RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCST1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163357

Ensembl transcript IDs: ENST00000295542.6, ENST00000368419.2, ENST00000368420.1, ENST00000423025.6, ENST00000525273.5

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTCCATCACTGTCTCTaGGGAGGTGTTCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: SSIGHCRGTGSASSLGMLFHHCL*GGVQGP
Trigger: GGGGCCCTGAACACCTCCTCAGAGACAGTGATGGAA...CAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
3UTR-3UTR CCA 90 bp TTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGGAAGCCGGGCTAGCATaGAGTCTCCCCCGACCTTCA +
Preference number: 2 (lower is better)
Translates to: FSSIGHCRGTGSASSLGMEAGLA*SLPRPS
Trigger: TGAAGGTCGGGGGAGACTCCATGCTAGCCCGGCTTC...CATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
3UTR-3UTR CCA 90 bp CTCTTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCTGTTCAGGGCCCCAATaGTTTTTCGAAGAAGCCGGG +
Preference number: 2 (lower is better)
Translates to: LFSSIGHCRGTGSASSLGCSGPQ*FFEEAG
Trigger: CCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA...GCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525273.5
3UTR CCA 72 bp CCATCACTGTCTCTGAGGAGGTGTTCAGGGCCCCAATaGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTC +
Preference number: 3 (lower is better)
Translates to: PSLSLRRCSGPQ*FFEEAGLAWSL
Trigger: GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCTCAGAGACAGTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGCTCTTCGCGGGGCGTaGAGACCGGGCACCGCTGCC +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPALRGA*RPGTAA
Trigger: GGCAGCGGTGCCCGGTCTGCACGCCCCGCGAAGAGC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTTGGCGGGCCTCCCTaGCCTGGGCTGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPLGGPP*PGLSPL
Trigger: CAGGGGAGACAGCCCAGGGCAGGGAGGCCCGCCAAG...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCAGGAGAGCAGCACGTaGAGCAGCCCCAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLQESST*SSPRAH
Trigger: GTGGGCCCTGGGGCTGCTGCACGTGCTGCTCTCCTG...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTAGCGGGCAGCCGCGGTaGAGGATATCCGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPSGQPR*RISASG
Trigger: CCCGCTGGCGGATATCCTGCACCGCGGCTGCCCGCT...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCAGACCGGGCACCGCTaGCGCATGTCGTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLQTGHR*RMSSQH
Trigger: GTGCTGGGACGACATGCGGCAGCGGTGCCCGGTCTG...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGCTCTTCGCGGGGCGTaGAGACCGGGCACCGCTGCC +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGALRGA*RPGTAA
Trigger: GGCAGCGGTGCCCGGTCTGCACGCCCCGCGAAGAGC...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCAGGAGAGCAGCACGTaGAGCAGCCCCAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRQESST*SSPRAH
Trigger: GTGGGCCCTGGGGCTGCTGCACGTGCTGCTCTCCTG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp TGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCCAGGAGAGCAGCACGTaGAGCAGCCCCAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: CSGPQWFFEEAGLAWSLPQESST*SSPRAH
Trigger: GTGGGCCCTGGGGCTGCTGCACGTGCTGCTCTCCTG...GGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAAGCGGGCAGCCGCGGTaGAGGATATCCGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGSGQPR*RISASG
Trigger: CCCGCTGGCGGATATCCTGCACCGCGGCTGCCCGCT...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCAGACCGGGCACCGCTaGCGCATGTCGTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTQTGHR*RMSSQH
Trigger: GTGCTGGGACGACATGCGGCAGCGGTGCCCGGTCTG...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCAGGTCCCCCAGCCCATaGCCCCCAAGCCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRRSPSP*PPSPPS
Trigger: GCTTGGTGGGCTTGGGGGCCATGGGCTGGGGGACCT...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295542.6
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGTGGAGTCTGGAGGCTaGGGCTTGGCGGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPVESGG*GLAGLP
Trigger: AGGGAGGCCCGCCAAGCCCCAGCCTCCAGACTCCAC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCTGCGCGGGTGTTGTTaGTCTGCAGCTCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLLRGCC*SAAPRC
Trigger: GCACCGTGGAGCTGCAGATCAACAACACCCGCGCAG...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTAGTCCCGCACCTCGGTaGTCACGCGCTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPSPAPR*SRAPSL
Trigger: CAAGCTGGGAGCGCGTGAGCACCGAGGTGCGGGACT...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGATGGCGCGGAGCCTTCTaGTGTCGCTCCCGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGWRGAF*CRSRLR
Trigger: CCTGAGGCGGGAGCGACAGCAGAAGGCTCCGCGCCA...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCCGTAAGGGGGCTGTaGAGATGCGCCAAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPPVRGL*RCAKLR
Trigger: GCGCAGCTTGGCGCATCTCCACAGCCCCCTTACGGG...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGGTGGAGTCTGGAGGCTaGGGCTTGGCGGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRVESGG*GLAGLP
Trigger: AGGGAGGCCCGCCAAGCCCCAGCCTCCAGACTCCAC...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp TGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCTCGACAGGTGGAGTCTaGAGGCTGGGGCTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: CSGPQWFFEEAGLAWSLPSTGGV*RLGLGG
Trigger: CCCGCCAAGCCCCAGCCTCCAGACTCCACCTGTCGA...GGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGTCCAGGCCCACAGGCTaGGGCAGGCAGGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTSRPTG*GRQGML
Trigger: CAACATGCCCTGCCTGCCCCAGCCTGTGGGCCTGGA...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCAGGTCCCCCAGCCCATaGCCCCCAAGCCTATGGCCA +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRRSPSP*PPSLWP
Trigger: TGGCCATAGGCTTGGGGGCCATGGGCTGGGGGACCT...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423025.6
CDS-3UTR TCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCAGCAGGAGAGCAGTaGCAGGAAACTCGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTPAGEQ*QETRPA
Trigger: AGCCGGGCGAGTTTCCTGTCACTGCTCTCCTGCTGG...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGCGCGGGTGTTGTTaGTCTGCAGCTCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRLRGCC*SAAPRC
Trigger: GCACCGTGGAGCTGCAGATCAACAACACCCGCGCAG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp TGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCCTGCGCGGGTGTTGTTaGTCTGCAGCTCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: CSGPQWFFEEAGLAWSLPLRGCC*SAAPRC
Trigger: GCACCGTGGAGCTGCAGATCAACAACACCCGCGCAG...GGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCTGGGCTGTCTCCCCTaGGTCCATGGTATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLLGCLP*VHGILR
Trigger: CCTGAGGATACCATGGACTCAGGGGAGACAGCCCAG...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCAGTAGAAGGCTGCGATaGCCCTCCGGAGTCGGTAGC +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLSRRLR*PSGVGS
