RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCTD (Homo sapiens)

Ensembl gene IDs: ENSG00000129187

Ensembl transcript IDs: ENST00000357067.7, ENST00000438320.7, ENST00000500813.6, ENST00000503182.5, ENST00000503820.5, ENST00000503988.1, ENST00000507543.5, ENST00000507631.5, ENST00000508994.1, ENST00000509218.5, ENST00000509757.5, ENST00000510307.5, ENST00000513348.5, ENST00000513383.5, ENST00000514754.5

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGGCTGCCGGATCGCAGCAGATGACAGACAGCTGATGCTCCTCTaGAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGA +
Preference number: 1 (lower is better)
Translates to: RGCRIAADDRQLMLL*RATSIPASQDTRRG
Trigger: TCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGGCAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR GCA 90 bp AAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTaGCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCT +
Preference number: 1 (lower is better)
Translates to: KYSWFSYTPRLSGQM*HPISDSGRVAGGFP
Trigger: AGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 90 bp AAGCATGGAGCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTaGAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACT +
Preference number: 1 (lower is better)
Translates to: KHGARAQKSSEHQQC*SKLSPRGWNFSQST
Trigger: AGTGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGCTCCATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 90 bp CTCCGCATGGCACACGTACGGGTATTTGGTGTCCAGCTTATTCTCTaGTGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGG +
Preference number: 1 (lower is better)
Translates to: LRMAHVRVFGVQLIL*CPSPRQHVITAPIW
Trigger: CCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGCTGGACACCAAATACCCGTACGTGTGCCATGCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR CCA 90 bp ACCACCCTGTGTGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTaGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCT +
Preference number: 1 (lower is better)
Translates to: TTLCAVGEQEWRKYS*FSYTPRLSGQMCHP
Trigger: AGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCACACAGGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 90 bp TTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCAGTTaGAGAGGGGCCTTGTACATGAACTGCGTTGGCATGCGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: FSQSTHGIGINFLSS*RGALYMNCVGMRRR
Trigger: CCTCCTCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 90 bp CCAGCTTATTCTCTGCTGTCCTTCTCCAAGGCAACACGTCATCACTaGACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGT +
Preference number: 1 (lower is better)
Translates to: PAYSLLSFSKATRHH*THLASHCTQSRQSC
Trigger: ACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
3UTR TCA 90 bp CCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTaGATTCACGATGCAGGCGCCGACCTGGGAATTTGGATCTTTGCT +
Preference number: 1 (lower is better)
Translates to: PIWHPIVPNPDNLVF*IHDAGADLGIWIFA
Trigger: AGCAAAGATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR GCA 90 bp GAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAATaGTACTGTCATTTGAGGCCTAATTTTCTTCCAAGGGCACTATAT +
Preference number: 1 (lower is better)
Translates to: EGGWGFPSTLQQTLQ*YCHLRPNFLPRALY
Trigger: ATATAGTGCCCTTGGAAGAAAATTAGGCCTCAAATGACAGTAGCATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 90 bp CCGGAATGTCACCCCGGCCATATTAAACAGGAGCCTCGCAGCAGTTaGCTCGTCACTATCATGGTATTTATCAGACATGAAAATCACTTC +
Preference number: 1 (lower is better)
Translates to: PECHPGHIKQEPRSS*LVTIMVFIRHENHF
Trigger: GAAGTGATTTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCTGTTTAATATGGCCGGGGTGACATTCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR CCA 90 bp AGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTaGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTC +
Preference number: 1 (lower is better)
Translates to: SSEHQQCCSKLSPRG*NFSQSTHGIGINFL
Trigger: GAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR TCA 90 bp CAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGTTCATaGTGGCATTCAGCTCCGCATGGCACACGTACGGGTATTTGGTGT +
Preference number: 1 (lower is better)
Translates to: QHTYYSLSHRSNFCS*WHSAPHGTRTGIWC
Trigger: ACACCAAATACCCGTACGTGTGCCATGCGGAGCTGAATGCCATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR GCA 90 bp TATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTaGTCGTCCCCATTAAGAACACAACCACAATTATTTATTTGTCCT +
Preference number: 1 (lower is better)
Translates to: YMPCFTWARCSDQCV*SSPLRTQPQLFICP
Trigger: AGGACAAATAAATAATTGTGGTTGTGTTCTTAATGGGGACGAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR TCA 90 bp ATGAGATGTAACTCACTGAAGCTTTTGACTCGGTCTGCTGTTAATTaGATCAAAGTCAATGACAATCTTGCTGCACTTCGGTATGAATTT +
Preference number: 1 (lower is better)
Translates to: MRCNSLKLLTRSAVN*IKVNDNLAALRYEF
Trigger: AAATTCATACCGAAGTGCAGCAAGATTGTCATTGACTTTGATTCAATTAACAGCAGACCGAGTCAAAAGCTTCAGTGAGTTACATCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR CCA 90 bp CTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCACCACGGCAGGGCATaGGCTTTGGGGGCAACAAGG +
Preference number: 2 (lower is better)
Translates to: LLVCQDRCATLSRIPGGWHHGRA*ALGATR
Trigger: CCTTGTTGCCCCCAAAGCCCATGCCCTGCCGTGGTG...CCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR TCA 90 bp AAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGGCTCCCCTCAGATGACAGACAGCTaGTGCTCCTCTGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: KGRHSRSSPVHQATTGSPQMTDS*CSSEEP
Trigger: TGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTG...AGGGGAGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR GCA 90 bp CGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGCCCAGAGGGATAATGTaGCACCACCCTGTGTGCAGT +
Preference number: 2 (lower is better)
Translates to: RLSGQMCHPISDSGRVAGPRGIM*HHPVCS
Trigger: ACTGCACACAGGGTGGTGGCACATTATCCCTCTGGG...CCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp CCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCAGATGACAGACAGCGGATTCCGGGAGGGTaGCTGGGGGTTTCCCTCAAC +
Preference number: 2 (lower is better)
Translates to: PAHVAVKRGCRIAADDRQRIPGG*LGVSLN
Trigger: GTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCG...CTGTCTGTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp CCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCAGATGACAGACAGCTCGTTCTAGCCCTGTaGACCAGGCCACCACAGGCT +
Preference number: 2 (lower is better)
Translates to: PAHVAVKRGCRIAADDRQLVLAL*TRPPQA
Trigger: AGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAG...CTGTCTGTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR CCA 90 bp GCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCAGCAGGGCATGGGCTTTaGGGGCAACAAGGAGAGACA +
Preference number: 2 (lower is better)
Translates to: ARAQKSSEHQQCCSKLSPAGHGL*GQQGET
Trigger: TGTCTCTCCTTGTTGCCCCCAAAGCCCATGCCCTGC...TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp AAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTGCATTCAGCTCCGCATaGCACACGTACGGGTATTTG +
Preference number: 2 (lower is better)
Translates to: KSHQHPSQPGHKKGRHSRAFSSA*HTYGYL
Trigger: CAAATACCCGTACGTGTGCCATGCGGAGCTGAATGC...ACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR TCA 90 bp GATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAATCCGGATCGCAGCAGATaGCAGACAGCTGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: DSGRVAGGFPQLCSKHFNPDRSR*QTADAP
Trigger: AGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGG...ATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp ATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTCCCCACTCGTTCTAGCCCTGTaGACCAGGCCACCACAGGCT +
Preference number: 2 (lower is better)
Translates to: MPCFTWARCSDQCVCSSPLVLAL*TRPPQA
Trigger: AGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAG...TGGGGACGAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGGCTCCCCTTCAGATCAGTGTGTCTaGTCGTCCCCATTAAGAACA +
Preference number: 2 (lower is better)
Translates to: KGRHSRSSPVHQATTGSPSDQCV*SSPLRT
Trigger: TGTTCTTAATGGGGACGAGCAGACACACTGATCTGA...AGGGGAGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp CCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCAGATGACAGACAGGAGCCTCGCAGCAGTTaGCTCGTCACTATCATGGTA +
Preference number: 2 (lower is better)
Translates to: PAHVAVKRGCRIAADDRQEPRSS*LVTIMV
Trigger: TACCATGATAGTGACGAGGCAACTGCTGCGAGGCTC...CTGTCTGTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR GCA 90 bp TGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGGCATCCCATTGTAAGGCATCTGCTACAGTaGAGGGCGGCAGTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: CPSPRQHVITAPIWHPIVRHLLQ*RAAVPG
Trigger: GCCAGGCACTGCCGCCCTGCACTGTAGCAGATGCCT...TACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513348.5
3UTR-3UTR CCA 90 bp AGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCAATGCCATGCTTCACTTaGGCCAGATGTTCAGATCAG +
Preference number: 2 (lower is better)
Translates to: SQDTRRGGTLVLALCTRPMPCFT*ARCSDQ
Trigger: CTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT...TGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp AGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAGCAACACATCCATGTTaGGGACCCCTCCCATCCACA +
Preference number: 2 (lower is better)
Translates to: RRAPNTNSAAVSCLHVGGATHPC*GPLPST
Trigger: TGTGGATGGGAGGGGTCCCCAACATGGATGTGTTGC...TCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp CCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTCATGTTGGGTCAAGGGAGGGGGAGCCATaGGGGGCGAGGGAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: PFQIVVPFLAGNFTHVGSREGEP*GAREEQ
Trigger: CTGCTCTTCCCTCGCCCCCCATGGCTCCCCCTCCCT...TGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513348.5
3UTR-3UTR TCA 90 bp TGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATGAGGGGCCTTGTACATaGACTGCGTTGGCATGCGGA +
Preference number: 2 (lower is better)
Translates to: WFSYTPRLSGQMCHPISDEGPCT*TALACG
Trigger: TCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTC...ATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp GCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCATCCAAGGGCACTATATaGCATGCTTCACTTGGGCCA +
Preference number: 2 (lower is better)
Translates to: ARAQKSSEHQQCCSKLSPSKGTI*HASLGP
Trigger: TGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGA...TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp GGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTGCCACCACCCTGTGTaGAGTGGGAGAGCAGGAATG +
Preference number: 2 (lower is better)
Translates to: GHYMPCFTWARCSDQCVCCHHPV*SGRAGM
Trigger: CATTCCTGCTCTCCCACTGCACACAGGGTGGTGGCA...GCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGT +
Preference number: 2 (lower is better)
Translates to: KSHQHPSQPGHKKGRHSRSRPVS*RKLHSC
Trigger: ACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACT...ACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR CCA 90 bp CTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTGTGGGAGAGCAGGAATaGAGGAAATATTCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: LGFREGGWGFPSTLQQTLVGEQE*RKYSWF
Trigger: GAACCAGGAATATTTCCTCCATTCCTGCTCTCCCAC...AAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp GGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCGCAGGGCATGGGCTTTaGGGGCAACAAGGAGAGACA +
Preference number: 2 (lower is better)
Translates to: GHYMPCFTWARCSDQCVCAGHGL*GQQGET
Trigger: TGTCTCTCCTTGTTGCCCCCAAAGCCCATGCCCTGC...GCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR TCA 90 bp ACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACCGGATCGCAGCAGATaGCAGACAGCTGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: TNSAAVSCLHVGGISHNPPDRSR*QTADAP
Trigger: AGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGG...TGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR TCA 90 bp GTGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCCCGGATCGCAGCAGATaGCAGACAGCTGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: VQWESRNGGNIPGSVTLLPDRSR*QTADAP
Trigger: AGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGG...GAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR TCA 90 bp CCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAATCTTCTGGAGATTaGATGAGATGTAACTCACTG +
Preference number: 2 (lower is better)
Translates to: PPYLGFREGGWGFPSTLQQSSGD*MRCNSL
Trigger: CAGTGAGTTACATCTCATTCAATCTCCAGAAGATTG...CTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTACTCGTTCTAGCCCTGTaGACCAGGCCACCACAGGCT +
Preference number: 2 (lower is better)
Translates to: NIPGSVTLLVCQDRCATLLVLAL*TRPPQA
Trigger: AGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAG...TAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp ATGGAGCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTGGGCACTATATGCCATaGTTCACTTGGGCCAGATGT +
Preference number: 2 (lower is better)
Translates to: MEPGHRRAPNTNSAAVSCGHYMP*FTWARC
Trigger: ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC...ACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp TGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTGCCACCACCCTGTGTaGAGTGGGAGAGCAGGAATG +
Preference number: 2 (lower is better)
Translates to: CSGRAGMEEIFLVQLHSSCHHPV*SGRAGM
Trigger: CATTCCTGCTCTCCCACTGCACACAGGGTGGTGGCA...CGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AAAACTTCTGCTTCAGGCTCCACACTTTATTTAGGCATCTGCTACAGTGCAGGGAGGCATCTGCTACAGTaGAGGGCGGCAGTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: KTSASGSTLYLGICYSAGRHLLQ*RAAVPG
Trigger: GCCAGGCACTGCCGCCCTGCACTGTAGCAGATGCCT...CCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR CCA 90 bp GTGCACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAATTCCGGGAGGGTGGCTaGGGGTTTCCCTCAACTCTG +
Preference number: 2 (lower is better)
Translates to: VHQATTGSPILNPKAIVQFREGG*GFPSTL
Trigger: CAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAA...TTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp CATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGTCTTTTATACCTGCCTaGATGATGAGCTTAGCGCAT +
Preference number: 2 (lower is better)
Translates to: HPSQPGHKKGRHSRSSPVSFIPA*MMSLAH
Trigger: ATGCGCTAAGCTCATCATCCAGGCAGGTATAAAAGA...CACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR CCA 90 bp TTCTCCAAGGCAACACGTCATCACTGCACCCATTTGGCATCCCATTGTACCCAAGTCCTGTTAATCCCCTaGGCGCCTTCTCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: FSKATRHHCTHLASHCTQVLLIP*APSPGV
Trigger: CACACCAGGAGAAGGCGCCCAGGGGATTAACAGGAC...TTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513348.5
3UTR-3UTR TCA 90 bp ACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCATGTGTAACTTCAAGATaGAAGGCATTAGCAACCTCT +
Preference number: 2 (lower is better)
Translates to: TLSRIPGGWLGVSLNSAACVTSR*KALATS
Trigger: AGAGGTTGCTAATGCCTTTCATCTTGAAGTTACACA...TGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR TCA 90 bp GACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGTGTGTAACTTCAAGATaGAAGGCATTAGCAACCTCT +
Preference number: 2 (lower is better)
Translates to: DTRRGGTLVLALCTRPPQCVTSR*KALATS
Trigger: AGAGGTTGCTAATGCCTTTCATCTTGAAGTTACACA...CTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR TCA 90 bp TTATTTGTCCTTCCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCACAGATGACAGACAGCTaGTGCTCCTCTGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: LFVLPAHVAVKRGCRIAAQMTDS*CSSEEP
Trigger: TGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTG...TGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGGAAGGACAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR TCA 90 bp AGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACAATCTTCTGGAGATTaGATGAGATGTAACTCACTG +
Preference number: 2 (lower is better)
Translates to: SQDTRRGGTLVLALCTRPQSSGD*MRCNSL
Trigger: CAGTGAGTTACATCTCATTCAATCTCCAGAAGATTG...TGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR GCA 90 bp ACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACCCAGAGGGATAATGTaGCACCACCCTGTGTGCAGT +
Preference number: 2 (lower is better)
Translates to: TNSAAVSCLHVGGISHNPPRGIM*HHPVCS
Trigger: ACTGCACACAGGGTGGTGGCACATTATCCCTCTGGG...TGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACTCGCCTTGTACATGAACTaGGTTGGCATGCGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: NSAAVSCLHVGGISHNPLALYMN*VGMRRR
Trigger: CCTCCTCCGCATGCCAACGCAGTTCATGTACAAGGC...GAGTGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp CTTCTCTGTGCTGATAAGAAGGCCACAGCCATAAAATACTCTGGCCATTCCAAAAGGCATCTGCTACAGTaGAGGGCGGCAGTGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LLCADKKATAIKYSGHSKRHLLQ*RAAVPG
Trigger: GCCAGGCACTGCCGCCCTGCACTGTAGCAGATGCCT...TTTGGAATGGCCAGAGTATTTTATGGCTGTGGCCTTCTTATCAGCACAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR CCA 90 bp CCACGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCCGGATTCCGGGAGGGTaGCTGGGGGTTTCCCTCAAC +
Preference number: 2 (lower is better)
Translates to: PRGWNFSQSTHGIGINFLRIPGG*LGVSLN
Trigger: GTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCG...GAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp GGCCTAATTTTCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTGCAGGGCATGGGCTTTaGGGGCAACAAGGAGAGACA +
Preference number: 2 (lower is better)
Translates to: GLIFFQGHYMPCFTWARCAGHGL*GQQGET
Trigger: TGTCTCTCCTTGTTGCCCCCAAAGCCCATGCCCTGC...ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGAAAATTAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp TGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGGCAACACATCCATGTTaGGGACCCCTCCCATCCACA +
Preference number: 2 (lower is better)
Translates to: CSGRAGMEEIFLVQLHSSATHPC*GPLPST
Trigger: TGTGGATGGGAGGGGTCCCCAACATGGATGTGTTGC...CGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp CATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGAGCCATAAAATACTCTaGCCATTCCAAATAGTCGTC +
Preference number: 2 (lower is better)
Translates to: HPSQPGHKKGRHSRSSPVSHKIL*PFQIVV
Trigger: GACGACTATTTGGAATGGCCAGAGTATTTTATGGCT...CACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR TCA 90 bp GGGATAGGAATTAATTTTCTCTCCAGTTGCAGAGGGGCCTTGTACATGAACTGCGAGGGGCCTTGTACATaGACTGCGTTGGCATGCGGA +
Preference number: 2 (lower is better)
Translates to: GIGINFLSSCRGALYMNCEGPCT*TALACG
Trigger: TCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTC...GCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp TTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCAGTTGCAGAGGGCTCGTTCTAGCCCTGTaGACCAGGCCACCACAGGCT +
Preference number: 2 (lower is better)
Translates to: FSQSTHGIGINFLSSCRGLVLAL*TRPPQA
Trigger: AGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAG...CCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp TTATTTGTCCTTCCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCAGGGCACTATATGCCATaGTTCACTTGGGCCAGATGT +
Preference number: 2 (lower is better)
Translates to: LFVLPAHVAVKRGCRIAAGHYMP*FTWARC
Trigger: ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC...TGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGGAAGGACAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp GCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACAGCAAACACTTCAATaGTACTGTCATTTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: ARAQKSSEHQQCCSKLSPQQTLQ*YCHLRP
Trigger: AGGCCTCAAATGACAGTAGCATTGAAGTGTTTGCTG...TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp TACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGCTTTATTTAGGCATCTaGTACAGTGCAGGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: YPIPTILFSEFTMQAPTWLYLGI*YSAGRQ
Trigger: CTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAG...CCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR CCA 90 bp CATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGGCCTCGTCACTATCATaGTATTTATCAGACATGAAA +
Preference number: 2 (lower is better)
Translates to: HPSQPGHKKGRHSRSSPVASSLS*YLSDMK
Trigger: TTTCATGTCTGATAAATACCATGATAGTGACGAGGC...CACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR CCA 90 bp TGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGGCATCCCATTGTACATCCATCATCGCTGTaGGGTGCTGGAGAAGTACCT +
Preference number: 2 (lower is better)
Translates to: CPSPRQHVITAPIWHPIVHPSSL*GAGEVP
Trigger: AGGTACTTCTCCAGCACCCCACAGCGATGATGGATG...TACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513348.5
3UTR-3UTR CCA 90 bp AGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATCACTGCACCCATTTaGCATCCCATTGTACCCAAT +
Preference number: 2 (lower is better)
Translates to: RRAPNTNSAAVSCLHVGGITAPI*HPIVPN
Trigger: ATTGGGTACAATGGGATGCCAAATGGGTGCAGTGAT...TCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR CAA 90 bp TCACTGCACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTaGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGA +
Preference number: 2 (lower is better)
Translates to: SLHPFGIPLYPIPTI*FSEFTMQAPTWEFG
Trigger: TCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
3UTR-3UTR TCA 90 bp TTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCAGTTGCAGAGGGCCGGATCGCAGCAGATaGCAGACAGCTGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: FSQSTHGIGINFLSSCRGPDRSR*QTADAP
