RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCT (Homo sapiens)

Ensembl gene IDs: ENSG00000080166

Ensembl transcript IDs: ENST00000377028.10, ENST00000446125.1, ENST00000472871.1, ENST00000483392.6, ENST00000490854.1

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGAAGCAGCCACCTGCTTCCACCCCAGGATTAGTCACTAAACTGTaGGGAATATCAAAAGTAACTTCACCTGAGGAAAGGCTGGCTCTC +
Preference number: 1 (lower is better)
Translates to: LKQPPASTPGLVTKL*GISKVTSPEERLAL
Trigger: GAGAGCCAGCCTTTCCTCAGGTGAAGTTACTTTTGATATTCCCCACAGTTTAGTGACTAATCCTGGGGTGGAAGCAGGTGGCTGCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR TCA 90 bp CACCTCCATGGCATTACCAATAAAGACACTGGGGCTAAGAAAGATTaGTGTATGGTCTTGGCCAGGTCTCACATTGCACTGACCTGCAAA +
Preference number: 1 (lower is better)
Translates to: HLHGITNKDTGAKKD*CMVLARSHIALTCK
Trigger: TTTGCAGGTCAGTGCAATGTGAGACCTGGCCAAGACCATACATCAATCTTTCTTAGCCCCAGTGTCTTTATTGGTAATGCCATGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR GCA 90 bp CTTTACCGGGCTATCTTGATCTTCACCACTGAGCCTGCTCTCAGATaGACCTGTAGCTTTATGAGATTCAAATTCAGTTCCAACTGGGCT +
Preference number: 1 (lower is better)
Translates to: LYRAILIFTTEPALR*TCSFMRFKFSSNWA
Trigger: AGCCCAGTTGGAACTGAATTTGAATCTCATAAAGCTACAGGTGCATCTGAGAGCAGGCTCAGTGGTGAAGATCAAGATAGCCCGGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR TCA 90 bp CGCCCTAGAACTTCAGTCTCACTCCTGATGCACAGAAACCAGATATaGGCAGATGAAATTTGCCTGGAAATCTCAAGAGCCATTAACTTC +
Preference number: 1 (lower is better)
Translates to: RPRTSVSLLMHRNQI*ADEICLEISRAINF
Trigger: GAAGTTAATGGCTCTTGAGATTTCCAGGCAAATTTCATCTGCTCATATCTGGTTTCTGTGCATCAGGAGTGAGACTGAAGTTCTAGGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR TCA 90 bp TATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTaGGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGC +
Preference number: 1 (lower is better)
Translates to: YRRTYVKDLQLKKEQ*GLVPLLSASELWLG
Trigger: GCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
3UTR TCA 90 bp ACTATAGAAATAGGAAGAGCTTCAACCTTAGAGTCTCCAACAAATTaGCCCATCTTGAAGGCTTATCTGGGAGATCACCAAGTTAGCTAC +
Preference number: 1 (lower is better)
Translates to: TIEIGRASTLESPTN*PILKAYLGDHQVSY
Trigger: GTAGCTAACTTGGTGATCTCCCAGATAAGCCTTCAAGATGGGTCAATTTGTTGGAGACTCTAAGGTTGAAGCTCTTCCTATTTCTATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR CAA 90 bp GAGGATCAGCCAAAGAGACCTCAGAGTAATGGGACTCAAGTCAAATaGTCTCATGTTCAGGTTTACAGCCTCACCAGCCTTCAGTCAGCC +
Preference number: 2 (lower is better)
Translates to: EDQPKRPQSNGTQVK*SHVQVYSLTSLQSA
Trigger: GGCTGACTGAAGGCTGGTGAGGCTGTAAACCTGAACATGAGACAATTTGACTTGAGTCCCATTACTCTGAGGTCTCTTTGGCTGATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR-3UTR TCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTATAGGGGCCAGCTCCTaGGGCCAGGCATCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVIGASS*GQASAG
Trigger: TCCTGCAGATGCCTGGCCTCAGGAGCTGGCCCCTAT...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483392.6
3UTR-3UTR CCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTCAGCGTCAGAACTGTaGCTTGGCCAGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGSASEL*LGQPLL
Trigger: GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGA...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
3UTR-3UTR CCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCTCAGCGTCAGAACTGTaGCTTGGCCAGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: VKQASKAETTAKHLLNEISASEL*LGQPLL
Trigger: GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGA...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
3UTR-3UTR TCA 90 bp AAAGCCACCAGTGTTCCCATGACTACTAAGAGAGTTGTGGGCCAACCTGGAGTTCAGCTAAGCATCTTCTaGATGAGATCATCATCACTA +
Preference number: 2 (lower is better)
Translates to: KATSVPMTTKRVVGQPGVQLSIF*MRSSSL
Trigger: TAGTGATGATGATCTCATTCAGAAGATGCTTAGCTG...AACTCCAGGTTGGCCCACAACTCTCTTAGTAGTCATGGGAACACTGGTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483392.6
3UTR-3UTR CCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCGTCAGAACTGTGGCTTaGCCAGCCTCTTCTCTTAGG +
Preference number: 2 (lower is better)
Translates to: KQASKAETTAKHLLNEIIVRTVA*PASSLR
Trigger: CCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGAC...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
3UTR-3UTR CCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTTCAGCGTCAGAACTGTaGCTTGGCCAGCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVSASEL*LGQPLL
Trigger: GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGA...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
3UTR CAA 90 bp TGCACCTGTAGCTTTATGAGATTCAAATTCAGTTCCAACTGGGCTTaGTCCATTTCTCTGGCTTTAGCAGTCCTTTTGCATGGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: CTCSFMRFKFSSNWA*SISLALAVLLHGVN
Trigger: GTTTACCCCATGCAAAAGGACTGCTAAAGCCAGAGAAATGGACAAAGCCCAGTTGGAACTGAATTTGAATCTCATAAAGCTACAGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR-3UTR TCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTTGTACATCCGATTGTaGCCAATAGGGGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSLYIRL*PIGASS
Trigger: GGAGCTGGCCCCTATTGGTCACAATCGGATGTACAA...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483392.6
3UTR-3UTR CCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGTCAGAACTGTGGCTTaGCCAGCCTCTTCTCTTAGG +
Preference number: 2 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVVRTVA*PASSLR
Trigger: CCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGAC...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
3UTR-3UTR TCA 90 bp ATGAAATTTGCCTGGAAATCTCAAGAGCCATTAACTTCTCTGAAGTGGGGTCCACAGCTAAGCATCTTCTaGATGAGATCATCATCACTA +
Preference number: 2 (lower is better)
Translates to: MKFAWKSQEPLTSLKWGPQLSIF*MRSSSL
Trigger: TAGTGATGATGATCTCATTCAGAAGATGCTTAGCTG...TGGACCCCACTTCAGAGAAGTTAATGGCTCTTGAGATTTCCAGGCAAATTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR-3UTR TCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGCATCAGTAAAGGAATaGAGAACCAGGAATACTCTT +
Preference number: 2 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVASVKE*RTRNTL
Trigger: AAGAGTATTCCTGGTTCTTCATTCCTTTACTGATGC...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483392.6
3UTR-3UTR CCA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGTTCTTCATTAGTCACTaGAGGGAAGAAAGGAACCAT +
Preference number: 2 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSEFFISH*REERNH
Trigger: ATGGTTCCTTTCTTCCCTCCAGTGACTAATGAAGAA...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483392.6
3UTR-3UTR CAA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTGGATTAGTTCCTTTATaGTCAGCGTCAGAACTGTGG +
Preference number: 3 (lower is better)
Translates to: VRISSFIVSVRTVAWPASGLVPL*SASELW
Trigger: CCACAGTTCTGACGCTGACAATAAAGGAACTAATCC...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
3UTR-3UTR CAA 90 bp TGGTTCTTGATGAGTCTTGCACCCTCTAGGACCCCTTATGTTGAAGGCAGCTCCTACCTAGTAAAGAAATaGGTAGAGGATCAGCCAAAG +
Preference number: 3 (lower is better)
Translates to: WFLMSLAPSRTPYVEGSSYLVKK*VEDQPK
Trigger: CTTTGGCTGATCCTCTACCAATTTCTTTACTAGGTA...GGAGCTGCCTTCAACATAAGGGGTCCTAGAGGGTGCAAGACTCATCAAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR TCA 72 bp CCACTGAGCCTGCTCTCAGATGCACCTGTAGCTTTATaGGATTCAAATTCAGTTCCAACTGGGCTTTGTCCA +
Preference number: 3 (lower is better)
Translates to: PLSLLSDAPVAL*DSNSVPTGLCP
Trigger: TGGACAAAGCCCAGTTGGAACTGAATTTGAATCTCATAAAGCTACAGGTGCATCTGAGAGCAGGCTCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR CCA 72 bp CCACCTGCTTCCACCCCAGGATTAGTCACTAAACTGTaGGGAATATCAAAAGTAACTTCACCTGAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: PPASTPGLVTKL*GISKVTSPEER
Trigger: CCTTTCCTCAGGTGAAGTTACTTTTGATATTCCCCACAGTTTAGTGACTAATCCTGGGGTGGAAGCAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR TCA 72 bp GGCATTACCAATAAAGACACTGGGGCTAAGAAAGATTaGTGTATGGTCTTGGCCAGGTCTCACATTGCACTG +
Preference number: 3 (lower is better)
Translates to: GITNKDTGAKKD*CMVLARSHIAL
Trigger: CAGTGCAATGTGAGACCTGGCCAAGACCATACATCAATCTTTCTTAGCCCCAGTGTCTTTATTGGTAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR-3UTR CAA 90 bp AGGACCCCTTATGTTGAAGGCAGCTCCAGGGACCTCTTAACACCCATTCTTTACCTGAATTGTCATGTTTaGTACAGATGGTTTGCTTTC +
Preference number: 3 (lower is better)
Translates to: RTPYVEGSSRDLLTPILYLNCHV*YRWFAF
Trigger: GAAAGCAAACCATCTGTACAAAACATGACAATTCAG...GTAAAGAATGGGTGTTAAGAGGTCCCTGGAGCTGCCTTCAACATAAGGGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR TCA 72 bp ACTTCAGTCTCACTCCTGATGCACAGAAACCAGATATaGGCAGATGAAATTTGCCTGGAAATCTCAAGAGCC +
Preference number: 3 (lower is better)
Translates to: TSVSLLMHRNQI*ADEICLEISRA
Trigger: GGCTCTTGAGATTTCCAGGCAAATTTCATCTGCTCATATCTGGTTTCTGTGCATCAGGAGTGAGACTGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR GCA 72 bp GCTATCTTGATCTTCACCACTGAGCCTGCTCTCAGATaGACCTGTAGCTTTATGAGATTCAAATTCAGTTCC +
Preference number: 3 (lower is better)
Translates to: AILIFTTEPALR*TCSFMRFKFSS
Trigger: GGAACTGAATTTGAATCTCATAAAGCTACAGGTGCATCTGAGAGCAGGCTCAGTGGTGAAGATCAAGATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR GCA 72 bp CATGAGCACCCTAGGCTTCTTCTGTGTATCTCTTGCTaGTTAAATGTGTCTCCATTAGGGGTGTATATCCTT +
Preference number: 3 (lower is better)
Translates to: HEHPRLLLCISC*LNVSPLGVYIL
Trigger: AAGGATATACACCCCTAATGGAGACACATTTAAGCAGCAAGAGATACACAGAAGAAGCCTAGGGTGCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483392.6
3UTR TCA 72 bp ATAGGAAGAGCTTCAACCTTAGAGTCTCCAACAAATTaGCCCATCTTGAAGGCTTATCTGGGAGATCACCAA +
Preference number: 3 (lower is better)
Translates to: IGRASTLESPTN*PILKAYLGDHQ
Trigger: TTGGTGATCTCCCAGATAAGCCTTCAAGATGGGTCAATTTGTTGGAGACTCTAAGGTTGAAGCTCTTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR-3UTR CAA 90 bp TTCTCTGAAGTGGGGTCCATCATGATAAGTCTGAACATCGTAGTAAAGATTGTCGGGACTCAAGTCAAATaGTCTCATGTTCAGGTTTAC +
Preference number: 3 (lower is better)
Translates to: FSEVGSIMISLNIVVKIVGTQVK*SHVQVY
Trigger: GTAAACCTGAACATGAGACAATTTGACTTGAGTCCC...GACAATCTTTACTACGATGTTCAGACTTATCATGATGGACCCCACTTCAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
3UTR-3UTR CAA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCTCTTCTGTGTATCTCTaGCTGCTTAAATGTGTCTCC +
Preference number: 3 (lower is better)
Translates to: KQASKAETTAKHLLNEIISSVYL*LLKCVS
Trigger: GGAGACACATTTAAGCAGCAAGAGATACACAGAAGA...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR TCA 90 bp AGGACCCCTTATGTTGAAGGCAGCTCCAGGGACCTCTTAACACCCATTCTTTACTGCCCCCGGCCTTGCTaGGAGCCACAGACATTGGCC +
Preference number: 4 (lower is better)
Translates to: RTPYVEGSSRDLLTPILYCPRPC*EPQTLA
Trigger: GGCCAATGTCTGTGGCTCTCAGCAAGGCCGGGGGCA...GTAAAGAATGGGTGTTAAGAGGTCCCTGGAGCTGCCTTCAACATAAGGGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTGCCCCCGGCCTTGCTaGGAGCCACAGACATTGGCC +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLCPRPC*EPQTLA
Trigger: GGCCAATGTCTGTGGCTCTCAGCAAGGCCGGGGGCA...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTGGCTGTCCACCGTCATaGAGACTCGGGGGAACTGAC +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGGCPPS*RLGGTD
Trigger: GTCAGTTCCCCCGAGTCTGCATGACGGTGGACAGCC...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCGAGAGCCACAGACATTaGCCGACTCTGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLESHRH*PTLHPG
Trigger: GCCTGGGTGCAGAGTCGGCCAATGTCTGTGGCTCTC...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR TCA 90 bp TGGTTCTTGATGAGTCTTGCACCCTCTAGGACCCCTTATGTTGAAGGCAGCTCCTGCAGCCCAAGCAACTaGGCAGAAACCCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: WFLMSLAPSRTPYVEGSSCSPSN*AETPTK
Trigger: TTTGGTGGGGGTTTCTGCTCAGTTGCTTGGGCTGCA...GGAGCTGCCTTCAACATAAGGGGTCCTAGAGGGTGCAAGACTCATCAAGAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTGGCAAACTGCGGCTaGGTTCCATTGGGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLLANCG*VPLGPS
Trigger: GCTTGGGCCCAATGGAACCCAGCCGCAGTTTGCCAA...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTCAGAGTCGGATCGTCTaGTCTCGCTGCCCCAAACAG +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGQSRIV*SRCPKQ
Trigger: CTGTTTGGGGCAGCGAGACCAGACGATCCGACTCTG...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp TGGTTCTTGATGAGTCTTGCACCCTCTAGGACCCCTTATGTTGAAGGCAGCTCCGGGATCATTGGCGGCTaGATGTGGCAAAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: WFLMSLAPSRTPYVEGSSGIIGG*MWQSVC