Trigger: GCTACCGACTCCGGAGGGTCATCGCAGCCTTCTACT...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTCTGCAGCTCCACGGTaGAGCCCAGCGATGCGATCA +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLSAAPR*SPAMRS
Trigger: TGATCGCATCGCTGGGCTGCACCGTGGAGCTGCAGA...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGTCCCGCACCTCGGTaGTCACGCGCTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRSPAPR*SRAPSL
Trigger: CAAGCTGGGAGCGCGTGAGCACCGAGGTGCGGGACT...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCTGCGGAAGGAGTACTaGAGGAAGGAGTGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLLRKEY*RKEWWR
Trigger: CCGCCACCACTCCTTCCTGCAGTACTCCTTCCGCAG...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCAACCGGGAAGGACGGTaGGGAAGAGCGAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRNREGR*GRASRT
Trigger: CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTT...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGAACCGGGAAGGACGGTaGGGAAGAGCGAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTNREGR*GRASRT
Trigger: CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTT...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCAGCTACAGGAGACTaGCAGCCCCCAGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPPATGD*QPPGQE
Trigger: CTCCTGACCTGGGGGCTGCCAGTCTCCTGTAGCTGG...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCAGCTACAGGAGACTaGCAGCCCCCAGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTPATGD*QPPGQE
Trigger: CTCCTGACCTGGGGGCTGCCAGTCTCCTGTAGCTGG...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGCCCGTAAGGGGGCTGTaGAGATGCGCCAAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRPVRGL*RCAKLR
Trigger: GCGCAGCTTGGCGCATCTCCACAGCCCCCTTACGGG...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCGTAAGGGGGCTGTaGAGATGCGCCAAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: EVFRAPMVFRRSRASMESPVRGL*RCAKLR
Trigger: GCGCAGCTTGGCGCATCTCCACAGCCCCCTTACGGG...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGATCGACAGGTGGAGTCTaGAGGCTGGGGCTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGSTGGV*RLGLGG
Trigger: CCCGCCAAGCCCCAGCCTCCAGACTCCACCTGTCGA...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCGAAGCCGGGCTAGCATaGAGTCTCCCCCGACCTTCA +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLEAGLA*SLPRPS
Trigger: TGAAGGTCGGGGGAGACTCCATGCTAGCCCGGCTTC...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTCCAGTAGGCCCTaGCATCCAGGCCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRLSSRP*HPGPQA
Trigger: AGCCTGTGGGCCTGGATGCCAGGGCCTACTGGAGAG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACCAGCAGGAGAGCAGTaGCAGGAAACTCGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGPAGEQ*QETRPA
Trigger: AGCCGGGCGAGTTTCCTGTCACTGCTCTCCTGCTGG...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTACTCAGCAGGTCCTTaGACATGGCCCGTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLYSAGP*TWPVRG
Trigger: CCCCCTTACGGGCCATGTTCAAGGACCTGCTGAGTA...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGAGTAGAAGGCTGCGATaGCCCTCCGGAGTCGGTAGC +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTSRRLR*PSGVGS
Trigger: GCTACCGACTCCGGAGGGTCATCGCAGCCTTCTACT...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGTCTGCAGCTCCACGGTaGAGCCCAGCGATGCGATCA +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTSAAPR*SPAMRS
Trigger: TGATCGCATCGCTGGGCTGCACCGTGGAGCTGCAGA...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCGGGTGTTGTTGATCTaGAGCTCCACGGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRRVLLI*SSTVQP
Trigger: GGGCTGCACCGTGGAGCTGCAGATCAACAACACCCG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTGCGGAAGGAGTACTaGAGGAAGGAGTGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPLRKEY*RKEWWR
Trigger: CCGCCACCACTCCTTCCTGCAGTACTCCTTCCGCAG...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGGGGAAGTAGAAGGCTaGGATGACCCTCCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPGEVEG*DDPPES
Trigger: CGACTCCGGAGGGTCATCGCAGCCTTCTACTTCCCC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCAGCTACAGGAGACTaGCAGCCCCCAGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: EVFRAPMVFRRSRASMESPATGD*QPPGQE
Trigger: CTCCTGACCTGGGGGCTGCCAGTCTCCTGTAGCTGG...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCGTACTAGTAGGAGGCTaGCACAGCGGATGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLVLVGG*HSGCEG
Trigger: CCCCTCACATCCGCTGTGCCAGCCTCCTACTAGTAC...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGAAGCCGGGCTAGCATaGAGTCTCCCCCGACCTTCA +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPEAGLA*SLPRPS
Trigger: TGAAGGTCGGGGGAGACTCCATGCTAGCCCGGCTTC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGCTCTCCAGTAGGCCCTaGCATCCAGGCCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRLSSRP*HPGPQA
Trigger: AGCCTGTGGGCCTGGATGCCAGGGCCTACTGGAGAG...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGGGGTTCACCAGGAGCTaGAAGAGACCTATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTGFTRS*KRPMAR
Trigger: CCTGGCCATAGGTCTCTTTCAGCTCCTGGTGAACCC...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295542.6
CDS-3UTR TCA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCTGGGCTGTCTCCCCTaGGTCCATGGTATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EVFRAPMVFRRSRASMESLGCLP*VHGILR
Trigger: CCTGAGGATACCATGGACTCAGGGGAGACAGCCCAG...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGACCAACGACGGCAGCTaGGTATGGCCTGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTTNDGS*VWPGSP
Trigger: TGGTGAACCAGGCCATACTCAGCTGCCGTCGTTGGT...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTACCAACGACGGCAGCTaGGTATGGCCTGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPTNDGS*VWPGSP
Trigger: TGGTGAACCAGGCCATACTCAGCTGCCGTCGTTGGT...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTTTCCATCACTGTCTCTaGGGAGGTGTTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPFHHCL*GGVQGP
Trigger: GGGGCCCTGAACACCTCCTCAGAGACAGTGATGGAA...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCTCTGCAGCTCCACGGTaGAGCCCAGCGATGCGATCA +
Preference number: 4 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLSAAPR*SPAMRS
Trigger: TGATCGCATCGCTGGGCTGCACCGTGGAGCTGCAGA...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGCGGGTGTTGTTGATCTaGAGCTCCACGGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRRVLLI*SSTVQP
Trigger: GGGCTGCACCGTGGAGCTGCAGATCAACAACACCCG...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGGAGATGCGCCAAGCTaGGCGGGTGTTGTTGATCTG +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPGDAPS*AGVVDL
Trigger: CAGATCAACAACACCCGCGCAGCTTGGCGCATCTCC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGCTTGGCGGGCCTCCCTaGCCTGGGCTGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLLGGPP*PGLSPL
Trigger: CAGGGGAGACAGCCCAGGGCAGGGAGGCCCGCCAAG...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCCACTGGGATGCGATTaGGGCACCAAACCTCCATCA +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLPLGCD*GTKPPS