Trigger: AGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGG...CCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR TCA 90 bp AGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGTGCTGCACTTCGGTATaGATTTCCGGAATGTCACCC +
Preference number: 2 (lower is better)
Translates to: RALYAMLHLGQMFRSVCLCCTSV*ISGMSP
Trigger: GGGTGACATTCCGGAAATTCATACCGAAGTGCAGCA...CAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACTCGGGCACTATATGCCATaGTTCACTTGGGCCAGATGT +
Preference number: 2 (lower is better)
Translates to: NSAAVSCLHVGGISHNPLGHYMP*FTWARC
Trigger: ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC...GAGTGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGACAGCAAACACTTCAATaGTACTGTCATTTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: RRAPNTNSAAVSCLHVGGQQTLQ*YCHLRP
Trigger: AGGCCTCAAATGACAGTAGCATTGAAGTGTTTGCTG...TCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp GGGATAGGAATTAATTTTCTCTCCAGTTGCAGAGGGGCCTTGTACATGAACTGCCCCAGAGGGATAATGTaGCACCACCCTGTGTGCAGT +
Preference number: 2 (lower is better)
Translates to: GIGINFLSSCRGALYMNCPRGIM*HHPVCS
Trigger: ACTGCACACAGGGTGGTGGCACATTATCCCTCTGGG...GCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTAGAGCCTCGCAGCAGTTaGCTCGTCACTATCATGGTA +
Preference number: 2 (lower is better)
Translates to: NIPGSVTLLVCQDRCATLEPRSS*LVTIMV
Trigger: TACCATGATAGTGACGAGGCAACTGCTGCGAGGCTC...TAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp GGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCTTTCTGAATTCACGATaGAGGCGCCGACCTGGGAAT +
Preference number: 2 (lower is better)
Translates to: GGNIPGSVTLLVCQDRCAFLNSR*RRRPGN
Trigger: ATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAA...GGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR GCA 90 bp AACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACTCGCAACACGTCATCACTaGACCCATTTGGCATCCCAT +
Preference number: 2 (lower is better)
Translates to: NSAAVSCLHVGGISHNPLATRHH*THLASH
Trigger: ATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGC...GAGTGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR GCA 90 bp GGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCGTCCAGCTTATTCTCTaGTGTCCTTCTCCAAGGCAA +
Preference number: 2 (lower is better)
Translates to: GHYMPCFTWARCSDQCVCVQLIL*CPSPRQ
Trigger: TTGCCTTGGAGAAGGACAGCAGAGAATAAGCTGGAC...GCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR CCA 90 bp GGAACAACTCATTATTCAGCTAAACGAAATGGAAGAGCTCCATGTGACCAACAACGGATTCCGGGAGGGTaGCTGGGGGTTTCCCTCAAC +
Preference number: 2 (lower is better)
Translates to: GTTHYSAKRNGRAPCDQQRIPGG*LGVSLN
Trigger: GTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCG...TTGTTGGTCACATGGAGCTCTTCCATTTCGTTTAGCTGAATAATGAGTTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp CAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTCATGTTGGGTCACGGAGACATCCATCATCGCTGTaGGGTGCTGGAGAAGTACCT +
Preference number: 2 (lower is better)
Translates to: QIVVPFLAGNFTHVGSRRHPSSL*GAGEVP
Trigger: AGGTACTTCTCCAGCACCCCACAGCGATGATGGATG...TCTCCGTGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR CCA 90 bp TCTCCAAGGCAACACGTCATCACTGCACCCATTTGGCATCCCATTGTACCCAATATGCAGGCGCCGACCTaGGAATTTGGATCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: SPRQHVITAPIWHPIVPNMQAPT*EFGSLL
Trigger: AAGCAAAGATCCAAATTCCCAGGTCGGCGCCTGCAT...ATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
3UTR-3UTR TCA 90 bp AGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAACAGATGACAGACAGCTaGTGCTCCTCTGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: RSLAAVASSLSWYLSDMKQMTDS*CSSEEP
Trigger: TGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTG...TTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR TCA 90 bp CACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAAACACAGATGACAGACAGCTaGTGCTCCTCTGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: HQATTGSPILNPKAIVQTQMTDS*CSSEEP
Trigger: TGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTG...TGTTTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR GCA 90 bp TCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCTTTATTTAGGCATCTaGTACAGTGCAGGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: SHCTQSRQSCFLNSRCRRLYLGI*YSAGRQ
Trigger: CTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAG...GCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR GCA 90 bp AGCTTATTCTCTGCTGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGCAACACGTCATCACTaGACCCATTTGGCATCCCAT +
Preference number: 2 (lower is better)
Translates to: SLFSAVLLQGNTSSLHPFATRHH*THLASH
Trigger: ATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGC...AAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
3UTR-3UTR CCA 90 bp TGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGATGCCATGCTTCACTTaGGCCAGATGTTCAGATCAG +
Preference number: 2 (lower is better)
Translates to: CSGRAGMEEIFLVQLHSSMPCFT*ARCSDQ
Trigger: CTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT...CGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp TGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGGTGGGAGAGCAGGAATaGAGGAAATATTCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: CSGRAGMEEIFLVQLHSSVGEQE*RKYSWF
Trigger: GAACCAGGAATATTTCCTCCATTCCTGCTCTCCCAC...CGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp CAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATGAAAGGCGAGGAATGTaGTCTAAAGGAAGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: QSRQSCFLNSRCRRRPGNERRGM*SKGRQA
Trigger: TGCTTGCCTTCCTTTAGACCACATTCCTCGCCTTTC...ATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR CAA 90 bp TCTCTGCTGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTaGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: SLLSFSKATRHHCTH*ASHCTQSRQSCFLN
Trigger: ATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
3UTR-3UTR TCA 90 bp CCACGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCCAGATGACAGACAGCTaGTGCTCCTCTGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: PRGWNFSQSTHGIGINFLQMTDS*CSSEEP
Trigger: TGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTG...GAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp ACAACTCATTATTCAGCTAAACGAAATGGAAGAGCTCCATGTGACCAACAAACCGCAGTGAAGAGAGGCTaGCGGATCGCAGCAGATGAC +
Preference number: 2 (lower is better)
Translates to: TTHYSAKRNGRAPCDQQTAVKRG*RIAADD
Trigger: GTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGC...GGTTTGTTGGTCACATGGAGCTCTTCCATTTCGTTTAGCTGAATAATGAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGTCAGATCAGTGTGTCTaGTCGTCCCCATTAAGAACA +
Preference number: 2 (lower is better)
Translates to: RALYAMLHLGQMFRSVCLSDQCV*SSPLRT
Trigger: TGTTCTTAATGGGGACGAGCAGACACACTGATCTGA...CAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp GTGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGGTTTCCCTCAACTCTaGAGCAAACACTTCAATGCT +
Preference number: 2 (lower is better)
Translates to: VQWESRNGGNIPGSVTLLGFPQL*SKHFNA
Trigger: AGCATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACC...GAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp GCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTGGTTTCCCTCAACTCTaGAGCAAACACTTCAATGCT +
Preference number: 2 (lower is better)
Translates to: AVGEQEWRKYSWFSYTPRGFPQL*SKHFNA
Trigger: AGCATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACC...ACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp ACAACTCATTATTCAGCTAAACGAAATGGAAGAGCTCCATGTGACCAACAAACCTGCCACCACCCTGTGTaGAGTGGGAGAGCAGGAATG +
Preference number: 2 (lower is better)
Translates to: TTHYSAKRNGRAPCDQQTCHHPV*SGRAGM
Trigger: CATTCCTGCTCTCCCACTGCACACAGGGTGGTGGCA...GGTTTGTTGGTCACATGGAGCTCTTCCATTTCGTTTAGCTGAATAATGAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp CCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTCATGTTGGGTCACTTTATTTAGGCATCTaGTACAGTGCAGGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: PFQIVVPFLAGNFTHVGSLYLGI*YSAGRQ
Trigger: CTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAG...TGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR CCA 90 bp GGCCTAATTTTCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTATGCCATGCTTCACTTaGGCCAGATGTTCAGATCAG +
Preference number: 2 (lower is better)
Translates to: GLIFFQGHYMPCFTWARCMPCFT*ARCSDQ
Trigger: CTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT...ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGAAAATTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp CCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGCATCCATCATCGCTGTaGGGTGCTGGAGAAGTACCT +
Preference number: 2 (lower is better)
Translates to: PFGIPLYPIPTILFSEFTHPSSL*GAGEVP
Trigger: AGGTACTTCTCCAGCACCCCACAGCGATGATGGATG...CGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR CCA 90 bp CTGCACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAAGCCGACCTGGGAATTTaGATCTTTGCTTCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: LHPFGIPLYPIPTILFSEADLGI*IFASLC
Trigger: GCACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGC...TTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507543.5
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR TCA 90 bp GGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCTCGAATTTTTGTTCATaGTGGCATTCAGCTCCGCAT +
Preference number: 2 (lower is better)
Translates to: GRAGMEEIFLVQLHSSSVSNFCS*WHSAPH
Trigger: ATGCGGAGCTGAATGCCATCATGAACAAAAATTCGA...GACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR GCA 90 bp AAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTTCAGATCAGTGTGTCTaGTCGTCCCCATTAAGAACA +
Preference number: 2 (lower is better)
Translates to: KYSWFSYTPRLSGQMCHPSDQCV*SSPLRT
Trigger: TGTTCTTAATGGGGACGAGCAGACACACTGATCTGA...AGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp GCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCCACTTCTTTTATACCTaGCTGGATGATGAGCTTAGC +
Preference number: 2 (lower is better)
Translates to: ALYAMLHLGQMFRSVCLLHFFYT*LDDELS
Trigger: GCTAAGCTCATCATCCAGGCAGGTATAAAAGAAGTG...GAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp CCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGACACTTCTTTTATACCTaGCTGGATGATGAGCTTAGC +
Preference number: 2 (lower is better)
Translates to: PTILFSEFTMQAPTWEFGHFFYT*LDDELS
Trigger: GCTAAGCTCATCATCCAGGCAGGTATAAAAGAAGTG...TCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR CCA 90 bp GCTTATTCTCTGCTGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGTCTTTTATACCTGCCTaGATGATGAGCTTAGCGCAT +
Preference number: 2 (lower is better)
Translates to: AYSLLSFSKATRHHCTHLSFIPA*MMSLAH
Trigger: ATGCGCTAAGCTCATCATCCAGGCAGGTATAAAAGA...CAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR CCA 90 bp TCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTACACGTACGGGTATTTaGTGTCCAGCTTATTCTCTG +
Preference number: 2 (lower is better)
Translates to: SSKGTICHASLGPDVQISTRTGI*CPAYSL
Trigger: CAGAGAATAAGCTGGACACCAAATACCCGTACGTGT...ACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR CAA 90 bp AACAAGGCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTaGTTCATGATGGCATTCAGCTCCGCATGGCACACGTACGGGTAT +
Preference number: 2 (lower is better)
Translates to: NKATYILQPFTSVEF*FMMAFSSAWHTYGY
Trigger: ATACCCGTACGTGTGCCATGCGGAGCTGAATGCCATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGCCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR TCA 90 bp TTATTTGTCCTTCCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCACGGTCTGCTGTTAATTaGATCAAAGTCAATGACAAT +
Preference number: 2 (lower is better)
Translates to: LFVLPAHVAVKRGCRIAARSAVN*IKVNDN
Trigger: ATTGTCATTGACTTTGATTCAATTAACAGCAGACCG...TGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGGAAGGACAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR GCA 90 bp AAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTCAGCAAACACTTCAATaGTACTGTCATTTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: KYSWFSYTPRLSGQMCHPQQTLQ*YCHLRP
Trigger: AGGCCTCAAATGACAGTAGCATTGAAGTGTTTGCTG...AGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AGCTTATTCTCTGCTGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTATCTCCCAAAACTTCTaGTTCAGGCTCCACACTTTA +
Preference number: 2 (lower is better)
Translates to: SLFSAVLLQGNTSSLHPFISQNF*FRLHTL
Trigger: TAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGAT...AAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513348.5
3UTR-3UTR CCA 90 bp CGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCATGCCATGCTTCACTTaGGCCAGATGTTCAGATCAG +
Preference number: 2 (lower is better)
Translates to: RGWNFSQSTHGIGINFLSMPCFT*ARCSDQ
Trigger: CTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT...GGAGAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CCA 90 bp CTTCTCTGTGCTGATAAGAAGGCCACAGCCATAAAATACTCTGGCCATTCCAAAGAAAGGCGAGGAATGTaGTCTAAAGGAAGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: LLCADKKATAIKYSGHSKERRGM*SKGRQA
Trigger: TGCTTGCCTTCCTTTAGACCACATTCCTCGCCTTTC...TTTGGAATGGCCAGAGTATTTTATGGCTGTGGCCTTCTTATCAGCACAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR CCA 90 bp GCTTATTCTCTGCTGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGAGCCATAAAATACTCTaGCCATTCCAAATAGTCGTC +
Preference number: 2 (lower is better)
Translates to: AYSLLSFSKATRHHCTHLSHKIL*PFQIVV
Trigger: GACGACTATTTGGAATGGCCAGAGTATTTTATGGCT...CAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
3UTR-3UTR CCA 90 bp ACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCAGCCGACCTGGGAATTTaGATCTTTGCTTCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: THLASHCTQSRQSCFLNSADLGI*IFASLC
Trigger: GCACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGC...TGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR TCA 90 bp TCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTTGTGTAACTTCAAGATaGAAGGCATTAGCAACCTCT +
Preference number: 2 (lower is better)
Translates to: SSKGTICHASLGPDVQISCVTSR*KALATS
Trigger: AGAGGTTGCTAATGCCTTTCATCTTGAAGTTACACA...ACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR TCA 90 bp ACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACGGTCTGCTGTTAATTaGATCAAAGTCAATGACAAT +
Preference number: 2 (lower is better)
Translates to: TNSAAVSCLHVGGISHNPRSAVN*IKVNDN
Trigger: ATTGTCATTGACTTTGATTCAATTAACAGCAGACCG...TGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp AATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTTCAGATCAGTGTGTCTaGTCGTCCCCATTAAGAACA +
Preference number: 2 (lower is better)
Translates to: NGGNIPGSVTLLVCQDRCSDQCV*SSPLRT
Trigger: TGTTCTTAATGGGGACGAGCAGACACACTGATCTGA...ACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp TCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGGGAATTTGGATCTTTaGTTCTCTGTGCTGATAAGA +
Preference number: 2 (lower is better)
Translates to: SSKGTICHASLGPDVQISGNLDL*FSVLIR
Trigger: TCTTATCAGCACAGAGAAGCAAAGATCCAAATTCCC...ACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR CCA 90 bp TTAAACAGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACTCTTTTATACCTGCCTaGATGATGAGCTTAGCGCAT +
Preference number: 2 (lower is better)
Translates to: LNRSLAAVASSLSWYLSDSFIPA*MMSLAH
Trigger: ATGCGCTAAGCTCATCATCCAGGCAGGTATAAAAGA...GTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR CCA 90 bp TCTCCAAGGCAACACGTCATCACTGCACCCATTTGGCATCCCATTGTACCCAATGCCTCGTCACTATCATaGTATTTATCAGACATGAAA +
Preference number: 2 (lower is better)
Translates to: SPRQHVITAPIWHPIVPNASSLS*YLSDMK
Trigger: TTTCATGTCTGATAAATACCATGATAGTGACGAGGC...ATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR TCA 90 bp CACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAAACATGTGTAACTTCAAGATaGAAGGCATTAGCAACCTCT +
Preference number: 2 (lower is better)
Translates to: HQATTGSPILNPKAIVQTCVTSR*KALATS
Trigger: AGAGGTTGCTAATGCCTTTCATCTTGAAGTTACACA...TGTTTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR GCA 90 bp CTAAAGGAAGGCAAGCATCTCCCAAAACTTCTGCTTCAGGCTCCACACTTTATTATCTCCCAAAACTTCTaGTTCAGGCTCCACACTTTA +
Preference number: 2 (lower is better)
Translates to: LKEGKHLPKLLLQAPHFIISQNF*FRLHTL
Trigger: TAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGAT...AATAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGATGCTTGCCTTCCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR TCA 90 bp CGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCTGTGTAACTTCAAGATaGAAGGCATTAGCAACCTCT +
Preference number: 2 (lower is better)
Translates to: RGWNFSQSTHGIGINFLSCVTSR*KALATS
Trigger: AGAGGTTGCTAATGCCTTTCATCTTGAAGTTACACA...GGAGAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR GCA 90 bp TTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGATCTCCCAAAACTTCTaGTTCAGGCTCCACACTTTA +
Preference number: 2 (lower is better)
Translates to: FGIPLYPIPTILFSEFTMISQNF*FRLHTL
Trigger: TAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGAT...CATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR CCA 90 bp TTGGTAAGGAGCCAAATTACAGAATACCCTAGAATGTGGAATACAAAATCTCAGGTGGGAGAGCAGGAATaGAGGAAATATTCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: LVRSQITEYPRMWNTKSQVGEQE*RKYSWF
Trigger: GAACCAGGAATATTTCCTCCATTCCTGCTCTCCCAC...CTGAGATTTTGTATTCCACATTCTAGGGTATTCTGTAATTTGGCTCCTTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
3UTR-3UTR CCA 90 bp TTGGTAAGGAGCCAAATTACAGAATACCCTAGAATGTGGAATACAAAATCTCAGGCCTCGTCACTATCATaGTATTTATCAGACATGAAA +
Preference number: 2 (lower is better)
Translates to: LVRSQITEYPRMWNTKSQASSLS*YLSDMK
Trigger: TTTCATGTCTGATAAATACCATGATAGTGACGAGGC...CTGAGATTTTGTATTCCACATTCTAGGGTATTCTGTAATTTGGCTCCTTACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500813.6
3UTR CCA 72 bp CCCATCCACAGCCCCAGCTGCCACCACGGCAGGGCATaGGCTTTGGGGGCAACAAGGAGAGACAGGCTGTCT +
Preference number: 3 (lower is better)
Translates to: PIHSPSCHHGRA*ALGATRRDRLS
Trigger: AGACAGCCTGTCTCTCCTTGTTGCCCCCAAAGCCCATGCCCTGCCGTGGTGGCAGCTGGGGCTGTGGATGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp AAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGGCTCCCCTGGAGCCTCGCAGCAGTaGCCTCGTCACTATCATGGT +
Preference number: 3 (lower is better)
Translates to: KGRHSRSSPVHQATTGSPGASQQ*PRHYHG
Trigger: ACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCC...AGGGGAGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR CAA 90 bp CTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGGGCAACACATCCATGTaGGGGACCCCTCCCATCCAC +
Preference number: 3 (lower is better)
Translates to: LLVCQDRCATLSRIPGGWGNTSM*GTPPIH
Trigger: GTGGATGGGAGGGGTCCCCAACATGGATGTGTTGCC...CCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR CCA 72 bp GAGAAGTACCTACTAAATAGGAGGGAGGGGGAGCCATaGGGGGCGAGGGAAGAGCAGGAGAGGGAAGGGTCC +
Preference number: 3 (lower is better)
Translates to: EKYLLNRREGEP*GAREEQEREGS
Trigger: GGACCCTTCCCTCTCCTGCTCTTCCCTCGCCCCCCATGGCTCCCCCTCCCTCCTATTTAGTAGGTACTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513348.5
3UTR-3UTR CAA 90 bp GCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGGAGCCTCGCAGCAGTaGCCTCGTCACTATCATGGT +
Preference number: 3 (lower is better)
Translates to: ATSIPASQDTRRGGTLVLGASQQ*PRHYHG
Trigger: ACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCC...TAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR CAA 90 bp AAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGGCTCCCCTTATGCCATGCTTCACTaGGGCCAGATGTTCAGATCA +
Preference number: 3 (lower is better)
Translates to: KGRHSRSSPVHQATTGSPYAMLH*GQMFRS
Trigger: TGATCTGAACATCTGGCCCAAGTGAAGCATGGCATA...AGGGGAGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 72 bp TGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTaGCACCCTATCTCGGATTCCGGGAGGGTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: WFSYTPRLSGQM*HPISDSGRVAG
Trigger: CCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR CCA 72 bp GACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTaGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACT +
Preference number: 3 (lower is better)
Translates to: DRCATLSRIPGG*LGVSLNSAANT
Trigger: AGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR CCA 72 bp CTCCAGTTGCAGAGGGGCCTTGTACATGAACTGCGTTaGCATGCGGAGGAGGGGCAACACATCCATGTTGGG +
Preference number: 3 (lower is better)
Translates to: LQLQRGLVHELR*HAEEGQHIHVG
Trigger: CCCAACATGGATGTGTTGCCCCTCCTCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR TCA 72 bp TGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCAGATaGCAGACAGCTGATGCTCCTCTGAAGAGCCACCAG +
Preference number: 3 (lower is better)
Translates to: CSSEERLPDRSR*QTADAPLKSHQ
Trigger: CTGGTGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGCTACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR GCA 72 bp GGAGCCAGGGCACAGAAGAGCTCCGAACACCAACAGTaGTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTC +
Preference number: 3 (lower is better)
Translates to: GARAQKSSEHQQ*CSKLSPRGWNF
Trigger: GAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR CCA 72 bp GATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTaGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAA +
Preference number: 3 (lower is better)
Translates to: DVPPYLGFREGG*GFPSTLQQTLQ
Trigger: TTGAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 72 bp TTTCTCTCCAGTTGCAGAGGGGCCTTGTACATGAACTaGGTTGGCATGCGGAGGAGGGGCAACACATCCATG +
Preference number: 3 (lower is better)
Translates to: FLSSCRGALYMN*VGMRRRGNTSM
Trigger: CATGGATGTGTTGCCCCTCCTCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 72 bp GCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTaGAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCA +
Preference number: 3 (lower is better)
Translates to: ARAQKSSEHQQC*SKLSPRGWNFS
Trigger: TGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 72 bp TTTGTCCTTCCAGCACATGTAGCAGTGAAGAGAGGCTaGCGGATCGCAGCAGATGACAGACAGCTGATGCTC +
Preference number: 3 (lower is better)
Translates to: FVLPAHVAVKRG*RIAADDRQLML
Trigger: GAGCATCAGCTGTCTGTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGGAAGGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR GCA 72 bp ACTTCTGCTTCAGGCTCCACACTTTATTTAGGCATCTaGTACAGTGCAGGGCGGCAGTGCCTGGCTTTAGGG +
Preference number: 3 (lower is better)
Translates to: TSASGSTLYLGI*YSAGRQCLALG
Trigger: CCCTAAAGCCAGGCACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR CCA 72 bp CCCCAGAGGGATAATGTGCCACCACCCTGTGTGCAGTaGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCA +
Preference number: 3 (lower is better)
Translates to: PQRDNVPPPCVQ*ESRNGGNIPGS
Trigger: TGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCACACAGGGTGGTGGCACATTATCCCTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp CCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCAGATGACAGACAGTATGCCATGCTTCACTaGGGCCAGATGTTCAGATCA +
Preference number: 3 (lower is better)
Translates to: PAHVAVKRGCRIAADDRQYAMLH*GQMFRS
Trigger: TGATCTGAACATCTGGCCCAAGTGAAGCATGGCATA...CTGTCTGTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp GGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCAGTTGCAGAGGGGCCTaGTACATGAACTGCGTTGGC +
Preference number: 3 (lower is better)
Translates to: GHYMPCFTWARCSDQCVCSCRGA*YMNCVG
Trigger: GCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACT...GCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp GCTTATTCTCTGCTGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGGGAGCCTCGCAGCAGTaGCCTCGTCACTATCATGGT +
Preference number: 3 (lower is better)
Translates to: AYSLLSFSKATRHHCTHLGASQQ*PRHYHG
Trigger: ACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCC...CAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR GCA 72 bp TCTCTGCTGTCCTTCTCCAAGGCAACACGTCATCACTaGACCCATTTGGCATCCCATTGTACCCAATCCCGA +
Preference number: 3 (lower is better)
Translates to: SLLSFSKATRHH*THLASHCTQSR
Trigger: TCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
3UTR CCA 72 bp TGTGCCACCACCCTGTGTGCAGTGGGAGAGCAGGAATaGAGGAAATATTCCTGGTTCAGTTACACTCCTCGT +
Preference number: 3 (lower is better)
Translates to: CATTLCAVGEQE*RKYSWFSYTPR
Trigger: ACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCACACAGGGTGGTGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp CTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGTTTAGATGCCTACTTTaGCCATACTGGCTAGTAAGA +
Preference number: 3 (lower is better)
Translates to: LLVCQDRCATLSRIPGGWFRCLL*PYWLVR
Trigger: TCTTACTAGCCAGTATGGCAAAAGTAGGCATCTAAA...CCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp GCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTATTTAGATGCCTACTTTaGCCATACTGGCTAGTAAGA +
Preference number: 3 (lower is better)
Translates to: ATSIPASQDTRRGGTLVLFRCLL*PYWLVR
Trigger: TCTTACTAGCCAGTATGGCAAAAGTAGGCATCTAAA...TAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR CAA 90 bp GCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAAAGTCAATGACAATCTaGCTGCACTTCGGTATGAAT +
Preference number: 3 (lower is better)
Translates to: ATSIPASQDTRRGGTLVLKSMTI*LHFGMN
Trigger: ATTCATACCGAAGTGCAGCAAGATTGTCATTGACTT...TAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR CAA 90 bp AAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTAAGTCAATGACAATCTaGCTGCACTTCGGTATGAAT +
Preference number: 3 (lower is better)
Translates to: KSHQHPSQPGHKKGRHSRKSMTI*LHFGMN
Trigger: ATTCATACCGAAGTGCAGCAAGATTGTCATTGACTT...ACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR-3UTR CAA 90 bp CCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGAGAAACTTCACTCATGTaGGGTCTGTCTCCCACGGAG +
Preference number: 3 (lower is better)
Translates to: PTILFSEFTMQAPTWEFGETSLM*GLSPTE
Trigger: CTCCGTGGGAGACAGACCCAACATGAGTGAAGTTTC...TCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509218.5
3UTR GCA 72 bp GCACACGTACGGGTATTTGGTGTCCAGCTTATTCTCTaGTGTCCTTCTCCAAGGCAACACGTCATCACTGCA +
Preference number: 3 (lower is better)
Translates to: AHVRVFGVQLIL*CPSPRQHVITA
Trigger: TGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGCTGGACACCAAATACCCGTACGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR CAA 90 bp CCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCAGATGACAGACAGCAATGCTACTGTCATTaGAGGCCTAATTTTCTTCCA +
Preference number: 3 (lower is better)
Translates to: PAHVAVKRGCRIAADDRQQCYCH*RPNFLP
Trigger: TGGAAGAAAATTAGGCCTCAAATGACAGTAGCATTG...CTGTCTGTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp GCTTATTCTCTGCTGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGCATCACTGCACCCATTaGGCATCCCATTGTACCCAA +
Preference number: 3 (lower is better)
Translates to: AYSLLSFSKATRHHCTHLHHCTH*ASHCTQ
Trigger: TTGGGTACAATGGGATGCCAAATGGGTGCAGTGATG...CAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
3UTR TCA 72 bp CATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTaGATTCACGATGCAGGCGCCGACCTGGGAATTTGG +
Preference number: 3 (lower is better)
Translates to: HPIVPNPDNLVF*IHDAGADLGIW
Trigger: CCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR CCA 72 bp CACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTaGAATTTCTCACAATCCACTCACGGGATAGGAATT +
Preference number: 3 (lower is better)
Translates to: HQQCCSKLSPRG*NFSQSTHGIGI
Trigger: AATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR CCA 72 bp AGTCGTCCCGTTTCTTGCAGGAAACTTCACTCATGTTaGGTCTGTCTCCCACGGAGAAATCTTGAGAAAGGC +
Preference number: 3 (lower is better)
Translates to: SRPVSCRKLHSC*VCLPRRNLEKG
Trigger: GCCTTTCTCAAGATTTCTCCGTGGGAGACAGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509218.5
3UTR CCA 72 bp CCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTaGCATCCCATTGTACCCAATCCCGACAATCTTGTT +
Preference number: 3 (lower is better)
Translates to: PSPRQHVITAPI*HPIVPNPDNLV
Trigger: AACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
3UTR-3UTR CAA 90 bp AGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGATTTAGATGCCTACTTTaGCCATACTGGCTAGTAAGA +
Preference number: 3 (lower is better)
Translates to: RRAPNTNSAAVSCLHVGGFRCLL*PYWLVR
Trigger: TCTTACTAGCCAGTATGGCAAAAGTAGGCATCTAAA...TCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp AGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGACAATGCTACTGTCATTaGAGGCCTAATTTTCTTCCA +
Preference number: 3 (lower is better)
Translates to: RRAPNTNSAAVSCLHVGGQCYCH*RPNFLP
Trigger: TGGAAGAAAATTAGGCCTCAAATGACAGTAGCATTG...TCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp ATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTTCCCACGGAGAAATCTaGAGAAAGGCGAGGAATGTG +
Preference number: 3 (lower is better)
Translates to: IPTILFSEFTMQAPTWEFSHGEI*RKARNV
Trigger: CACATTCCTCGCCTTTCTCAAGATTTCTCCGTGGGA...AAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509218.5
3UTR-3UTR CAA 90 bp AGGCGAGGAATGTGGTCTAAAGGAAGGCAAGCATCTCCCAAAACTTCTGCTTCAGGTCACGGAGAAATCTaGAGAAAGGCGAGGAATGTG +
Preference number: 3 (lower is better)
Translates to: RRGMWSKGRQASPKTSASGHGEI*RKARNV
Trigger: CACATTCCTCGCCTTTCTCAAGATTTCTCCGTGACC...TGAAGCAGAAGTTTTGGGAGATGCTTGCCTTCCTTTAGACCACATTCCTCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
3UTR TCA 72 bp TACTACAGCCTTTCACATCGGTCGAATTTTTGTTCATaGTGGCATTCAGCTCCGCATGGCACACGTACGGGT +
Preference number: 3 (lower is better)
Translates to: YYSLSHRSNFCS*WHSAPHGTRTG
Trigger: ACCCGTACGTGTGCCATGCGGAGCTGAATGCCATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR GCA 72 bp TCCACTCACGGGATAGGAATTAATTTTCTCTCCAGTTaGAGAGGGGCCTTGTACATGAACTGCGTTGGCATG +
Preference number: 3 (lower is better)
Translates to: STHGIGINFLSS*RGALYMNCVGM
Trigger: CATGCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCCGTGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 72 bp CACCCCGGCCATATTAAACAGGAGCCTCGCAGCAGTTaGCTCGTCACTATCATGGTATTTATCAGACATGAA +
Preference number: 3 (lower is better)
Translates to: HPGHIKQEPRSS*LVTIMVFIRHE
Trigger: TTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCTGTTTAATATGGCCGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
3UTR CCA 72 bp ATTTTCTTCCAAGGGCACTATATGCCATGCTTCACTTaGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTCC +
Preference number: 3 (lower is better)
Translates to: IFFQGHYMPCFT*ARCSDQCVCSS
Trigger: GGACGAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp CAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATGAAACTTCACTCATGTaGGGTCACGGAGAAATCTTG +
Preference number: 3 (lower is better)
Translates to: QSRQSCFLNSRCRRRPGNETSLM*GHGEIL
Trigger: CAAGATTTCTCCGTGACCCAACATGAGTGAAGTTTC...ATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
3UTR GCA 72 bp AATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGTTGGGTCTGTCTCCCA +
Preference number: 3 (lower is better)
Translates to: NTLAIPNSRPVS*RKLHSCWVCLP
Trigger: TGGGAGACAGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509218.5
3UTR-3UTR CAA 90 bp ACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCAAAGTCAATGACAATCTaGCTGCACTTCGGTATGAAT +
Preference number: 3 (lower is better)
Translates to: TNSAAVSCLHVGGISHNPKSMTI*LHFGMN
Trigger: ATTCATACCGAAGTGCAGCAAGATTGTCATTGACTT...TGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp AATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTAAACTCACTGAAGCTTTaGACTCGGTCTGCTGTTAAT +
Preference number: 3 (lower is better)
Translates to: NIPGSVTLLVCQDRCATLNSLKL*TRSAVN
Trigger: ATTAACAGCAGACCGAGTCAAAAGCTTCAGTGAGTT...TAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp AATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTCACACGTACGGGTATTaGGTGTCCAGCTTATTCTCT +
Preference number: 3 (lower is better)
Translates to: NGGNIPGSVTLLVCQDRCHTYGY*VSSLFS
Trigger: AGAGAATAAGCTGGACACCAAATACCCGTACGTGTG...ACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR CAA 90 bp CATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCGGTCACGGAGAAATCTaGAGAAAGGCGAGGAATGTG +
Preference number: 3 (lower is better)
Translates to: HKILWPFQIVVPFLAGNFGHGEI*RKARNV
Trigger: CACATTCCTCGCCTTTCTCAAGATTTCTCCGTGACC...GAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR CAA 90 bp GAAGGCCACAGCCATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGAAACTTCACTCATGTaGGGTCACGGAGAAATCTTG +
Preference number: 3 (lower is better)
Translates to: EGHSHKILWPFQIVVPFLETSLM*GHGEIL
Trigger: CAAGATTTCTCCGTGACCCAACATGAGTGAAGTTTC...AAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATGGCTGTGGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
3UTR GCA 72 bp TGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAATaGTACTGTCATTTGAGGCCTAATTTTCTTCCAAGG +
Preference number: 3 (lower is better)
Translates to: WGFPSTLQQTLQ*YCHLRPNFLPR
Trigger: CCTTGGAAGAAAATTAGGCCTCAAATGACAGTAGCATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR GCA 72 bp AATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGTTGGGTCACGGAGAAA +
Preference number: 3 (lower is better)
Translates to: NTLAIPNSRPVS*RKLHSCWVTEK
Trigger: TTTCTCCGTGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
3UTR-3UTR CAA 90 bp AAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTTTTAGATGCCTACTTTaGCCATACTGGCTAGTAAGA +
Preference number: 3 (lower is better)
Translates to: KYSWFSYTPRLSGQMCHPFRCLL*PYWLVR
Trigger: TCTTACTAGCCAGTATGGCAAAAGTAGGCATCTAAA...AGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR-3UTR CAA 90 bp GAAGGCCACAGCCATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTTTTAGATGCCTACTTTaGCCATACTGGCTAGTAAGA +
Preference number: 3 (lower is better)
Translates to: EGHSHKILWPFQIVVPFLFRCLL*PYWLVR
Trigger: TCTTACTAGCCAGTATGGCAAAAGTAGGCATCTAAA...AAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATGGCTGTGGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR-3UTR CAA 90 bp TTGGTAAGGAGCCAAATTACAGAATACCCTAGAATGTGGAATACAAAATCTCAGTATGCCATGCTTCACTaGGGCCAGATGTTCAGATCA +
Preference number: 3 (lower is better)
Translates to: LVRSQITEYPRMWNTKSQYAMLH*GQMFRS
Trigger: TGATCTGAACATCTGGCCCAAGTGAAGCATGGCATA...CTGAGATTTTGTATTCCACATTCTAGGGTATTCTGTAATTTGGCTCCTTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
3UTR-3UTR CAA 90 bp AAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGCCAATCCCGACAATCTaGTTTTCTGAATTCACGATG +
Preference number: 3 (lower is better)
Translates to: KMKGISNLLEDDNPNLLEPIPTI*FSEFTM
Trigger: CATCGTGAATTCAGAAAACAAGATTGTCGGGATTGG...CTCCAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CCA 90 bp AAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTTGGGTCCGCACGGCTaGCCCCCGCCCACCATCCGG +
Preference number: 4 (lower is better)
Translates to: KSHQHPSQPGHKKGRHSRLGPHG*PPPTIR
Trigger: CCGGATGGTGGGCGGGGGCCAGCCGTGCGGACCCAA...ACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357067.7
ENST00000500813.6
CDS-3UTR CCA 90 bp AAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGGCTCCCCTCGGATTCCGGGAGGGTaGCTGGGGGTTTCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: KGRHSRSSPVHQATTGSPRIPGG*LGVSLN
Trigger: GTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCG...AGGGGAGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp CTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCGGATTCCGGGAGGGTaGCTGGGGGTTTCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: LLVCQDRCATLSRIPGGWRIPGG*LGVSLN
Trigger: GTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCG...CCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp CTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTCGTTCTAGCCCTGTaGACCAGGCCACCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LLVCQDRCATLSRIPGGWLVLAL*TRPPQA
Trigger: AGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAG...CCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCGCAGTGAAGAGAGGCTaGCGGATCGCAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: DRCATLSRIPGGWLGVSLAVKRG*RIAADD
Trigger: GTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGC...GAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp ACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCATTCCGGGAGGGTGGCTaGGGGTTTCCCTCAACTCTG +
Preference number: 4 (lower is better)
Translates to: TLSRIPGGWLGVSLNSAAFREGG*GFPSTL
Trigger: CAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAA...TGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCGCAGGGCATGGGCTTTaGGGGCAACAAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: DRCATLSRIPGGWLGVSLAGHGL*GQQGET
Trigger: TGTCTCTCCTTGTTGCCCCCAAAGCCCATGCCCTGC...GAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp CCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGGCAGGGCATGGGCTTTaGGGGCAACAAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: PPYLGFREGGWGFPSTLQAGHGL*GQQGET
Trigger: TGTCTCTCCTTGTTGCCCCCAAAGCCCATGCCCTGC...CTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp CTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCCGGATCGCAGCAGATaGCAGACAGCTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLVCQDRCATLSRIPGGWPDRSR*QTADAP
Trigger: AGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGG...CCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp CATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCCGGATCGCAGCAGATaGCAGACAGCTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: HPSQPGHKKGRHSRSSPVPDRSR*QTADAP
Trigger: AGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGG...CACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR TCA 90 bp CTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGGAGGGGCCTTGTACATaGACTGCGTTGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: LLVCQDRCATLSRIPGGWEGPCT*TALACG
Trigger: TCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTC...CCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp AGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGGAGGGGCCTTGTACATaGACTGCGTTGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: SIPASQDTRRGGTLVLALEGPCT*TALACG
Trigger: TCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTC...CAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp CCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGGCCTTGTACATGAACTaGGTTGGCATGCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPYLGFREGGWGFPSTLQALYMN*VGMRRR
Trigger: CCTCCTCCGCATGCCAACGCAGTTCATGTACAAGGC...CTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTGTTGGGTCATCCGGTaGCGGCTCCGCGCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: WFSYTPRLSGQMCHPISDCWVIR*RLRAQA
Trigger: GGCCTGCGCGCGGAGCCGGCACCGGATGACCCAACA...ATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438320.7
CDS-3UTR CCA 90 bp GCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCAGGGCATGGGCTTTaGGGGCAACAAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: ATSIPASQDTRRGGTLVLAGHGL*GQQGET
Trigger: TGTCTCTCCTTGTTGCCCCCAAAGCCCATGCCCTGC...TAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACACCACGGCAGGGCATaGGCTTTGGGGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: ARAQKSSEHQQCCSKLSPHHGRA*ALGATR
Trigger: CCTTGTTGCCCCCAAAGCCCATGCCCTGCCGTGGTG...TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp TCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCGAGGGGCCTTGTACATaGACTGCGTTGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: SDSGRVAGGFPQLCSKHFEGPCT*TALACG
Trigger: TCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTC...GAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp TCAGGCTCCACACTTTATTTAGGCATCTGCTACAGTGCAGGGCGGCAGTGCCTGCCCACTAGAGCCCTGTaGGGACTGAGGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SGSTLYLGICYSAGRQCLPTRAL*GLRPSI
Trigger: GATGCTGGGCCTCAGTCCTCACAGGGCTCTAGTGGG...CAGGCACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509218.5
ENST00000509757.5
CDS-3UTR TCA 90 bp CAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATGAGCCCTGTGAGGACTaGGGCCCAGCCGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: QSRQSCFLNSRCRRRPGNEPCED*GPAARL
Trigger: CAGCCGTGCGGCTGGGCCTCAGTCCTCACAGGGCTC...ATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513348.5
CDS-3UTR GCA 90 bp AGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGGCCTTGTACATGAACTaGGTTGGCATGCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SIPASQDTRRGGTLVLALALYMN*VGMRRR
Trigger: CCTCCTCCGCATGCCAACGCAGTTCATGTACAAGGC...CAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGGCTCCCCTGAACACCAACAGTGCTaGAGTAAGCTGTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: KGRHSRSSPVHQATTGSPEHQQC*SKLSPR
Trigger: ACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTC...AGGGGAGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp TTTCTCTCCAGTTGCAGAGGGGCCTTGTACATGAACTGCGTTGGCATGCGGAGGCACCACGGCAGGGCATaGGCTTTGGGGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: FLSSCRGALYMNCVGMRRHHGRA*ALGATR
Trigger: CCTTGTTGCCCCCAAAGCCCATGCCCTGCCGTGGTG...CCTCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGACTCGTTCTAGCCCTGTaGACCAGGCCACCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RRAPNTNSAAVSCLHVGGLVLAL*TRPPQA
Trigger: AGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAG...TCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGCTCGTTCTAGCCCTGTaGACCAGGCCACCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LHSSSVRTDVPPYLGFRELVLAL*TRPPQA
Trigger: AGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAG...CTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGCTGTCAGGACAGATGTaGCACCCTATCTCGGATTCC +
Preference number: 4 (lower is better)
Translates to: SIPASQDTRRGGTLVLALLSGQM*HPISDS
Trigger: GGAATCCGAGATAGGGTGGCACATCTGTCCTGACAG...CAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TGCTTCAGGCTCCACACTTTATTTAGGCATCTGCTACAGTGCAGGGCGGCAGTGAGGCATCTGCTACAGTaGAGGGCGGCAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CFRLHTLFRHLLQCRAAVRHLLQ*RAAVPG
Trigger: GCCAGGCACTGCCGCCCTGCACTGTAGCAGATGCCT...CACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCATGCAGGCGCCGACCTaGGAATTTGGATCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: DRCATLSRIPGGWLGVSLMQAPT*EFGSLL
Trigger: AAGCAAAGATCCAAATTCCCAGGTCGGCGCCTGCAT...GAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp TGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTAGGGAGGGGGAGCCATaGGGGGCGAGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: CTQSRQSCFLNSRCRRRPREGEP*GAREEQ