Trigger: ACAAACGCTTTGCCACATTCAGCCGCCAATGATCCC...GGAGCTGCCTTCAACATAAGGGGTCCTAGAGGGTGCAAGACTCATCAAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR GCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCCGGCTCGCACCTCTGTaGACTGCCCCCGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEIRLAPL*TAPGLA
Trigger: AGCAAGGCCGGGGGCAGTGCACAGAGGTGCGAGCCG...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp TTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTAAGGCAATCGTCTGGTCTCGCTaGCCCAAACAGCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLSASELWLGQPLLLGKAIVWSR*PKQLVC
Trigger: ACAGACCAGCTGTTTGGGGCAGCGAGACCAGACGAT...TGCCTTACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTATCGTCTGGTCTCGCTaGCCCAAACAGCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGIVWSR*PKQLVC
Trigger: ACAGACCAGCTGTTTGGGGCAGCGAGACCAGACGAT...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp TTCTCTGAAGTGGGGTCCATCATGATAAGTCTGAACATCGTAGTAAAGATTGTCGCGGCTGGGTTCCATTaGGCCCAAGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: FSEVGSIMISLNIVVKIVAAGFH*AQAGPA
Trigger: GGCTGGGCCTGCTTGGGCCCAATGGAACCCAGCCGC...GACAATCTTTACTACGATGTTCAGACTTATCATGATGGACCCCACTTCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTCAGCGTCAGAACTGTaGCTTGGCCAGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLSASEL*LGQPLL
Trigger: GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGA...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp ACAGTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCGGGATCATTGGCGGCTaGATGTGGCAAAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: TVRISSFIVSVRTVAWPAGIIGG*MWQSVC
Trigger: ACAAACGCTTTGCCACATTCAGCCGCCAATGATCCC...GGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp TTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTTGTTAAACAAGCAAGCATAGGGGCCAGCTCCTaGGGCCAGGCATCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LKVEVASSTLVGFVKQASIGASS*GQASAG
Trigger: TCCTGCAGATGCCTGGCCTCAGGAGCTGGCCCCTAT...GCTTGCTTGTTTAACAAACCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGATAGGGGCCAGCTCCTaGGGCCAGGCATCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGIGASS*GQASAG
Trigger: TCCTGCAGATGCCTGGCCTCAGGAGCTGGCCCCTAT...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTGTACATCCGATTGTaGCCAATAGGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLLYIRL*PIGASS
Trigger: GGAGCTGGCCCCTATTGGTCACAATCGGATGTACAA...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTTTGTACATCCGATTGTaGCCAATAGGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGLYIRL*PIGASS
Trigger: GGAGCTGGCCCCTATTGGTCACAATCGGATGTACAA...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp AGGACCCCTTATGTTGAAGGCAGCTCCAGGGACCTCTTAACACCCATTCTTTACCTTGATCTTCACCACTaGGCCTGCTCTCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: RTPYVEGSSRDLLTPILYLDLHH*ACSQMH
Trigger: GTGCATCTGAGAGCAGGCTCAGTGGTGAAGATCAAG...GTAAAGAATGGGTGTTAAGAGGTCCCTGGAGCTGCCTTCAACATAAGGGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR GCA 90 bp ATGAAATTTGCCTGGAAATCTCAAGAGCCATTAACTTCTCTGAAGTGGGGTCCAGACATTGGCCGACTCTaGACCCAGGCGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MKFAWKSQEPLTSLKWGPDIGRL*TQAWAA
Trigger: TGCTGCCCACGCCTGGGTGCAGAGTCGGCCAATGTC...TGGACCCCACTTCAGAGAAGTTAATGGCTCTTGAGATTTCCAGGCAAATTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CCA 90 bp TTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTAAGGCACTGCCGAATCACTGGTaGTTTCTTCCGCTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: LLSASELWLGQPLLLGKALPNHW*FLPLAV
Trigger: AACTGCGAGCGGAAGAAACCACCAGTGATTCGGCAG...TGCCTTACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTCTGCCGAATCACTGGTaGTTTCTTCCGCTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGLPNHW*FLPLAV
Trigger: AACTGCGAGCGGAAGAAACCACCAGTGATTCGGCAG...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCGTTCTGCCGAATCACTaGTGGTTTCTTCCGCTCGCA +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLVLPNH*WFLPLA
Trigger: TGCGAGCGGAAGAAACCACCAGTGATTCGGCAGAAC...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp CTTCAACTGAAACTGGCAGATCGATGGCATAGCTGTAGCCAAGTTGGTCTGAGGACTCGTTCCTCCCAGTaGCAAAGTTCCAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LQLKLADRWHSCSQVGLRTRSSQ*QSSSRA
Trigger: TGCCCTACTGGAACTTTGCCACTGGGAGGAACGAGT...CCTCAGACCAACTTGGCTACAGCTATGCCATCGATCTGCCAGTTTCAGTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR CCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTGCTGCCCCAAACAGCTaGTCTGTACACACATCACAC +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGAAPNS*SVHTSH
Trigger: GTGTGATGTGTGTACAGACCAGCTGTTTGGGGCAGC...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp TGGTTCTTGATGAGTCTTGCACCCTCTAGGACCCCTTATGTTGAAGGCAGCTCCCCAGCTGGAGAATCTTaGGTTCCGACTAATCAGAGT +
Preference number: 4 (lower is better)
Translates to: WFLMSLAPSRTPYVEGSSPAGES*VPTNQS
Trigger: ACTCTGATTAGTCGGAACTCAAGATTCTCCAGCTGG...GGAGCTGCCTTCAACATAAGGGGTCCTAGAGGGTGCAAGACTCATCAAGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGATAGGGGCCAGCTCCTaGGGCCAGGCATCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWIGASS*GQASAG
Trigger: TCCTGCAGATGCCTGGCCTCAGGAGCTGGCCCCTAT...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCCCACCAGTGTTCCCATaGCTACTAAGAGAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLPPVFP*LLRELW
Trigger: CCACAACTCTCTTAGTAGTCATGGGAACACTGGTGG...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTCCACCAGTGTTCCCATaGCTACTAAGAGAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGPPVFP*LLRELW
Trigger: CCACAACTCTCTTAGTAGTCATGGGAACACTGGTGG...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGCGGCTCGCACCTCTGTaGACTGCCCCCGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSERLAPL*TAPGLA
Trigger: AGCAAGGCCGGGGGCAGTGCACAGAGGTGCGAGCCG...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp ATGAAATTTGCCTGGAAATCTCAAGAGCCATTAACTTCTCTGAAGTGGGGTCCACTCTGCACCCAGGCGTaGGCAGCACTCCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: MKFAWKSQEPLTSLKWGPLCTQA*AALLVH
Trigger: GTGAACAAGGAGTGCTGCCCACGCCTGGGTGCAGAG...TGGACCCCACTTCAGAGAAGTTAATGGCTCTTGAGATTTCCAGGCAAATTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTCTCTGCACCCAGGCGTaGGCAGCACTCCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITLCTQA*AALLVH
Trigger: GTGAACAAGGAGTGCTGCCCACGCCTGGGTGCAGAG...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCCACTTGCAGGTCCGGTaGAAGAATTTTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLHLQVR*KNFLGH
Trigger: GTGGCCAAGAAAATTCTTCCACCGGACCTGCAAGTG...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGGCGGCTGGGTTCCATTaGGCCCAAGCAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSEAAGFH*AQAGPA
Trigger: GGCTGGGCCTGCTTGGGCCCAATGGAACCCAGCCGC...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp AGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTGATGTGAGAAATCTATaGCCCTGTAGGGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: RISSFIVSVRTVAWPASSDVRNL*PCRGVL
Trigger: CAGGACGCCCCTACAGGGCCATAGATTTCTCACATC...AGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp AGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTGTCAGAACTGTGGCTTaGCCAGCCTCTTCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: RISSFIVSVRTVAWPASSVRTVA*PASSLR
Trigger: CCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGAC...AGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCACAGACTCGGGGGAACTaGCCCTGGGCTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSQTRGN*PWAPGR
Trigger: CCTGCCAGGAGCCCAGGGTCAGTTCCCCCGAGTCTG...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR TCA 90 bp ACAGTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTTCCATTGCACAAGGTaGCCAGGTGGTTGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: TVRISSFIVSVRTVAWPAFHCTR*PGGCSH
Trigger: ATGACTACAACCACCTGGTCACCTTGTGCAATGGAA...GGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTAAAAGTAACTTCACCTaGGGAAAGGCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VRISSFIVSVRTVAWPASKSNFT*GKAGSP
Trigger: AGGAGAGCCAGCCTTTCCTCAGGTGAAGTTACTTTT...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR GCA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTAGTTTCCTGTGCACTTaGAGGTCCGGTGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: VRISSFIVSVRTVAWPASSFLCT*RSGGRI
Trigger: AATTCTTCCACCGGACCTGCAAGTGCACAGGAAACT...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp CTGGTCAGTCACTTGAAGCAGCCACCTGCTTCCACCCCAGGATTAGTCACTAAAAAGGAATGGATGTTCTaGCGAATCACTGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LVSHLKQPPASTPGLVTKKEWMF*RITGGF
Trigger: GAAACCACCAGTGATTCGGCAGAACATCCATTCCTT...TTTAGTGACTAATCCTGGGGTGGAAGCAGGTGGCTGCTTCAAGTGACTGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR GCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTCTGCAGTTGGCAAACTaGGGCTGGGTTCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITLQLAN*GWVPLG
Trigger: GCCCAATGGAACCCAGCCGCAGTTTGCCAACTGCAG...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp ACAGTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCACCAAAGGGGGCTCATaGCTTTATAATTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TVRISSFIVSVRTVAWPATKGGS*LYNWES
Trigger: GCTCTCCCAATTATAAAGCCATGAGCCCCCTTTGGT...GGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTACCAAAGGGGGCTCATaGCTTTATAATTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGTKGGS*LYNWES
Trigger: GCTCTCCCAATTATAAAGCCATGAGCCCCCTTTGGT...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTTCTTCCGCTCGCAGTTaGGACCGGTCCAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITSSARS*DRSSQT
Trigger: AGTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGA...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTTTGGCAAACTGCGGCTaGGTTCCATTGGGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITLANCG*VPLGPS
Trigger: GCTTGGGCCCAATGGAACCCAGCCGCAGTTTGCCAA...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp AGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCATAAACACTGCAGTTaGCAAACTGCGGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RISSFIVSVRTVAWPASSHKHCS*QTAAGF
Trigger: GAACCCAGCCGCAGTTTGCCAACTGCAGTGTTTATG...AGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTCCAGACACAACAAATaGTACCGGTGCCAGGTAACA +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLSRHNK*YRCQVT
Trigger: TGTTACCTGGCACCGGTACCATTTGTTGTGTCTGGA...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTTTGCCAATGAGTCGCTaGAGATCTCTTTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGLPMSR*RSLSRH
Trigger: GTGTCTGGAAAGAGATCTCCAGCGACTCATTGGCAA...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp AAAGCCACCAGTGTTCCCATGACTACTAAGAGAGTTGTGGGCCAACCTGGAGTTAGACAGTTTCCCAGCTaGAGAATCTTGAGTTCCGAC +
Preference number: 4 (lower is better)
Translates to: KATSVPMTTKRVVGQPGVRQFPS*RILSSD
Trigger: GTCGGAACTCAAGATTCTCCAGCTGGGAAACTGTCT...AACTCCAGGTTGGCCCACAACTCTCTTAGTAGTCATGGGAACACTGGTGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR TCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTGCAGCCCAAGCAACTaGGCAGAAACCCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGCSPSN*AETPTK
Trigger: TTTGGTGGGGGTTTCTGCTCAGTTGCTTGGGCTGCA...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR TCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTACAAATGCAGGTCCTTaGTGTGAGAAATCTATGGCC +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGTNAGP*CEKSMA
Trigger: GGCCATAGATTTCTCACATCAAGGACCTGCATTTGT...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTAAGACTCATTGCCAATaGGTCGCTGGAGATCTCTTT +
Preference number: 4 (lower is better)
Translates to: VRISSFIVSVRTVAWPASKTHCQ*VAGDLF
Trigger: AAAGAGATCTCCAGCGACTCATTGGCAATGAGTCTT...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCAAGGAATGGATGTTCTaGCGAATCACTGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLKEWMF*RITGGF
Trigger: GAAACCACCAGTGATTCGGCAGAACATCCATTCCTT...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCCTGCAGTTGGCAAACTaGGGCTGGGTTCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: KQASKAETTAKHLLNEIILQLAN*GWVPLG