Trigger: TGATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGG...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCAGGCCAATCGGTACTaGAGCTCTCCAGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRQANRY*SSPVGP
Trigger: AGGGCCTACTGGAGAGCTGCAGTACCGATTGGCCTG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGGGGAAGTAGAAGGCTaGGATGACCCTCCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGGEVEG*DDPPES
Trigger: CGACTCCGGAGGGTCATCGCAGCCTTCTACTTCCCC...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCAGGTCAGGAGCCTCTaGACCGCTAAGAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLQVRSL*TAKRGT
Trigger: TGTCCCCCTCTTAGCGGTGCAGAGGCTCCTGACCTG...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTGGCCCCACATAGATaGCAGCCAAGGCGTATCCCA +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPLAPHR*QPRRIP
Trigger: TGGGATACGCCTTGGCTGCCATCTATGTGGGGCCAG...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTCTCCCCTGAGTCCATaGTATCCTCAGGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLSPLSP*YPQACS
Trigger: GCTACACGCCTGAGGATACCATGGACTCAGGGGAGA...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCAGGTGGGTGAGGAGTaGGACCCAGATGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLQVGEE*DPDVLH
Trigger: ATGAAGCACATCTGGGTCCCACTCCTCACCCACCTG...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTCAGCTTTGCGGAGTaGCAGCAGAGTCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPLSFAE*QQSPFA
Trigger: GGCAAACGGACTCTGCTGCCACTCCGCAAAGCTGAG...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCCAGCAGCAGCAGAATaGGCAGTGTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRPAAAE*AVSPGA
Trigger: AGCTCCTGGAGACACTGCCCATTCTGCTGCTGCTGG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCAGCAGCAGCAGAATaGGCAGTGTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTPAAAE*AVSPGA
Trigger: AGCTCCTGGAGACACTGCCCATTCTGCTGCTGCTGG...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp TGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCCCAGCAGCAGCAGAATaGGCAGTGTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: CSGPQWFFEEAGLAWSLPPAAAE*AVSPGA
Trigger: AGCTCCTGGAGACACTGCCCATTCTGCTGCTGCTGG...GGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTACTGCAGGAAGGAGTaGTGGCGGATGGTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLYCRKE*WRMVSK
Trigger: CTTCGACACCATCCGCCACCACTCCTTCCTGCAGTA...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCGAAGCCGGGCTAGCATaGAGTCTCCCCCGACCTTCA +
Preference number: 4 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLEAGLA*SLPRPS
Trigger: TGAAGGTCGGGGGAGACTCCATGCTAGCCCGGCTTC...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGATACTCAGCAGGTCCTTaGACATGGCCCGTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGYSAGP*TWPVRG
Trigger: CCCCCTTACGGGCCATGTTCAAGGACCTGCTGAGTA...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp AGGAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTACCAACGACGGCAGCTaGGTATGGCCTGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: RRCSGPQWFFEEAGLAWSTNDGS*VWPGSP
Trigger: TGGTGAACCAGGCCATACTCAGCTGCCGTCGTTGGT...ACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGATTCCATCACTGTCTCTaGGGAGGTGTTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGFHHCL*GGVQGP
Trigger: GGGGCCCTGAACACCTCCTCAGAGACAGTGATGGAA...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCAGAGCCTGCCTTCCTTaGCCAGCATCTTGGGTACTA +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLRACLP*PASWVL
Trigger: TAGTACCCAAGATGCTGGGCAAGGAAGGCAGGCTCT...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCAGGACAAAGAGCCTaGCTTCCTTGCCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTPGQRA*LPCPAS
Trigger: AGATGCTGGGCAAGGAAGGCAGGCTCTTTGTCCTGG...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGGAGATGCGCCAAGCTaGGCGGGTGTTGTTGATCTG +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGGDAPS*AGVVDL
Trigger: CAGATCAACAACACCCGCGCAGCTTGGCGCATCTCC...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCCACTGGGATGCGATTaGGGCACCAAACCTCCATCA +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRPLGCD*GTKPPS
Trigger: TGATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGTGCCTTCCACTGGGATaGGATTGCGGCACCAAACCT +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTCLPLG*DCGTKP
Trigger: AGGTTTGGTGCCGCAATCGCATCCCAGTGGAAGGCA...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCAGGTCTGCCCAAAGTTaGCTTCCACTGGGATGCGAT +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLRSAQS*LPLGCD
Trigger: ATCGCATCCCAGTGGAAGGCAACTTTGGGCAGACCT...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCCAGCACCCCAGCCTaGTTCTCTTCCTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTPSTPA*FSSLKS
Trigger: TGACTTCAAGGAAGAGAAGCAGGCTGGGGTGCTGGG...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGGGACCAGCAGGAAAGTaGAGGAGAGCAGCACGTGCA +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRGPAGK*RRAARA
Trigger: TGCACGTGCTGCTCTCCTGCACTTTCCTGCTGGTCC...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGGAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTGGACCAGCAGGAAAGTaGAGGAGAGCAGCACGTGCA +
Preference number: 4 (lower is better)
Translates to: RRCSGPQWFFEEAGLAWSGPAGK*RRAARA
Trigger: TGCACGTGCTGCTCTCCTGCACTTTCCTGCTGGTCC...ACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCTGCCCAGCTTCTTCCTaGGGTCATCGATCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRCPASS*GHRSGR
Trigger: TCTGCCAGATCGATGACCGCAGGAAGAAGCTGGGCA...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACAGGCCAATCGGTACTaGAGCTCTCCAGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGQANRY*SSPVGP
Trigger: AGGGCCTACTGGAGAGCTGCAGTACCGATTGGCCTG...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTATGACTGCCTGCGGCTaGGGAAGGAGTACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EVFRAPMVFRRSRASMESMTACG*GRSTAG
Trigger: TCCTGCAGTACTCCTTCCGCAGCCGCAGGCAGTCAT...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCCTGAAGGACCTCCTTaGACACAAGGTTCTATCCCC +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLPEGPP*TQGSIP
Trigger: GGGGATAGAACCTTGTGTCCAAGGAGGTCCTTCAGG...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCGGAGCCTCTGCACCGTaGTATGAGGCTGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLGASAP*YEAVFF
Trigger: GAAGAAAACAGCCTCATACCACGGTGCAGAGGCTCC...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGAGGTCCCCCAGCCCATaGCCCCCAAGCCCACCAAGC +
Preference number: 4 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLRSPSP*PPSPPS
Trigger: GCTTGGTGGGCTTGGGGGCCATGGGCTGGGGGACCT...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGGTACTAGTAGGAGGCTaGCACAGCGGATGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRVLVGG*HSGCEG
Trigger: CCCCTCACATCCGCTGTGCCAGCCTCCTACTAGTAC...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCTTGCCCAGCATCTTaGGTACTAGTAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPPCPAS*VLVGGW