Trigger: CTGCTCTTCCCTCGCCCCCCATGGCTCCCCCTCCCT...AGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR TCA 90 bp CTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAGATGACAGACAGCTaGTGCTCCTCTGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LGFREGGWGFPSTLQQTLQMTDS*CSSEEP
Trigger: TGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTG...AAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp TCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCGAGCCCTGTGAGGACTaGGGCCCAGCATCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: SHCTQSRQSCFLNSRCRREPCED*GPASGA
Trigger: GGCACCGGATGCTGGGCCTCAGTCCTCACAGGGCTC...GCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
CDS-3UTR GCA 90 bp AAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTTTCTGAATTCACGATaGAGGCGCCGACCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: KSHQHPSQPGHKKGRHSRFLNSR*RRRPGN
Trigger: ATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAA...ACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR GCA 90 bp GGCGAGGGAAGAGCAGGAGAGGGAAGGGTCCTGTTAATCCCCTGGGCGCCTTCTGTCCAGCTTATTCTCTaGTGTCCTTCTCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: GEGRAGEGRVLLIPWAPSVQLIL*CPSPRQ
Trigger: TTGCCTTGGAGAAGGACAGCAGAGAATAAGCTGGAC...AGAAGGCGCCCAGGGGATTAACAGGACCCTTCCCTCTCCTGCTCTTCCCTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513348.5
CDS-3UTR GCA 90 bp TTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGCAGTGAAGAGAGGCTaGCGGATCGCAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: LHSSSVRTDVPPYLGFREAVKRG*RIAADD
Trigger: GTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGC...CTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGGGCACTATATGCCATaGTTCACTTGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: ATSIPASQDTRRGGTLVLGHYMP*FTWARC
Trigger: ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC...TAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTATCCAAGGGCACTATATaGCATGCTTCACTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ATSIPASQDTRRGGTLVLSKGTI*HASLGP
Trigger: TGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGA...TAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGTCCAAGGGCACTATATaGCATGCTTCACTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: DTRRGGTLVLALCTRPPQSKGTI*HASLGP
Trigger: TGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGA...CTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TTTCTCTCCAGTTGCAGAGGGGCCTTGTACATGAACTGCGTTGGCATGCGGAGGTGCCACCACCCTGTGTaGAGTGGGAGAGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: FLSSCRGALYMNCVGMRRCHHPV*SGRAGM
Trigger: CATTCCTGCTCTCCCACTGCACACAGGGTGGTGGCA...CCTCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAATCCCCGCCGCCGCCGTaGTCAGGGAAGGAAGTCGGG +
Preference number: 4 (lower is better)
Translates to: RSLAAVASSLSWYLSDMKSPPPP*SGKEVG
Trigger: CCCGACTTCCTTCCCTGAGCACGGCGGCGGCGGGGA...TTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507631.5
CDS-3UTR CCA 90 bp CGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGCACACTGGGAATTTaGATCTTTGCTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RLSGQMCHPISDSGRVAGGTLGI*IFASLC
Trigger: GCACAGAGAAGCAAAGATCCAAATTCCCAGTGTGCC...CCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000500813.6
CDS-3UTR CCA 90 bp GACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGGCATTCAGCTCCGCATaGCACACTGGGAATTTGGAT +
Preference number: 4 (lower is better)
Translates to: DTRRGGTLVLALCTRPPQAFSSA*HTGNLD
Trigger: ATCCAAATTCCCAGTGTGCCATGCGGAGCTGAATGC...CTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507631.5
CDS-3UTR TCA 90 bp GAAGGCCACAGCCATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGAGCCCTGTGAGGACTaGGGCCCAGCATCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: EGHSHKILWPFQIVVPFLEPCED*GPASGA
Trigger: GGCACCGGATGCTGGGCCTCAGTCCTCACAGGGCTC...AAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATGGCTGTGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
CDS-3UTR TCA 90 bp AGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCCCACTAGAGCCCTGTaGGGACTGAGGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: RALYAMLHLGQMFRSVCLPTRAL*GLRPSI
Trigger: GATGCTGGGCCTCAGTCCTCACAGGGCTCTAGTGGG...CAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR TCA 90 bp GCATCTCCCAAAACTTCTGCTTCAGGCTCCACACTTTATTTAGGCATCTGCTACCCCACTAGAGCCCTGTaGGGACTGAGGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ASPKTSASGSTLYLGICYPTRAL*GLRPSR
Trigger: GCGGCTGGGCCTCAGTCCTCACAGGGCTCTAGTGGG...GTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513348.5
CDS-3UTR GCA 90 bp TCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCGCAACACGTCATCACTaGACCCATTTGGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: SDSGRVAGGFPQLCSKHFATRHH*THLASH
Trigger: ATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGC...GAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR GCA 90 bp ATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTCCCCATGCCACCACCCTGTGTaGAGTGGGAGAGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: MPCFTWARCSDQCVCSSPCHHPV*SGRAGM
Trigger: CATTCCTGCTCTCCCACTGCACACAGGGTGGTGGCA...TGGGGACGAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCTCCGAACACCAACAGTaGTGCAGTAAGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SDSGRVAGGFPQLCSKHFSEHQQ*CSKLSP
Trigger: TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGA...GAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp CTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGATGCCATGCTTCACTTaGGCCAGATGTTCAGATCAG +
Preference number: 4 (lower is better)
Translates to: LLVCQDRCATLSRIPGGWMPCFT*ARCSDQ
Trigger: CTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT...CCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp CGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGTCGAATTTTTGTTCATaGTGGCATTCAGCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: RLSGQMCHPISDSGRVAGSNFCS*WHSAPH
Trigger: ATGCGGAGCTGAATGCCATCATGAACAAAAATTCGA...CCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp AAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGGCTCCCCTCAATCTTCTGGAGATTaGATGAGATGTAACTCACTG +
Preference number: 4 (lower is better)
Translates to: KGRHSRSSPVHQATTGSPQSSGD*MRCNSL
Trigger: CAGTGAGTTACATCTCATTCAATCTCCAGAAGATTG...AGGGGAGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR TCA 90 bp CACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCGAGCCCTGTGAGGACTaGGGCCCAGCATCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: HPFGIPLYPIPTILFSEFEPCED*GPASGA
Trigger: GGCACCGGATGCTGGGCCTCAGTCCTCACAGGGCTC...GAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
CDS-3UTR TCA 90 bp TCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGATCTTTGCCCCACTAGAGCCCTGTaGGGACTGAGGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SCFLNSRCRRRPGNLDLCPTRAL*GLRPSI
Trigger: GATGCTGGGCCTCAGTCCTCACAGGGCTCTAGTGGG...GCAAAGATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
CDS-3UTR GCA 90 bp TCCTCTGAAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCAAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: SSEEPPASQPARTQEGEASRPVS*RKLHSC
Trigger: ACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACT...TGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTTCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp GACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: DTRRGGTLVLALCTRPPQSRPVS*RKLHSC
Trigger: ACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACT...CTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp CGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGCACTTCTTTTATACCTaGCTGGATGATGAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: RLSGQMCHPISDSGRVAGHFFYT*LDDELS
Trigger: GCTAAGCTCATCATCCAGGCAGGTATAAAAGAAGTG...CCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATGCAGTGAAGAGAGGCTaGCGGATCGCAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: WFSYTPRLSGQMCHPISDAVKRG*RIAADD
Trigger: GTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGC...ATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TCCTCTGAAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCATCAGATCAGTGTGTCTaGTCGTCCCCATTAAGAACA +
Preference number: 4 (lower is better)
Translates to: SSEEPPASQPARTQEGEASDQCV*SSPLRT
Trigger: TGTTCTTAATGGGGACGAGCAGACACACTGATCTGA...TGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTTCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCAGGGCACTATATGCCATaGTTCACTTGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: ARAQKSSEHQQCCSKLSPGHYMP*FTWARC
Trigger: ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC...TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp ATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTCCCCAGCCTTGTACATGAACTaGGTTGGCATGCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: MPCFTWARCSDQCVCSSPALYMN*VGMRRR
Trigger: CCTCCTCCGCATGCCAACGCAGTTCATGTACAAGGC...TGGGGACGAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp ATGAGCTTAGCGCATTCATTACAAGGGAACAAGGCAACATACATACTACAGCCTTGTTGGGTCATCCGGTaGCGGCTCCGCGCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: MSLAHSLQGNKATYILQPCWVIR*RLRAQA
Trigger: GGCCTGCGCGCGGAGCCGGCACCGGATGACCCAACA...AGGCTGTAGTATGTATGTTGCCTTGTTCCCTTGTAATGAATGCGCTAAGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507631.5
CDS-3UTR GCA 90 bp GGAAGGCAAGCATCTCCCAAAACTTCTGCTTCAGGCTCCACACTTTATTTAGGCAGGCATCTGCTACAGTaGAGGGCGGCAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRQASPKTSASGSTLYLGRHLLQ*RAAVPG
Trigger: GCCAGGCACTGCCGCCCTGCACTGTAGCAGATGCCT...GCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGATGCTTGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAAATCACTTCTTTGGGTCCGCACGGCTaGCCCCCGCCCACCATCCGG +
Preference number: 4 (lower is better)
Translates to: AAVASSLSWYLSDMKITSLGPHG*PPPTIR
Trigger: CCGGATGGTGGGCGGGGGCCAGCCGTGCGGACCCAA...AGAAGTGATTTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000500813.6
CDS-3UTR CCA 90 bp ATGGAGCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTGCATTCAGCTCCGCATaGCACACGTACGGGTATTTG +
Preference number: 4 (lower is better)
Translates to: MEPGHRRAPNTNSAAVSCAFSSA*HTYGYL
Trigger: CAAATACCCGTACGTGTGCCATGCGGAGCTGAATGC...ACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp CTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTATGCCATGCTTCACTTaGGCCAGATGTTCAGATCAG +
Preference number: 4 (lower is better)
Translates to: LGFREGGWGFPSTLQQTLMPCFT*ARCSDQ
Trigger: CTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT...AAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp AAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTCGGATTCCGGGAGGGTaGCTGGGGGTTTCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: KYSWFSYTPRLSGQMCHPRIPGG*LGVSLN
Trigger: GTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCG...AGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GTGCACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAACGGATTCCGGGAGGGTaGCTGGGGGTTTCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: VHQATTGSPILNPKAIVQRIPGG*LGVSLN
Trigger: GTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCG...TTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp CTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCTGTCTCCACGTGGGTaGAATTTCTCACAATCCACT +
Preference number: 4 (lower is better)
Translates to: LGFREGGWGFPSTLQQTLLSPRG*NFSQST
Trigger: AGTGGATTGTGAGAAATTCCACCCACGTGGAGACAG...AAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp CCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCAGATGACAGACAGGACAATCTTGTTTTCTaGATTCACGATGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PAHVAVKRGCRIAADDRQDNLVF*IHDAGA
Trigger: GGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTC...CTGTCTGTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR TCA 90 bp AAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCGAATTTTTGTTCATaGTGGCATTCAGCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: KSHQHPSQPGHKKGRHSRSNFCS*WHSAPH
Trigger: ATGCGGAGCTGAATGCCATCATGAACAAAAATTCGA...ACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR TCA 90 bp GATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAATTGCTGCACTTCGGTATaGATTTCCGGAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: DSGRVAGGFPQLCSKHFNCCTSV*ISGMSP
Trigger: GGGTGACATTCCGGAAATTCATACCGAAGTGCAGCA...ATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp GCACTTCGGTATGAATTTCCGGAATGTCACCCCGGCCATATTAAACAGGAGCCTGAGGGGCCTTGTACATaGACTGCGTTGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: ALRYEFPECHPGHIKQEPEGPCT*TALACG
Trigger: TCCGCATGCCAACGCAGTTCATGTACAAGGCCCCTC...AGGCTCCTGTTTAATATGGCCGGGGTGACATTCCGGAAATTCATACCGAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp TTCACATCGGTCGAATTTTTGTTCATGATGGCATTCAGCTCCGCATGGCACACGTTCTCCTGGTGTGGCTaGACGCCCACTAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: FTSVEFLFMMAFSSAWHTFSWCG*TPTRAL
Trigger: CAGGGCTCTAGTGGGCGTTCAGCCACACCAGGAGAA...CGTGTGCCATGCGGAGCTGAATGCCATCATGAACAAAAATTCGACCGATGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR TCA 90 bp GGAAGGCAAGCATCTCCCAAAACTTCTGCTTCAGGCTCCACACTTTATTTAGGCTTCTCCTGGTGTGGCTaGACGCCCACTAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GRQASPKTSASGSTLYLGFSWCG*TPTRAL
Trigger: CAGGGCTCTAGTGGGCGTTCAGCCACACCAGGAGAA...GCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGATGCTTGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR GCA 90 bp CGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGGAATTTGGATCTTTaGTTCTCTGTGCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: RLSGQMCHPISDSGRVAGGNLDL*FSVLIR
Trigger: TCTTATCAGCACAGAGAAGCAAAGATCCAAATTCCC...CCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCGGGAATTTGGATCTTTaGTTCTCTGTGCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: DRCATLSRIPGGWLGVSLGNLDL*FSVLIR
Trigger: TCTTATCAGCACAGAGAAGCAAAGATCCAAATTCCC...GAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAATTTTCTGAATTCACGATaGAGGCGCCGACCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: DSGRVAGGFPQLCSKHFNFLNSR*RRRPGN
Trigger: ATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAA...ATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR GCA 90 bp ATGGAGCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTGCAACACGTCATCACTaGACCCATTTGGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: MEPGHRRAPNTNSAAVSCATRHH*THLASH
Trigger: ATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGC...ACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR GCA 90 bp CTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTGGTTTCCCTCAACTCTaGAGCAAACACTTCAATGCT +
Preference number: 4 (lower is better)
Translates to: LGFREGGWGFPSTLQQTLGFPQL*SKHFNA
Trigger: AGCATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACC...AAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp ATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTCCCCACTGTCAGGACAGATGTaGCACCCTATCTCGGATTCC +
Preference number: 4 (lower is better)
Translates to: MPCFTWARCSDQCVCSSPLSGQM*HPISDS
Trigger: GGAATCCGAGATAGGGTGGCACATCTGTCCTGACAG...TGGGGACGAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAATTTTCTCTCCAGTTaGAGAGGGGCCTTGTACATG +
Preference number: 4 (lower is better)
Translates to: SDSGRVAGGFPQLCSKHFNFLSS*RGALYM
Trigger: CATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATT...GAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGTCCGAACACCAACAGTaGTGCAGTAAGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHSSSVRTDVPPYLGFRESEHQQ*CSKLSP
Trigger: TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGA...CTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGTCCCCGCCGCCGCCGTaGTCAGGGAAGGAAGTCGGG +
Preference number: 4 (lower is better)
Translates to: KMKGISNLLEDDNPNLLESPPPP*SGKEVG
Trigger: CCCGACTTCCTTCCCTGAGCACGGCGGCGGCGGGGA...CTCCAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438320.7
ENST00000507631.5
CDS-3UTR CCA 90 bp TCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTTTCCGGGAGGGTGGCTaGGGGTTTCCCTCAACTCTG +
Preference number: 4 (lower is better)
Translates to: SSKGTICHASLGPDVQISFREGG*GFPSTL
Trigger: CAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAA...ACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp CCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCAGATGACAGACAGGTGGGAGAGCAGGAATaGAGGAAATATTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PAHVAVKRGCRIAADDRQVGEQE*RKYSWF
Trigger: GAACCAGGAATATTTCCTCCATTCCTGCTCTCCCAC...CTGTCTGTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp ATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCACCACGGCAGGGCATaGGCTTTGGGGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: MEEIFLVQLHSSSVRTDVHHGRA*ALGATR
Trigger: CCTTGTTGCCCCCAAAGCCCATGCCCTGCCGTGGTG...CACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp CATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGAAGGGAGGGGGAGCCATaGGGGGCGAGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HLASHCTQSRQSCFLNSRREGEP*GAREEQ
Trigger: CTGCTCTTCCCTCGCCCCCCATGGCTCCCCCTCCCT...TCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp CATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCAGGGAGGGGGAGCCATaGGGGGCGAGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HKILWPFQIVVPFLAGNFREGEP*GAREEQ
Trigger: CTGCTCTTCCCTCGCCCCCCATGGCTCCCCCTCCCT...GAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp ACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCAAGGGAGGGGGAGCCATaGGGGGCGAGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: THLASHCTQSRQSCFLNSREGEP*GAREEQ
Trigger: CTGCTCTTCCCTCGCCCCCCATGGCTCCCCCTCCCT...TGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR TCA 90 bp CCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCGGTCTGCTGTTAATTaGATCAAAGTCAATGACAAT +
Preference number: 4 (lower is better)
Translates to: PPYLGFREGGWGFPSTLQRSAVN*IKVNDN
Trigger: ATTGTCATTGACTTTGATTCAATTAACAGCAGACCG...CTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp CATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGTGTGTAACTTCAAGATaGAAGGCATTAGCAACCTCT +
Preference number: 4 (lower is better)
Translates to: HPSQPGHKKGRHSRSSPVCVTSR*KALATS
Trigger: AGAGGTTGCTAATGCCTTTCATCTTGAAGTTACACA...CACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR TCA 90 bp GGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCCAGATGACAGACAGCTaGTGCTCCTCTGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GHYMPCFTWARCSDQCVCQMTDS*CSSEEP
Trigger: TGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTG...GCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp ATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGATCTTTGTTCTCCTGGTGTGGCTaGACGCCCACTAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ILFSEFTMQAPTWEFGSLFSWCG*TPTRAL
Trigger: CAGGGCTCTAGTGGGCGTTCAGCCACACCAGGAGAA...CAAAGATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR GCA 90 bp AGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCAGGGAATTTGGATCTTTaGTTCTCTGTGCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: SQDTRRGGTLVLALCTRPGNLDL*FSVLIR
Trigger: TCTTATCAGCACAGAGAAGCAAAGATCCAAATTCCC...TGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp TCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCCAGCAAACACTTCAATaGTACTGTCATTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SDSGRVAGGFPQLCSKHFQQTLQ*YCHLRP
Trigger: AGGCCTCAAATGACAGTAGCATTGAAGTGTTTGCTG...GAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp CGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGATTGCCACCACCCTGTGTaGAGTGGGAGAGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: RQSCFLNSRCRRRPGNLDCHHPV*SGRAGM
Trigger: CATTCCTGCTCTCCCACTGCACACAGGGTGGTGGCA...ATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR GCA 90 bp GGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCCCCAGAGGGATAATGTaGCACCACCCTGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GGNIPGSVTLLVCQDRCAPRGIM*HHPVCS
Trigger: ACTGCACACAGGGTGGTGGCACATTATCCCTCTGGG...GGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCCCCAGAGGGATAATGTaGCACCACCCTGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ALYAMLHLGQMFRSVCLLPRGIM*HHPVCS
Trigger: ACTGCACACAGGGTGGTGGCACATTATCCCTCTGGG...GAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp CACAGCCATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGATTCCGGGAGGGTGGCTaGGGGTTTCCCTCAACTCTG +
Preference number: 4 (lower is better)
Translates to: HSHKILWPFQIVVPFLAGFREGG*GFPSTL
Trigger: CAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAA...TCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CCA 90 bp GGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCGCAACACATCCATGTTaGGGACCCCTCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: GGNIPGSVTLLVCQDRCAATHPC*GPLPST