Trigger: GCCCAATGGAACCCAGCCGCAGTTTGCCAACTGCAG...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGTCTTCCGCTCGCAGTTaGGACCGGTCCAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWSSARS*DRSSQT
Trigger: AGTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGA...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp AGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTTTGCCAATGAGTCGCTaGAGATCTCTTTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: RISSFIVSVRTVAWPASSLPMSR*RSLSRH
Trigger: GTGTCTGGAAAGAGATCTCCAGCGACTCATTGGCAA...AGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCCAGAGTCGGATCGTCTaGTCTCGCTGCCCCAAACAG +
Preference number: 4 (lower is better)
Translates to: KQASKAETTAKHLLNEIIQSRIV*SRCPKQ
Trigger: CTGTTTGGGGCAGCGAGACCAGACGATCCGACTCTG...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTCTGAAGGTAGAGTTCTaGAAGAAGGGAGGATTGTCA +
Preference number: 4 (lower is better)
Translates to: VRISSFIVSVRTVAWPASLKVEF*KKGGLS
Trigger: TGACAATCCTCCCTTCTTCCAGAACTCTACCTTCAG...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTTCAGCGTCAGAACTGTaGCTTGGCCAGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITSASEL*LGQPLL
Trigger: GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGA...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTATTGATGTATGGTCTTaGCCAGGTCTCACATTGCAC +
Preference number: 4 (lower is better)
Translates to: VRISSFIVSVRTVAWPASIDVWS*PGLTLH
Trigger: GTGCAATGTGAGACCTGGCCAAGACCATACATCAAT...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000483392.6
CDS-3UTR CCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCGGGAAGGGAGTTCCTTaGTCGCTTTCTCTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLGKGVP*SLSLFL
Trigger: TAAGAAAAGAGAAAGCGACCAAGGAACTCCCTTCCC...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446125.1
CDS-3UTR TCA 90 bp AGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTACAAATGCAGGTCCTTaGTGTGAGAAATCTATGGCC +
Preference number: 4 (lower is better)
Translates to: RISSFIVSVRTVAWPASSTNAGP*CEKSMA
Trigger: GGCCATAGATTTCTCACATCAAGGACCTGCATTTGT...AGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGCGGCAAAGTTTCCTGTaGACTTGCAGGTCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWRQSFL*TCRSGG
Trigger: TCCACCGGACCTGCAAGTGCACAGGAAACTTTGCCG...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTATCCAGAGTCCCATCTaGTTTATCAAACCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VRISSFIVSVRTVAWPASIQSPI*FIKPFQ
Trigger: TTGGAAGGGTTTGATAAAGCAGATGGGACTCTGGAT...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGCTTGAAGCAGCCACCTaGTTCCACCCCAGGATTAGT +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGLEAAT*FHPRIS
Trigger: ACTAATCCTGGGGTGGAAGCAGGTGGCTGCTTCAAG...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTTCATGGCTTTATAATTaGGAGAGCTCTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGSWLYN*ESSLSL
Trigger: GAGAGAGAGAGAGCTCTCCCAATTATAAAGCCATGA...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTGTTCTGCCGAATCACTaGTGGTTTCTTCCGCTCGCA +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITVLPNH*WFLPLA
Trigger: TGCGAGCGGAAGAAACCACCAGTGATTCGGCAGAAC...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp TTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTTGTTAAACAAGCAAGCGCTGCCCCAAACAGCTaGTCTGTACACACATCACAC +
Preference number: 4 (lower is better)
Translates to: LKVEVASSTLVGFVKQASAAPNS*SVHTSH
Trigger: GTGTGATGTGTGTACAGACCAGCTGTTTGGGGCAGC...GCTTGCTTGTTTAACAAACCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp AGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCAAAAATGGGATCATTaGCGGCTGAATGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RISSFIVSVRTVAWPASSQKWDH*RLNVAK
Trigger: CTTTGCCACATTCAGCCGCCAATGATCCCATTTTTG...AGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCGAAGAACCACAAAAATaGGATCATTGGCGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GLVPLLSASELWLGQPLLEEPQK*DHWRLN
Trigger: ATTCAGCCGCCAATGATCCCATTTTTGTGGTTCTTC...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTCACCTGAGGAAAGGCTaGCTCTCCTTTTCCTACCTG +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITHLRKG*LSFSYL
Trigger: CAGGTAGGAAAAGGAGAGCCAGCCTTTCCTCAGGTG...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCTTGTACATCCGATTGTaGCCAATAGGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEILYIRL*PIGASS
Trigger: GGAGCTGGCCCCTATTGGTCACAATCGGATGTACAA...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp ATGAAATTTGCCTGGAAATCTCAAGAGCCATTAACTTCTCTGAAGTGGGGTCCACCACCAGTGTTCCCATaGCTACTAAGAGAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: MKFAWKSQEPLTSLKWGPPPVFP*LLRELW
Trigger: CCACAACTCTCTTAGTAGTCATGGGAACACTGGTGG...TGGACCCCACTTCAGAGAAGTTAATGGCTCTTGAGATTTCCAGGCAAATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTGCACCTGTAGCTTTATaGGATTCAAATTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGAPVAL*DSNSVP
Trigger: TGGAACTGAATTTGAATCTCATAAAGCTACAGGTGC...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTCATTTTCTCCAAGGTTaGATTCTTCCCCCTATCATT +
Preference number: 4 (lower is better)
Translates to: VRISSFIVSVRTVAWPASHFLQG*ILPPII
Trigger: AATGATAGGGGGAAGAATTCAACCTTGGAGAAAATG...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCCAGCAAAAGAAAGTCTaGGTAGAGCCTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEIQQKKV*VEPPRL
Trigger: GAGCCTGGGAGGCTCTACTCAGACTTTCTTTTGCTG...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR GCA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAAGGCTGTCCACCGTCATaGAGACTCGGGGGAACTGAC +
Preference number: 4 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKEGCPPS*RLGGTD
Trigger: GTCAGTTCCCCCGAGTCTGCATGACGGTGGACAGCC...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp TTCTCTGAAGTGGGGTCCATCATGATAAGTCTGAACATCGTAGTAAAGATTGTCCACCAAGTTAGCTACTaGAGGACCTCTCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FSEVGSIMISLNIVVKIVHQVSY*RTSLPW
Trigger: CCAGGGAAGAGAGGTCCTGCAGTAGCTAACTTGGTG...GACAATCTTTACTACGATGTTCAGACTTATCATGATGGACCCCACTTCAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR GCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGATGGTTACCAGCACATaGAGGGAAGGGAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGMVTST*REGSSL
Trigger: CAAGGAACTCCCTTCCCTGCATGTGCTGGTAACCAT...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR CCA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGCTGACCCTGGGCTCCTaGCAGGATTTTGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSELTLGS*QDFAAQ
Trigger: TTGGGCTGCAAAATCCTGCCAGGAGCCCAGGGTCAG...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAGAGAGCCACAGACATTaGCCGACTCTGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSESHRH*PTLHPG
Trigger: GCCTGGGTGCAGAGTCGGCCAATGTCTGTGGCTCTC...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCGCTGCCCCAAACAGCTaGTCTGTACACACATCACAC +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEIAAPNS*SVHTSH
Trigger: GTGTGATGTGTGTACAGACCAGCTGTTTGGGGCAGC...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
3UTR CAA 72 bp CCAAAGAGACCTCAGAGTAATGGGACTCAAGTCAAATaGTCTCATGTTCAGGTTTACAGCCTCACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PKRPQSNGTQVK*SHVQVYSLTSL
Trigger: AAGGCTGGTGAGGCTGTAAACCTGAACATGAGACAATTTGACTTGAGTCCCATTACTCTGAGGTCTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTGCCAGTGTTGTGTGGTaGTCACGTAGTCGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSASVVW*SRSRGV
Trigger: TACACCCCGACTACGTGATCACCACACAACACTGGC...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR TCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGCCAGTGTTGTGTGGTaGTCACGTAGTCGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVASVVW*SRSRGV
Trigger: TACACCCCGACTACGTGATCACCACACAACACTGGC...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR TCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTCCATTGCACAAGGTaGCCAGGTGGTTGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGFHCTR*PGGCSH
Trigger: ATGACTACAACCACCTGGTCACCTTGTGCAATGGAA...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTGTGCTGTATTTTCCATaGATATTGTTAATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VPLLSASELWLGQPLLLGVLYFP*ILLMAG
Trigger: TCCTGCCATTAACAATATTCATGGAAAATACAGCAC...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACCCTGGTCAGTCACTTaGAGCAGCCACCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKEPWSVT*SSHLLP
Trigger: TGGAAGCAGGTGGCTGCTTCAAGTGACTGACCAGGG...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGGCATCAGTAAAGGAATaGAGAACCAGCACATGCAGG +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGASVKE*RTSTCR
Trigger: CCTGCATGTGCTGGTTCTTCATTCCTTTACTGATGC...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446125.1
CDS-3UTR GCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTAGTTTCCTGTGCACTTaGAGGTCCGGTGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITSFLCT*RSGGRI
Trigger: AATTCTTCCACCGGACCTGCAAGTGCACAGGAAACT...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTCGGCAAAGTTTCCTGTaGACTTGCAGGTCCGGTGGA +
Preference number: 4 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVRQSFL*TCRSGG
Trigger: TCCACCGGACCTGCAAGTGCACAGGAAACTTTGCCG...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGATCGTCTGGTCTCGCTaGCCCAAACAGCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSEIVWSR*PKQLVC
Trigger: ACAGACCAGCTGTTTGGGGCAGCGAGACCAGACGAT...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTAGGTTGGCAATTTCATaGTGTTTCTTCCCATTTGAT +
Preference number: 4 (lower is better)
Translates to: VRISSFIVSVRTVAWPASRLAIS*CFFPFD
Trigger: ATCAAATGGGAAGAAACAGCATGAAATTGCCAACCT...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp ACAGTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCCTGTGTATCTCTTGCTaGTTAAATGTGTCTCCATTA +
Preference number: 4 (lower is better)
Translates to: TVRISSFIVSVRTVAWPALCISC*LNVSPL
Trigger: TAATGGAGACACATTTAAGCAGCAAGAGATACACAG...GGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp TTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTTGTTAAACAAGCAAGCGTGGAAGAATTTTCTTaGCCACAGCTCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: LKVEVASSTLVGFVKQASVEEFS*PQLTVI
Trigger: GATGACCGTGAGCTGTGGCCAAGAAAATTCTTCCAC...GCTTGCTTGTTTAACAAACCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGAGTCGGATCGTCTaGTCTCGCTGCCCCAAACAG +
Preference number: 4 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKEQSRIV*SRCPKQ
Trigger: CTGTTTGGGGCAGCGAGACCAGACGATCCGACTCTG...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp TTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTTGTTAAACAAGCAAGCAGACAGTTTCCCAGCTaGAGAATCTTGAGTTCCGAC +
Preference number: 4 (lower is better)
Translates to: LKVEVASSTLVGFVKQASRQFPS*RILSSD
Trigger: GTCGGAACTCAAGATTCTCCAGCTGGGAAACTGTCT...GCTTGCTTGTTTAACAAACCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTCAGCGTCAGAACTGTaGCTTGGCCAGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSSASEL*LGQPLL
Trigger: GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGA...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCCCAGCTGGAGAATCTTaGGTTCCGACTAATCAGAGT +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEIPAGES*VPTNQS
Trigger: ACTCTGATTAGTCGGAACTCAAGATTCTCCAGCTGG...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCTTCCATTGCACAAGGTaGCCAGGTGGTTGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: KQASKAETTAKHLLNEIIFHCTR*PGGCSH
Trigger: ATGACTACAACCACCTGGTCACCTTGTGCAATGGAA...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTGGGATCATTGGCGGCTaGATGTGGCAAAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSGIIGG*MWQSVC
Trigger: ACAAACGCTTTGCCACATTCAGCCGCCAATGATCCC...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTCCCCAACTATCCTaGGCTCAGAGCATAAACCTT +
Preference number: 4 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWVPQLS*AQSINL
Trigger: AAGGTTTATGCTCTGAGCTCAGGATAGTTGGGGAAC...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR GCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCCGGTCCAGCCAAACTTaGAGTCTCCACAATTATAGC +
Preference number: 4 (lower is better)