Trigger: CCAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGG...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCCTTGCCCAGCATCTTaGGTACTAGTAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRPCPAS*VLVGGW
Trigger: CCAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACTGGCCCCACATAGATaGCAGCCAAGGCGTATCCCA +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGLAPHR*QPRRIP
Trigger: TGGGATACGCCTTGGCTGCCATCTATGTGGGGCCAG...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCTGGCCCCACATAGATaGCAGCCAAGGCGTATCCCA +
Preference number: 4 (lower is better)
Translates to: EVFRAPMVFRRSRASMESLAPHR*QPRRIP
Trigger: TGGGATACGCCTTGGCTGCCATCTATGTGGGGCCAG...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCTCGCAGATTGGCTACTaGCCCCACATAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRSQIGY*PHIDGS
Trigger: GCTGCCATCTATGTGGGGCCAGTAGCCAATCTGCGA...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp TGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCTCGCAGATTGGCTACTaGCCCCACATAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: CSGPQWFFEEAGLAWSLPSQIGY*PHIDGS
Trigger: GCTGCCATCTATGTGGGGCCAGTAGCCAATCTGCGA...GGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCCAGGTCCTCAAAAGTaGCGGAGATGTTCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLPGPQK*RRCSES
Trigger: AGACTCGGAACATCTCCGCCACTTTTGAGGACCTGG...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCAAAGTTGCCTTCCACTaGGATGCGATTGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLKVAFH*DAIAAP
Trigger: TGGTGCCGCAATCGCATCCCAGTGGAAGGCAACTTT...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACTCAGCTTTGCGGAGTaGCAGCAGAGTCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGLSFAE*QQSPFA
Trigger: GGCAAACGGACTCTGCTGCCACTCCGCAAAGCTGAG...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTTTCTGAGGCCTGGATaGTGGGCTTGCAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLFLRPG*WACKGR
Trigger: TCTTCCCTTGCAAGCCCACCATCCAGGCCTCAGAAA...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCACATTGCTCATTTCTaGGGCCTGGATGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTHIAHF*GLDGGL
Trigger: AAGCCCACCATCCAGGCCTCAGAAATGAGCAATGTG...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTTTCACCTCCAGTTTATaGCTGCCTGCGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: EVFRAPMVFRRSRASMESFTSSL*LPAAAE
Trigger: TTCCGCAGCCGCAGGCAGTCATAAACTGGAGGTGAA...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACCAGGACAAAGAGCCTaGCTTCCTTGCCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGPGQRA*LPCPAS
Trigger: AGATGCTGGGCAAGGAAGGCAGGCTCTTTGTCCTGG...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGGTGCAGCCCAGCGATaGGATCACGTTGTTGAGATT +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPGAAQR*DHVVEI
Trigger: AATCTCAACAACGTGATCGCATCGCTGGGCTGCACC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCTGCACTGTTCATGCTTaGGGTCAAACCAACGACGGC +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRCTVHA*GQTNDG
Trigger: GCCGTCGTTGGTTTGACCGCAAGCATGAACAGTGCA...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCCCCAGATGTGCTTCATaGACTGTTCATGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLPRCAS*TVHACG
Trigger: ACCGCAAGCATGAACAGTGCATGAAGCACATCTGGG...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGTGCCTTCCACTGGGATaGGATTGCGGCACCAAACCT +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRCLPLG*DCGTKP
Trigger: AGGTTTGGTGCCGCAATCGCATCCCAGTGGAAGGCA...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCTGCCTTCCACTGGGATaGGATTGCGGCACCAAACCT +
Preference number: 4 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLCLPLG*DCGTKP
Trigger: AGGTTTGGTGCCGCAATCGCATCCCAGTGGAAGGCA...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACCCAGCACCCCAGCCTaGTTCTCTTCCTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGPSTPA*FSSLKS
Trigger: TGACTTCAAGGAAGAGAAGCAGGCTGGGGTGCTGGG...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGAGTCCCGCACCTCGGTaGTCACGCGCTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLSPAPR*SRAPSL
Trigger: CAAGCTGGGAGCGCGTGAGCACCGAGGTGCGGGACT...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGATGCCCAGCTTCTTCCTaGGGTCATCGATCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGCPASS*GHRSGR
Trigger: TCTGCCAGATCGATGACCGCAGGAAGAAGCTGGGCA...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGGAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTTGCCCAGCTTCTTCCTaGGGTCATCGATCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RRCSGPQWFFEEAGLAWSCPASS*GHRSGR
Trigger: TCTGCCAGATCGATGACCGCAGGAAGAAGCTGGGCA...ACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGTTTTCTCCTCAGCTTTaGGGAGTGGCAGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTFSPQL*GVAAES
Trigger: GGACTCTGCTGCCACTCCGCAAAGCTGAGGAGAAAA...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp TGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCTTAGGATTCAGGGCTTaGAGGTGGATAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CSGPQWFFEEAGLAWSLPLGFRA*RWIEAG
Trigger: CCCAGCCTCTATCCACCTGCAAGCCCTGAATCCTAA...GGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCCTGAAGGACCTCCTTaGACACAAGGTTCTATCCCC +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRPEGPP*TQGSIP
Trigger: GGGGATAGAACCTTGTGTCCAAGGAGGTCCTTCAGG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCGGAGCCTCTGCACCGTaGTATGAGGCTGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRGASAP*YEAVFF
Trigger: GAAGAAAACAGCCTCATACCACGGTGCAGAGGCTCC...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGTCGCAGATTGGCTACTaGCCCCACATAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRSQIGY*PHIDGS
Trigger: GCTGCCATCTATGTGGGGCCAGTAGCCAATCTGCGA...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCGATTGTGTCGCAGATTaGCTACTGGCCCCACATAGA +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLDCVAD*LLAPHR
Trigger: TCTATGTGGGGCCAGTAGCCAATCTGCGACACAATC...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCGTGGAGTCTGGAGGCTaGGGCTTGGCGGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HCRGTGSASSLGMLFDSIVESGG*GLAGLP
Trigger: AGGGAGGCCCGCCAAGCCCCAGCCTCCAGACTCCAC...GATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACAGGTGGGTGAGGAGTaGGACCCAGATGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGQVGEE*DPDVLH
Trigger: ATGAAGCACATCTGGGTCCCACTCCTCACCCACCTG...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTAAAGTTGCCTTCCACTaGGATGCGATTGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPKVAFH*DAIAAP
Trigger: TGGTGCCGCAATCGCATCCCAGTGGAAGGCAACTTT...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGTTTCTGAGGCCTGGATaGTGGGCTTGCAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTFLRPG*WACKGR
Trigger: TCTTCCCTTGCAAGCCCACCATCCAGGCCTCAGAAA...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp TGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCTTTCTGAGGCCTGGATaGTGGGCTTGCAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: CSGPQWFFEEAGLAWSLPFLRPG*WACKGR
