGGCCTCTAGCTGGCAAAGTAGCTCATCCCACTaGACGAATTGCTTGGAGAGAAGCATTGTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: VAASSWQSSSSH*TNCLERSIVWL
Trigger: CAACCAGACAATGCTTCTCTCCAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477738.6
ENST00000481438.1
CDS CAA 90 bp AAGATGGATGCCAGGTCCCTAAGCTGGAATCCAACACGCCAAGGCTaGGCCACCATGCTGGGCTCAAAGCTTAAGGCTGTCAGATACTCA +
Preference number: 6 (lower is better)
Translates to: KMDARSLSWNPTRQG*ATMLGSKLKAVRYS
Trigger: TGAGTATCTGACAGCCTTAAGCTTTGAGCCCAGCATGGTGGCCAAGCCTTGGCGTGTTGGATTCCAGCTTAGGGACCTGGCATCCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS GCA 72 bp CTGTGCTTAACCTCCCCGACGACCCACATCCTCAGATaGATGTACACATGTAGTCCAGCATTACCTGCTAGG +
Preference number: 6 (lower is better)
Translates to: LCLTSPTTHILR*MYTCSPALPAR
Trigger: CCTAGCAGGTAATGCTGGACTACATGTGTACATGCATCTGAGGATGTGGGTCGTCGGGGAGGTTAAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378911.3
CDS GCA 72 bp CCAGTGAGGAGAGCAGGATCTGGGCTAGGCCCTGTATaGACACGGGATTTCAATGCACTGAAATCCATAGAG +
Preference number: 6 (lower is better)
Translates to: PVRRAGSGLGPV*TRDFNALKSIE
Trigger: CTCTATGGATTTCAGTGCATTGAAATCCCGTGTGCATACAGGGCCTAGCCCAGATCCTGCTCTCCTCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS CCA 72 bp GGCACCAAGGCATTCACCTGCTCCAGGAGTGCAACCTaGGAAAGGATAAACTGCTCCTCTGCTAGGATGAAT +
Preference number: 6 (lower is better)
Translates to: GTKAFTCSRSAT*ERINCSSARMN
Trigger: ATTCATCCTAGCAGAGGAGCAGTTTATCCTTTCCCAGGTTGCACTCCTGGAGCAGGTGAATGCCTTGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378913.6
ENST00000477738.6
CDS CCA 72 bp GGTCCTGTAGGGCCAAAGTGTAGCACAGAAAGGAACTaGGCAAAGCCCACATCTTCCACTAAACTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: GPVGPKCSTERN*AKPTSSTKLPA
Trigger: GGCAGGAAGTTTAGTGGAAGATGTGGGCTTTGCCCAGTTCCTTTCTGTGCTACACTTTGGCCCTACAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341694.6
ENST00000479399.5
CDS TCA 72 bp TGTTGTATTCCTCCAGGAGAGCCTTGGACTCCTCAGTaGTTTCCACACACTGGTCCTGCTGCTGAATGTGGA +
Preference number: 6 (lower is better)
Translates to: CCIPPGEPWTPQ*FPHTGPAAECG
Trigger: TCCACATTCAGCAGCAGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGAATACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259632.12
ENST00000378916.8
ENST00000421919.5
ENST00000472074.1
ENST00000472418.5
ENST00000481438.1
CDS TCA 72 bp TGTTGTATTCCTCCAGGAGAGCCTTGGACTCCTCAGTaGTTTCCACACACTGGTCCTGTAGGGCCAAAGTGT +
Preference number: 6 (lower is better)
Translates to: CCIPPGEPWTPQ*FPHTGPVGPKC
Trigger: ACACTTTGGCCCTACAGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGAATACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341694.6
ENST00000479399.5
CDS CAA 72 bp ATGGACAAGATAGTTGCAGTGAAGCAAACCTGGGCATaGCTAATCAGCCCATGTAAGGGCCTGAGGACCTGG +
Preference number: 6 (lower is better)
Translates to: MDKIVAVKQTWA*LISPCKGLRTW
Trigger: CCAGGTCCTCAGGCCCTTACATGGGCTGATTAGCAATGCCCAGGTTTGCTTCACTGCAACTATCTTGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472074.1
ENST00000479399.5
CDS CAA 72 bp TGTAATCCTAGCTACTTGGGAGGCAAGGTGGGAAGTTaGTTTGAACCAGGAGGCAGCGGTTGCAGTGAGTCA +