Translates to: KQASKAETTAKHLLNEIIRSSQT*SLHNYS
Trigger: GCTATAATTGTGGAGACTGCAAGTTTGGCTGGACCG...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGAACAAATGGTACCGGTaGCAGGTAACAAATGCAGGT +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGNKWYR*QVTNAG
Trigger: ACCTGCATTTGTTACCTGGCACCGGTACCATTTGTT...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTAACAAATGGTACCGGTaGCAGGTAACAAATGCAGGT +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITNKWYR*QVTNAG
Trigger: ACCTGCATTTGTTACCTGGCACCGGTACCATTTGTT...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp AGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTAGGTTGGCAATTTCATaGTGTTTCTTCCCATTTGAT +
Preference number: 4 (lower is better)
Translates to: RISSFIVSVRTVAWPASSRLAIS*CFFPFD
Trigger: ATCAAATGGGAAGAAACAGCATGAAATTGCCAACCT...AGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp AAACTGGCAGATCGATGGCATAGCTGTAGCCAAGTTGGTCTGAGGTTAAAAAGAATCCAGAGTCCCATCTaGTTTATCAAACCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KLADRWHSCSQVGLRLKRIQSPI*FIKPFQ
Trigger: TTGGAAGGGTTTGATAAAGCAGATGGGACTCTGGAT...TCTTTTTAACCTCAGACCAACTTGGCTACAGCTATGCCATCGATCTGCCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR GCA 90 bp TTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTTGTTAAACAAGCAAGCCTGAGGCCAGGCATCTaGAGGAGGATTAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: LKVEVASSTLVGFVKQASLRPGI*RRIKSF
Trigger: AAAAGATTTAATCCTCCTGCAGATGCCTGGCCTCAG...GCTTGCTTGTTTAACAAACCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGCTGAGGCCAGGCATCTaGAGGAGGATTAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGLRPGI*RRIKSF
Trigger: AAAAGATTTAATCCTCCTGCAGATGCCTGGCCTCAG...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp TTCTCTGAAGTGGGGTCCATCATGATAAGTCTGAACATCGTAGTAAAGATTGTCGAGCCTGCTCTCAGATaGACCTGTAGCTTTATGAGA +
Preference number: 4 (lower is better)
Translates to: FSEVGSIMISLNIVVKIVEPALR*TCSFMR
Trigger: TCTCATAAAGCTACAGGTGCATCTGAGAGCAGGCTC...GACAATCTTTACTACGATGTTCAGACTTATCATGATGGACCCCACTTCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTGATGTGAGAAATCTATaGCCCTGTAGGGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSDVRNL*PCRGVL
Trigger: CAGGACGCCCCTACAGGGCCATAGATTTCTCACATC...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCTCCAGACACAACAAATaGTACCGGTGCCAGGTAACA +
Preference number: 4 (lower is better)
Translates to: KQASKAETTAKHLLNEIISRHNK*YRCQVT
Trigger: TGTTACCTGGCACCGGTACCATTTGTTGTGTCTGGA...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTACTCGTTCCTCCCAGTaGCAAAGTTCCAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSTRSSQ*QSSSRA
Trigger: TGCCCTACTGGAACTTTGCCACTGGGAGGAACGAGT...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp TTCTCTGAAGTGGGGTCCATCATGATAAGTCTGAACATCGTAGTAAAGATTGTCAGACAGTTTCCCAGCTaGAGAATCTTGAGTTCCGAC +
Preference number: 4 (lower is better)
Translates to: FSEVGSIMISLNIVVKIVRQFPS*RILSSD
Trigger: GTCGGAACTCAAGATTCTCCAGCTGGGAAACTGTCT...GACAATCTTTACTACGATGTTCAGACTTATCATGATGGACCCCACTTCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGCAAAAATGGGATCATTaGCGGCTGAATGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGQKWDH*RLNVAK
Trigger: CTTTGCCACATTCAGCCGCCAATGATCCCATTTTTG...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGAAACTGGCAGATCGATaGCATAGCTGTAGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGKLADR*HSCSQV
Trigger: AACTTGGCTACAGCTATGCCATCGATCTGCCAGTTT...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp TTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTTGTTAAACAAGCAAGCAAACTGGCAGATCGATaGCATAGCTGTAGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LKVEVASSTLVGFVKQASKLADR*HSCSQV
Trigger: AACTTGGCTACAGCTATGCCATCGATCTGCCAGTTT...GCTTGCTTGTTTAACAAACCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp ATGAAATTTGCCTGGAAATCTCAAGAGCCATTAACTTCTCTGAAGTGGGGTCCACTACTAAGAGAGTTGTaGGCCAACCTGGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: MKFAWKSQEPLTSLKWGPLLREL*ANLEFL
Trigger: AAGAAACTCCAGGTTGGCCCACAACTCTCTTAGTAG...TGGACCCCACTTCAGAGAAGTTAATGGCTCTTGAGATTTCCAGGCAAATTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTGTCAGAACTGTGGCTTaGCCAGCCTCTTCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSVRTVA*PASSLR
Trigger: CCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGAC...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
3UTR CAA 72 bp AATAGGAAGAGCTTCAACCTTAGAGTCTCCAACAAATaGACCCATCTTGAAGGCTTATCTGGGAGATCACCA +
Preference number: 4 (lower is better)
Translates to: NRKSFNLRVSNK*THLEGLSGRSP
Trigger: TGGTGATCTCCCAGATAAGCCTTCAAGATGGGTCAATTTGTTGGAGACTCTAAGGTTGAAGCTCTTCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCAAGACTCATTGCCAATaGGTCGCTGGAGATCTCTTT +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEIKTHCQ*VAGDLF
Trigger: AAAGAGATCTCCAGCGACTCATTGGCAATGAGTCTT...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCCTTCAGTCTCACTCCTaGTGCACAGAAACCAGATAT +
Preference number: 4 (lower is better)
Translates to: KQASKAETTAKHLLNEIILQSHS*CTETRY
Trigger: ATATCTGGTTTCTGTGCATCAGGAGTGAGACTGAAG...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp TTCTCTGAAGTGGGGTCCATCATGATAAGTCTGAACATCGTAGTAAAGATTGTCCAAATTGACCCATCTTaGAGGCTTATCTGGGAGATC +
Preference number: 4 (lower is better)
Translates to: FSEVGSIMISLNIVVKIVQIDPS*RLIWEI
Trigger: GATCTCCCAGATAAGCCTTCAAGATGGGTCAATTTG...GACAATCTTTACTACGATGTTCAGACTTATCATGATGGACCCCACTTCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp ATGAAATTTGCCTGGAAATCTCAAGAGCCATTAACTTCTCTGAAGTGGGGTCCAGAGTCTCCAACAAATTaGCCCATCTTGAAGGCTTAT +
Preference number: 4 (lower is better)
Translates to: MKFAWKSQEPLTSLKWGPESPTN*PILKAY
Trigger: ATAAGCCTTCAAGATGGGTCAATTTGTTGGAGACTC...TGGACCCCACTTCAGAGAAGTTAATGGCTCTTGAGATTTCCAGGCAAATTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR GCA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGCAGAGGTTACATGTGTaGACATGTGTACATGAACGT +
Preference number: 4 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGQRLHV*TCVHER
Trigger: ACGTTCATGTACACATGTGCACACATGTAACCTCTG...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp TTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTTGTTAAACAAGCAAGCCAGAGGTTACATGTGTaGACATGTGTACATGAACGT +
Preference number: 4 (lower is better)
Translates to: LKVEVASSTLVGFVKQASQRLHV*TCVHER
Trigger: ACGTTCATGTACACATGTGCACACATGTAACCTCTG...GCTTGCTTGTTTAACAAACCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCCTGAGGCCAGGCATCTaGAGGAGGATTAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEILRPGI*RRIKSF
Trigger: AAAAGATTTAATCCTCCTGCAGATGCCTGGCCTCAG...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAGATGTGAGAAATCTATaGCCCTGTAGGGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSDVRNL*PCRGVL
Trigger: CAGGACGCCCCTACAGGGCCATAGATTTCTCACATC...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAAACTCGTTCCTCCCAGTaGCAAAGTTCCAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKETRSSQ*QSSSRA
Trigger: TGCCCTACTGGAACTTTGCCACTGGGAGGAACGAGT...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCCTGAAGGTAGAGTTCTaGAAGAAGGGAGGATTGTCA +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEILKVEF*KKGGLS
Trigger: TGACAATCCTCCCTTCTTCCAGAACTCTACCTTCAG...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGAAACTGGCAGATCGATaGCATAGCTGTAGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWKLADR*HSCSQV
Trigger: AACTTGGCTACAGCTATGCCATCGATCTGCCAGTTT...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGCTACTAAGAGAGTTGTaGGCCAACCTGGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWLLREL*ANLEFL
Trigger: AAGAAACTCCAGGTTGGCCCACAACTCTCTTAGTAG...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGATTGATGTATGGTCTTaGCCAGGTCTCACATTGCAC +
Preference number: 4 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWIDVWS*PGLTLH
Trigger: GTGCAATGTGAGACCTGGCCAAGACCATACATCAAT...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000483392.6
CDS-3UTR CCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTTTGCATGGGGTAAACTaGTTCTTGATGAGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITLHGVN*FLMSLA
Trigger: TGCAAGACTCATCAAGAACCAGTTTACCCCATGCAA...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTAACTGCTCTCTTTCCTaGGGACTCAAGGAATGGATG +
Preference number: 4 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVNCSLS*GLKEWM
Trigger: CATCCATTCCTTGAGTCCTCAGGAAAGAGAGCAGTT...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR TCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTCCAGCTGGAGAATCTTaGGTTCCGACTAATCAGAGT +
Preference number: 4 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVPAGES*VPTNQS
Trigger: ACTCTGATTAGTCGGAACTCAAGATTCTCCAGCTGG...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCCCAGATATGAGCAGATaGAATTTGCCTGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: KQASKAETTAKHLLNEIIPDMSR*NLPGNL
Trigger: GAGATTTCCAGGCAAATTTCATCTGCTCATATCTGG...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCCACAGAAACCAGATATaGGCAGATGAAATTTGCCTG +
Preference number: 4 (lower is better)
Translates to: KQASKAETTAKHLLNEIIHRNQI*ADEICL
Trigger: CAGGCAAATTTCATCTGCTCATATCTGGTTTCTGTG...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCATTTACCGGGCTATCTTaGTCTTCACCACTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSFTGLS*SSPLSL
Trigger: CAGGCTCAGTGGTGAAGATCAAGATAGCCCGGTAAA...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR GCA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGCGGTCCAGCCAAACTTaGAGTCTCCACAATTATAGC +
Preference number: 4 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSERSSQT*SLHNYS
Trigger: GCTATAATTGTGGAGACTGCAAGTTTGGCTGGACCG...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCCAGAGTCCCATCTaGTTTATCAAACCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEIIQSPI*FIKPFQ
Trigger: TTGGAAGGGTTTGATAAAGCAGATGGGACTCTGGAT...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGTGGAAGAATTTTCTTaGCCACAGCTCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVVEEFS*PQLTVI
Trigger: GATGACCGTGAGCTGTGGCCAAGAAAATTCTTCCAC...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCACACTTGCAGGTCCGGTaGAAGAATTTTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSHLQVR*KNFLGH
Trigger: GTGGCCAAGAAAATTCTTCCACCGGACCTGCAAGTG...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCACATAAACACTGCAGTTaGCAAACTGCGGCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSHKHCS*QTAAGF
Trigger: GAACCCAGCCGCAGTTTGCCAACTGCAGTGTTTATG...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTCCAGACACAACAAATaGTACCGGTGCCAGGTAACA +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSSRHNK*YRCQVT
Trigger: TGTTACCTGGCACCGGTACCATTTGTTGTGTCTGGA...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTTTCTTCATTAGTCACTaGAGGGAAGAAAGGAACCAT +
Preference number: 4 (lower is better)
Translates to: ASKAETTAKHLLNEIIITFFISH*REERNH
Trigger: ATGGTTCCTTTCTTCCCTCCAGTGACTAATGAAGAA...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAAAACTGCTCTCTTTCCTaGGGACTCAAGGAATGGATG +
Preference number: 4 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKENCSLS*GLKEWM
Trigger: CATCCATTCCTTGAGTCCTCAGGAAAGAGAGCAGTT...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR TCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTACAAATGCAGGTCCTTaGTGTGAGAAATCTATGGCC +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSTNAGP*CEKSMA
Trigger: GGCCATAGATTTCTCACATCAAGGACCTGCATTTGT...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCTTTCAATATACATGCTaGGTGCCCAAAAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: KQASKAETTAKHLLNEIIFQYTC*VPKRWE
Trigger: TTCCCATCTTTTGGGCACTCAGCATGTATATTGAAA...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCGCATCAGTAAAGGAATaGAGAACCAGGAATACTCTT +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEIASVKE*RTRNTL
Trigger: AAGAGTATTCCTGGTTCTTCATTCCTTTACTGATGC...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR GCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCAAAAATCATAAACACTaGAGTTGGCAAACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEIKNHKH*SWQTAA