Trigger: TCTTCCCTTGCAAGCCCACCATCCAGGCCTCAGAAA...GGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCGGATGGTGTCGAAGATaGAGTAGAGAGCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRGWCRR*SREPSP
Trigger: TGGACTGGGCTCTCTACTCCATCTTCGACACCATCC...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGTGCAGGAAGGAGTGGTaGCGGATGGTGTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRCRKEW*RMVSKM
Trigger: CATCTTCGACACCATCCGCCACCACTCCTTCCTGCA...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGATGCAGGAAGGAGTGGTaGCGGATGGTGTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGCRKEW*RMVSKM
Trigger: CATCTTCGACACCATCCGCCACCACTCCTTCCTGCA...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGATACTGCAGGAAGGAGTaGTGGCGGATGGTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGYCRKE*WRMVSK
Trigger: CTTCGACACCATCCGCCACCACTCCTTCCTGCAGTA...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCTGTTCAGGGCCCCAATaGTTTTTCGAAGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRCSGPQ*FFEEAG
Trigger: CCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp ATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCCGACCTTCACCTCCTGTTCAGGGCCCCAATaGTTTTTCGAAGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: MVFRRSRASMESPPTFTSCSGPQ*FFEEAG
Trigger: CCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA...GGAGGTGAAGGTCGGGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCGCTTCTTCTCTCGCTTaGGGAAGTAGAAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRASSLA*GSRRLR
Trigger: TCGCAGCCTTCTACTTCCCCAAGCGAGAGAAGAAGC...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGCTTCTTCTCTCGCTTaGGGAAGTAGAAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPASSLA*GSRRLR
Trigger: TCGCAGCCTTCTACTTCCCCAAGCGAGAGAAGAAGC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACACATTGCTCATTTCTaGGGCCTGGATGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGHIAHF*GLDGGL
Trigger: AAGCCCACCATCCAGGCCTCAGAAATGAGCAATGTG...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAAGAGCCTGCCTTCCTTaGCCAGCATCTTGGGTACTA +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGRACLP*PASWVL
Trigger: TAGTACCCAAGATGCTGGGCAAGGAAGGCAGGCTCT...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCAGAGCCTGCCTTCCTTaGCCAGCATCTTGGGTACTA +
Preference number: 4 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLRACLP*PASWVL
Trigger: TAGTACCCAAGATGCTGGGCAAGGAAGGCAGGCTCT...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGTGCACTGTTCATGCTTaGGGTCAAACCAACGACGGC +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRCTVHA*GQTNDG
Trigger: GCCGTCGTTGGTTTGACCGCAAGCATGAACAGTGCA...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCCCAGATGTGCTTCATaGACTGTTCATGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRPRCAS*TVHACG
Trigger: ACCGCAAGCATGAACAGTGCATGAAGCACATCTGGG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGAGTGGGACCCAGATGTaGTTCATGCACTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTSGTQM*FMHCSC
Trigger: GCATGAACAGTGCATGAAGCACATCTGGGTCCCACT...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCAGTGGGACCCAGATGTaGTTCATGCACTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRSGTQM*FMHCSC
Trigger: GCATGAACAGTGCATGAAGCACATCTGGGTCCCACT...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp ATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCCGACCTTCACCTCCAGTGGGACCCAGATGTaGTTCATGCACTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: MVFRRSRASMESPPTFTSSGTQM*FMHCSC
Trigger: GCATGAACAGTGCATGAAGCACATCTGGGTCCCACT...GGAGGTGAAGGTCGGGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGGTCTGCCCAAAGTTaGCTTCCACTGGGATGCGAT +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRRSAQS*LPLGCD
Trigger: ATCGCATCCCAGTGGAAGGCAACTTTGGGCAGACCT...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp AGGAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTAGGTCTGCCCAAAGTTaGCTTCCACTGGGATGCGAT +
Preference number: 4 (lower is better)
Translates to: RRCSGPQWFFEEAGLAWSRSAQS*LPLGCD
Trigger: ATCGCATCCCAGTGGAAGGCAACTTTGGGCAGACCT...ACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGTTTTCTCCTCAGCTTTaGGGAGTGGCAGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRFSPQL*GVAAES
Trigger: GGACTCTGCTGCCACTCCGCAAAGCTGAGGAGAAAA...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTTTTTCTCCTCAGCTTTaGGGAGTGGCAGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: EVFRAPMVFRRSRASMESFSPQL*GVAAES
Trigger: GGACTCTGCTGCCACTCCGCAAAGCTGAGGAGAAAA...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTTCCATGAGTCTGTTTTaGGGAAGCACCACTCATCCC +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPSMSLF*GSTTHP
Trigger: GGGATGAGTGGTGCTTCCCCAAAACAGACTCATGGA...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGTCCATGAGTCTGTTTTaGGGAAGCACCACTCATCCC +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTSMSLF*GSTTHP
Trigger: GGGATGAGTGGTGCTTCCCCAAAACAGACTCATGGA...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGGATTGTGTCGCAGATTaGCTACTGGCCCCACATAGA +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTDCVAD*LLAPHR
Trigger: TCTATGTGGGGCCAGTAGCCAATCTGCGACACAATC...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGCCAGGTCCTCAAAAGTaGCGGAGATGTTCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRPGPQK*RRCSES
Trigger: AGACTCGGAACATCTCCGCCACTTTTGAGGACCTGG...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCAGGTCCTCAAAAGTaGCGGAGATGTTCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: EVFRAPMVFRRSRASMESPGPQK*RRCSES
Trigger: AGACTCGGAACATCTCCGCCACTTTTGAGGACCTGG...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCAAAGTTGCCTTCCACTaGGATGCGATTGCGGCACCA +
Preference number: 4 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLKVAFH*DAIAAP
Trigger: TGGTGCCGCAATCGCATCCCAGTGGAAGGCAACTTT...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGGAGTGGTGGCGGATaGTGTCGAAGATGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRRSGGG*CRRWSR
Trigger: TCTACTCCATCTTCGACACCATCCGCCACCACTCCT...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCAGGAGTGGTGGCGGATaGTGTCGAAGATGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLRSGGG*CRRWSR
Trigger: TCTACTCCATCTTCGACACCATCCGCCACCACTCCT...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGATGTTCAGGGCCCCAATaGTTTTTCGAAGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGCSGPQ*FFEEAG
Trigger: CCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp AGGAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCAGGTGGATAGAGGCTaGGGAAACTGGTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: RRCSGPQWFFEEAGLAWSQVDRG*GNWYEA
Trigger: AGCCTCATACCAGTTTCCCCAGCCTCTATCCACCTG...ACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGCTCTGCACCGTGGTATaGGGCTGTTTTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRLCTVV*GCFLLC
Trigger: GCAAAGAAGAAAACAGCCTCATACCACGGTGCAGAG...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp TCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGCCAGCAGGAGAGCAGTaGCAGGAAACTCGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSIGHCRGTGSASSLGMLPAGEQ*QETRPA