Trigger: TGTGGATGGGAGGGGTCCCCAACATGGATGTGTTGC...GGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp CAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTCATGTTGGGTCACGGAGAGTCCTGTTAATCCCCTaGGCGCCTTCTCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: QIVVPFLAGNFTHVGSRRVLLIP*APSPGV
Trigger: CACACCAGGAGAAGGCGCCCAGGGGATTAACAGGAC...TCTCCGTGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GCAACACGTCATCACTGCACCCATTTGGCATCCCATTGTACCCAATCCCGACAACATCCATCATCGCTGTaGGGTGCTGGAGAAGTACCT +
Preference number: 4 (lower is better)
Translates to: ATRHHCTHLASHCTQSRQHPSSL*GAGEVP
Trigger: AGGTACTTCTCCAGCACCCCACAGCGATGATGGATG...TTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513348.5
CDS-3UTR TCA 90 bp GCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCCAGATGACAGACAGCTaGTGCTCCTCTGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ALYAMLHLGQMFRSVCLLQMTDS*CSSEEP
Trigger: TGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTG...GAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp GGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCCAGATGACAGACAGCTaGTGCTCCTCTGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GRAGMEEIFLVQLHSSSVQMTDS*CSSEEP
Trigger: TGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTG...GACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp CACTTCGGTATGAATTTCCGGAATGTCACCCCGGCCATATTAAACAGGAGCCTCCAGATGACAGACAGCTaGTGCTCCTCTGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: HFGMNFRNVTPAILNRSLQMTDS*CSSEEP
Trigger: TGGCTCTTCAGAGGAGCATCAGCTGTCTGTCATCTG...GAGGCTCCTGTTTAATATGGCCGGGGTGACATTCCGGAAATTCATACCGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR TCA 90 bp GGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGCCGGATCGCAGCAGATaGCAGACAGCTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: GIPLYPIPTILFSEFTMQPDRSR*QTADAP
Trigger: AGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGG...CTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR TCA 90 bp ATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTCATTTCTCCTGGTGTGGCTaGACGCCCACTAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ILWPFQIVVPFLAGNFTHFSWCG*TPTRAL
Trigger: CAGGGCTCTAGTGGGCGTTCAGCCACACCAGGAGAA...ATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR GCA 90 bp GCAACACGTCATCACTGCACCCATTTGGCATCCCATTGTACCCAATCCCGACAAGCAACACGTCATCACTaGACCCATTTGGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: ATRHHCTHLASHCTQSRQATRHH*THLASH
Trigger: ATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGC...TTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
CDS-3UTR GCA 90 bp CGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCCTCGTTCTAGCCCTGTaGACCAGGCCACCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RGWNFSQSTHGIGINFLSLVLAL*TRPPQA
Trigger: AGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAG...GGAGAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp ATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGATCTTTGGCAGTGAAGAGAGGCTaGCGGATCGCAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: ILFSEFTMQAPTWEFGSLAVKRG*RIAADD
Trigger: GTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGC...CAAAGATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR GCA 90 bp CACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAAACAGCAGTGAAGAGAGGCTaGCGGATCGCAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: HQATTGSPILNPKAIVQTAVKRG*RIAADD
Trigger: GTCATCTGCTGCGATCCGGCAGCCTCTCTTCACTGC...TGTTTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp TGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTCTGTCAGGACAGATGTaGCACCCTATCTCGGATTCC +
Preference number: 4 (lower is better)
Translates to: CTQSRQSCFLNSRCRRRPLSGQM*HPISDS
Trigger: GGAATCCGAGATAGGGTGGCACATCTGTCCTGACAG...AGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR GCA 90 bp CATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCAGGCATCTGCTACAGTaGAGGGCGGCAGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: HKILWPFQIVVPFLAGNFRHLLQ*RAAVPG
Trigger: GCCAGGCACTGCCGCCCTGCACTGTAGCAGATGCCT...GAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp CTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTAGCCATAAAATACTCTaGCCATTCCAAATAGTCGTC +
Preference number: 4 (lower is better)
Translates to: LGFREGGWGFPSTLQQTLSHKIL*PFQIVV
Trigger: GACGACTATTTGGAATGGCCAGAGTATTTTATGGCT...AAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp TTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGATCACTGCACCCATTTaGCATCCCATTGTACCCAAT +
Preference number: 4 (lower is better)
Translates to: LHSSSVRTDVPPYLGFREITAPI*HPIVPN
Trigger: ATTGGGTACAATGGGATGCCAAATGGGTGCAGTGAT...CTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp GCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGCATTCAGCTCCGCATaGCACACGTACGGGTATTTG +
Preference number: 4 (lower is better)
Translates to: ALYAMLHLGQMFRSVCLLAFSSA*HTYGYL
Trigger: CAAATACCCGTACGTGTGCCATGCGGAGCTGAATGC...GAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp AGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGCAACACATCCATGTTaGGGACCCCTCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: SGRAGMEEIFLVQLHSSSATHPC*GPLPST
Trigger: TGTGGATGGGAGGGGTCCCCAACATGGATGTGTTGC...AGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
3UTR CAA 72 bp TTCACGATGCAGGCGCCGACCTGGGAATTTGGATCTTaGCTTCTCTGTGCTGATAAGAAGGCCACAGCCATA +
Preference number: 4 (lower is better)
Translates to: FTMQAPTWEFGS*LLCADKKATAI
Trigger: TATGGCTGTGGCCTTCTTATCAGCACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
3UTR CAA 72 bp CCATTTGGCATCCCATTGTACCCAATCCCGACAATCTaGTTTTCTGAATTCACGATGCAGGCGCCGACCTGG +
Preference number: 4 (lower is better)
Translates to: PFGIPLYPIPTI*FSEFTMQAPTW
Trigger: CCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR TCA 90 bp GGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCGACAATCTTGTTTTCTaGATTCACGATGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GHYMPCFTWARCSDQCVCDNLVF*IHDAGA
Trigger: GGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTC...GCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR TCA 90 bp GATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAATTCGAATTTTTGTTCATaGTGGCATTCAGCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: DSGRVAGGFPQLCSKHFNSNFCS*WHSAPH
Trigger: ATGCGGAGCTGAATGCCATCATGAACAAAAATTCGA...ATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp GCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCTGCTGCACTTCGGTATaGATTTCCGGAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: ALYAMLHLGQMFRSVCLLCCTSV*ISGMSP
Trigger: GGGTGACATTCCGGAAATTCATACCGAAGTGCAGCA...GAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp GAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAAATCCGGATCGCAGCAGATaGCAGACAGCTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: EPRSSCLVTIMVFIRHENPDRSR*QTADAP
Trigger: AGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGG...ATTTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp TGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTTTCTGAATTCACGATaGAGGCGCCGACCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: CSGRAGMEEIFLVQLHSSFLNSR*RRRPGN
Trigger: ATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAA...CGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR GCA 90 bp GCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTGCAACACGTCATCACTaGACCCATTTGGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: AVGEQEWRKYSWFSYTPRATRHH*THLASH
Trigger: ATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGC...ACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR GCA 90 bp GATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTCAATCACTTCTTTTATACCTaGCTGGATGATGAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: DSGRVAGGFPQLCSKHFNHFFYT*LDDELS
Trigger: GCTAAGCTCATCATCCAGGCAGGTATAAAAGAAGTG...ATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GGCCTAATTTTCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTGAGCCTCGCAGCAGTTaGCTCGTCACTATCATGGTA +
Preference number: 4 (lower is better)
Translates to: GLIFFQGHYMPCFTWARCEPRSS*LVTIMV
Trigger: TACCATGATAGTGACGAGGCAACTGCTGCGAGGCTC...ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGAAAATTAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGAGCCTCGCAGCAGTTaGCTCGTCACTATCATGGTA +
Preference number: 4 (lower is better)
Translates to: SGRAGMEEIFLVQLHSSSEPRSS*LVTIMV
Trigger: TACCATGATAGTGACGAGGCAACTGCTGCGAGGCTC...AGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp CAAGGGAACAAGGCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGCTCGTTCTAGCCCTGTaGACCAGGCCACCACAGGCT +
Preference number: 4 (lower is better)
Translates to: QGNKATYILQPFTSVEFLLVLAL*TRPPQA
Trigger: AGCCTGTGGTGGCCTGGTGCACAGGGCTAGAACGAG...CAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGCCTTGTTCCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp AGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGGGGCACTATATGCCATaGTTCACTTGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: RALYAMLHLGQMFRSVCLGHYMP*FTWARC
Trigger: ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC...CAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGGCATCCCATTGTATCCAAGGGCACTATATaGCATGCTTCACTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CPSPRQHVITAPIWHPIVSKGTI*HASLGP
Trigger: TGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGA...TACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR GCA 90 bp CGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCTGCCACCACCCTGTGTaGAGTGGGAGAGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: RGWNFSQSTHGIGINFLSCHHPV*SGRAGM
Trigger: CATTCCTGCTCTCCCACTGCACACAGGGTGGTGGCA...GGAGAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAACCCAGAGGGATAATGTaGCACCACCCTGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSLAAVASSLSWYLSDMKPRGIM*HHPVCS
Trigger: ACTGCACACAGGGTGGTGGCACATTATCCCTCTGGG...TTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GGGATAGGAATTAATTTTCTCTCCAGTTGCAGAGGGGCCTTGTACATGAACTGCGCCTTGTACATGAACTaGGTTGGCATGCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GIGINFLSSCRGALYMNCALYMN*VGMRRR
Trigger: CCTCCTCCGCATGCCAACGCAGTTCATGTACAAGGC...GCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACTCTCCGAACACCAACAGTaGTGCAGTAAGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSAAVSCLHVGGISHNPLSEHQQ*CSKLSP
Trigger: TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGA...GAGTGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCAAGCCATAAAATACTCTaGCCATTCCAAATAGTCGTC +
Preference number: 4 (lower is better)
Translates to: ARAQKSSEHQQCCSKLSPSHKIL*PFQIVV
Trigger: GACGACTATTTGGAATGGCCAGAGTATTTTATGGCT...TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCGCCGACCTGGGAATTTaGATCTTTGCTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GGNIPGSVTLLVCQDRCAADLGI*IFASLC
Trigger: GCACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGC...GGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp GCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGCCGACCTGGGAATTTaGATCTTTGCTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: ALYAMLHLGQMFRSVCLLADLGI*IFASLC
Trigger: GCACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGC...GAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp AATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTAGCATTCAGCTCCGCATaGCACACGTACGGGTATTTG +
Preference number: 4 (lower is better)
Translates to: NIPGSVTLLVCQDRCATLAFSSA*HTYGYL
Trigger: CAAATACCCGTACGTGTGCCATGCGGAGCTGAATGC...TAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp AAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGCACCACGGCAGGGCATaGGCTTTGGGGGCAACAAGG +
Preference number: 4 (lower is better)
Translates to: KMKGISNLLEDDNPNLLEHHGRA*ALGATR
Trigger: CCTTGTTGCCCCCAAAGCCCATGCCCTGCCGTGGTG...CTCCAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp AGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCAGAATACCCTAGAATGTaGAATACAAAATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SQDTRRGGTLVLALCTRPEYPRM*NTKSQR
Trigger: TCTCTGAGATTTTGTATTCCACATTCTAGGGTATTC...TGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
CDS-3UTR CCA 90 bp CACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCGTCCTGTTAATCCCCTaGGCGCCTTCTCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: HPFGIPLYPIPTILFSEFVLLIP*APSPGV
Trigger: CACACCAGGAGAAGGCGCCCAGGGGATTAACAGGAC...GAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp TGCACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATGTCCTGTTAATCCCCTaGGCGCCTTCTCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CTHLASHCTQSRQSCFLNVLLIP*APSPGV
Trigger: CACACCAGGAGAAGGCGCCCAGGGGATTAACAGGAC...ATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507543.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp AGGAAACTTCACTCATGTTGGGTCTGTCTCCCACGGAGAAATCTTGAGAAAGGCCATCCATCATCGCTGTaGGGTGCTGGAGAAGTACCT +
Preference number: 4 (lower is better)
Translates to: RKLHSCWVCLPRRNLEKGHPSSL*GAGEVP
Trigger: AGGTACTTCTCCAGCACCCCACAGCGATGATGGATG...GCCTTTCTCAAGATTTCTCCGTGGGAGACAGACCCAACATGAGTGAAGTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509218.5
3UTR CAA 72 bp TCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTaGGCATCCCATTGTACCCAATCCCGACAATCTTGT +
Preference number: 4 (lower is better)
Translates to: SFSKATRHHCTH*ASHCTQSRQSC
Trigger: ACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
CDS-3UTR TCA 90 bp GGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCGACAATCTTGTTTTCTaGATTCACGATGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GGNIPGSVTLLVCQDRCADNLVF*IHDAGA
Trigger: GGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTC...GGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR TCA 90 bp AGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTTGCTGCACTTCGGTATaGATTTCCGGAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: SGRAGMEEIFLVQLHSSSCCTSV*ISGMSP
Trigger: GGGTGACATTCCGGAAATTCATACCGAAGTGCAGCA...AGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp GTGCACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAATGCTGCACTTCGGTATaGATTTCCGGAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: VHQATTGSPILNPKAIVQCCTSV*ISGMSP
Trigger: GGGTGACATTCCGGAAATTCATACCGAAGTGCAGCA...TTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR TCA 90 bp TTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGCAATCTTCTGGAGATTaGATGAGATGTAACTCACTG +
Preference number: 4 (lower is better)
Translates to: LHSSSVRTDVPPYLGFREQSSGD*MRCNSL
Trigger: CAGTGAGTTACATCTCATTCAATCTCCAGAAGATTG...CTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAGGGAATTTGGATCTTTaGTTCTCTGTGCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: RRAPNTNSAAVSCLHVGGGNLDL*FSVLIR
Trigger: TCTTATCAGCACAGAGAAGCAAAGATCCAAATTCCC...TCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTGTCCAGCTTATTCTCTaGTGTCCTTCTCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: AVGEQEWRKYSWFSYTPRVQLIL*CPSPRQ
Trigger: TTGCCTTGGAGAAGGACAGCAGAGAATAAGCTGGAC...ACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR GCA 90 bp GCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTCCAGCTTATTCTCTaGTGTCCTTCTCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ALYAMLHLGQMFRSVCLLVQLIL*CPSPRQ
Trigger: TTGCCTTGGAGAAGGACAGCAGAGAATAAGCTGGAC...GAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR GCA 90 bp ATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGGAGCCTCGCAGCAGTTaGCTCGTCACTATCATGGTA +
Preference number: 4 (lower is better)
Translates to: MEEIFLVQLHSSSVRTDVEPRSS*LVTIMV
Trigger: TACCATGATAGTGACGAGGCAACTGCTGCGAGGCTC...CACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TTAAACAGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACGAGCCTCGCAGCAGTTaGCTCGTCACTATCATGGTA +
Preference number: 4 (lower is better)
Translates to: LNRSLAAVASSLSWYLSDEPRSS*LVTIMV
Trigger: TACCATGATAGTGACGAGGCAACTGCTGCGAGGCTC...GTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCTGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp TGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATGGTTTCCCTCAACTCTaGAGCAAACACTTCAATGCT +
Preference number: 4 (lower is better)
Translates to: WFSYTPRLSGQMCHPISDGFPQL*SKHFNA
Trigger: AGCATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACC...ATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGAACACCAACAGTGCTaGAGTAAGCTGTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: SGRAGMEEIFLVQLHSSSEHQQC*SKLSPR
Trigger: ACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTC...AGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp ATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGAACACCAACAGTGCTaGAGTAAGCTGTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: IPTILFSEFTMQAPTWEFEHQQC*SKLSPR
Trigger: ACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTC...AAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR GCA 90 bp TGCTTCAGGCTCCACACTTTATTTAGGCATCTGCTACAGTGCAGGGCGGCAGTGATCTCCCAAAACTTCTaGTTCAGGCTCCACACTTTA +
Preference number: 4 (lower is better)
Translates to: CFRLHTLFRHLLQCRAAVISQNF*FRLHTL
Trigger: TAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGAT...CACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GTGCACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAAGCCGACCTGGGAATTTaGATCTTTGCTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VHQATTGSPILNPKAIVQADLGI*IFASLC
Trigger: GCACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGC...TTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp CGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGATGCCGACCTGGGAATTTaGATCTTTGCTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RQSCFLNSRCRRRPGNLDADLGI*IFASLC
Trigger: GCACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGC...ATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp AGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTATGCAGGCGCCGACCTaGGAATTTGGATCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SGRAGMEEIFLVQLHSSSMQAPT*EFGSLL
Trigger: AAGCAAAGATCCAAATTCCCAGGTCGGCGCCTGCAT...AGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp CGTTTCTTGCAGGAAACTTCACTCATGTTGGGTCTGTCTCCCACGGAGAAATCTATGCAGGCGCCGACCTaGGAATTTGGATCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: RFLQETSLMLGLSPTEKSMQAPT*EFGSLL
Trigger: AAGCAAAGATCCAAATTCCCAGGTCGGCGCCTGCAT...AGATTTCTCCGTGGGAGACAGACCCAACATGAGTGAAGTTTCCTGCAAGAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509218.5
CDS-3UTR CCA 90 bp ATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTATGCAGGCGCCGACCTaGGAATTTGGATCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: IPTILFSEFTMQAPTWEFMQAPT*EFGSLL
Trigger: AAGCAAAGATCCAAATTCCCAGGTCGGCGCCTGCAT...AAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GCAACACGTCATCACTGCACCCATTTGGCATCCCATTGTACCCAATCCCGACAAATCACTGCACCCATTTaGCATCCCATTGTACCCAAT +
Preference number: 4 (lower is better)
Translates to: ATRHHCTHLASHCTQSRQITAPI*HPIVPN
Trigger: ATTGGGTACAATGGGATGCCAAATGGGTGCAGTGAT...TTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATGACGTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCAGCCTCGTCACTATCATaGTATTTATCAGACATGAAA +
Preference number: 4 (lower is better)
Translates to: ARAQKSSEHQQCCSKLSPASSLS*YLSDMK
Trigger: TTTCATGTCTGATAAATACCATGATAGTGACGAGGC...TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp AACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACTCATGCCATGCTTCACTTaGGCCAGATGTTCAGATCAG +
Preference number: 4 (lower is better)
Translates to: NSAAVSCLHVGGISHNPLMPCFT*ARCSDQ
Trigger: CTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT...GAGTGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp AACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACTCGTGGGAGAGCAGGAATaGAGGAAATATTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: NSAAVSCLHVGGISHNPLVGEQE*RKYSWF
Trigger: GAACCAGGAATATTTCCTCCATTCCTGCTCTCCCAC...GAGTGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTGGGAGAGCAGGAATaGAGGAAATATTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ALYAMLHLGQMFRSVCLLVGEQE*RKYSWF
Trigger: GAACCAGGAATATTTCCTCCATTCCTGCTCTCCCAC...GAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAAATGCAACACATCCATGTTaGGGACCCCTCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: EPRSSCLVTIMVFIRHENATHPC*GPLPST
Trigger: TGTGGATGGGAGGGGTCCCCAACATGGATGTGTTGC...ATTTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp AGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTGTCTCCACGTGGGTaGAATTTCTCACAATCCACT +
Preference number: 4 (lower is better)
Translates to: RALYAMLHLGQMFRSVCLLSPRG*NFSQST
Trigger: AGTGGATTGTGAGAAATTCCACCCACGTGGAGACAG...CAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp TTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGGTCCTGTTAATCCCCTaGGCGCCTTCTCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: FGIPLYPIPTILFSEFTMVLLIP*APSPGV
Trigger: CACACCAGGAGAAGGCGCCCAGGGGATTAACAGGAC...CATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GTGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCCTCCGCATGGCACACTaGGAATTTGGATCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VQWESRNGGNIPGSVTLLLRMAH*EFGSLL