Trigger: AGCCGCAGTTTGCCAACTGCAGTGTTTATGATTTTT...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR GCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTAACAAATGGTACCGGTaGCAGGTAACAAATGCAGGT +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSNKWYR*QVTNAG
Trigger: ACCTGCATTTGTTACCTGGCACCGGTACCATTTGTT...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAATTGCCAATGAGTCGCTaGAGATCTCTTTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKELPMSR*RSLSRH
Trigger: GTGTCTGGAAAGAGATCTCCAGCGACTCATTGGCAA...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTCTGAAGGTAGAGTTCTaGAAGAAGGGAGGATTGTCA +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSLKVEF*KKGGLS
Trigger: TGACAATCCTCCCTTCTTCCAGAACTCTACCTTCAG...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGCAAAAATGGGATCATTaGCGGCTGAATGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSEQKWDH*RLNVAK
Trigger: CTTTGCCACATTCAGCCGCCAATGATCCCATTTTTG...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCTTCTTCATTAGTCACTaGAGGGAAGAAAGGAACCAT +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEIFFISH*REERNH
Trigger: ATGGTTCCTTTCTTCCCTCCAGTGACTAATGAAGAA...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
3UTR CAA 72 bp AGCTTTATGAGATTCAAATTCAGTTCCAACTGGGCTTaGTCCATTTCTCTGGCTTTAGCAGTCCTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: SFMRFKFSSNWA*SISLALAVLLH
Trigger: ATGCAAAAGGACTGCTAAAGCCAGAGAAATGGACAAAGCCCAGTTGGAACTGAATTTGAATCTCATAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAAGACTCATTGCCAATaGGTCGCTGGAGATCTCTTT +
Preference number: 4 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSKTHCQ*VAGDLF
Trigger: AAAGAGATCTCCAGCGACTCATTGGCAATGAGTCTT...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCAGGTTGGCAATTTCATaGTGTTTCTTCCCATTTGAT +
Preference number: 4 (lower is better)
Translates to: KQASKAETTAKHLLNEIIRLAIS*CFFPFD
Trigger: ATCAAATGGGAAGAAACAGCATGAAATTGCCAACCT...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCCTGTGTATCTCTTGCTaGTTAAATGTGTCTCCATTA +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEILCISC*LNVSPL
Trigger: TAATGGAGACACATTTAAGCAGCAAGAGATACACAG...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCTCTCACTTGAATTCTTaGTGTTATGCCAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: VKQASKAETTAKHLLNEISHLNS*CYASKR
Trigger: TCTTTTGCTGGCATAACAGCAAGAATTCAAGTGAGA...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR CCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTAGCAGTCCTTTTGCATaGGGTAAACTGGTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVSSPFA*GKLVLD
Trigger: ATCAAGAACCAGTTTACCCCATGCAAAAGGACTGCT...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR TCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTCAGGCTTTGTCTAATTaGGTTAATTTACAGAGCACC +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSQALSN*VNLQST
Trigger: GGTGCTCTGTAAATTAACTCAATTAGACAAAGCCTG...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR TCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTCAGCTAAGCATCTTCTaGATGAGATCATCATCACTA +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSQLSIF*MRSSSL
Trigger: TAGTGATGATGATCTCATTCAGAAGATGCTTAGCTG...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR TCA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTCAGCTAAGCATCTTCTaGATGAGATCATCATCACTA +
Preference number: 4 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVQLSIF*MRSSSL
Trigger: TAGTGATGATGATCTCATTCAGAAGATGCTTAGCTG...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR GCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTAAAAATCATAAACACTaGAGTTGGCAAACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSKNHKH*SWQTAA
Trigger: AGCCGCAGTTTGCCAACTGCAGTGTTTATGATTTTT...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAATCATGGCTTTATAATTaGGAGAGCTCTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKESWLYN*ESSLSL
Trigger: GAGAGAGAGAGAGCTCTCCCAATTATAAAGCCATGA...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTAAATCACCACAAAAATaGGATCATTGGCGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSKSPQK*DHWRLN
Trigger: ATTCAGCCGCCAATGATCCCATTTTTGTGGTGATTT...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446125.1
CDS-3UTR TCA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGGCTTTGTCTAATTaGGTTAATTTACAGAGCACC +
Preference number: 4 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKEQALSN*VNLQST
Trigger: GGTGCTCTGTAAATTAACTCAATTAGACAAAGCCTG...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CCA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCATTCTTCATTAGTCACTaGAGGGAAGAAAGGAACCAT +
Preference number: 4 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSFFISH*REERNH
Trigger: ATGGTTCCTTTCTTCCCTCCAGTGACTAATGAAGAA...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CCA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCACTCTTTTCACAAAAATaGGATCATTGGCGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSLFSQK*DHWRLN
Trigger: ATTCAGCCGCCAATGATCCCATTTTTGTGAAAAGAG...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483392.6
3UTR CAA 72 bp TTATTAGATATCACAAATTGTCAGGTCTATCTTTATTaGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LLDITNCQVYLY*KVEVASSTLVG
Trigger: CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTTGTGATATCTAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS TCA 90 bp GGCCTTGTGTCGGCTCGCACCTCTGTGCACTGCCCCCGGCCTTGCTaGGAGCCACAGACATTGGCCGACTCTGCACCCAGGCGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLVSARTSVHCPRPC*EPQTLADSAPRRGQ
Trigger: CTGCCCACGCCTGGGTGCAGAGTCGGCCAATGTCTGTGGCTCTCAGCAAGGCCGGGGGCAGTGCACAGAGGTGCGAGCCGACACAAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CCA 90 bp GCACCTCTGTGCACTGCCCCCGGCCTTGCTGAGAGCCACAGACATTaGCCGACTCTGCACCCAGGCGTGGGCAGCACTCCTTGTTCACTA +
Preference number: 5 (lower is better)
Translates to: APLCTAPGLAESHRH*PTLHPGVGSTPCSL
Trigger: TAGTGAACAAGGAGTGCTGCCCACGCCTGGGTGCAGAGTCGGCCAATGTCTGTGGCTCTCAGCAAGGCCGGGGGCAGTGCACAGAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS GCA 90 bp CCAGGCGTGGGCAGCACTCCTTGTTCACTAGGCTGTCCACCGTCATaGAGACTCGGGGGAACTGACCCTGGGCTCCTGGCAGGATTTTGC +
Preference number: 5 (lower is better)
Translates to: PGVGSTPCSLGCPPS*RLGGTDPGLLAGFC
Trigger: GCAAAATCCTGCCAGGAGCCCAGGGTCAGTTCCCCCGAGTCTGCATGACGGTGGACAGCCTAGTGAACAAGGAGTGCTGCCCACGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS TCA 90 bp TCCTTGTTCACTAGGCTGTCCACCGTCATGCAGACTCGGGGGAACTaGCCCTGGGCTCCTGGCAGGATTTTGCAGCCCAAGCAACTGAGC +
Preference number: 5 (lower is better)
Translates to: SLFTRLSTVMQTRGN*PWAPGRILQPKQLS
Trigger: GCTCAGTTGCTTGGGCTGCAAAATCCTGCCAGGAGCCCAGGGTCAGTTCCCCCGAGTCTGCATGACGGTGGACAGCCTAGTGAACAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS TCA 90 bp GCTGGGTTCCATTGGGCCCAAGCAGGCCCAGCCAGTGTTGTGTGGTaGTCACGTAGTCGGGGTGTACTCTCTTCTTCGCGAGATCTAAGG +
Preference number: 5 (lower is better)
Translates to: AGFHWAQAGPASVVW*SRSRGVLSSSRDLR
Trigger: CCTTAGATCTCGCGAAGAAGAGAGTACACCCCGACTACGTGATCACCACACAACACTGGCTGGGCCTGCTTGGGCCCAATGGAACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS-3UTR CAA 90 bp TTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTAAGGCATGCGGCTGGGTTCCATaGGGCCCAAGCAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LLSASELWLGQPLLLGKACGWVP*GPSRPS
Trigger: GCTGGGCCTGCTTGGGCCCAATGGAACCCAGCCGCA...TGCCTTACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp TGGTTCTTGATGAGTCTTGCACCCTCTAGGACCCCTTATGTTGAAGGCAGCTCCTTCTTCCGCTCGCAGTaGGGACCGGTCCAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: WFLMSLAPSRTPYVEGSSFFRSQ*GPVQPN
Trigger: GTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGAA...GGAGCTGCCTTCAACATAAGGGGTCCTAGAGGGTGCAAGACTCATCAAGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS GCA 90 bp CTGGTGGTTTCTTCCGCTCGCAGTTGGGACCGGTCCAGCCAAACTTaGAGTCTCCACAATTATAGCCGGCAAAGTTTCCTGTGCACTTGC +
Preference number: 5 (lower is better)
Translates to: LVVSSARSWDRSSQT*SLHNYSRQSFLCTC
Trigger: GCAAGTGCACAGGAAACTTTGCCGGCTATAATTGTGGAGACTGCAAGTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGAAACCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CCA 90 bp CGACTAATCAGAGTCGGATCGTCTGGTCTCGCTGCCCCAAACAGCTaGTCTGTACACACATCACACTCGTTCCTCCCAGTGGCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: RLIRVGSSGLAAPNS*SVHTSHSFLPVAKF
Trigger: GAACTTTGCCACTGGGAGGAACGAGTGTGATGTGTGTACAGACCAGCTGTTTGGGGCAGCGAGACCAGACGATCCGACTCTGATTAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
ENST00000483392.6
ENST00000490854.1
CDS-3UTR CAA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCCGTGGGCAGCACTCCTaGTTCACTAGGCTGTCCACC +
Preference number: 5 (lower is better)
Translates to: GLVPLLSASELWLGQPLLRGQHS*FTRLST
Trigger: GGTGGACAGCCTAGTGAACAAGGAGTGCTGCCCACG...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS TCA 90 bp CAGGAGCCATTACCTATCACAGACAGTTTCCCAGCTGGAGAATCTTaGGTTCCGACTAATCAGAGTCGGATCGTCTGGTCTCGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: QEPLPITDSFPAGES*VPTNQSRIVWSRCP
Trigger: GGGGCAGCGAGACCAGACGATCCGACTCTGATTAGTCGGAACTCAAGATTCTCCAGCTGGGAAACTGTCTGTGATAGGTAATGGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CCA 90 bp AATGGATGTTCTGCCGAATCACTGGTGGTTTCTTCCGCTCGCAGTTaGGACCGGTCCAGCCAAACTTGCAGTCTCCACAATTATAGCCGG +
Preference number: 5 (lower is better)
Translates to: NGCSAESLVVSSARS*DRSSQTCSLHNYSR
Trigger: CCGGCTATAATTGTGGAGACTGCAAGTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGAAACCACCAGTGATTCGGCAGAACATCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CCA 90 bp TCTTTCCTGAGGACTCAAGGAATGGATGTTCTGCCGAATCACTGGTaGTTTCTTCCGCTCGCAGTTGGGACCGGTCCAGCCAAACTTGCA +
Preference number: 5 (lower is better)
Translates to: SFLRTQGMDVLPNHW*FLPLAVGTGPAKLA
Trigger: TGCAAGTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGAAACCACCAGTGATTCGGCAGAACATCCATTCCTTGAGTCCTCAGGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CCA 90 bp CTCTCTTTCCTGAGGACTCAAGGAATGGATGTTCTGCCGAATCACTaGTGGTTTCTTCCGCTCGCAGTTGGGACCGGTCCAGCCAAACTT +
Preference number: 5 (lower is better)
Translates to: LSFLRTQGMDVLPNH*WFLPLAVGTGPAKL
Trigger: AAGTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGAAACCACCAGTGATTCGGCAGAACATCCATTCCTTGAGTCCTCAGGAAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS-3UTR CAA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTGCTCCTGGCAGGATTTaGCAGCCCAAGCAACTGAGC +
Preference number: 5 (lower is better)
Translates to: VRISSFIVSVRTVAWPASAPGRI*QPKQLS
Trigger: GCTCAGTTGCTTGGGCTGCAAAATCCTGCCAGGAGC...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCGCTCCTGGCAGGATTTaGCAGCCCAAGCAACTGAGC +
Preference number: 5 (lower is better)
Translates to: GLVPLLSASELWLGQPLLAPGRI*QPKQLS
Trigger: GCTCAGTTGCTTGGGCTGCAAAATCCTGCCAGGAGC...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCCAGGCCCAGCCAGTGTaGTGTGGTGATCACGTAGTC +
Preference number: 5 (lower is better)
Translates to: GLVPLLSASELWLGQPLLQAQPV*CGDHVV
Trigger: GACTACGTGATCACCACACAACACTGGCTGGGCCTG...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp TTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTAAGGCACTAGGACCCCTTATGTaGAAGGCAGCTCCAGGGACC +
Preference number: 5 (lower is better)
Translates to: LLSASELWLGQPLLLGKALGPLM*KAAPGT
Trigger: GGTCCCTGGAGCTGCCTTCAACATAAGGGGTCCTAG...TGCCTTACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS TCA 90 bp GTAGTCATCCAAGCTATCACAGACAGTTTCCCAGCTGGAGAATCTTaGGTTCCGACTAATCAGAGTCGGATCGTCTGGTCTCGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: VVIQAITDSFPAGES*VPTNQSRIVWSRCP
Trigger: GGGGCAGCGAGACCAGACGATCCGACTCTGATTAGTCGGAACTCAAGATTCTCCAGCTGGGAAACTGTCTGTGATAGCTTGGATGACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
ENST00000490854.1
CDS TCA 90 bp CTCTTCTTCGCGAGATCTAAGGCGCCCAAGAACTGCTCTCTTTCCTaGGGACTCAAGGAATGGATGTTCTGCCGAATCACTGGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: LFFARSKAPKNCSLS*GLKEWMFCRITGGF
Trigger: GAAACCACCAGTGATTCGGCAGAACATCCATTCCTTGAGTCCTCAGGAAAGAGAGCAGTTCTTGGGCGCCTTAGATCTCGCGAAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS GCA 90 bp CCCAAAAATGGGGAGAGGTGCACGTGCAGCCATGCATTCAAGAACTaGTATGGGAAGAATCTAGGATGGAGTCAAGCCCTCCTGGAATAC +