Trigger: AGCCGGGCGAGTTTCCTGTCACTGCTCTCCTGCTGG...CAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGATGCGATCACGTTGTTaGGATTGTGTCGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: RTGHFINREGRCGRASRTMRSRC*DCVADW
Trigger: CCAATCTGCGACACAATCTCAACAACGTGATCGCAT...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTATGCGATCACGTTGTTaGGATTGTGTCGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPMRSRC*DCVADW
Trigger: CCAATCTGCGACACAATCTCAACAACGTGATCGCAT...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCGAAGTCAATATTGGCTaGAAATTCCCCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGREVNIG*KFPIQA
Trigger: GGCCTGGATGGGGAATTTTCAGCCAATATTGACTTC...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGGCTTGCAAGGGAAGATaGCGGTTTTCTCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRACKGR*RFSPQL
Trigger: AAGCTGAGGAGAAAACCGTCATCTTCCCTTGCAAGC...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGCTTGCAAGGGAAGATaGCGGTTTTCTCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGACKGR*RFSPQL
Trigger: AAGCTGAGGAGAAAACCGTCATCTTCCCTTGCAAGC...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGCGGGTGTTGTTGATCTaGAGCTCCACGGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLRVLLI*SSTVQP
Trigger: GGGCTGCACCGTGGAGCTGCAGATCAACAACACCCG...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTTCGTAGATGTTCATaGGGTTCACCAGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPLRRCS*GSPGAE
Trigger: TTCAGCTCCTGGTGAACCCCATGAACATCTACGAAG...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295542.6
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCAGGAGCAACGCAGCTTaGTCTTCAGCTCATACATCT +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRRSNAA*SSAHTS
Trigger: AGATGTATGAGCTGAAGACCAAGCTGCGTTGCTCCT...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp ATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCCGACCTTCACCTCCAGGAGCAACGCAGCTTaGTCTTCAGCTCATACATCT +
Preference number: 4 (lower is better)
Translates to: MVFRRSRASMESPPTFTSRSNAA*SSAHTS
Trigger: AGATGTATGAGCTGAAGACCAAGCTGCGTTGCTCCT...GGAGGTGAAGGTCGGGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCAAACCTCCATCACCTTaGCAATGCCACAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: QGILLTGKDGAEERAGRLKPPSP*QCHRRT
Trigger: AGTTCTTCTGTGGCATTGCCAAGGTGATGGAGGTTT...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp AGGAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTATGCGATCACGTTGTTaGGATTGTGTCGCAGATTGG +
Preference number: 4 (lower is better)
Translates to: RRCSGPQWFFEEAGLAWSMRSRC*DCVADW
Trigger: CCAATCTGCGACACAATCTCAACAACGTGATCGCAT...ACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGTACTCAGCAGGTCCTTaGACATGGCCCGTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLYSAGP*TWPVRG
Trigger: CCCCCTTACGGGCCATGTTCAAGGACCTGCTGAGTA...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGAAGTCAATATTGGCTaGAAATTCCCCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SVQGILLTGKDGAEERAGEVNIG*KFPIQA
Trigger: GGCCTGGATGGGGAATTTTCAGCCAATATTGACTTC...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGTTCCATCACTGTCTCTaGGGAGGTGTTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLFHHCL*GGVQGP
Trigger: GGGGCCCTGAACACCTCCTCAGAGACAGTGATGGAA...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCTTCATGCACTGTTCATaGTTGCGGTCAAACCAACGA +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRFMHCS*LRSNQR
Trigger: TCGTTGGTTTGACCGCAAGCATGAACAGTGCATGAA...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp ATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCCGACCTTCACCTCCTTCATGCACTGTTCATaGTTGCGGTCAAACCAACGA +
Preference number: 4 (lower is better)
Translates to: MVFRRSRASMESPPTFTSFMHCS*LRSNQR
Trigger: TCGTTGGTTTGACCGCAAGCATGAACAGTGCATGAA...GGAGGTGAAGGTCGGGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCTTCGTAGATGTTCATaGGGTTCACCAGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLLRRCS*GSPGAE
Trigger: TTCAGCTCCTGGTGAACCCCATGAACATCTACGAAG...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGGAGCAACGCAGCTTaGTCTTCAGCTCATACATCT +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRRSNAA*SSAHTS
Trigger: AGATGTATGAGCTGAAGACCAAGCTGCGTTGCTCCT...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CCA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCAAACCTCCATCACCTTaGCAATGCCACAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: VQGILLTGKDGAEERAGRKPPSP*QCHRRT
Trigger: AGTTCTTCTGTGGCATTGCCAAGGTGATGGAGGTTT...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR TCA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGGCAGAAGTAGGTACTaGTGTAGATGTTGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: TGHFINREGRCGRASRTPGRSRY*CRCCQN
Trigger: GTTTTGACAACATCTACATCAGTACCTACTTCTGCC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp TCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGGGAGATGCGCCAAGCTaGGCGGGTGTTGTTGATCTG +
Preference number: 4 (lower is better)
Translates to: SSIGHCRGTGSASSLGMLGDAPS*AGVVDL
Trigger: CAGATCAACAACACCCGCGCAGCTTGGCGCATCTCC...CAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGTTCATGCACTGTTCATaGTTGCGGTCAAACCAACGA +
Preference number: 4 (lower is better)
Translates to: KRTGHFINREGRCGRASRFMHCS*LRSNQR
Trigger: TCGTTGGTTTGACCGCAAGCATGAACAGTGCATGAA...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR GCA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGCCACTGGGATGCGATTaGGGCACCAAACCTCCATCA +
Preference number: 4 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLPLGCD*GTKPPS
Trigger: TGATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGG...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp TTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGCTGCGGAAGGAGTACTaGAGGAAGGAGTGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: FSSIGHCRGTGSASSLGMLRKEY*RKEWWR
Trigger: CCGCCACCACTCCTTCCTGCAGTACTCCTTCCGCAG...CATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp GTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCACCTCCAGTTTATGACTaGCTGCGGCTGCGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VIVEEQDPLLLSACCLIPPPVYD*LRLRKE
Trigger: CTCCTTCCGCAGCCGCAGGCAGTCATAAACTGGAGG...TGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGCAGGTGGGTGAGGAGTaGGACCCAGATGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLQVGEE*DPDVLH
Trigger: ATGAAGCACATCTGGGTCCCACTCCTCACCCACCTG...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCAAACCTCCATCACCTTaGCAATGCCACAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLKPPSP*QCHRRT
Trigger: AGTTCTTCTGTGGCATTGCCAAGGTGATGGAGGTTT...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp TCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGCTCAGCTTTGCGGAGTaGCAGCAGAGTCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: SSIGHCRGTGSASSLGMLLSFAE*QQSPFA