Trigger: AAGCAAAGATCCAAATTCCCAGTGTGCCATGCGGAG...GAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500813.6
CDS-3UTR TCA 90 bp TTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGCGGTCTGCTGTTAATTaGATCAAAGTCAATGACAAT +
Preference number: 4 (lower is better)
Translates to: LHSSSVRTDVPPYLGFRERSAVN*IKVNDN
Trigger: ATTGTCATTGACTTTGATTCAATTAACAGCAGACCG...CTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp GCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGTTCATGATGGCACCGGATCGCAGCAGATaGCAGACAGCTGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: ATYILQPFTSVEFLFMMAPDRSR*QTADAP
Trigger: AGGAGCATCAGCTGTCTGTCATCTGCTGCGATCCGG...TGCCATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp GCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: ALYAMLHLGQMFRSVCLLSRPVS*RKLHSC
Trigger: ACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACT...GAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp CACTTCGGTATGAATTTCCGGAATGTCACCCCGGCCATATTAAACAGGAGCCTCAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: HFGMNFRNVTPAILNRSLSRPVS*RKLHSC
Trigger: ACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACT...GAGGCTCCTGTTTAATATGGCCGGGGTGACATTCCGGAAATTCATACCGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp GAAGGCCACAGCCATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTTTTCTGAATTCACGATaGAGGCGCCGACCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: EGHSHKILWPFQIVVPFLFLNSR*RRRPGN
Trigger: ATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAA...AAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATGGCTGTGGCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR GCA 90 bp AATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTAGTCCAGCTTATTCTCTaGTGTCCTTCTCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: NIPGSVTLLVCQDRCATLVQLIL*CPSPRQ
Trigger: TTGCCTTGGAGAAGGACAGCAGAGAATAAGCTGGAC...TAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR GCA 90 bp CCGGCCATATTAAACAGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATCACTTCTTTTATACCTaGCTGGATGATGAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PAILNRSLAAVASSLSWYHFFYT*LDDELS
Trigger: GCTAAGCTCATCATCCAGGCAGGTATAAAAGAAGTG...ATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCTGTTTAATATGGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp CATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCCCCAGAGGGATAATGTaGCACCACCCTGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: HKILWPFQIVVPFLAGNFPRGIM*HHPVCS
Trigger: ACTGCACACAGGGTGGTGGCACATTATCCCTCTGGG...GAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CCA 90 bp GTTTCTTGCAGGAAACTTCACTCATGTTGGGTCTGTCTCCCACGGAGAAATCTTGCCGACCTGGGAATTTaGATCTTTGCTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VSCRKLHSCWVCLPRRNLADLGI*IFASLC
Trigger: GCACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGC...AAGATTTCTCCGTGGGAGACAGACCCAACATGAGTGAAGTTTCCTGCAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509218.5
CDS-3UTR CCA 90 bp GGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGATGCAGGCGCCGACCTaGGAATTTGGATCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GIPLYPIPTILFSEFTMQMQAPT*EFGSLL
Trigger: AAGCAAAGATCCAAATTCCCAGGTCGGCGCCTGCAT...CTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCTTTTATACCTGCCTaGATGATGAGCTTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: GHYMPCFTWARCSDQCVCSFIPA*MMSLAH
Trigger: ATGCGCTAAGCTCATCATCCAGGCAGGTATAAAAGA...GCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GGAACAACTCATTATTCAGCTAAACGAAATGGAAGAGCTCCATGTGACCAACAAGCAGGGCATGGGCTTTaGGGGCAACAAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: GTTHYSAKRNGRAPCDQQAGHGL*GQQGET
Trigger: TGTCTCTCCTTGTTGCCCCCAAAGCCCATGCCCTGC...TTGTTGGTCACATGGAGCTCTTCCATTTCGTTTAGCTGAATAATGAGTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GTGCACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAACTGTCTCCACGTGGGTaGAATTTCTCACAATCCACT +
Preference number: 4 (lower is better)
Translates to: VHQATTGSPILNPKAIVQLSPRG*NFSQST
Trigger: AGTGGATTGTGAGAAATTCCACCCACGTGGAGACAG...TTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp TGCACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATCATCCATCATCGCTGTaGGGTGCTGGAGAAGTACCT +
Preference number: 4 (lower is better)
Translates to: CTHLASHCTQSRQSCFLNHPSSL*GAGEVP
Trigger: AGGTACTTCTCCAGCACCCCACAGCGATGATGGATG...ATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GAGGAATGTGGTCTAAAGGAAGGCAAGCATCTCCCAAAACTTCTGCTTCAGGCTGAAAGGCGAGGAATGTaGTCTAAAGGAAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: EECGLKEGKHLPKLLLQAERRGM*SKGRQA
Trigger: TGCTTGCCTTCCTTTAGACCACATTCCTCGCCTTTC...AGCCTGAAGCAGAAGTTTTGGGAGATGCTTGCCTTCCTTTAGACCACATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp TTAAACAGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACGCATTCAGCTCCGCATaGCACACTGGGAATTTGGAT +
Preference number: 4 (lower is better)
Translates to: LNRSLAAVASSLSWYLSDAFSSA*HTGNLD
Trigger: ATCCAAATTCCCAGTGTGCCATGCGGAGCTGAATGC...GTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCTGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507631.5
CDS-3UTR TCA 90 bp AGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGTCGAATTTTTGTTCATaGTGGCATTCAGCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: RALYAMLHLGQMFRSVCLSNFCS*WHSAPH
Trigger: ATGCGGAGCTGAATGCCATCATGAACAAAAATTCGA...CAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AGCCATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTTCTGAATTCACGATaGAGGCGCCGACCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SHKILWPFQIVVPFLAGNFLNSR*RRRPGN
Trigger: ATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAA...GTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR GCA 90 bp AACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACTCCAGCAAACACTTCAATaGTACTGTCATTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NSAAVSCLHVGGISHNPLQQTLQ*YCHLRP
Trigger: AGGCCTCAAATGACAGTAGCATTGAAGTGTTTGCTG...GAGTGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp CCACGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCGAACACCAACAGTaGTGCAGTAAGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PRGWNFSQSTHGIGINFLSEHQQ*CSKLSP
Trigger: TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGA...GAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTCACTTTATTTAGGCATCTaGTACAGTGCAGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: NTLAIPNSRPVSCRKLHSLYLGI*YSAGRQ
Trigger: CTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAG...TGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp AATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTCAGCCGACCTGGGAATTTaGATCTTTGCTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: NTLAIPNSRPVSCRKLHSADLGI*IFASLC
Trigger: GCACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGC...TGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp TCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTATCACTGCACCCATTTaGCATCCCATTGTACCCAAT +
Preference number: 4 (lower is better)
Translates to: SSKGTICHASLGPDVQISITAPI*HPIVPN
Trigger: ATTGGGTACAATGGGATGCCAAATGGGTGCAGTGAT...ACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp GGCCTAATTTTCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTACACGTACGGGTATTTaGTGTCCAGCTTATTCTCTG +
Preference number: 4 (lower is better)
Translates to: GLIFFQGHYMPCFTWARCTRTGI*CPAYSL
Trigger: CAGAGAATAAGCTGGACACCAAATACCCGTACGTGT...ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGAAAATTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp GCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCTCTTTTATACCTGCCTaGATGATGAGCTTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: ALYAMLHLGQMFRSVCLLSFIPA*MMSLAH
Trigger: ATGCGCTAAGCTCATCATCCAGGCAGGTATAAAAGA...GAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp CACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAAACAATGCCATGCTTCACTTaGGCCAGATGTTCAGATCAG +
Preference number: 4 (lower is better)
Translates to: HQATTGSPILNPKAIVQTMPCFT*ARCSDQ
Trigger: CTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT...TGTTTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GGAACAACTCATTATTCAGCTAAACGAAATGGAAGAGCTCCATGTGACCAACAAGCAACACATCCATGTTaGGGACCCCTCCCATCCACA +
Preference number: 4 (lower is better)
Translates to: GTTHYSAKRNGRAPCDQQATHPC*GPLPST
Trigger: TGTGGATGGGAGGGGTCCCCAACATGGATGTGTTGC...TTGTTGGTCACATGGAGCTCTTCCATTTCGTTTAGCTGAATAATGAGTTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp ACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTCATGTGAAAGGCGAGGAATGTaGTCTAAAGGAAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: TLAIPNSRPVSCRKLHSCERRGM*SKGRQA
Trigger: TGCTTGCCTTCCTTTAGACCACATTCCTCGCCTTTC...ACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp AAAACTTCTGCTTCAGGCTCCACACTTTATTTAGGCATCTGCTACAGTGCAGGGAAACTTCACTCATGTTaGGTCTGTCTCCCACGGAGA +
Preference number: 4 (lower is better)
Translates to: KTSASGSTLYLGICYSAGKLHSC*VCLPRR
Trigger: TCTCCGTGGGAGACAGACCCAACATGAGTGAAGTTT...CCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509218.5
3UTR CAA 72 bp AATTTTCTTCCAAGGGCACTATATGCCATGCTTCACTaGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: NFLPRALYAMLH*GQMFRSVCLLV
Trigger: GACGAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp CACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCGACAATCTTGTTTTCTaGATTCACGATGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: HPFGIPLYPIPTILFSEFDNLVF*IHDAGA
Trigger: GGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTC...GAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR TCA 90 bp CATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCTGCTGCACTTCGGTATaGATTTCCGGAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: HKILWPFQIVVPFLAGNFCCTSV*ISGMSP
Trigger: GGGTGACATTCCGGAAATTCATACCGAAGTGCAGCA...GAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR GCA 90 bp TTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGTTTCTGAATTCACGATaGAGGCGCCGACCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: FGIPLYPIPTILFSEFTMFLNSR*RRRPGN
Trigger: ATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAA...CATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR GCA 90 bp GGGATAGGAATTAATTTTCTCTCCAGTTGCAGAGGGGCCTTGTACATGAACTGCTCAGATCAGTGTGTCTaGTCGTCCCCATTAAGAACA +
Preference number: 4 (lower is better)
Translates to: GIGINFLSSCRGALYMNCSDQCV*SSPLRT
Trigger: TGTTCTTAATGGGGACGAGCAGACACACTGATCTGA...GCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp TTAAACAGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACTCAGATCAGTGTGTCTaGTCGTCCCCATTAAGAACA +
Preference number: 4 (lower is better)
Translates to: LNRSLAAVASSLSWYLSDSDQCV*SSPLRT
Trigger: TGTTCTTAATGGGGACGAGCAGACACACTGATCTGA...GTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp ATGAGCTTAGCGCATTCATTACAAGGGAACAAGGCAACATACATACTACAGCCTGGGCACTATATGCCATaGTTCACTTGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: MSLAHSLQGNKATYILQPGHYMP*FTWARC
Trigger: ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCC...AGGCTGTAGTATGTATGTTGCCTTGTTCCCTTGTAATGAATGCGCTAAGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GGAACAACTCATTATTCAGCTAAACGAAATGGAAGAGCTCCATGTGACCAACAACTGTCAGGACAGATGTaGCACCCTATCTCGGATTCC +
Preference number: 4 (lower is better)
Translates to: GTTHYSAKRNGRAPCDQQLSGQM*HPISDS
Trigger: GGAATCCGAGATAGGGTGGCACATCTGTCCTGACAG...TTGTTGGTCACATGGAGCTCTTCCATTTCGTTTAGCTGAATAATGAGTTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GGGATAGGAATTAATTTTCTCTCCAGTTGCAGAGGGGCCTTGTACATGAACTGCAATTTTCTCTCCAGTTaGAGAGGGGCCTTGTACATG +
Preference number: 4 (lower is better)
Translates to: GIGINFLSSCRGALYMNCNFLSS*RGALYM
Trigger: CATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATT...GCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp ATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGAATTTTCTCTCCAGTTaGAGAGGGGCCTTGTACATG +
Preference number: 4 (lower is better)
Translates to: MEEIFLVQLHSSSVRTDVNFLSS*RGALYM
Trigger: CATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATT...CACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AAAGGAAGGCAAGCATCTCCCAAAACTTCTGCTTCAGGCTCCACACTTTATTTACTTTATTTAGGCATCTaGTACAGTGCAGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KGRQASPKTSASGSTLYLLYLGI*YSAGRQ
Trigger: CTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAG...TAAATAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGATGCTTGCCTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp ATGAGCTTAGCGCATTCATTACAAGGGAACAAGGCAACATACATACTACAGCCTATGCAGGCGCCGACCTaGGAATTTGGATCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: MSLAHSLQGNKATYILQPMQAPT*EFGSLL
Trigger: AAGCAAAGATCCAAATTCCCAGGTCGGCGCCTGCAT...AGGCTGTAGTATGTATGTTGCCTTGTTCCCTTGTAATGAATGCGCTAAGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CCA 90 bp TCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGATCTTTGCTCTTTTATACCTGCCTaGATGATGAGCTTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: SCFLNSRCRRRPGNLDLCSFIPA*MMSLAH
Trigger: ATGCGCTAAGCTCATCATCCAGGCAGGTATAAAAGA...GCAAAGATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CCA 90 bp GGCCATATTAAACAGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTTCTTTTATACCTGCCTaGATGATGAGCTTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: GHIKQEPRSSCLVTIMVFSFIPA*MMSLAH
Trigger: ATGCGCTAAGCTCATCATCCAGGCAGGTATAAAAGA...AAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCTGTTTAATATGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CCA 90 bp TTATTTGTCCTTCCAGCACATGTAGCAGTGAAGAGAGGCTGCCGGATCGCAGCAGCCTCGTCACTATCATaGTATTTATCAGACATGAAA +
Preference number: 4 (lower is better)
Translates to: LFVLPAHVAVKRGCRIAAASSLS*YLSDMK
Trigger: TTTCATGTCTGATAAATACCATGATAGTGACGAGGC...TGCTGCGATCCGGCAGCCTCTCTTCACTGCTACATGTGCTGGAAGGACAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CCA 90 bp AATAGTTCAAACACATGTAGATTCCATGTGACAAGAGAGACAGTAAGGAAGATTTTCCGGGAGGGTGGCTaGGGGTTTCCCTCAACTCTG +
Preference number: 4 (lower is better)
Translates to: NSSNTCRFHVTRETVRKIFREGG*GFPSTL
Trigger: CAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAA...AATCTTCCTTACTGTCTCTCTTGTCACATGGAATCTACATGTGTTTGAACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp CTTCTCTGTGCTGATAAGAAGGCCACAGCCATAAAATACTCTGGCCATTCCAAACTGTCTCCACGTGGGTaGAATTTCTCACAATCCACT +
Preference number: 4 (lower is better)
Translates to: LLCADKKATAIKYSGHSKLSPRG*NFSQST
Trigger: AGTGGATTGTGAGAAATTCCACCCACGTGGAGACAG...TTTGGAATGGCCAGAGTATTTTATGGCTGTGGCCTTCTTATCAGCACAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
3UTR CAA 72 bp ACATACATACTACAGCCTTTCACATCGGTCGAATTTTaGTTCATGATGGCATTCAGCTCCGCATGGCACACG +
Preference number: 4 (lower is better)
Translates to: TYILQPFTSVEF*FMMAFSSAWHT
Trigger: CGTGTGCCATGCGGAGCTGAATGCCATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR TCA 90 bp CATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGAGACAATCTTGTTTTCTaGATTCACGATGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: HLASHCTQSRQSCFLNSRDNLVF*IHDAGA
Trigger: GGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTC...TCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR TCA 90 bp GTGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCCGGTCTGCTGTTAATTaGATCAAAGTCAATGACAAT +
Preference number: 4 (lower is better)
Translates to: VQWESRNGGNIPGSVTLLRSAVN*IKVNDN
Trigger: ATTGTCATTGACTTTGATTCAATTAACAGCAGACCG...GAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp AATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATGTGTAACTTCAAGATaGAAGGCATTAGCAACCTCT +
Preference number: 4 (lower is better)
Translates to: NIPGSVTLLVCQDRCATLCVTSR*KALATS
Trigger: AGAGGTTGCTAATGCCTTTCATCTTGAAGTTACACA...TAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp CGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGATGGGAATTTGGATCTTTaGTTCTCTGTGCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: RQSCFLNSRCRRRPGNLDGNLDL*FSVLIR
Trigger: TCTTATCAGCACAGAGAAGCAAAGATCCAAATTCCC...ATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR GCA 90 bp TCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCGGGAATTTGGATCTTTaGTTCTCTGTGCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: SHCTQSRQSCFLNSRCRRGNLDL*FSVLIR
Trigger: TCTTATCAGCACAGAGAAGCAAAGATCCAAATTCCC...GCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR GCA 90 bp TTAAACAGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACCACTTCTTTTATACCTaGCTGGATGATGAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: LNRSLAAVASSLSWYLSDHFFYT*LDDELS
Trigger: GCTAAGCTCATCATCCAGGCAGGTATAAAAGAAGTG...GTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp ATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGATTGAGCCTCGCAGCAGTTaGCTCGTCACTATCATGGTA +
Preference number: 4 (lower is better)
Translates to: MKGISNLLEDDNPNLLEIEPRSS*LVTIMV
Trigger: TACCATGATAGTGACGAGGCAACTGCTGCGAGGCTC...AATCTCCAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp TTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCAGTTGCAGAGGGTCAGATCAGTGTGTCTaGTCGTCCCCATTAAGAACA +
Preference number: 4 (lower is better)
Translates to: FSQSTHGIGINFLSSCRGSDQCV*SSPLRT
Trigger: TGTTCTTAATGGGGACGAGCAGACACACTGATCTGA...CCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAACAGCAAACACTTCAATaGTACTGTCATTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RSLAAVASSLSWYLSDMKQQTLQ*YCHLRP
Trigger: AGGCCTCAAATGACAGTAGCATTGAAGTGTTTGCTG...TTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp CATCACTGCACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCAGCAAACACTTCAATaGTACTGTCATTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HHCTHLASHCTQSRQSCFQQTLQ*YCHLRP
Trigger: AGGCCTCAAATGACAGTAGCATTGAAGTGTTTGCTG...AAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR TCA 90 bp AGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAACAATCTTCTGGAGATTaGATGAGATGTAACTCACTG +
Preference number: 4 (lower is better)
Translates to: RSLAAVASSLSWYLSDMKQSSGD*MRCNSL
Trigger: CAGTGAGTTACATCTCATTCAATCTCCAGAAGATTG...TTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR TCA 90 bp GGGATAGGAATTAATTTTCTCTCCAGTTGCAGAGGGGCCTTGTACATGAACTGCTGTGTAACTTCAAGATaGAAGGCATTAGCAACCTCT +
Preference number: 4 (lower is better)
Translates to: GIGINFLSSCRGALYMNCCVTSR*KALATS
Trigger: AGAGGTTGCTAATGCCTTTCATCTTGAAGTTACACA...GCAGTTCATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATTAATTCCTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp GCATCTCCCAAAACTTCTGCTTCAGGCTCCACACTTTATTTAGGCATCTGCTACGGGAATTTGGATCTTTaGTTCTCTGTGCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: ASPKTSASGSTLYLGICYGNLDL*FSVLIR
Trigger: TCTTATCAGCACAGAGAAGCAAAGATCCAAATTCCC...GTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR GCA 90 bp CCACGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCCACTTCTTTTATACCTaGCTGGATGATGAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PRGWNFSQSTHGIGINFLHFFYT*LDDELS
Trigger: GCTAAGCTCATCATCCAGGCAGGTATAAAAGAAGTG...GAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp CACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCATCTCCCAAAACTTCTaGTTCAGGCTCCACACTTTA +
Preference number: 4 (lower is better)
Translates to: HPFGIPLYPIPTILFSEFISQNF*FRLHTL
Trigger: TAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGAT...GAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAAATCACTTCTGGCACACTGGGAATTTaGATCTTTGCTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AAVASSLSWYLSDMKITSGTLGI*IFASLC
Trigger: GCACAGAGAAGCAAAGATCCAAATTCCCAGTGTGCC...AGAAGTGATTTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507631.5
CDS-3UTR CCA 90 bp GCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGTTCATGATGGCACTCCGCATGGCACACTaGGAATTTGGATCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ATYILQPFTSVEFLFMMALRMAH*EFGSLL
Trigger: AAGCAAAGATCCAAATTCCCAGTGTGCCATGCGGAG...TGCCATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507631.5
CDS-3UTR GCA 90 bp AAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGGGTTTCCCTCAACTCTaGAGCAAACACTTCAATGCT +
Preference number: 4 (lower is better)
Translates to: KMKGISNLLEDDNPNLLEGFPQL*SKHFNA
Trigger: AGCATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACC...CTCCAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp CATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCACGAATCTCCCAAAACTTCTaGTTCAGGCTCCACACTTTA +
Preference number: 4 (lower is better)
Translates to: HLASHCTQSRQSCFLNSRISQNF*FRLHTL
Trigger: TAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGAT...TCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CCA 90 bp GGAACAACTCATTATTCAGCTAAACGAAATGGAAGAGCTCCATGTGACCAACAAACACGTACGGGTATTTaGTGTCCAGCTTATTCTCTG +
Preference number: 4 (lower is better)
Translates to: GTTHYSAKRNGRAPCDQQTRTGI*CPAYSL