Preference number: 5 (lower is better)
Translates to: PKNGERCTCSHAFKN*YGKNLGWSQALLEY
Trigger: GTATTCCAGGAGGGCTTGACTCCATCCTAGATTCTTCCCATAGCAGTTCTTGAATGCATGGCTGCACGTGCACCTCTCCCCATTTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472871.1
ENST00000490854.1
CDS-3UTR CAA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGACCACTCCAGGGCCTaGTGTCGGCTCGCACCTCTG +
Preference number: 5 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWDHSRA*CRLAPL
Trigger: CAGAGGTGCGAGCCGACACAAGGCCCTGGAGTGGTC...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS CCA 90 bp AAATGGGGAGAGGTGCACGTGCAGCCATGCATTCAAGAACTGCTATaGGAAGAATCTAGGATGGAGTCAAGCCCTCCTGGAATACATTGG +
Preference number: 5 (lower is better)
Translates to: KWGEVHVQPCIQELL*EESRMESSPPGIHW
Trigger: CCAATGTATTCCAGGAGGGCTTGACTCCATCCTAGATTCTTCCCATAGCAGTTCTTGAATGCATGGCTGCACGTGCACCTCTCCCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472871.1
ENST00000490854.1
CDS-3UTR CAA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTGGTGGAAGAATTTTCTaGGCCACAGCTCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: VRISSFIVSVRTVAWPASGGRIF*ATAHGH
Trigger: ATGACCGTGAGCTGTGGCCAAGAAAATTCTTCCACC...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp ACAGTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCGGTGGAAGAATTTTCTaGGCCACAGCTCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: TVRISSFIVSVRTVAWPAGGRIF*ATAHGH
Trigger: ATGACCGTGAGCTGTGGCCAAGAAAATTCTTCCACC...GGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCAAGTTTCCTGTGCACTaGCAGGTCCGGTGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: GLVPLLSASELWLGQPLLKFPVH*QVRWKN
Trigger: ATTCTTCCACCGGACCTGCAAGTGCACAGGAAACTT...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTAAGTTTCCTGTGCACTaGCAGGTCCGGTGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: VRISSFIVSVRTVAWPASKFPVH*QVRWKN
Trigger: ATTCTTCCACCGGACCTGCAAGTGCACAGGAAACTT...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTTGCGGCTGGGTTCCATaGGGCCCAAGCAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVCGWVP*GPSRPS
Trigger: GCTGGGCCTGCTTGGGCCCAATGGAACCCAGCCGCA...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp CTGGTCAGTCACTTGAAGCAGCCACCTGCTTCCACCCCAGGATTAGTCACTAAAATGAAGGCTCATCACTaGAGAATCCAGAGTCCCATC +
Preference number: 5 (lower is better)
Translates to: LVSHLKQPPASTPGLVTKMKAHH*RIQSPI
Trigger: GATGGGACTCTGGATTCTCAAGTGATGAGCCTTCAT...TTTAGTGACTAATCCTGGGGTGGAAGCAGGTGGCTGCTTCAAGTGACTGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp CTTCAACTGAAACTGGCAGATCGATGGCATAGCTGTAGCCAAGTTGGTCTGAGGTGGAAGAAGGGAGGATaGTCAAACTTCTGGAGAGAC +
Preference number: 5 (lower is better)
Translates to: LQLKLADRWHSCSQVGLRWKKGG*SNFWRD
Trigger: GTCTCTCCAGAAGTTTGACAATCCTCCCTTCTTCCA...CCTCAGACCAACTTGGCTACAGCTATGCCATCGATCTGCCAGTTTCAGTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR CAA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTAATGTGGCAAAGCGTTaGTCCCGTTCAGGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: VPLLSASELWLGQPLLLGNVAKR*SRSGRN
Trigger: ATTCCTTCCTGAACGGGACAAACGCTTTGCCACATT...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp CTGGTCAGTCACTTGAAGCAGCCACCTGCTTCCACCCCAGGATTAGTCACTAAAACAAAAATGGGATCATaGGCGGCTGAATGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: LVSHLKQPPASTPGLVTKTKMGS*AAECGK
Trigger: TTTGCCACATTCAGCCGCCAATGATCCCATTTTTGT...TTTAGTGACTAATCCTGGGGTGGAAGCAGGTGGCTGCTTCAAGTGACTGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS GCA 90 bp TCCTCCATGTCTCAGACATCAGAAAAGACAATCTCTGGATGCCATTaGAGGTACAGGAGCCATTACCTATCACAGACAGTTTCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SSMSQTSEKTISGCH*RYRSHYLSQTVSQL
Trigger: CAGCTGGGAAACTGTCTGTGATAGGTAATGGCTCCTGTACCTGCAATGGCATCCAGAGATTGTCTTTTCTGATGTCTGAGACATGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CCA 90 bp ACGTGCAGCCATGCATTCAAGAACTGCTATGGGAAGAATCTAGGATaGAGTCAAGCCCTCCTGGAATACATTGGTGTCTATGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: TCSHAFKNCYGKNLG*SQALLEYIGVYGFP
Trigger: AGGAAAGCCATAGACACCAATGTATTCCAGGAGGGCTTGACTCCATCCTAGATTCTTCCCATAGCAGTTCTTGAATGCATGGCTGCACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472871.1
ENST00000490854.1
CDS-3UTR CAA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTACAAAAATGGGATCATaGGCGGCTGAATGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: VRISSFIVSVRTVAWPASTKMGS*AAECGK
Trigger: TTTGCCACATTCAGCCGCCAATGATCCCATTTTTGT...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp GTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTTAGGTGGATTAGTTCCTTTATaGTCAGCGTCAGAACTGTGG +
Preference number: 5 (lower is better)
Translates to: VPLLSASELWLGQPLLLGGLVPL*SASELW
Trigger: CCACAGTTCTGACGCTGACAATAAAGGAACTAATCC...ACCTAAGAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS GCA 90 bp GACTTCTCCTCCATGTCTCAGACATCAGAAAAGACAATCTCTGGATaGCATTGCAGGTACAGGAGCCATTACCTATCACAGACAGTTTCC +
Preference number: 5 (lower is better)
Translates to: DFSSMSQTSEKTISG*HCRYRSHYLSQTVS
Trigger: GGAAACTGTCTGTGATAGGTAATGGCTCCTGTACCTGCAATGGCATCCAGAGATTGTCTTTTCTGATGTCTGAGACATGGAGGAGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS-3UTR CAA 90 bp CTTCAACTGAAACTGGCAGATCGATGGCATAGCTGTAGCCAAGTTGGTCTGAGGCAGGTCTATCTTTATTaGAAGGTAGAGGTAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LQLKLADRWHSCSQVGLRQVYLY*KVEVAS
Trigger: TGAGGCTACCTCTACCTTCAAATAAAGATAGACCTG...CCTCAGACCAACTTGGCTACAGCTATGCCATCGATCTGCCAGTTTCAGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR CAA 90 bp GTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTCTCTCACTTGAATTCTaGCTGTTATGCCAGCAAAAG +
Preference number: 5 (lower is better)
Translates to: VRISSFIVSVRTVAWPASLSLEF*LLCQQK
Trigger: CTTTTGCTGGCATAACAGCAAGAATTCAAGTGAGAG...AGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR CAA 90 bp ACAGTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTCTCTTACTTTCCTaGTCTCTGTCGTACTTTTCT +
Preference number: 5 (lower is better)
Translates to: TVRISSFIVSVRTVAWPASLLLS*SLSYFS
Trigger: AGAAAAGTACGACAGAGACAAGGAAAGTAAGAGAGA...GGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAATTCTTCCGCTCGCAGTaGGGACCGGTCCAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKEFFRSQ*GPVQPN
Trigger: GTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGAA...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp GGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCTTCTCTACCTAGTAAAGAAATaGGTAGAGGATCAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GLVPLLSASELWLGQPLLYLVKK*VEDQPK
Trigger: CTTTGGCTGATCCTCTACCAATTTCTTTACTAGGTA...GAGAAGAGGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp TTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTTGTTAAACAAGCAAGCGGGGTAAACTGGTTCTaGATGAGTCTTGCACCCTCT +
Preference number: 5 (lower is better)
Translates to: LKVEVASSTLVGFVKQASGVNWF*MSLAPS
Trigger: AGAGGGTGCAAGACTCATCAAGAACCAGTTTACCCC...GCTTGCTTGTTTAACAAACCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp ACAGTGAGGATTAGTTCCTTTATTGTCAGCGTCAGAACTGTGGCTTGGCCAGCCTCATTTTCTCCAAGGTaGAATTCTTCCCCCTATCAT +
Preference number: 5 (lower is better)
Translates to: TVRISSFIVSVRTVAWPASFSPR*NSSPYH
Trigger: ATGATAGGGGGAAGAATTCAACCTTGGAGAAAATGA...GGCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGAGGGAAGGGAGTTCCTaGGTCGCTTTCTCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGREGSS*VAFSFH
Trigger: GTGAAAAGAGAAAGCGACCAAGGAACTCCCTTCCCT...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS TCA 90 bp TTTGATTTCTTCTCAGCAAACCTTCATAGGTTCCATTGCACAAGGTaGCCAGGTGGTTGTAGTCATCCAAGCTATCACAGACAGTTTCCC +
Preference number: 5 (lower is better)
Translates to: FDFFSANLHRFHCTR*PGGCSHPSYHRQFP
Trigger: GGGAAACTGTCTGTGATAGCTTGGATGACTACAACCACCTGGTCACCTTGTGCAATGGAACCTATGAAGGTTTGCTGAGAAGAAATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS TCA 90 bp ATCAGTAAAGGAATGAAGAACCACAAAAATGGGATCATTGGCGGCTaGATGTGGCAAAGCGTTTGTCCCGTTCAGGAAGGAATGAACCAA +
Preference number: 5 (lower is better)
Translates to: ISKGMKNHKNGIIGG*MWQSVCPVQEGMNQ
Trigger: TTGGTTCATTCCTTCCTGAACGGGACAAACGCTTTGCCACATTCAGCCGCCAATGATCCCATTTTTGTGGTTCTTCATTCCTTTACTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS TCA 90 bp AAGCAAACGATTAGAAATCACCACAAAAATGGGATCATTGGCGGCTaGATGTGGCAAAGCGTTTGTCCCGTTCAGGAAGGAATGAACCAA +
Preference number: 5 (lower is better)
Translates to: KQTIRNHHKNGIIGG*MWQSVCPVQEGMNQ
Trigger: TTGGTTCATTCCTTCCTGAACGGGACAAACGCTTTGCCACATTCAGCCGCCAATGATCCCATTTTTGTGGTGATTTCTAATCGTTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446125.1
CDS TCA 90 bp AGGTCAGAGAGGGCTTCCATGGCCAGATTCGCAAATATTTTCTTCTaGAATCAAAAGGAATTCGCCTCCACCTCACCAACTCACATCTTT +
Preference number: 5 (lower is better)
Translates to: RSERASMARFANIFF*NQKEFASTSPTHIF
Trigger: AAAGATGTGAGTTGGTGAGGTGGAGGCGAATTCCTTTTGATTTCAGAAGAAAATATTTGCGAATCTGGCCATGGAAGCCCTCTCTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS TCA 90 bp GCAAGGTTTCAAATTCTCAGAACCCAACAACGAGAGGGTATCAATTaGAGGGGAACAAGTGATGAGCAGAAGGATGAACCTGTCCAAATC +
Preference number: 5 (lower is better)
Translates to: ARFQILRTQQREGIN*RGTSDEQKDEPVQI
Trigger: GATTTGGACAGGTTCATCCTTCTGCTCATCACTTGTTCCCCTTCAATTGATACCCTCTCGTTGTTGGGTTCTGAGAATTTGAAACCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472871.1
ENST00000490854.1
CDS-3UTR CAA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGGCCCAGCCAGTGTaGTGTGGTGATCACGTAGTC +
Preference number: 5 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKEQAQPV*CGDHVV
Trigger: GACTACGTGATCACCACACAACACTGGCTGGGCCTG...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp AAAGCCACCAGTGTTCCCATGACTACTAAGAGAGTTGTGGGCCAACCTGGAGTTGTATGTCTTTTAAGGTaGGCAATTTCATGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: KATSVPMTTKRVVGQPGVVCLLR*AISCCF
Trigger: GAAACAGCATGAAATTGCCAACCTTAAAAGACATAC...AACTCCAGGTTGGCCCACAACTCTCTTAGTAGTCATGGGAACACTGGTGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS-3UTR CAA 90 bp ATGAAATTTGCCTGGAAATCTCAAGAGCCATTAACTTCTCTGAAGTGGGGTCCATGGAAGAAGGGAGGATaGTCAAACTTCTGGAGAGAC +
Preference number: 5 (lower is better)
Translates to: MKFAWKSQEPLTSLKWGPWKKGG*SNFWRD
Trigger: GTCTCTCCAGAAGTTTGACAATCCTCCCTTCTTCCA...TGGACCCCACTTCAGAGAAGTTAATGGCTCTTGAGATTTCCAGGCAAATTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp TTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGTTTGTTAAACAAGCAAGCAATGTGGCAAAGCGTTaGTCCCGTTCAGGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: LKVEVASSTLVGFVKQASNVAKR*SRSGRN
Trigger: ATTCCTTCCTGAACGGGACAAACGCTTTGCCACATT...GCTTGCTTGTTTAACAAACCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS TCA 90 bp AGCGCTTCTCACCATCTTCCCCCGTTAAGTCAGGCTTTGTCTAATTaGGTTAATTTACAGAGCACCCAGTCATACTACTTATTATGCTGG +
Preference number: 5 (lower is better)
Translates to: SASHHLPPLSQALSN*VNLQSTQSYYLLCW
Trigger: CCAGCATAATAAGTAGTATGACTGGGTGCTCTGTAAATTAACTCAATTAGACAAAGCCTGACTTAACGGGGGAAGATGGTGAGAAGCGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS-3UTR CAA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGAAAGCAAAAGACTCATaGCCAATGAGTCGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGKAKDS*PMSRWR
Trigger: TCTCCAGCGACTCATTGGCAATGAGTCTTTTGCTTT...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATGAAGGCTCATCACTaGAGAATCCAGAGTCCCATC +
Preference number: 5 (lower is better)
Translates to: VKQASKAETTAKHLLNEIMKAHH*RIQSPI
Trigger: GATGGGACTCTGGATTCTCAAGTGATGAGCCTTCAT...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTACAAAAATGGGATCATaGGCGGCTGAATGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: ASKAETTAKHLLNEIIITTKMGS*AAECGK
Trigger: TTTGCCACATTCAGCCGCCAATGATCCCATTTTTGT...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS GCA 90 bp CACTCCCAACATGAGCACTCTAATTCCGCACAAAGAAGCTTCATGTaGCTTAGCACATGTTCAGTTAATTCCTCTAATTTGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: HSQHEHSNSAQRSFM*LSTCSVNSSNLEKR
Trigger: CCTTTTCTCCAAATTAGAGGAATTAACTGAACATGTGCTAAGGCACATGAAGCTTCTTTGTGCGGAATTAGAGTGCTCATGTTGGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS-3UTR CAA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTCAGGTCTATCTTTATTaGAAGGTAGAGGTAGCCTCA +