Trigger: GGCAAACGGACTCTGCTGCCACTCCGCAAAGCTGAG...CAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGCACATTGCTCATTTCTaGGGCCTGGATGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLHIAHF*GLDGGL
Trigger: AAGCCCACCATCCAGGCCTCAGAAATGAGCAATGTG...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp CTCTTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCCCCAGCACCCCAGCCTaGTTCTCTTCCTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LFSSIGHCRGTGSASSLGPSTPA*FSSLKS
Trigger: TGACTTCAAGGAAGAGAAGCAGGCTGGGGTGCTGGG...GCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp TTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGGTACTAGTAGGAGGCTaGCACAGCGGATGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: FSSIGHCRGTGSASSLGMVLVGG*HSGCEG
Trigger: CCCCTCACATCCGCTGTGCCAGCCTCCTACTAGTAC...CATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp CTCTTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCTCTCCCCTGAGTCCATaGTATCCTCAGGCGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LFSSIGHCRGTGSASSLGSPLSP*YPQACS
Trigger: GCTACACGCCTGAGGATACCATGGACTCAGGGGAGA...GCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp GTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATGCAGGAAGGAGTGGTaGCGGATGGTGTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: VIVEEQDPLLLSACCLIPCRKEW*RMVSKM
Trigger: CATCTTCGACACCATCCGCCACCACTCCTTCCTGCA...TGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp CATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCTACTGCAGGAAGGAGTaGTGGCGGATGGTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: HCRGTGSASSLGMLFDSIYCRKE*WRMVSK
Trigger: CTTCGACACCATCCGCCACCACTCCTTCCTGCAGTA...GATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp CATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCGGTGCAGCCCAGCGATaGGATCACGTTGTTGAGATT +
Preference number: 4 (lower is better)
Translates to: HCRGTGSASSLGMLFDSIGAAQR*DHVVEI
Trigger: AATCTCAACAACGTGATCGCATCGCTGGGCTGCACC...GATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp TCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGAACAGCCCACTCTTCTaGCTGGGATGGGGCTCATTA +
Preference number: 4 (lower is better)
Translates to: SSIGHCRGTGSASSLGMLNSPLF*LGWGSL
Trigger: TAATGAGCCCCATCCCAGGCAGAAGAGTGGGCTGTT...CAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp CATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCCCTGAAGGACCTCCTTaGACACAAGGTTCTATCCCC +
Preference number: 4 (lower is better)
Translates to: HCRGTGSASSLGMLFDSIPEGPP*TQGSIP
Trigger: GGGGATAGAACCTTGTGTCCAAGGAGGTCCTTCAGG...GATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp TTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGCCTTGCCCAGCATCTTaGGTACTAGTAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FSSIGHCRGTGSASSLGMPCPAS*VLVGGW
Trigger: CCAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGG...CATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp TTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTGCACTGTTCATGCTTaGGGTCAAACCAACGACGGC +
Preference number: 4 (lower is better)
Translates to: FSSIGHCRGTGSASSLGMCTVHA*GQTNDG
Trigger: GCCGTCGTTGGTTTGACCGCAAGCATGAACAGTGCA...CATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR GCA 90 bp GTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCACCCAGATGTGCTTCATaGACTGTTCATGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: VIVEEQDPLLLSACCLIPPRCAS*TVHACG
Trigger: ACCGCAAGCATGAACAGTGCATGAAGCACATCTGGG...TGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp CTCTTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCGATTGTGTCGCAGATTaGCTACTGGCCCCACATAGA +
Preference number: 4 (lower is better)
Translates to: LFSSIGHCRGTGSASSLGDCVAD*LLAPHR
Trigger: TCTATGTGGGGCCAGTAGCCAATCTGCGACACAATC...GCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CCA 90 bp TTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGGGATGGTGTCGAAGATaGAGTAGAGAGCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: FSSIGHCRGTGSASSLGMGWCRR*SREPSP
Trigger: TGGACTGGGCTCTCTACTCCATCTTCGACACCATCC...CATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp CTCTTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCGAAGTCAATATTGGCTaGAAATTCCCCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LFSSIGHCRGTGSASSLGEVNIG*KFPIQA
Trigger: GGCCTGGATGGGGAATTTTCAGCCAATATTGACTTC...GCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp TTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGGCTTGCAAGGGAAGATaGCGGTTTTCTCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: FSSIGHCRGTGSASSLGMACKGR*RFSPQL
Trigger: AAGCTGAGGAGAAAACCGTCATCTTCCCTTGCAAGC...CATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR TCA 90 bp CATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCGGCAGAAGTAGGTACTaGTGTAGATGTTGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: HCRGTGSASSLGMLFDSIGRSRY*CRCCQN
Trigger: GTTTTGACAACATCTACATCAGTACCTACTTCTGCC...GATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS GCA 90 bp GCGGAGGAAGAGAGCTCTTCGCGGGGCGTGCAGACCGGGCACCGCTaGCGCATGTCGTCCCAGCACGACCAGCAGTACACGGCCTCGCAG +
Preference number: 5 (lower is better)
Translates to: AEEESSSRGVQTGHR*RMSSQHDQQYTASQ
Trigger: CTGCGAGGCCGTGTACTGCTGGTCGTGCTGGGACGACATGCGGCAGCGGTGCCCGGTCTGCACGCCCCGCGAAGAGCTCTCTTCCTCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS CCA 90 bp GCGCCTGCCCCCAGCAGGAGAGCAGTGACAGGAAACTCGCCCGGCTaGCGCCACAGGAACCAGCTACAGGAGACTGGCAGCCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: APAPSRRAVTGNSPG*RHRNQLQETGSPQV
Trigger: GACCTGGGGGCTGCCAGTCTCCTGTAGCTGGTTCCTGTGGCGCCAGCCGGGCGAGTTTCCTGTCACTGCTCTCCTGCTGGGGGCAGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000368420.1
ENST00000423025.6
ENST00000525273.5
CDS TCA 90 bp GGAGGCTGGGGCTTGGCGGGCCTCCCTGCCCTGGGCTGTCTCCCCTaGGTCCATGGTATCCTCAGGCGTGTAGCCCGTCTCACTATTCAC +
Preference number: 5 (lower is better)
Translates to: GGWGLAGLPALGCLP*VHGILRRVARLTIH
Trigger: GTGAATAGTGAGACGGGCTACACGCCTGAGGATACCATGGACTCAGGGGAGACAGCCCAGGGCAGGGAGGCCCGCCAAGCCCCAGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 90 bp GGGCTTGGCGGGCCTCCCTGCCCTGGGCTGTCTCCCCTGAGTCCATaGTATCCTCAGGCGTGTAGCCCGTCTCACTATTCACCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: GLGGPPCPGLSPLSP*YPQACSPSHYSPGH
Trigger: ATGCCCAGGTGAATAGTGAGACGGGCTACACGCCTGAGGATACCATGGACTCAGGGGAGACAGCCCAGGGCAGGGAGGCCCGCCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS TCA 90 bp CCCGTAAGGGGGCTGTGGAGATGCGCCAAGCTGCGCGGGTGTTGTTaGTCTGCAGCTCCACGGTGCAGCCCAGCGATGCGATCACGTTGT +
Preference number: 5 (lower is better)
Translates to: PVRGLWRCAKLRGCC*SAAPRCSPAMRSRC
Trigger: ACAACGTGATCGCATCGCTGGGCTGCACCGTGGAGCTGCAGATCAACAACACCCGCGCAGCTTGGCGCATCTCCACAGCCCCCTTACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS GCA 90 bp AAGGGGGCTGTGGAGATGCGCCAAGCTGCGCGGGTGTTGTTGATCTaGAGCTCCACGGTGCAGCCCAGCGATGCGATCACGTTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: KGAVEMRQAARVLLI*SSTVQPSDAITLLR