Preference number: 6 (lower is better)
Translates to: CNPSYLGGKVGS*FEPGGSGCSES
Trigger: TGACTCACTGCAACCGCTGCCTCCTGGTTCAAACAAACTTCCCACCTTGCCTCCCAAGTAGCTAGGATTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS CAA 72 bp AAATCTGGGTTCTGCAGCACCTTGAAGAAGAGATGCTaGGGGGTAGGTAGAAGGCAGAAGGAATCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: KSGFCSTLKKRC*GVGRRQKESPE
Trigger: CTCTGGGGATTCCTTCTGCCTTCTACCTACCCCCAAGCATCTCTTCTTCAAGGTGCTGCAGAACCCAGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS CAA 72 bp CCCCAGTGCTATAAGCAGGACCAGGTAAAGAGAGCTTaGGCTATTATAGGACCTGTCCCTTTGCTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: PQCYKQDQVKRA*AIIGPVPLLSA
Trigger: GGCTGAGAGCAAAGGGACAGGTCCTATAATAGCCAAAGCTCTCTTTACCTGGTCCTGCTTATAGCACTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS TCA 72 bp CAGAGTAGTGAAGCTATAACCCCAGAGAGATACCTTTaGTGTGAGCACTGTCCAGCATGGGCACCAAGGCAT +
Preference number: 6 (lower is better)
Translates to: QSSEAITPERYL*CEHCPAWAPRH
Trigger: ATGCCTTGGTGCCCATGCTGGACAGTGCTCACATCAAAGGTATCTCTCTGGGGTTATAGCTTCACTACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS GCA 72 bp TGGGAAAGGATAAACTGCTCCTCTGCTAGGATGAATTaGAGCTTAGAGGCATCAGGTATGGCAATGCGGTCG +
Preference number: 6 (lower is better)
Translates to: WERINCSSARMN*SLEASGMAMRS
Trigger: CGACCGCATTGCCATACCTGATGCCTCTAAGCTGCAATTCATCCTAGCAGAGGAGCAGTTTATCCTTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000341694.6
ENST00000378913.6
ENST00000477738.6
CDS GCA 72 bp GACCTGGCAGAGACTCTGATAGTAAAATCTGGGTTCTaGAGCACCTTGAAGAAGAGATGCTTGGGGGTAGGT +
Preference number: 6 (lower is better)
Translates to: DLAETLIVKSGF*STLKKRCLGVG
Trigger: ACCTACCCCCAAGCATCTCTTCTTCAAGGTGCTGCAGAACCCAGATTTTACTATCAGAGTCTCTGCCAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS CCA 72 bp GGCACCAAGGCATTCACCTGCTCCAGGAGTGCAACCTaGGAAAGGATAAACTGCTCCTCTAAAGCAAAAATG +
Preference number: 6 (lower is better)
Translates to: GTKAFTCSRSAT*ERINCSSKAKM
Trigger: CATTTTTGCTTTAGAGGAGCAGTTTATCCTTTCCCAGGTTGCACTCCTGGAGCAGGTGAATGCCTTGGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472074.1
ENST00000479399.5
CDS CAA 72 bp AGCATTGTAGTCTTGTTGTATTCCTCCAGGAGAGCCTaGGACTCCTCAGTGATTTCCACACACTGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: SIVVLLYSSRRA*DSSVISTHWSC
Trigger: GCAGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGAATACAACAAGACTACAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259632.12
ENST00000378916.8
ENST00000421919.5
ENST00000472418.5
CDS CAA 72 bp AAGGATACAGTCTTGTTGTATTCCTCCAGGAGAGCCTaGGACTCCTCAGTGATTTCCACACACTGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: KDTVLLYSSRRA*DSSVISTHWSC
Trigger: GCAGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGAATACAACAAGACTGTATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481438.1
CDS CAA 90 bp TTGGAGAGAAGCATTGTAGTCTTGTTGTATTCCTCCAGGAGAGCCTaGGACTCCTCAGTGATTTCCACACACTGGTCCTGTAGGGCCAAA +
Preference number: 6 (lower is better)
Translates to: LERSIVVLLYSSRRA*DSSVISTHWSCRAK