Preference number: 5 (lower is better)
Translates to: ASKAETTAKHLLNEIIITQVYLY*KVEVAS
Trigger: TGAGGCTACCTCTACCTTCAAATAAAGATAGACCTG...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp TGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGCAGGTCTATCTTTATTaGAAGGTAGAGGTAGCCTCA +
Preference number: 5 (lower is better)
Translates to: CQVYLYLKVEVASSTLVGQVYLY*KVEVAS
Trigger: TGAGGCTACCTCTACCTTCAAATAAAGATAGACCTG...CCCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTCTTTACCGGGCTATCTaGATCTTCACCACTGAGCCT +
Preference number: 5 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSLYRAI*IFTTEP
Trigger: AGGCTCAGTGGTGAAGATCAAGATAGCCCGGTAAAG...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS TCA 90 bp CTCCAAGAAACCTGGGGATTCCGGACCATGCAGGAGTACCATAAATaGTTATCTGAAAGTCTATCATGTGATAGACTGTCTAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: LQETWGFRTMQEYHK*LSESLSCDRLSKIH
Trigger: ATGGATTTTAGACAGTCTATCACATGATAGACTTTCAGATAATCATTTATGGTACTCCTGCATGGTCCGGAATCCCCAGGTTTCTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS GCA 90 bp GGAGAGACAGGCAATCTCGTATGTCTTTTAAGGTTGGCAATTTCATaGTGTTTCTTCCCATTTGATTTCTTCTCAGCAAACCTTCATAGG +
Preference number: 5 (lower is better)
Translates to: GETGNLVCLLRLAIS*CFFPFDFFSANLHR
Trigger: CCTATGAAGGTTTGCTGAGAAGAAATCAAATGGGAAGAAACAGCATGAAATTGCCAACCTTAAAAGACATACGAGATTGCCTGTCTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS GCA 90 bp AACCAAATTATGAAGGCTCATCACTTGAGAATCCAGAGTCCCATCTaGTTTATCAAACCCTTCCAAAGCATTCCTGAAACTGAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: NQIMKAHHLRIQSPI*FIKPFQSIPETEGR
Trigger: TCTACCTTCAGTTTCAGGAATGCTTTGGAAGGGTTTGATAAAGCAGATGGGACTCTGGATTCTCAAGTGATGAGCCTTCATAATTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGCTGTTTCTTCCCATTaGATTTCTTCTCAGCAAACC +
Preference number: 5 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWAVSSH*ISSQQT
Trigger: GGTTTGCTGAGAAGAAATCAAATGGGAAGAAACAGC...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGTGGAAGAAGGGAGGATaGTCAAACTTCTGGAGAGAC +
Preference number: 5 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSEWKKGG*SNFWRD
Trigger: GTCTCTCCAGAAGTTTGACAATCCTCCCTTCTTCCA...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGAATGTGGCAAAGCGTTaGTCCCGTTCAGGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSENVAKR*SRSGRN
Trigger: ATTCCTTCCTGAACGGGACAAACGCTTTGCCACATT...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGTCTTCTGTGTATCTCTaGCTGCTTAAATGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWSSVYL*LLKCVS
Trigger: GGAGACACATTTAAGCAGCAAGAGATACACAGAAGA...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp GTTAAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCTCTTCTGTGTATCTCTaGCTGCTTAAATGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: VKQASKAETTAKHLLNEISSVYL*LLKCVS
Trigger: GGAGACACATTTAAGCAGCAAGAGATACACAGAAGA...GATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp GCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCATCACTTTCAGTCAGCCTTCCTaGGAAAGAGTAATTCTGTAT +
Preference number: 5 (lower is better)
Translates to: ASKAETTAKHLLNEIIITFSQPS*ERVILY
Trigger: ATACAGAATTACTCTTTCCAAGGAAGGCTGACTGAA...AGTGATGATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp TTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTGGGGGACTCAAGTCAAATaGTCTCATGTTCAGGTTTAC +
Preference number: 5 (lower is better)
Translates to: LSGLSLFEGRGSLKHFSWGTQVK*SHVQVY
Trigger: GTAAACCTGAACATGAGACAATTTGACTTGAGTCCC...CCAACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGAGGGAAGGGAGTTCCTaGGTCGCTTTCTCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSEREGSS*VAFSFL
Trigger: AAGAAAAGAGAAAGCGACCAAGGAACTCCCTTCCCT...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446125.1
CDS TCA 90 bp TTTCGCGTATTTTGCCTCACCCATCAATCTGTTATAACTACTAGCTaGCAAGCATGTTCGCTGAGACCAGAAGAGAGAAAAATACATTCA +
Preference number: 5 (lower is better)
Translates to: FRVFCLTHQSVITTS*QACSLRPEERKIHS
Trigger: TGAATGTATTTTTCTCTCTTCTGGTCTCAGCGAACATGCTTGTCAGCTAGTAGTTATAACAGATTGATGGGTGAGGCAAAATACGCGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS-3UTR CAA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGAAAGCAAAAGACTCATaGCCAATGAGTCGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSEKAKDS*PMSRWR
Trigger: TCTCCAGCGACTCATTGGCAATGAGTCTTTTGCTTT...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp ATGAAATTTGCCTGGAAATCTCAAGAGCCATTAACTTCTCTGAAGTGGGGTCCAGTATGTCTTTTAAGGTaGGCAATTTCATGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: MKFAWKSQEPLTSLKWGPVCLLR*AISCCF
Trigger: GAAACAGCATGAAATTGCCAACCTTAAAAGACATAC...TGGACCCCACTTCAGAGAAGTTAATGGCTCTTGAGATTTCCAGGCAAATTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGGGATTAGTTCCTTTATaGTCAGCGTCAGAACTGTGG +
Preference number: 5 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSEGLVPL*SASELW
Trigger: CCACAGTTCTGACGCTGACAATAAAGGAACTAATCC...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAGCTTTAGCAGTCCTTTaGCATGGGGTAAACTGGTTC +
Preference number: 5 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSALAVL*HGVNWF
Trigger: GAACCAGTTTACCCCATGCAAAAGGACTGCTAAAGC...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp AATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTAGTTCCAACTGGGCTTaGTCCATTTCTCTGGCTTTA +
Preference number: 5 (lower is better)
Translates to: NCQVYLYLKVEVASSTLVSSNWA*SISLAL
Trigger: TAAAGCCAGAGAAATGGACAAAGCCCAGTTGGAACT...AACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAAAGCAAAAGACTCATaGCCAATGAGTCGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSKAKDS*PMSRWR
Trigger: TCTCCAGCGACTCATTGGCAATGAGTCTTTTGCTTT...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTGCTGTTTCTTCCCATTaGATTTCTTCTCAGCAAACC +
Preference number: 5 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSAVSSH*ISSQQT
Trigger: GGTTTGCTGAGAAGAAATCAAATGGGAAGAAACAGC...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTTCTTCTGTGTATCTCTaGCTGCTTAAATGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSSSVYL*LLKCVS
Trigger: GGAGACACATTTAAGCAGCAAGAGATACACAGAAGA...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp AAACAAGCAAGCAAAGCGGAAACTACAGCTAAGCATCTTCTGAATGAGATCATCCTGAATTGTCATGTTTaGTACAGATGGTTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: KQASKAETTAKHLLNEIILNCHV*YRWFAF
Trigger: GAAAGCAAACCATCTGTACAAAACATGACAATTCAG...GATGATCTCATTCAGAAGATGCTTAGCTGTAGTTTCCGCTTTGCTTGCTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp ATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAACAGTGAGTTCTTCCCCCTATCATaGAGAAATATAGCCCACAGT +
Preference number: 5 (lower is better)
Translates to: ITIEEPMSKIFNSRRNSEFFPLS*RNIAHS
Trigger: ACTGTGGGCTATATTTCTCAATGATAGGGGGAAGAA...CTCACTGTTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAGCTGTTTCTTCCCATTaGATTTCTTCTCAGCAAACC +
Preference number: 5 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSAVSSH*ISSQQT
Trigger: GGTTTGCTGAGAAGAAATCAAATGGGAAGAAACAGC...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS-3UTR CAA 90 bp GATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCAAGAAGGAAAGAGTCTCCAACAAATaGACCCATCTTGAAGGCTTA +
Preference number: 5 (lower is better)
Translates to: DHHHYRRTYVKDLQLKKERVSNK*THLEGL
Trigger: TAAGCCTTCAAGATGGGTCAATTTGTTGGAGACTCT...TTCCTTCTTGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS-3UTR CAA 90 bp CTGAATGAGATCATCATCACTATAGAAGAACCTATGTCAAAGATCTTCAACTCATCTCTCTTACTTTCCTaGTCTCTGTCGTACTTTTCT +
Preference number: 5 (lower is better)
Translates to: LNEIIITIEEPMSKIFNSSLLLS*SLSYFS
Trigger: AGAAAAGTACGACAGAGACAAGGAAAGTAAGAGAGA...TGAGTTGAAGATCTTTGACATAGGTTCTTCTATAGTGATGATGATCTCATTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377028.10
ENST00000446125.1
CDS-3UTR CAA 90 bp AAATTGTCAGGTCTATCTTTATTTGAAGGTAGAGGTAGCCTCAAGCACTTTAGTGTATGTCTTTTAAGGTaGGCAATTTCATGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: KLSGLSLFEGRGSLKHFSVCLLR*AISCCF
Trigger: GAAACAGCATGAAATTGCCAACCTTAAAAGACATAC...ACTAAAGTGCTTGAGGCTACCTCTACCTTCAAATAAAGATAGACCTGACAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS TCA 72 bp TCGGCTCGCACCTCTGTGCACTGCCCCCGGCCTTGCTaGGAGCCACAGACATTGGCCGACTCTGCACCCAGG +
Preference number: 6 (lower is better)
Translates to: SARTSVHCPRPC*EPQTLADSAPR
Trigger: CCTGGGTGCAGAGTCGGCCAATGTCTGTGGCTCTCAGCAAGGCCGGGGGCAGTGCACAGAGGTGCGAGCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CCA 72 bp TGCACTGCCCCCGGCCTTGCTGAGAGCCACAGACATTaGCCGACTCTGCACCCAGGCGTGGGCAGCACTCCT +
Preference number: 6 (lower is better)
Translates to: CTAPGLAESHRH*PTLHPGVGSTP
Trigger: AGGAGTGCTGCCCACGCCTGGGTGCAGAGTCGGCCAATGTCTGTGGCTCTCAGCAAGGCCGGGGGCAGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS GCA 72 bp GACCACTCCAGGGCCTTGTGTCGGCTCGCACCTCTGTaGACTGCCCCCGGCCTTGCTGAGAGCCACAGACAT +
Preference number: 6 (lower is better)
Translates to: DHSRALCRLAPL*TAPGLAESHRH
Trigger: ATGTCTGTGGCTCTCAGCAAGGCCGGGGGCAGTGCACAGAGGTGCGAGCCGACACAAGGCCCTGGAGTGGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CAA 72 bp CCTGGTTTCGTAGGATGTAGGGACCACTCCAGGGCCTaGTGTCGGCTCGCACCTCTGTGCACTGCCCCCGGC +
Preference number: 6 (lower is better)
Translates to: PGFVGCRDHSRA*CRLAPLCTAPG
Trigger: GCCGGGGGCAGTGCACAGAGGTGCGAGCCGACACAAGGCCCTGGAGTGGTCCCTACATCCTACGAAACCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CAA 90 bp CACGGTCATCCTGGTTTCGTAGGATGTAGGGACCACTCCAGGGCCTaGTGTCGGCTCGCACCTCTGTGCACTGCCCCCGGCCTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: HGHPGFVGCRDHSRA*CRLAPLCTAPGLAE
Trigger: CTCAGCAAGGCCGGGGGCAGTGCACAGAGGTGCGAGCCGACACAAGGCCCTGGAGTGGTCCCTACATCCTACGAAACCAGGATGACCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS GCA 72 bp GGCAGCACTCCTTGTTCACTAGGCTGTCCACCGTCATaGAGACTCGGGGGAACTGACCCTGGGCTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: GSTPCSLGCPPS*RLGGTDPGLLA
Trigger: TGCCAGGAGCCCAGGGTCAGTTCCCCCGAGTCTGCATGACGGTGGACAGCCTAGTGAACAAGGAGTGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS TCA 72 bp ACTAGGCTGTCCACCGTCATGCAGACTCGGGGGAACTaGCCCTGGGCTCCTGGCAGGATTTTGCAGCCCAAG +
Preference number: 6 (lower is better)
Translates to: TRLSTVMQTRGN*PWAPGRILQPK
Trigger: CTTGGGCTGCAAAATCCTGCCAGGAGCCCAGGGTCAGTTCCCCCGAGTCTGCATGACGGTGGACAGCCTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CAA 90 bp AAACTGCGGCTGGGTTCCATTGGGCCCAAGCAGGCCCAGCCAGTGTaGTGTGGTGATCACGTAGTCGGGGTGTACTCTCTTCTTCGCGAG +
Preference number: 6 (lower is better)
Translates to: KLRLGSIGPKQAQPV*CGDHVVGVYSLLRE
Trigger: CTCGCGAAGAAGAGAGTACACCCCGACTACGTGATCACCACACAACACTGGCTGGGCCTGCTTGGGCCCAATGGAACCCAGCCGCAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS TCA 72 bp CATTGGGCCCAAGCAGGCCCAGCCAGTGTTGTGTGGTaGTCACGTAGTCGGGGTGTACTCTCTTCTTCGCGA +
Preference number: 6 (lower is better)
Translates to: HWAQAGPASVVW*SRSRGVLSSSR
Trigger: TCGCGAAGAAGAGAGTACACCCCGACTACGTGATCACCACACAACACTGGCTGGGCCTGCTTGGGCCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CCA 72 bp AGGACTCAAGGAATGGATGTTCTGCCGAATCACTGGTaGTTTCTTCCGCTCGCAGTTGGGACCGGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RTQGMDVLPNHW*FLPLAVGTGPA
Trigger: GGCTGGACCGGTCCCAACTGCGAGCGGAAGAAACCACCAGTGATTCGGCAGAACATCCATTCCTTGAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CCA 72 bp AGAGTCGGATCGTCTGGTCTCGCTGCCCCAAACAGCTaGTCTGTACACACATCACACTCGTTCCTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: RVGSSGLAAPNS*SVHTSHSFLPV
Trigger: CACTGGGAGGAACGAGTGTGATGTGTGTACAGACCAGCTGTTTGGGGCAGCGAGACCAGACGATCCGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
ENST00000483392.6
ENST00000490854.1
CDS CCA 72 bp TCTGCCGAATCACTGGTGGTTTCTTCCGCTCGCAGTTaGGACCGGTCCAGCCAAACTTGCAGTCTCCACAAT +
Preference number: 6 (lower is better)
Translates to: SAESLVVSSARS*DRSSQTCSLHN
Trigger: ATTGTGGAGACTGCAAGTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGAAACCACCAGTGATTCGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CCA 72 bp CTGAGGACTCAAGGAATGGATGTTCTGCCGAATCACTaGTGGTTTCTTCCGCTCGCAGTTGGGACCGGTCCA +
Preference number: 6 (lower is better)
Translates to: LRTQGMDVLPNH*WFLPLAVGTGP