Trigger: CAGAGAATAAGCTGGACACCAAATACCCGTACGTGT...TTGTTGGTCACATGGAGCTCTTCCATTTCGTTTAGCTGAATAATGAGTTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CCA 90 bp CACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAAACAGCCTCGTCACTATCATaGTATTTATCAGACATGAAA +
Preference number: 4 (lower is better)
Translates to: HQATTGSPILNPKAIVQTASSLS*YLSDMK
Trigger: TTTCATGTCTGATAAATACCATGATAGTGACGAGGC...TGTTTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR TCA 90 bp AAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGTCGAATTTTTGTTCATaGTGGCATTCAGCTCCGCAT +
Preference number: 4 (lower is better)
Translates to: KMKGISNLLEDDNPNLLESNFCS*WHSAPH
Trigger: ATGCGGAGCTGAATGCCATCATGAACAAAAATTCGA...CTCCAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR TCA 90 bp AATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTCGGTCTGCTGTTAATTaGATCAAAGTCAATGACAAT +
Preference number: 4 (lower is better)
Translates to: NGGNIPGSVTLLVCQDRCRSAVN*IKVNDN
Trigger: ATTGTCATTGACTTTGATTCAATTAACAGCAGACCG...ACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR TCA 90 bp CAAGGGAACAAGGCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGTGTGTAACTTCAAGATaGAAGGCATTAGCAACCTCT +
Preference number: 4 (lower is better)
Translates to: QGNKATYILQPFTSVEFLCVTSR*KALATS
Trigger: AGAGGTTGCTAATGCCTTTCATCTTGAAGTTACACA...CAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGCCTTGTTCCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp AAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTGGGAATTTGGATCTTTaGTTCTCTGTGCTGATAAGA +
Preference number: 4 (lower is better)
Translates to: KILWPFQIVVPFLAGNFTGNLDL*FSVLIR
Trigger: TCTTATCAGCACAGAGAAGCAAAGATCCAAATTCCC...AGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR GCA 90 bp AAGGCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGTTCATGATGAATTTTCTCTCCAGTTaGAGAGGGGCCTTGTACATG +
Preference number: 4 (lower is better)
Translates to: KATYILQPFTSVEFLFMMNFLSS*RGALYM
Trigger: CATGTACAAGGCCCCTCTGCAACTGGAGAGAAAATT...CATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
CDS-3UTR GCA 90 bp AATAGTTCAAACACATGTAGATTCCATGTGACAAGAGAGACAGTAAGGAAGATTGAACACCAACAGTGCTaGAGTAAGCTGTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: NSSNTCRFHVTRETVRKIEHQQC*SKLSPR
Trigger: ACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTC...AATCTTCCTTACTGTCTCTCTTGTCACATGGAATCTACATGTGTTTGAACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp TTCAAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGACACGTACGGGTATTTaGTGTCCAGCTTATTCTCTG +
Preference number: 4 (lower is better)
Translates to: FKMKGISNLLEDDNPNLLTRTGI*CPAYSL
Trigger: CAGAGAATAAGCTGGACACCAAATACCCGTACGTGT...CAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCATCTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR TCA 90 bp ACAAGGGAACAAGGCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTCAATCTTCTGGAGATTaGATGAGATGTAACTCACTG +
Preference number: 4 (lower is better)
Translates to: TREQGNIHTTAFHIGRIFQSSGD*MRCNSL
Trigger: CAGTGAGTTACATCTCATTCAATCTCCAGAAGATTG...AAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGCCTTGTTCCCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CCA 90 bp ACAACTCATTATTCAGCTAAACGAAATGGAAGAGCTCCATGTGACCAACAAACCAGCCATAAAATACTCTaGCCATTCCAAATAGTCGTC +
Preference number: 4 (lower is better)
Translates to: TTHYSAKRNGRAPCDQQTSHKIL*PFQIVV
Trigger: GACGACTATTTGGAATGGCCAGAGTATTTTATGGCT...GGTTTGTTGGTCACATGGAGCTCTTCCATTTCGTTTAGCTGAATAATGAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp ATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGATTTCTTTTATACCTGCCTaGATGATGAGCTTAGCGCAT +
Preference number: 4 (lower is better)
Translates to: MKGISNLLEDDNPNLLEISFIPA*MMSLAH
Trigger: ATGCGCTAAGCTCATCATCCAGGCAGGTATAAAAGA...AATCTCCAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CCA 90 bp CGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCTCCGAATACCCTAGAATGTaGAATACAAAATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RGWNFSQSTHGIGINFLSEYPRM*NTKSQR
Trigger: TCTCTGAGATTTTGTATTCCACATTCTAGGGTATTC...GGAGAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
CDS-3UTR TCA 90 bp TTCAAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGCAATCTTCTGGAGATTaGATGAGATGTAACTCACTG +
Preference number: 4 (lower is better)
Translates to: FKMKGISNLLEDDNPNLLQSSGD*MRCNSL
Trigger: CAGTGAGTTACATCTCATTCAATCTCCAGAAGATTG...CAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCATCTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp AATAGTTCAAACACATGTAGATTCCATGTGACAAGAGAGACAGTAAGGAAGATTAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGT +
Preference number: 4 (lower is better)
Translates to: NSSNTCRFHVTRETVRKISRPVS*RKLHSC
Trigger: ACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACT...AATCTTCCTTACTGTCTCTCTTGTCACATGGAATCTACATGTGTTTGAACTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR GCA 90 bp AATAGTTCAAACACATGTAGATTCCATGTGACAAGAGAGACAGTAAGGAAGATTGGTTTCCCTCAACTCTaGAGCAAACACTTCAATGCT +
Preference number: 4 (lower is better)
Translates to: NSSNTCRFHVTRETVRKIGFPQL*SKHFNA
Trigger: AGCATTGAAGTGTTTGCTGCAGAGTTGAGGGAAACC...AATCTTCCTTACTGTCTCTCTTGTCACATGGAATCTACATGTGTTTGAACTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CCA 90 bp GCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAAATCACTTCTGCCTCGTCACTATCATaGTATTTATCAGACATGAAA +
Preference number: 4 (lower is better)
Translates to: AAVASSLSWYLSDMKITSASSLS*YLSDMK
Trigger: TTTCATGTCTGATAAATACCATGATAGTGACGAGGC...AGAAGTGATTTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR TCA 90 bp AAGGCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGTTCATGATGCGGTCTGCTGTTAATTaGATCAAAGTCAATGACAAT +
Preference number: 4 (lower is better)
Translates to: KATYILQPFTSVEFLFMMRSAVN*IKVNDN
Trigger: ATTGTCATTGACTTTGATTCAATTAACAGCAGACCG...CATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CCA 90 bp TTCAAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGCCTCGTCACTATCATaGTATTTATCAGACATGAAA +
Preference number: 4 (lower is better)
Translates to: FKMKGISNLLEDDNPNLLASSLS*YLSDMK
Trigger: TTTCATGTCTGATAAATACCATGATAGTGACGAGGC...CAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCATCTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CCA 90 bp ACAACTCATTATTCAGCTAAACGAAATGGAAGAGCTCCATGTGACCAACAAACCGAATACCCTAGAATGTaGAATACAAAATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: TTHYSAKRNGRAPCDQQTEYPRM*NTKSQR
Trigger: TCTCTGAGATTTTGTATTCCACATTCTAGGGTATTC...GGTTTGTTGGTCACATGGAGCTCTTCCATTTCGTTTAGCTGAATAATGAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
CDS GCA 90 bp TCACTCATGTTGGGTCCGCACGGCTGGCCCCCGCCCACCATCCGGTaGCGGCTCCGCGCGCAGGCCGGTGCTCGTCCCCGCCGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: SLMLGPHGWPPPTIR*RLRAQAGARPRRRR
Trigger: ACGGCGGCGGCGGGGACGAGCACCGGCCTGCGCGCGGAGCCGGCACCGGATGGTGGGCGGGGGCCAGCCGTGCGGACCCAACATGAGTGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357067.7
ENST00000500813.6
CDS GCA 90 bp GCAGGGCGGCAGTGCCATCCGGTGCCGGCTCCGCGCGCAGGCCGGTaGTCGTCCCCGCCGCCGCCGTGCTCAGGGAAGGAAGTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: AGRQCHPVPAPRAGR*SSPPPPCSGKEVGG
Trigger: TCCCCCGACTTCCTTCCCTGAGCACGGCGGCGGCGGGGACGAGCACCGGCCTGCGCGCGGAGCCGGCACCGGATGGCACTGCCGCCCTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508994.1
CDS GCA 90 bp TCACTCATGTTGGGTCATCCGGTGCCGGCTCCGCGCGCAGGCCGGTaGTCGTCCCCGCCGCCGCCGTGCTCAGGGAAGGAAGTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: SLMLGHPVPAPRAGR*SSPPPPCSGKEVGG
Trigger: TCCCCCGACTTCCTTCCCTGAGCACGGCGGCGGCGGGGACGAGCACCGGCCTGCGCGCGGAGCCGGCACCGGATGACCCAACATGAGTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438320.7
ENST00000507631.5
CDS TCA 90 bp CACCGTCCCAGGCACACCCCACGCCGCTCGCAACCCCGTCAGCTCTaGTCCAGGGCCTACACCCGGCATTCCCAACCCACACACGGGCGC +
Preference number: 5 (lower is better)
Translates to: HRPRHTPRRSQPRQL*SRAYTRHSQPTHGR
Trigger: GCGCCCGTGTGTGGGTTGGGAATGCCGGGTGTAGGCCCTGGATCAGAGCTGACGGGGTTGCGAGCGGCGTGGGGTGTGCCTGGGACGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503820.5
ENST00000503988.1
CDS CCA 90 bp CTACACCCGGCATTCCCAACCCACACACGGGCGCAGGAAGGGATGTaGTGTTCAGACGCCCAGCACCACCTCCCGGGGCACTCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: LHPAFPTHTRAQEGM*CSDAQHHLPGHSKG
Trigger: CCCCTTGGAGTGCCCCGGGAGGTGGTGCTGGGCGTCTGAACACCACATCCCTTCCTGCGCCCGTGTGTGGGTTGGGAATGCCGGGTGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503820.5
ENST00000503988.1
CDS-3UTR CAA 90 bp CCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCGGAGCCTCGCAGCAGTaGCCTCGTCACTATCATGGT +
Preference number: 5 (lower is better)
Translates to: PASQDTRRGGTLVLALCTGASQQ*PRHYHG
Trigger: ACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCC...GGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CAA 90 bp CCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGGGAGCCTCGCAGCAGTaGCCTCGTCACTATCATGGT +
Preference number: 5 (lower is better)
Translates to: PPYLGFREGGWGFPSTLQGASQQ*PRHYHG
Trigger: ACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCC...CTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAGATAGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp CCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGTTGCAGAGGGGCCTaGTACATGAACTGCGTTGGC +
Preference number: 5 (lower is better)
Translates to: PASQDTRRGGTLVLALCTSCRGA*YMNCVG
Trigger: GCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACT...GGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS GCA 90 bp TCTCCCAAAACTTCTGCTTCAGGCTCCACACTTTATTTAGGCATCTaGTACAGTGCAGGGCGGCAGTGCCATCCGGTGCCGGCTCCGCGC +
Preference number: 5 (lower is better)
Translates to: SPKTSASGSTLYLGI*YSAGRQCHPVPAPR
Trigger: GCGCGGAGCCGGCACCGGATGGCACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508994.1
CDS CCA 90 bp CATCTGCTACAGTGCAGGGCGGCAGTGCCTAAGACAAGGATGCAGTaGAGAGTGGGTGCTGGGAACCACGGTCACCCACTGATTACGCTG +
Preference number: 5 (lower is better)
Translates to: HLLQCRAAVPKTRMQ*RVGAGNHGHPLITL
Trigger: CAGCGTAATCAGTGGGTGACCGTGGTTCCCAGCACCCACTCTCCACTGCATCCTTGTCTTAGGCACTGCCGCCCTGCACTGTAGCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514754.5
CDS-3UTR CAA 90 bp GACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCACCACAGAGTTGCAGAGGGGCCTaGTACATGAACTGCGTTGGC +
Preference number: 5 (lower is better)
Translates to: DTRRGGTLVLALCTRPPQSCRGA*YMNCVG
Trigger: GCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACT...CTGTGGTGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp CTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCGCCGACCTGGGAATTaGGATCTTTGCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LLVCQDRCATLSRIPGGWRRPGN*DLCFSV
Trigger: CACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGCG...CCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS GCA 90 bp GGCTCCACACTTTATTTAGGCATCTGCTACAGTGCAGGGCGGCAGTaGCTAAGACAAGGATGCAGTGGAGAGTGGGTGCTGGGAACCACG +
Preference number: 5 (lower is better)
Translates to: GSTLYLGICYSAGRQ*LRQGCSGEWVLGTT
Trigger: CGTGGTTCCCAGCACCCACTCTCCACTGCATCCTTGTCTTAGGCACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514754.5
CDS-3UTR CAA 90 bp CCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCTGGCACACTGGGAATTaGGATCTTTGCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PASQDTRRGGTLVLALCTWHTGN*DLCFSV
Trigger: CACAGAGAAGCAAAGATCCAAATTCCCAGTGTGCCA...GGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507631.5
CDS TCA 90 bp CCTTCTCCTGGTGTGGCTGAACGCCCACTAGAGCCCTGTGAGGACTaGGGCCCAGCTGTAGAAACAGAGAGAACTGGAGCTCGAATACAA +
Preference number: 5 (lower is better)
Translates to: PSPGVAERPLEPCED*GPAVETERTGARIQ
Trigger: TTGTATTCGAGCTCCAGTTCTCTCTGTTTCTACAGCTGGGCCTCAGTCCTCACAGGGCTCTAGTGGGCGTTCAGCCACACCAGGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503820.5
ENST00000503988.1
ENST00000510307.5
CDS-3UTR CAA 90 bp AAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTCACACGTACGGGTATTaGGTGTCCAGCTTATTCTCT +
Preference number: 5 (lower is better)
Translates to: KSHQHPSQPGHKKGRHSRHTYGY*VSSLFS
Trigger: AGAGAATAAGCTGGACACCAAATACCCGTACGTGTG...ACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CAA 90 bp AGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTATGCCATGCTTCACTaGGGCCAGATGTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: SIPASQDTRRGGTLVLALYAMLH*GQMFRS
Trigger: TGATCTGAACATCTGGCCCAAGTGAAGCATGGCATA...CAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp GTGCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGAAACTTCACTCATGTaGGGTCCGCACGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VQWESRNGGNIPGSVTLLETSLM*GPHGWP
Trigger: GGGCCAGCCGTGCGGACCCAACATGAGTGAAGTTTC...GAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357067.7
ENST00000500813.6
CDS-3UTR CAA 90 bp GCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACATCACTGCACCCATTaGGCATCCCATTGTACCCAA +
Preference number: 5 (lower is better)
Translates to: ARAQKSSEHQQCCSKLSPHHCTH*ASHCTQ
Trigger: TTGGGTACAATGGGATGCCAAATGGGTGCAGTGATG...TGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CAA 90 bp CCGGCCATATTAAACAGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATGGAGCCTCGCAGCAGTaGCCTCGTCACTATCATGGT +
Preference number: 5 (lower is better)
Translates to: PAILNRSLAAVASSLSWYGASQQ*PRHYHG
Trigger: ACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCC...ATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCTGTTTAATATGGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CAA 90 bp GCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTGGCAACACATCCATGTaGGGGACCCCTCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: AVGEQEWRKYSWFSYTPRGNTSM*GTPPIH
Trigger: GTGGATGGGAGGGGTCCCCAACATGGATGTGTTGCC...ACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp GGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCGGCAACACATCCATGTaGGGGACCCCTCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: GRAGMEEIFLVQLHSSSVGNTSM*GTPPIH
Trigger: GTGGATGGGAGGGGTCCCCAACATGGATGTGTTGCC...GACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp ATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTCCCCAAGTTGCAGAGGGGCCTaGTACATGAACTGCGTTGGC +
Preference number: 5 (lower is better)
Translates to: MPCFTWARCSDQCVCSSPSCRGA*YMNCVG
Trigger: GCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACT...TGGGGACGAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp GGCCTAATTTTCTTCCAAGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTGAAACTTCACTCATGTaGGGTCCGCACGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: GLIFFQGHYMPCFTWARCETSLM*GPHGWP
Trigger: GGGCCAGCCGTGCGGACCCAACATGAGTGAAGTTTC...ACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCTTGGAAGAAAATTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357067.7
ENST00000500813.6
CDS-3UTR CAA 90 bp TTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGCATCACTGCACCCATTaGGCATCCCATTGTACCCAA +
Preference number: 5 (lower is better)
Translates to: LHSSSVRTDVPPYLGFREHHCTH*ASHCTQ
Trigger: TTGGGTACAATGGGATGCCAAATGGGTGCAGTGATG...CTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CAA 90 bp CTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGACATCGGTCGAATTTTaGTTCATGATGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: LLVCQDRCATLSRIPGGWTSVEF*FMMAFS
Trigger: GCTGAATGCCATCATGAACAAAAATTCGACCGATGT...CCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp CGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGGGTGGCTGGGAAGTCAATGACAATCTaGCTGCACTTCGGTATGAAT +
Preference number: 5 (lower is better)
Translates to: RLSGQMCHPISDSGRVAGKSMTI*LHFGMN
Trigger: ATTCATACCGAAGTGCAGCAAGATTGTCATTGACTT...CCCAGCCACCCTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS TCA 90 bp AGACACATTCAGTCCACTGCACTCCCCTTTGAAGAAATGTTACAGTaGGCCACGCATGTGGCTTTCTGCATGATGCCGGACACAGGCCAC +
Preference number: 5 (lower is better)
Translates to: RHIQSTALPFEEMLQ*ATHVAFCMMPDTGH
Trigger: GTGGCCTGTGTCCGGCATCATGCAGAAAGCCACATGCGTGGCTCACTGTAACATTTCTTCAAAGGGGAGTGCAGTGGACTGAATGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513383.5
CDS GCA 90 bp AACTTCTGCTTCAGGCTCCACACTTTATTTAGGCATCTGCTACAGTaGAGGGCGGCAGTGCCTAAGACAAGGATGCAGTGGAGAGTGGGT +
Preference number: 5 (lower is better)
Translates to: NFCFRLHTLFRHLLQ*RAAVPKTRMQWRVG
Trigger: ACCCACTCTCCACTGCATCCTTGTCTTAGGCACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514754.5
CDS-3UTR CAA 90 bp CATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGAAGTCAATGACAATCTaGCTGCACTTCGGTATGAAT +
Preference number: 5 (lower is better)
Translates to: HPSQPGHKKGRHSRSSPVKSMTI*LHFGMN
Trigger: ATTCATACCGAAGTGCAGCAAGATTGTCATTGACTT...CACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CAA 90 bp CTCGGATTCCGGGAGGGTGGCTGGGGGTTTCCCTCAACTCTGCAGCAAACACTTAACTCACTGAAGCTTTaGACTCGGTCTGCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: LGFREGGWGFPSTLQQTLNSLKL*TRSAVN
Trigger: ATTAACAGCAGACCGAGTCAAAAGCTTCAGTGAGTT...AAGTGTTTGCTGCAGAGTTGAGGGAAACCCCCAGCCACCCTCCCGGAATCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp AGCCAGGACACAAGAAGGGGAGGCACTCTCGTTCTAGCCCTGTGCACCAGGCCATTTAGATGCCTACTTTaGCCATACTGGCTAGTAAGA +
Preference number: 5 (lower is better)
Translates to: SQDTRRGGTLVLALCTRPFRCLL*PYWLVR
Trigger: TCTTACTAGCCAGTATGGCAAAAGTAGGCATCTAAA...TGGCCTGGTGCACAGGGCTAGAACGAGAGTGCCTCCCCTTCTTGTGTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CAA 90 bp AGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGATATGCCATGCTTCACTaGGGCCAGATGTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: RRAPNTNSAAVSCLHVGGYAMLH*GQMFRS
Trigger: TGATCTGAACATCTGGCCCAAGTGAAGCATGGCATA...TCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp TCCTCTGAAGAGCCACCAGCATCCCAGCCAGCCAGGACACAAGAAGGGGAGGCACAATGCTACTGTCATTaGAGGCCTAATTTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: SSEEPPASQPARTQEGEAQCYCH*RPNFLP
Trigger: TGGAAGAAAATTAGGCCTCAAATGACAGTAGCATTG...TGCCTCCCCTTCTTGTGTCCTGGCTGGCTGGGATGCTGGTGGCTCTTCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp GGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCGAAACTTCACTCATGTaGGGTCATCCGGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: GGNIPGSVTLLVCQDRCAETSLM*GHPVPA
Trigger: AGCCGGCACCGGATGACCCAACATGAGTGAAGTTTC...GGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438320.7
CDS-3UTR CAA 90 bp CGAATTTTTGTTCATGATGGCATTCAGCTCCGCATGGCACACGTACGGGTATTTGGAGCCTCGCAGCAGTaGCCTCGTCACTATCATGGT +
Preference number: 5 (lower is better)
Translates to: RIFVHDGIQLRMAHVRVFGASQQ*PRHYHG
Trigger: ACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCC...AAATACCCGTACGTGTGCCATGCGGAGCTGAATGCCATCATGAACAAAAATTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CAA 90 bp CCACGTGGGTGGAATTTCTCACAATCCACTCACGGGATAGGAATTAATTTTCTCGGCAACACATCCATGTaGGGGACCCCTCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: PRGWNFSQSTHGIGINFLGNTSM*GTPPIH
Trigger: GTGGATGGGAGGGGTCCCCAACATGGATGTGTTGCC...GAGAAAATTAATTCCTATCCCGTGAGTGGATTGTGAGAAATTCCACCCACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS TCA 90 bp GAAGGAAGACAACACAAAAACGGGGTGGGTACCACGGAGAAATCTTaGGAAAGGCGAGGAATGTGGTCTAAAGGAAGGCAAGCATCTCCC +
Preference number: 5 (lower is better)
Translates to: EGRQHKNGVGTTEKS*ERRGMWSKGRQASP
Trigger: GGGAGATGCTTGCCTTCCTTTAGACCACATTCCTCGCCTTTCTCAAGATTTCTCCGTGGTACCCACCCCGTTTTTGTGTTGTCTTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503988.1
ENST00000514754.5
CDS GCA 90 bp CTCAGTCTGATCAACGTACGGGTATTTGGTGTCCAGCTTATTCTCTaGTGTCCTTCTCCAAGGCAACACGTCATCACTGCACCCATTTGG +
Preference number: 5 (lower is better)
Translates to: LSLINVRVFGVQLIL*CPSPRQHVITAPIW
Trigger: CCAAATGGGTGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGCTGGACACCAAATACCCGTACGTTGATCAGACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513383.5
CDS-3UTR CAA 90 bp AATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTACGCCGACCTGGGAATTaGGATCTTTGCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: NIPGSVTLLVCQDRCATLRRPGN*DLCFSV
Trigger: CACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGCG...TAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CAA 90 bp ATGAGCTTAGCGCATTCATTACAAGGGAACAAGGCAACATACATACTACAGCCTGGCAACACATCCATGTaGGGGACCCCTCCCATCCAC +
Preference number: 5 (lower is better)
Translates to: MSLAHSLQGNKATYILQPGNTSM*GTPPIH
Trigger: GTGGATGGGAGGGGTCCCCAACATGGATGTGTTGCC...AGGCTGTAGTATGTATGTTGCCTTGTTCCCTTGTAATGAATGCGCTAAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp AGGAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAAAGTTGCAGAGGGGCCTaGTACATGAACTGCGTTGGC +
Preference number: 5 (lower is better)
Translates to: RSLAAVASSLSWYLSDMKSCRGA*YMNCVG
Trigger: GCCAACGCAGTTCATGTACAAGGCCCCTCTGCAACT...TTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp TGTGGTCTAAAGGAAGGCAAGCATCTCCCAAAACTTCTGCTTCAGGCTCCACACGGTCACGGAGAAATCTaGAGAAAGGCGAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: CGLKEGKHLPKLLLQAPHGHGEI*RKARNV