Trigger: TTTGGCCCTACAGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGAATACAACAAGACTACAATGCTTCTCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341694.6
ENST00000479399.5
CDS CAA 90 bp AAAGCAAAAATGGACAAGATAGTTGCAGTGAAGCAAACCTGGGCATaGCTAATCAGCCCATGTAAGGGCCTGAGGACCTGGCAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: KAKMDKIVAVKQTWA*LISPCKGLRTWQGR
Trigger: TCTCCCTTGCCAGGTCCTCAGGCCCTTACATGGGCTGATTAGCAATGCCCAGGTTTGCTTCACTGCAACTATCTTGTCCATTTTTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472074.1
ENST00000479399.5
CDS GCA 72 bp TACACATGTAGTCCAGCATTACCTGCTAGGATGAATTaGAGCTTAGAGGCATCAGGTATGGCAATGCGGTCG +
Preference number: 6 (lower is better)
Translates to: YTCSPALPARMN*SLEASGMAMRS
Trigger: CGACCGCATTGCCATACCTGATGCCTCTAAGCTGCAATTCATCCTAGCAGGTAATGCTGGACTACATGTGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378911.3
CDS CAA 72 bp AGCATTGTAGTCTTGTTGTATTCCTCCAGGAGAGCCTaGGACTCCTCAGTGATTTCCACACACTGGTCCTGT +
Preference number: 6 (lower is better)
Translates to: SIVVLLYSSRRA*DSSVISTHWSC
Trigger: ACAGGACCAGTGTGTGGAAATCACTGAGGAGTCCAAGGCTCTCCTGGAGGAATACAACAAGACTACAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341694.6
ENST00000479399.5
CDS CAA 72 bp GATGGATATCTGGATTCAATTAAAGCCACTATCTGCTaGTCAAAGTCCAGGCCCAGGGACTGCTCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: DGYLDSIKATIC*SKSRPRDCSQQ
Trigger: CTGCTGAGAGCAGTCCCTGGGCCTGGACTTTGACAAGCAGATAGTGGCTTTAATTGAATCCAGATATCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS GCA 72 bp AAAAGAGATATGTGGCAGACTACGCCAGGCAGGTTCTaGTCAGTGGCTCTCAGAGGCATAGACAATTATATG +
Preference number: 6 (lower is better)
Translates to: KRDMWQTTPGRF*SVALRGIDNYM
Trigger: CATATAATTGTCTATGCCTCTGAGAGCCACTGAGCAGAACCTGCCTGGCGTAGTCTGCCACATATCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS GCA 72 bp CAAGATGGATATCTGGATTCAATTAAAGCCACTATCTaGTTGTCAAAGTCCAGGCCCAGGGACTGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: QDGYLDSIKATI*LSKSRPRDCSQ
Trigger: CTGAGAGCAGTCCCTGGGCCTGGACTTTGACAAGCAGATAGTGGCTTTAATTGAATCCAGATATCCATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS CCA 72 bp TGCACACGGGATTTCAATGCACTGAAATCCATAGAGTaGGAAGGGTATTCAAGAGAGAGGACTGTTACGTGC +
Preference number: 6 (lower is better)
Translates to: CTRDFNALKSIE*EGYSRERTVTC
Trigger: GCACGTAACAGTCCTCTCTCTTGAATACCCTTCCCACTCTATGGATTTCAGTGCATTGAAATCCCGTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS CCA 72 bp ATTCATGGACCTGGCAGAGACTCTGATAGTAAAATCTaGGTTCTGCAGCACCTTGAAGAAGAGATGCTTGGG +
Preference number: 6 (lower is better)
Translates to: IHGPGRDSDSKI*VLQHLEEEMLG
Trigger: CCCAAGCATCTCTTCTTCAAGGTGCTGCAGAACCCAGATTTTACTATCAGAGTCTCTGCCAGGTCCATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479399.5
CDS CCA 72 bp TGGGCTCTCTATCCTGGTAATTTTAATTGGTGGATGTaGCAAGTACCTCAGGGTGAGGATAAAGATAAGGAA +
Preference number: 6 (lower is better)
Translates to: WALYPGNFNWWM*QVPQGEDKDKE
Trigger: TTCCTTATCTTTATCCTCACCCTGAGGTACTTGCCACATCCACCAATTAAAATTACCAGGATAGAGAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479399.5