Trigger: TGGACCGGTCCCAACTGCGAGCGGAAGAAACCACCAGTGATTCGGCAGAACATCCATTCCTTGAGTCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CAA 72 bp TTCTGCCGAATCACTGGTGGTTTCTTCCGCTCGCAGTaGGGACCGGTCCAGCCAAACTTGCAGTCTCCACAA +
Preference number: 6 (lower is better)
Translates to: FCRITGGFFRSQ*GPVQPNLQSPQ
Trigger: TTGTGGAGACTGCAAGTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGAAACCACCAGTGATTCGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS GCA 72 bp TCTTCCGCTCGCAGTTGGGACCGGTCCAGCCAAACTTaGAGTCTCCACAATTATAGCCGGCAAAGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: SSARSWDRSSQT*SLHNYSRQSFL
Trigger: CAGGAAACTTTGCCGGCTATAATTGTGGAGACTGCAAGTTTGGCTGGACCGGTCCCAACTGCGAGCGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS GCA 72 bp GTTCCGACTAATCAGAGTCGGATCGTCTGGTCTCGCTaGCCCAAACAGCTGGTCTGTACACACATCACACTC +
Preference number: 6 (lower is better)
Translates to: VPTNQSRIVWSR*PKQLVCTHITL
Trigger: GAGTGTGATGTGTGTACAGACCAGCTGTTTGGGGCAGCGAGACCAGACGATCCGACTCTGATTAGTCGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
ENST00000483392.6
ENST00000490854.1
CDS GCA 72 bp GGGGAGAGGTGCACGTGCAGCCATGCATTCAAGAACTaGTATGGGAAGAATCTAGGATGGAGTCAAGCCCTC +
Preference number: 6 (lower is better)
Translates to: GERCTCSHAFKN*YGKNLGWSQAL
Trigger: GAGGGCTTGACTCCATCCTAGATTCTTCCCATAGCAGTTCTTGAATGCATGGCTGCACGTGCACCTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472871.1
ENST00000490854.1
CDS CAA 90 bp CGGCAAAGTTTCCTGTGCACTTGCAGGTCCGGTGGAAGAATTTTCTaGGCCACAGCTCACGGTCATCCTGGTTTCGTAGGATGTAGGGAC +
Preference number: 6 (lower is better)
Translates to: RQSFLCTCRSGGRIF*ATAHGHPGFVGCRD
Trigger: GTCCCTACATCCTACGAAACCAGGATGACCGTGAGCTGTGGCCAAGAAAATTCTTCCACCGGACCTGCAAGTGCACAGGAAACTTTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CCA 72 bp GAGGTGCACGTGCAGCCATGCATTCAAGAACTGCTATaGGAAGAATCTAGGATGGAGTCAAGCCCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: EVHVQPCIQELL*EESRMESSPPG
Trigger: TCCAGGAGGGCTTGACTCCATCCTAGATTCTTCCCATAGCAGTTCTTGAATGCATGGCTGCACGTGCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472871.1
ENST00000490854.1
CDS CAA 72 bp TTCCTGTGCACTTGCAGGTCCGGTGGAAGAATTTTCTaGGCCACAGCTCACGGTCATCCTGGTTTCGTAGGA +
Preference number: 6 (lower is better)
Translates to: FLCTCRSGGRIF*ATAHGHPGFVG
Trigger: TCCTACGAAACCAGGATGACCGTGAGCTGTGGCCAAGAAAATTCTTCCACCGGACCTGCAAGTGCACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS TCA 72 bp GCGAGATCTAAGGCGCCCAAGAACTGCTCTCTTTCCTaGGGACTCAAGGAATGGATGTTCTGCCGAATCACT +
Preference number: 6 (lower is better)
Translates to: ARSKAPKNCSLS*GLKEWMFCRIT
Trigger: AGTGATTCGGCAGAACATCCATTCCTTGAGTCCTCAGGAAAGAGAGCAGTTCTTGGGCGCCTTAGATCTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS TCA 72 bp CAAGCTATCACAGACAGTTTCCCAGCTGGAGAATCTTaGGTTCCGACTAATCAGAGTCGGATCGTCTGGTCT +
Preference number: 6 (lower is better)
Translates to: QAITDSFPAGES*VPTNQSRIVWS
Trigger: AGACCAGACGATCCGACTCTGATTAGTCGGAACTCAAGATTCTCCAGCTGGGAAACTGTCTGTGATAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
ENST00000490854.1
CDS TCA 72 bp GGAATGAAGAACCACAAAAATGGGATCATTGGCGGCTaGATGTGGCAAAGCGTTTGTCCCGTTCAGGAAGGA +
Preference number: 6 (lower is better)
Translates to: GMKNHKNGIIGG*MWQSVCPVQEG
Trigger: TCCTTCCTGAACGGGACAAACGCTTTGCCACATTCAGCCGCCAATGATCCCATTTTTGTGGTTCTTCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS CAA 90 bp CTCCTCCATGTCTCAGACATCAGAAAAGACAATCTCTGGATGCCATaGCAGGTACAGGAGCCATTACCTATCACAGACAGTTTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: LLHVSDIRKDNLWMP*QVQEPLPITDSFPA
Trigger: AGCTGGGAAACTGTCTGTGATAGGTAATGGCTCCTGTACCTGCAATGGCATCCAGAGATTGTCTTTTCTGATGTCTGAGACATGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CAA 90 bp TGGAAGGGCAGGTCACCAATTTCTCAAGCATCCAACATGACTGTGTaGCAAAGAGCTAAGCAGCAGAAACTCTACATTGCTGTGGCTAAG +
Preference number: 6 (lower is better)
Translates to: WKGRSPISQASNMTV*QRAKQQKLYIAVAK
Trigger: CTTAGCCACAGCAATGTAGAGTTTCTGCTGCTTAGCTCTTTGCAACACAGTCATGTTGGATGCTTGAGAAATTGGTGACCTGCCCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS TCA 72 bp TTACCTATCACAGACAGTTTCCCAGCTGGAGAATCTTaGGTTCCGACTAATCAGAGTCGGATCGTCTGGTCT +
Preference number: 6 (lower is better)
Translates to: LPITDSFPAGES*VPTNQSRIVWS
Trigger: AGACCAGACGATCCGACTCTGATTAGTCGGAACTCAAGATTCTCCAGCTGGGAAACTGTCTGTGATAGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CCA 72 bp ATTCCAAGTCCTACCCAGCCCCCAATTTTTAAGACTTaGAAGGGCAGGTCACCAATTTCTCAAGCATCCAAC +
Preference number: 6 (lower is better)
Translates to: IPSPTQPPIFKT*KGRSPISQASN
Trigger: GTTGGATGCTTGAGAAATTGGTGACCTGCCCTTCCAAGTCTTAAAAATTGGGGGCTGGGTAGGACTTGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CAA 90 bp GAACCACAAAAATGGGATCATTGGCGGCTGAATGTGGCAAAGCGTTaGTCCCGTTCAGGAAGGAATGAACCAAATTATGAAGGCTCATCA +
Preference number: 6 (lower is better)
Translates to: EPQKWDHWRLNVAKR*SRSGRNEPNYEGSS
Trigger: TGATGAGCCTTCATAATTTGGTTCATTCCTTCCTGAACGGGACAAACGCTTTGCCACATTCAGCCGCCAATGATCCCATTTTTGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377028.10
CDS CAA 90 bp TCACCACAAAAATGGGATCATTGGCGGCTGAATGTGGCAAAGCGTTaGTCCCGTTCAGGAAGGAATGAACCAAATTATGAAGGCTCATCA +
Preference number: 6 (lower is better)
Translates to: SPQKWDHWRLNVAKR*SRSGRNEPNYEGSS
Trigger: TGATGAGCCTTCATAATTTGGTTCATTCCTTCCTGAACGGGACAAACGCTTTGCCACATTCAGCCGCCAATGATCCCATTTTTGTGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446125.1
CDS TCA 72 bp TTCTCAGCAAACCTTCATAGGTTCCATTGCACAAGGTaGCCAGGTGGTTGTAGTCATCCAAGCTATCACAGA +
Preference number: 6 (lower is better)
Translates to: FSANLHRFHCTR*PGGCSHPSYHR
Trigger: TCTGTGATAGCTTGGATGACTACAACCACCTGGTCACCTTGTGCAATGGAACCTATGAAGGTTTGCTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
ENST00000490854.1
CDS TCA 72 bp ATTAGAAATCACCACAAAAATGGGATCATTGGCGGCTaGATGTGGCAAAGCGTTTGTCCCGTTCAGGAAGGA +
Preference number: 6 (lower is better)
Translates to: IRNHHKNGIIGG*MWQSVCPVQEG
Trigger: TCCTTCCTGAACGGGACAAACGCTTTGCCACATTCAGCCGCCAATGATCCCATTTTTGTGGTGATTTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446125.1
CDS CCA 72 bp CCTTCCAAAGCATTCCTGAAACTGAAGGTAGAGTTCTaGAAGAAGGGAGGATTGTCAAACTTCTGGAGAGAC +
Preference number: 6 (lower is better)
Translates to: PSKAFLKLKVEF*KKGGLSNFWRD
Trigger: GTCTCTCCAGAAGTTTGACAATCCTCCCTTCTTCCAGAACTCTACCTTCAGTTTCAGGAATGCTTTGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS CAA 72 bp AGCAAACGATTAGAAATCACCACAAAAATGGGATCATaGGCGGCTGAATGTGGCAAAGCGTTTGTCCCGTTC +
Preference number: 6 (lower is better)
Translates to: SKRLEITTKMGS*AAECGKAFVPF
Trigger: GAACGGGACAAACGCTTTGCCACATTCAGCCGCCAATGATCCCATTTTTGTGGTGATTTCTAATCGTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446125.1
CDS CAA 72 bp GTCTCAGACATCAGAAAAGACAATCTCTGGATGCCATaGCAGGTACAGGAGCCATTACCTATCACAGACAGT +
Preference number: 6 (lower is better)
Translates to: VSDIRKDNLWMP*QVQEPLPITDS
Trigger: ACTGTCTGTGATAGGTAATGGCTCCTGTACCTGCAATGGCATCCAGAGATTGTCTTTTCTGATGTCTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CAA 72 bp CTCATGGTTACCAGCACATGCAGGGAAGGGAGTTCCTaGGTCGCTTTCTCTTTTCACAAAAATGGGATCATT +
Preference number: 6 (lower is better)
Translates to: LMVTSTCREGSS*VAFSFHKNGII
Trigger: AATGATCCCATTTTTGTGAAAAGAGAAAGCGACCAAGGAACTCCCTTCCCTGCATGTGCTGGTAACCATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS CAA 90 bp TGTCCCGTTCAGGAAGGAATGAACCAAATTATGAAGGCTCATCACTaGAGAATCCAGAGTCCCATCTGCTTTATCAAACCCTTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: CPVQEGMNQIMKAHH*RIQSPICFIKPFQS
Trigger: GCTTTGGAAGGGTTTGATAAAGCAGATGGGACTCTGGATTCTCAAGTGATGAGCCTTCATAATTTGGTTCATTCCTTCCTGAACGGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS TCA 72 bp CAAATTCTCAGAACCCAACAACGAGAGGGTATCAATTaGAGGGGAACAAGTGATGAGCAGAAGGATGAACCT +
Preference number: 6 (lower is better)
Translates to: QILRTQQREGIN*RGTSDEQKDEP
Trigger: AGGTTCATCCTTCTGCTCATCACTTGTTCCCCTTCAATTGATACCCTCTCGTTGTTGGGTTCTGAGAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472871.1
ENST00000490854.1
CDS CAA 72 bp AAATGGGATCATTGGCGGCTGAATGTGGCAAAGCGTTaGTCCCGTTCAGGAAGGAATGAACCAAATTATGAA +
Preference number: 6 (lower is better)
Translates to: KWDHWRLNVAKR*SRSGRNEPNYE
Trigger: TTCATAATTTGGTTCATTCCTTCCTGAACGGGACAAACGCTTTGCCACATTCAGCCGCCAATGATCCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS CAA 72 bp CCTGTCCAAATCAGAATCTTGCTCTTCAAAGTGAGCTaGATGTCTTCATTCATCCTGACCCCAATGAAGGAC +
Preference number: 6 (lower is better)
Translates to: PVQIRILLFKVS*MSSFILTPMKD
Trigger: GTCCTTCATTGGGGTCAGGATGAATGAAGACATCAAGCTCACTTTGAAGAGCAAGATTCTGATTTGGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472871.1
ENST00000490854.1
CDS CAA 90 bp TTTTCACAAAAATGGGATCATTGGCGGCTGAATGTGGCAAAGCGTTaGTCCCGTTCAGGAAGGAATGAACCAAATTATGAAGGCTCATCA +
Preference number: 6 (lower is better)
Translates to: FSQKWDHWRLNVAKR*SRSGRNEPNYEGSS
Trigger: TGATGAGCCTTCATAATTTGGTTCATTCCTTCCTGAACGGGACAAACGCTTTGCCACATTCAGCCGCCAATGATCCCATTTTTGTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483392.6
CDS TCA 72 bp ACCTGGGGATTCCGGACCATGCAGGAGTACCATAAATaGTTATCTGAAAGTCTATCATGTGATAGACTGTCT +
Preference number: 6 (lower is better)
Translates to: TWGFRTMQEYHK*LSESLSCDRLS
Trigger: AGACAGTCTATCACATGATAGACTTTCAGATAATCATTTATGGTACTCCTGCATGGTCCGGAATCCCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CAA 72 bp CAGGAAGGAATGAACCAAATTATGAAGGCTCATCACTaGAGAATCCAGAGTCCCATCTGCTTTATCAAACCC +
Preference number: 6 (lower is better)
Translates to: QEGMNQIMKAHH*RIQSPICFIKP
Trigger: GGGTTTGATAAAGCAGATGGGACTCTGGATTCTCAAGTGATGAGCCTTCATAATTTGGTTCATTCCTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS CAA 72 bp AGGTCACCAATTTCTCAAGCATCCAACATGACTGTGTaGCAAAGAGCTAAGCAGCAGAAACTCTACATTGCT +
Preference number: 6 (lower is better)
Translates to: RSPISQASNMTV*QRAKQQKLYIA
Trigger: AGCAATGTAGAGTTTCTGCTGCTTAGCTCTTTGCAACACAGTCATGTTGGATGCTTGAGAAATTGGTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CCA 72 bp TGCAAAGAGCTAAGCAGCAGAAACTCTACATTGCTGTaGCTAAGCTTGTACTTTTCCTTGACAATAAAGCTC +
Preference number: 6 (lower is better)
Translates to: CKELSSRNSTLL*LSLYFSLTIKL
Trigger: GAGCTTTATTGTCAAGGAAAAGTACAAGCTTAGCCACAGCAATGTAGAGTTTCTGCTGCTTAGCTCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CAA 90 bp TCATGGCTTTATAATTGGGAGAGCTCTCTCTCTCTCTTACTTTCCTaGTCTCTGTCGTACTTTTCTCCTTATCTTCTACTCTTTCAGTCT +
Preference number: 6 (lower is better)
Translates to: SWLYNWESSLSLLLS*SLSYFSPYLLLFQS
Trigger: AGACTGAAAGAGTAGAAGATAAGGAGAAAAGTACGACAGAGACAAGGAAAGTAAGAGAGAGAGAGAGCTCTCCCAATTATAAAGCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000472871.1
CDS CAA 90 bp TGTCAAACTTCTGGAGAGACAGGCAATCTCGTATGTCTTTTAAGGTaGGCAATTTCATGCTGTTTCTTCCCATTTGATTTCTTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: CQTSGETGNLVCLLR*AISCCFFPFDFFSA
Trigger: TGCTGAGAAGAAATCAAATGGGAAGAAACAGCATGAAATTGCCAACCTTAAAAGACATACGAGATTGCCTGTCTCTCCAGAAGTTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS GCA 72 bp CATGAGCACTCTAATTCCGCACAAAGAAGCTTCATGTaGCTTAGCACATGTTCAGTTAATTCCTCTAATTTG +
Preference number: 6 (lower is better)
Translates to: HEHSNSAQRSFM*LSTCSVNSSNL
Trigger: CAAATTAGAGGAATTAACTGAACATGTGCTAAGGCACATGAAGCTTCTTTGTGCGGAATTAGAGTGCTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CCA 72 bp CCTCTAATTTGGAGAAAAGGTCAGAGAGGGCTTCCATaGCCAGATTCGCAAATATTTTCTTCTGAAATCAAA +
Preference number: 6 (lower is better)
Translates to: PLIWRKGQRGLP*PDSQIFSSEIK
Trigger: TTTGATTTCAGAAGAAAATATTTGCGAATCTGGCCATGGAAGCCCTCTCTGACCTTTTCTCCAAATTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472871.1
CDS CAA 72 bp TCTGGAGAGACAGGCAATCTCGTATGTCTTTTAAGGTaGGCAATTTCATGCTGTTTCTTCCCATTTGATTTC +
Preference number: 6 (lower is better)
Translates to: SGETGNLVCLLR*AISCCFFPFDF
Trigger: GAAATCAAATGGGAAGAAACAGCATGAAATTGCCAACCTTAAAAGACATACGAGATTGCCTGTCTCTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377028.10
ENST00000446125.1
ENST00000483392.6
CDS CAA 90 bp TCTGAAATCAAAAGGAATTCGCCTCCACCTCACCAACTCACATCTTaGATGATTAACAGCTTCACAGAGAAAAGTTTACACTTTGAACCA +
Preference number: 6 (lower is better)
Translates to: SEIKRNSPPPHQLTS*MINSFTEKSLHFEP
Trigger: TGGTTCAAAGTGTAAACTTTTCTCTGTGAAGCTGTTAATCATCAAAGATGTGAGTTGGTGAGGTGGAGGCGAATTCCTTTTGATTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472871.1