Trigger: CACATTCCTCGCCTTTCTCAAGATTTCTCCGTGACC...GTGTGGAGCCTGAAGCAGAAGTTTTGGGAGATGCTTGCCTTCCTTTAGACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CAA 90 bp ATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTCATCACTGCACCCATTaGGCATCCCATTGTACCCAA +
Preference number: 5 (lower is better)
Translates to: IPTILFSEFTMQAPTWEFHHCTH*ASHCTQ
Trigger: TTGGGTACAATGGGATGCCAAATGGGTGCAGTGATG...AAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
CDS-3UTR CAA 90 bp ACCAACAGTGCTGCAGTAAGCTGTCTCCACGTGGGTGGAATTTCTCACAATCCACACACGTACGGGTATTaGGTGTCCAGCTTATTCTCT +
Preference number: 5 (lower is better)
Translates to: TNSAAVSCLHVGGISHNPHTYGY*VSSLFS
Trigger: AGAGAATAAGCTGGACACCAAATACCCGTACGTGTG...TGGATTGTGAGAAATTCCACCCACGTGGAGACAGCTTACTGCAGCACTGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CAA 90 bp ATGGAGCCAGGGCACAGAAGAGCTCCGAACACCAACAGTGCTGCAGTAAGCTGTAAGTCAATGACAATCTaGCTGCACTTCGGTATGAAT +
Preference number: 5 (lower is better)
Translates to: MEPGHRRAPNTNSAAVSCKSMTI*LHFGMN
Trigger: ATTCATACCGAAGTGCAGCAAGATTGTCATTGACTT...ACAGCTTACTGCAGCACTGTTGGTGTTCGGAGCTCTTCTGTGCCCTGGCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp TTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTATCTCGGATTCCGGGAGTTTAGATGCCTACTTTaGCCATACTGGCTAGTAAGA +
Preference number: 5 (lower is better)
Translates to: LHSSSVRTDVPPYLGFREFRCLL*PYWLVR
Trigger: TCTTACTAGCCAGTATGGCAAAAGTAGGCATCTAAA...CTCCCGGAATCCGAGATAGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp GAGCCTCGCAGCAGTTGCCTCGTCACTATCATGGTATTTATCAGACATGAAAATGAAACTTCACTCATGTaGGGTCATCCGGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: EPRSSCLVTIMVFIRHENETSLM*GHPVPA
Trigger: AGCCGGCACCGGATGACCCAACATGAGTGAAGTTTC...ATTTTCATGTCTGATAAATACCATGATAGTGACGAGGCAACTGCTGCGAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507631.5
CDS-3UTR CAA 90 bp TTCTGCTTCAGGCTCCACACTTTATTTAGGCATCTGCTACAGTGCAGGGCGGCAGAAACTTCACTCATGTaGGGTCACGGAGAAATCTTG +
Preference number: 5 (lower is better)
Translates to: FCFRLHTLFRHLLQCRAAETSLM*GHGEIL
Trigger: CAAGATTTCTCCGTGACCCAACATGAGTGAAGTTTC...TGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CAA 90 bp ACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGATCTGAAACTTCACTCATGTaGGGTCTGTCTCCCACGGAG +
Preference number: 5 (lower is better)
Translates to: TILFSEFTMQAPTWEFGSETSLM*GLSPTE
Trigger: CTCCGTGGGAGACAGACCCAACATGAGTGAAGTTTC...AGATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509218.5
CDS-3UTR CAA 90 bp TACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGCCAATCCCGACAATCTaGTTTTCTGAATTCACGATG +
Preference number: 5 (lower is better)
Translates to: YPIPTILFSEFTMQAPTWPIPTI*FSEFTM
Trigger: CATCGTGAATTCAGAAAACAAGATTGTCGGGATTGG...CCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CAA 90 bp TACCCAATCCCGACAATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGAACTCACTGAAGCTTTaGACTCGGTCTGCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: YPIPTILFSEFTMQAPTWNSLKL*TRSAVN
Trigger: ATTAACAGCAGACCGAGTCAAAAGCTTCAGTGAGTT...CCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGATTGTCGGGATTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CAA 90 bp ATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGCTCGTCCCCATTTAGATGCCTACTTTaGCCATACTGGCTAGTAAGA +
Preference number: 5 (lower is better)
Translates to: MPCFTWARCSDQCVCSSPFRCLL*PYWLVR
Trigger: TCTTACTAGCCAGTATGGCAAAAGTAGGCATCTAAA...TGGGGACGAGCAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp CTTCTCTGTGCTGATAAGAAGGCCACAGCCATAAAATACTCTGGCCATTCCAAACATCACTGCACCCATTaGGCATCCCATTGTACCCAA +
Preference number: 5 (lower is better)
Translates to: LLCADKKATAIKYSGHSKHHCTH*ASHCTQ
Trigger: TTGGGTACAATGGGATGCCAAATGGGTGCAGTGATG...TTTGGAATGGCCAGAGTATTTTATGGCTGTGGCCTTCTTATCAGCACAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507543.5
ENST00000513348.5
CDS-3UTR CAA 90 bp GGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACATCGGTCGAATTTTaGTTCATGATGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: GGNIPGSVTLLVCQDRCATSVEF*FMMAFS
Trigger: GCTGAATGCCATCATGAACAAAAATTCGACCGATGT...GGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp ATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGATTGGAGCCTCGCAGCAGTaGCCTCGTCACTATCATGGT +
Preference number: 5 (lower is better)
Translates to: MKGISNLLEDDNPNLLEIGASQQ*PRHYHG
Trigger: ACCATGATAGTGACGAGGCAACTGCTGCGAGGCTCC...AATCTCCAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CAA 90 bp AGGGCACTATATGCCATGCTTCACTTGGGCCAGATGTTCAGATCAGTGTGTCTGAACTCACTGAAGCTTTaGACTCGGTCTGCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: RALYAMLHLGQMFRSVCLNSLKL*TRSAVN
Trigger: ATTAACAGCAGACCGAGTCAAAAGCTTCAGTGAGTT...CAGACACACTGATCTGAACATCTGGCCCAAGTGAAGCATGGCATATAGTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp CTAAAGGAAGGCAAGCATCTCCCAAAACTTCTGCTTCAGGCTCCACACTTTATTGGTCACGGAGAAATCTaGAGAAAGGCGAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: LKEGKHLPKLLLQAPHFIGHGEI*RKARNV
Trigger: CACATTCCTCGCCTTTCTCAAGATTTCTCCGTGACC...AATAAAGTGTGGAGCCTGAAGCAGAAGTTTTGGGAGATGCTTGCCTTCCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CAA 90 bp TCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGATCTTTGCCCAATCCCGACAATCTaGTTTTCTGAATTCACGATG +
Preference number: 5 (lower is better)
Translates to: SCFLNSRCRRRPGNLDLCPIPTI*FSEFTM
Trigger: CATCGTGAATTCAGAAAACAAGATTGTCGGGATTGG...GCAAAGATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CAA 90 bp AAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCACCCTACATCGGTCGAATTTTaGTTCATGATGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: KYSWFSYTPRLSGQMCHPTSVEF*FMMAFS
Trigger: GCTGAATGCCATCATGAACAAAAATTCGACCGATGT...AGGGTGGCACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp GCAGTGGGAGAGCAGGAATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTTTTAGATGCCTACTTTaGCCATACTGGCTAGTAAGA +
Preference number: 5 (lower is better)
Translates to: AVGEQEWRKYSWFSYTPRFRCLL*PYWLVR
Trigger: TCTTACTAGCCAGTATGGCAAAAGTAGGCATCTAAA...ACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCATTCCTGCTCTCCCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp ATCTTGTTTTCTGAATTCACGATGCAGGCGCCGACCTGGGAATTTGGATCTTTGGAAACTTCACTCATGTaGGGTCACGGAGAAATCTTG +
Preference number: 5 (lower is better)
Translates to: ILFSEFTMQAPTWEFGSLETSLM*GHGEIL
Trigger: CAAGATTTCTCCGTGACCCAACATGAGTGAAGTTTC...CAAAGATCCAAATTCCCAGGTCGGCGCCTGCATCGTGAATTCAGAAAACAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CAA 90 bp AAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTTCCCACGGAGAAATCTaGAGAAAGGCGAGGAATGTG +
Preference number: 5 (lower is better)
Translates to: KILWPFQIVVPFLAGNFTSHGEI*RKARNV
Trigger: CACATTCCTCGCCTTTCTCAAGATTTCTCCGTGGGA...AGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509218.5
CDS-3UTR CAA 90 bp TTCAAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGCGCCGACCTGGGAATTaGGATCTTTGCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: FKMKGISNLLEDDNPNLLRRPGN*DLCFSV
Trigger: CACAGAGAAGCAAAGATCCAAATTCCCAGGTCGGCG...CAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCATCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CAA 90 bp CACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAAACACCAATCCCGACAATCTaGTTTTCTGAATTCACGATG +
Preference number: 5 (lower is better)
Translates to: HQATTGSPILNPKAIVQTPIPTI*FSEFTM
Trigger: CATCGTGAATTCAGAAAACAAGATTGTCGGGATTGG...TGTTTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CAA 90 bp ATGGAGGAAATATTCCTGGTTCAGTTACACTCCTCGTCTGTCAGGACAGATGTGCCAATCCCGACAATCTaGTTTTCTGAATTCACGATG +
Preference number: 5 (lower is better)
Translates to: MEEIFLVQLHSSSVRTDVPIPTI*FSEFTM
Trigger: CATCGTGAATTCAGAAAACAAGATTGTCGGGATTGG...CACATCTGTCCTGACAGACGAGGAGTGTAACTGAACCAGGAATATTTCCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000507543.5
CDS-3UTR CAA 90 bp CACAGCCATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGACCAATCCCGACAATCTaGTTTTCTGAATTCACGATG +
Preference number: 5 (lower is better)
Translates to: HSHKILWPFQIVVPFLAGPIPTI*FSEFTM
Trigger: CATCGTGAATTCAGAAAACAAGATTGTCGGGATTGG...TCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATGGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CAA 90 bp CATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCTATGCCATGCTTCACTaGGGCCAGATGTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: HKILWPFQIVVPFLAGNFYAMLH*GQMFRS
Trigger: TGATCTGAACATCTGGCCCAAGTGAAGCATGGCATA...GAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CAA 90 bp GTGCACCAGGCCACCACAGGCTCCCCTATTTTAAACCCTAAAGCAATAGTTCAACAATGCTACTGTCATTaGAGGCCTAATTTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: VHQATTGSPILNPKAIVQQCYCH*RPNFLP
Trigger: TGGAAGAAAATTAGGCCTCAAATGACAGTAGCATTG...TTGAACTATTGCTTTAGGGTTTAAAATAGGGGAGCCTGTGGTGGCCTGGTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp ATGAGCTTAGCGCATTCATTACAAGGGAACAAGGCAACATACATACTACAGCCTTGGCACACTGGGAATTaGGATCTTTGCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: MSLAHSLQGNKATYILQPWHTGN*DLCFSV
Trigger: CACAGAGAAGCAAAGATCCAAATTCCCAGTGTGCCA...AGGCTGTAGTATGTATGTTGCCTTGTTCCCTTGTAATGAATGCGCTAAGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507631.5
CDS-3UTR CAA 90 bp CTGCACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAAGAAACTTCACTCATGTaGGGTCTACTAAATAGGAGG +
Preference number: 5 (lower is better)
Translates to: LHPFGIPLYPIPTILFSEETSLM*GLLNRR
Trigger: CCTCCTATTTAGTAGACCCAACATGAGTGAAGTTTC...TTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS TCA 90 bp CAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGTTCATaGTGGCATTCAGCTCCGCATGGCACACTGGGAATTTGGATCTTT +
Preference number: 5 (lower is better)
Translates to: QHTYYSLSHRSNFCS*WHSAPHGTLGIWIF
Trigger: AAAGATCCAAATTCCCAGTGTGCCATGCGGAGCTGAATGCCATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507631.5
CDS-3UTR CAA 90 bp CACCCATTTGGCATCCCATTGTACCCAATCCCGACAATCTTGTTTTCTGAATTCCCAATCCCGACAATCTaGTTTTCTGAATTCACGATG +
Preference number: 5 (lower is better)
Translates to: HPFGIPLYPIPTILFSEFPIPTI*FSEFTM
Trigger: CATCGTGAATTCAGAAAACAAGATTGTCGGGATTGG...GAATTCAGAAAACAAGATTGTCGGGATTGGGTACAATGGGATGCCAAATGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507543.5
ENST00000509218.5
ENST00000509757.5
ENST00000513348.5
CDS-3UTR CAA 90 bp GGAACAACTCATTATTCAGCTAAACGAAATGGAAGAGCTCCATGTGACCAACAATATGCCATGCTTCACTaGGGCCAGATGTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: GTTHYSAKRNGRAPCDQQYAMLH*GQMFRS
Trigger: TGATCTGAACATCTGGCCCAAGTGAAGCATGGCATA...TTGTTGGTCACATGGAGCTCTTCCATTTCGTTTAGCTGAATAATGAGTTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
CDS-3UTR CAA 90 bp AAGGCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGTTCATGATGCACACGTACGGGTATTaGGTGTCCAGCTTATTCTCT +
Preference number: 5 (lower is better)
Translates to: KATYILQPFTSVEFLFMMHTYGY*VSSLFS
Trigger: AGAGAATAAGCTGGACACCAAATACCCGTACGTGTG...CATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CAA 90 bp CATAAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACATCGGTCGAATTTTaGTTCATGATGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: HKILWPFQIVVPFLAGNFTSVEF*FMMAFS
Trigger: GCTGAATGCCATCATGAACAAAAATTCGACCGATGT...GAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CAA 90 bp ATGAGCTTAGCGCATTCATTACAAGGGAACAAGGCAACATACATACTACAGCCTACATCGGTCGAATTTTaGTTCATGATGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: MSLAHSLQGNKATYILQPTSVEF*FMMAFS
Trigger: GCTGAATGCCATCATGAACAAAAATTCGACCGATGT...AGGCTGTAGTATGTATGTTGCCTTGTTCCCTTGTAATGAATGCGCTAAGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CAA 90 bp CAAGGGAACAAGGCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTTGAACTCACTGAAGCTTTaGACTCGGTCTGCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: QGNKATYILQPFTSVEFLNSLKL*TRSAVN
Trigger: ATTAACAGCAGACCGAGTCAAAAGCTTCAGTGAGTT...CAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGCCTTGTTCCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CAA 90 bp AAAATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTGCAGGAAACTTCACTAAGTCAATGACAATCTaGCTGCACTTCGGTATGAAT +
Preference number: 5 (lower is better)
Translates to: KILWPFQIVVPFLAGNFTKSMTI*LHFGMN
Trigger: ATTCATACCGAAGTGCAGCAAGATTGTCATTGACTT...AGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507543.5
CDS-3UTR CAA 90 bp ATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGATTAACTCACTGAAGCTTTaGACTCGGTCTGCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: MKGISNLLEDDNPNLLEINSLKL*TRSAVN
Trigger: ATTAACAGCAGACCGAGTCAAAAGCTTCAGTGAGTT...AATCTCCAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CAA 90 bp AAGATGAAAGGCATTAGCAACCTCTTAGAAGACGATAATCCCAATCTTCTGGAGTTTAGATGCCTACTTTaGCCATACTGGCTAGTAAGA +
Preference number: 5 (lower is better)
Translates to: KMKGISNLLEDDNPNLLEFRCLL*PYWLVR
Trigger: TCTTACTAGCCAGTATGGCAAAAGTAGGCATCTAAA...CTCCAGAAGATTGGGATTATCGTCTTCTAAGAGGTTGCTAATGCCTTTCATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
ENST00000507543.5
ENST00000507631.5
CDS-3UTR CAA 90 bp TTGGTAAGGAGCCAAATTACAGAATACCCTAGAATGTGGAATACAAAATCTCAGCAATGCTACTGTCATTaGAGGCCTAATTTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: LVRSQITEYPRMWNTKSQQCYCH*RPNFLP
Trigger: TGGAAGAAAATTAGGCCTCAAATGACAGTAGCATTG...CTGAGATTTTGTATTCCACATTCTAGGGTATTCTGTAATTTGGCTCCTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357067.7
ENST00000438320.7
ENST00000500813.6
CDS GCA 72 bp GCCCAGCATCCGGTGCCGGCTCCGCGCGCAGGCCGGTaGTCGTCCCCGCCGCCGCCGTGCTCAGGGAAGGAA +
Preference number: 6 (lower is better)
Translates to: AQHPVPAPRAGR*SSPPPPCSGKE
Trigger: TTCCTTCCCTGAGCACGGCGGCGGCGGGGACGAGCACCGGCCTGCGCGCGGAGCCGGCACCGGATGCTGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509218.5
ENST00000509757.5
CDS GCA 72 bp CAGTGCCATCCGGTGCCGGCTCCGCGCGCAGGCCGGTaGTCGTCCCCGCCGCCGCCGTGCTCAGGGAAGGAA +
Preference number: 6 (lower is better)
Translates to: QCHPVPAPRAGR*SSPPPPCSGKE
Trigger: TTCCTTCCCTGAGCACGGCGGCGGCGGGGACGAGCACCGGCCTGCGCGCGGAGCCGGCACCGGATGGCACTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508994.1
CDS GCA 72 bp TTGGGTCATCCGGTGCCGGCTCCGCGCGCAGGCCGGTaGTCGTCCCCGCCGCCGCCGTGCTCAGGGAAGGAA +
Preference number: 6 (lower is better)
Translates to: LGHPVPAPRAGR*SSPPPPCSGKE
Trigger: TTCCTTCCCTGAGCACGGCGGCGGCGGGGACGAGCACCGGCCTGCGCGCGGAGCCGGCACCGGATGACCCAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438320.7
ENST00000507631.5
CDS TCA 72 bp AGGCACACCCCACGCCGCTCGCAACCCCGTCAGCTCTaGTCCAGGGCCTACACCCGGCATTCCCAACCCACA +
Preference number: 6 (lower is better)
Translates to: RHTPRRSQPRQL*SRAYTRHSQPT
Trigger: TGTGGGTTGGGAATGCCGGGTGTAGGCCCTGGATCAGAGCTGACGGGGTTGCGAGCGGCGTGGGGTGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503820.5
ENST00000503988.1
CDS CCA 72 bp GCATTCCCAACCCACACACGGGCGCAGGAAGGGATGTaGTGTTCAGACGCCCAGCACCACCTCCCGGGGCAC +
Preference number: 6 (lower is better)
Translates to: AFPTHTRAQEGM*CSDAQHHLPGH
Trigger: GTGCCCCGGGAGGTGGTGCTGGGCGTCTGAACACCACATCCCTTCCTGCGCCCGTGTGTGGGTTGGGAATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503820.5
ENST00000503988.1
CDS CCA 72 bp CAGTGCAGGGCGGCAGTGCCTAAGACAAGGATGCAGTaGAGAGTGGGTGCTGGGAACCACGGTCACCCACTG +
Preference number: 6 (lower is better)
Translates to: QCRAAVPKTRMQ*RVGAGNHGHPL
Trigger: CAGTGGGTGACCGTGGTTCCCAGCACCCACTCTCCACTGCATCCTTGTCTTAGGCACTGCCGCCCTGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514754.5
CDS TCA 72 bp AGTGGAGAGTGGGTGCTGGGAACCACGGTCACCCACTaGTTACGCTGCCCCACATCTGAGAGGCCTGGCAAC +
Preference number: 6 (lower is better)
Translates to: SGEWVLGTTVTH*LRCPTSERPGN
Trigger: GTTGCCAGGCCTCTCAGATGTGGGGCAGCGTAATCAGTGGGTGACCGTGGTTCCCAGCACCCACTCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514754.5
CDS GCA 72 bp TGCTACAGTGCAGGGCGGCAGTGCCTAAGACAAGGATaGAGTGGAGAGTGGGTGCTGGGAACCACGGTCACC +
Preference number: 6 (lower is better)
Translates to: CYSAGRQCLRQG*SGEWVLGTTVT
Trigger: GGTGACCGTGGTTCCCAGCACCCACTCTCCACTGCATCCTTGTCTTAGGCACTGCCGCCCTGCACTGTAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514754.5
CDS GCA 72 bp TTCAGGCTCCACACTTTATTTAGGCATCTGCTACAGTaGAGGGCGGCAGTGCCATCCGGTGCCGGCTCCGCG +
Preference number: 6 (lower is better)
Translates to: FRLHTLFRHLLQ*RAAVPSGAGSA
Trigger: CGCGGAGCCGGCACCGGATGGCACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508994.1
CDS CCA 72 bp GGAAACTTCACTCATGTTGGGTCTGGTTTGGGTCTCTaGAGTGAGCCCGCTGTGTCGCAGCGTCCCCGTGGG +
Preference number: 6 (lower is better)
Translates to: GNFTHVGSGLGL*SEPAVSQRPRG
Trigger: CCCACGGGGACGCTGCGACACAGCGGGCTCACTCCAGAGACCCAAACCAGACCCAACATGAGTGAAGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503182.5
CDS TCA 72 bp AAATGTTACAGTGAGCCACGCATGTGGCTTTCTGCATaGTGCCGGACACAGGCCACCCCTCCCCGAGCTCCT +
Preference number: 6 (lower is better)
Translates to: KCYSEPRMWLSA*CRTQATPPRAP
Trigger: AGGAGCTCGGGGAGGGGTGGCCTGTGTCCGGCATCATGCAGAAAGCCACATGCGTGGCTCACTGTAACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513383.5
CDS GCA 72 bp ACTTCTGCTTCAGGCTCCACACTTTATTTAGGCATCTaGTACAGTGCAGGGCGGCAGTGCCATCCGGTGCCG +
Preference number: 6 (lower is better)
Translates to: TSASGSTLYLGI*YSAGRQCHPVP
Trigger: CGGCACCGGATGGCACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508994.1
CDS GCA 72 bp CTTTATTTAGGCATCTGCTACAGTGCAGGGCGGCAGTaGCTAAGACAAGGATGCAGTGGAGAGTGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: LYLGICYSAGRQ*LRQGCSGEWVL
Trigger: CAGCACCCACTCTCCACTGCATCCTTGTCTTAGGCACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514754.5
CDS TCA 72 bp CAGTCCACTGCACTCCCCTTTGAAGAAATGTTACAGTaGGCCACGCATGTGGCTTTCTGCATGATGCCGGAC +
Preference number: 6 (lower is better)
Translates to: QSTALPFEEMLQ*ATHVAFCMMPD
Trigger: GTCCGGCATCATGCAGAAAGCCACATGCGTGGCTCACTGTAACATTTCTTCAAAGGGGAGTGCAGTGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513383.5
CDS GCA 72 bp TTCAGGCTCCACACTTTATTTAGGCATCTGCTACAGTaGAGGGCGGCAGTGCCTAAGACAAGGATGCAGTGG +
Preference number: 6 (lower is better)
Translates to: FRLHTLFRHLLQ*RAAVPKTRMQW
Trigger: CCACTGCATCCTTGTCTTAGGCACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514754.5
CDS CCA 72 bp AGTCGTCCCGTTTCTTGCAGGAAACTTCACTCATGTTaGGTCTGTCTCCCAGGGGCAAGCAGAGACTGTCTA +
Preference number: 6 (lower is better)
Translates to: SRPVSCRKLHSC*VCLPGASRDCL
Trigger: TAGACAGTCTCTGCTTGCCCCTGGGAGACAGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503988.1
CDS GCA 72 bp ACTTCTGCTTCAGGCTCCACACTTTATTTAGGCATCTaGTACAGTGCAGGGCGGCAGTGCCTAAGACAAGGA +
Preference number: 6 (lower is better)
Translates to: TSASGSTLYLGI*YSAGRQCLRQG
Trigger: TCCTTGTCTTAGGCACTGCCGCCCTGCACTGTAGCAGATGCCTAAATAAAGTGTGGAGCCTGAAGCAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514754.5
CDS GCA 72 bp AATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGTTGGGTCCGCACGGCT +
Preference number: 6 (lower is better)
Translates to: NTLAIPNSRPVS*RKLHSCWVRTA
Trigger: AGCCGTGCGGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357067.7
ENST00000500813.6
CDS GCA 72 bp AATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGTTGGGTCATCCGGTGC +
Preference number: 6 (lower is better)
Translates to: NTLAIPNSRPVS*RKLHSCWVIRC
Trigger: GCACCGGATGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438320.7
ENST00000507631.5
CDS GCA 72 bp AATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGTTGGGTCAGGGGCAAG +
Preference number: 6 (lower is better)
Translates to: NTLAIPNSRPVS*RKLHSCWVRGK
Trigger: CTTGCCCCTGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514754.5
CDS GCA 72 bp ATCAACGTACGGGTATTTGGTGTCCAGCTTATTCTCTaGTGTCCTTCTCCAAGGCAACACGTCATCACTGCA +
Preference number: 6 (lower is better)
Translates to: INVRVFGVQLIL*CPSPRQHVITA
Trigger: TGCAGTGATGACGTGTTGCCTTGGAGAAGGACAGCAGAGAATAAGCTGGACACCAAATACCCGTACGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513383.5
CDS GCA 72 bp AATACTCTGGCCATTCCAAATAGTCGTCCCGTTTCTTaGAGGAAACTTCACTCATGTTGGGTCTGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: NTLAIPNSRPVS*RKLHSCWVWFG
Trigger: CCCAAACCAGACCCAACATGAGTGAAGTTTCCTGCAAGAAACGGGACGACTATTTGGAATGGCCAGAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503182.5
CDS TCA 72 bp TACTACAGCCTTTCACATCGGTCGAATTTTTGTTCATaGTGGCATTCAGCTCCGCATGGCACACTGGGAATT +
Preference number: 6 (lower is better)
Translates to: YYSLSHRSNFCS*WHSAPHGTLGI
Trigger: AATTCCCAGTGTGCCATGCGGAGCTGAATGCCATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507631.5
CDS CAA 90 bp AACAAGGCAACATACATACTACAGCCTTTCACATCGGTCGAATTTTaGTTCATGATGGCATTCAGCTCCGCATGGCACACTGGGAATTTG +
Preference number: 6 (lower is better)
Translates to: NKATYILQPFTSVEF*FMMAFSSAWHTGNL
Trigger: CAAATTCCCAGTGTGCCATGCGGAGCTGAATGCCATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGTTGCCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507631.5
CDS CAA 72 bp ACATACATACTACAGCCTTTCACATCGGTCGAATTTTaGTTCATGATGGCATTCAGCTCCGCATGGCACACT +
Preference number: 6 (lower is better)
Translates to: TYILQPFTSVEF*FMMAFSSAWHT
Trigger: AGTGTGCCATGCGGAGCTGAATGCCATCATGAACAAAAATTCGACCGATGTGAAAGGCTGTAGTATGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500813.6
ENST00000507631.5