Trigger: TCTCAACAACGTGATCGCATCGCTGGGCTGCACCGTGGAGCTGCAGATCAACAACACCCGCGCAGCTTGGCGCATCTCCACAGCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 90 bp GACACACTAACAGGCCAATCGGTACTGCAGCTCTCCAGTAGGCCCTaGCATCCAGGCCCACAGGCTGGGGCAGGCAGGGCATGTTGTTTG +
Preference number: 5 (lower is better)
Translates to: DTLTGQSVLQLSSRP*HPGPQAGAGRACCL
Trigger: CAAACAACATGCCCTGCCTGCCCCAGCCTGTGGGCCTGGATGCCAGGGCCTACTGGAGAGCTGCAGTACCGATTGGCCTGTTAGTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
CDS CCA 90 bp GCCTGCGGCTGCGGAAGGAGTACTGCAGGAAGGAGTGGTGGCGGATaGTGTCGAAGATGGAGTAGAGAGCCCAGTCCAAGCCACACAGCA +
Preference number: 5 (lower is better)
Translates to: ACGCGRSTAGRSGGG*CRRWSREPSPSHTA
Trigger: TGCTGTGTGGCTTGGACTGGGCTCTCTACTCCATCTTCGACACCATCCGCCACCACTCCTTCCTGCAGTACTCCTTCCGCAGCCGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCGGCAGCAGAGTCCGTTaGCCCAGCTTCTTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: QGILLTGKDGAEERAGRLGSRVR*PSFFLR
Trigger: CCGCAGGAAGAAGCTGGGCAAACGGACTCTGCTGCC...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS CCA 90 bp AGGCGTATCCCAGGACAAAGAGCCTGCCTTCCTTGCCCAGCATCTTaGGTACTAGTAGGAGGCTGGCACAGCGGATGTGAGGGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: RRIPGQRACLPCPAS*VLVGGWHSGCEGRS
Trigger: GGACCTCCCCTCACATCCGCTGTGCCAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGGAAGGCAGGCTCTTTGTCCTGGGATACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS-3UTR CAA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGCTGCGCGGGTGTTGTaGATCTGCAGCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: TGHFINREGRCGRASRTPAARVL*ICSSTV
Trigger: CACCGTGGAGCTGCAGATCAACAACACCCGCGCAGC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGGCAGCAGAGTCCGTTaGCCCAGCTTCTTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: TGHFINREGRCGRASRTPGSRVR*PSFFLR
Trigger: CCGCAGGAAGAAGCTGGGCAAACGGACTCTGCTGCC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS TCA 90 bp AGGCCCTCTGGCACCGGAGTCCCACACCTGACCACCACTCTAGGCTaGTCTCCAGTGAGCAGGCCTTACAGATCTCTCCAGTCTTGCCAT +
Preference number: 5 (lower is better)
Translates to: RPSGTGVPHLTTTLG*SPVSRPYRSLQSCH
Trigger: ATGGCAAGACTGGAGAGATCTGTAAGGCCTGCTCACTGGAGATCAGCCTAGAGTGGTGGTCAGGTGTGGGACTCCGGTGCCAGAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368419.2
CDS GCA 90 bp GCCCCACATAGATGGCAGCCAAGGCGTATCCCAGGACAAAGAGCCTaGCTTCCTTGCCCAGCATCTTGGGTACTAGTAGGAGGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: APHRWQPRRIPGQRA*LPCPASWVLVGGWH
Trigger: GTGCCAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGGAAGGCAGGCTCTTTGTCCTGGGATACGCCTTGGCTGCCATCTATGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS GCA 90 bp TGCGCGGGTGTTGTTGATCTGCAGCTCCACGGTGCAGCCCAGCGATaGGATCACGTTGTTGAGATTGTGTCGCAGATTGGCTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: CAGVVDLQLHGAAQR*DHVVEIVSQIGYWP
Trigger: GGGCCAGTAGCCAATCTGCGACACAATCTCAACAACGTGATCGCATCGCTGGGCTGCACCGTGGAGCTGCAGATCAACAACACCCGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS-3UTR CAA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGCTGCGCGGGTGTTGTaGATCTGCAGCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: SVQGILLTGKDGAEERAGAARVL*ICSSTV
Trigger: CACCGTGGAGCTGCAGATCAACAACACCCGCGCAGC...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AGGAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTGCTGCGCGGGTGTTGTaGATCTGCAGCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: RRCSGPQWFFEEAGLAWSAARVL*ICSSTV
Trigger: CACCGTGGAGCTGCAGATCAACAACACCCGCGCAGC...ACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCAAGCTGCGCGGGTGTaGTTGATCTGCAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: VQGILLTGKDGAEERAGRQAARV*LICSST
Trigger: CGTGGAGCTGCAGATCAACAACACCCGCGCAGCTTG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS GCA 90 bp GATGTATGGGTACAGAAGAAACAAGTCCCGACTCCTTCCTGGGCATaGAGGACGGCGCTGTGTTCCACAGGCCGCTTGAGTGTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: DVWVQKKQVPTPSWA*RTALCSTGRLSVPG
Trigger: GCCAGGAACACTCAAGCGGCCTGTGGAACACAGCGCCGTCCTGCATGCCCAGGAAGGAGTCGGGACTTGTTTCTTCTGTACCCATACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS CCA 90 bp TGGAGAGACTCCCTCAGGGCAAGGACGGTGTCTTCCTTCTTAAATTaGCAGCCTCTTCCCTCTGGACCTCCCCGTAAAGCCCAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: WRDSLRARTVSSFLN*QPLPSGPPRKAQEE
Trigger: CTCCTCCTGGGCTTTACGGGGAGGTCCAGAGGGAAGAGGCTGCCAATTTAAGAAGGAAGACACCGTCCTTGCCCTGAGGGAGTCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS-3UTR CAA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTCCTTGCCCAGCATCTaGGGTACTAGTAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QGILLTGKDGAEERAGRLSLPSI*GTSRRL
Trigger: CAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGGA...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGCAAGCTGCGCGGGTGTaGTTGATCTGCAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: KRTGHFINREGRCGRASRQAARV*LICSST
Trigger: CGTGGAGCTGCAGATCAACAACACCCGCGCAGCTTG...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGCGGCCCTCCTGAGTTaGGTGAAGGCTGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: TGHFINREGRCGRASRTPAALLS*VKAALF
Trigger: GAAAAGAGCAGCCTTCACCAAACTCAGGAGGGCCGC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS GCA 90 bp AGGTGGGTGAGGAGTGGGACCCAGATGTGCTTCATGCACTGTTCATaGTTGCGGTCAAACCAACGACGGCAGCTGAGTATGGCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: RWVRSGTQMCFMHCS*LRSNQRRQLSMAWF
Trigger: GAACCAGGCCATACTCAGCTGCCGTCGTTGGTTTGACCGCAAGCATGAACAGTGCATGAAGCACATCTGGGTCCCACTCCTCACCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 90 bp AGACTGGTTGAGGGAGTCGTAGGTCTGCCCAAAGTTGCCTTCCACTaGGATGCGATTGCGGCACCAAACCTCCATCACCTTGGCAATGCC +
Preference number: 5 (lower is better)
Translates to: RLVEGVVGLPKVAFH*DAIAAPNLHHLGNA
Trigger: GGCATTGCCAAGGTGATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGGAAGGCAACTTTGGGCAGACCTACGACTCCCTCAACCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 90 bp TATGACTGCTGCGGAAGGAGTACTGCAGGAAGGAGTGGTGGCGGATaGTGTCGAAGATGGAGTAGAGAGCCCAGTCCAAGCCACACAGCA +
Preference number: 5 (lower is better)
Translates to: YDCCGRSTAGRSGGG*CRRWSREPSPSHTA
Trigger: TGCTGTGTGGCTTGGACTGGGCTCTCTACTCCATCTTCGACACCATCCGCCACCACTCCTTCCTGCAGTACTCCTTCCGCAGCAGTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
CDS CCA 90 bp ACAGGGGATGTATGGGTACAGAAGAAACAAGTCCCGACTCCTTCCTaGGCATGCAGGACGGCGCTGTGTTCCACAGGCCGCTTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: TGDVWVQKKQVPTPS*ACRTALCSTGRLSV
Trigger: AACACTCAAGCGGCCTGTGGAACACAGCGCCGTCCTGCATGCCCAGGAAGGAGTCGGGACTTGTTTCTTCTGTACCCATACATCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS-3UTR CAA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTTCCTTGCCCAGCATCTaGGGTACTAGTAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TGHFINREGRCGRASRTPSLPSI*GTSRRL
Trigger: CAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGGA...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCAAGAGCCTGCCTTCCTaGCCCAGCATCTTGGGTACT +
Preference number: 5 (lower is better)
Translates to: VQGILLTGKDGAEERAGRKSLPS*PSILGT
Trigger: AGTACCCAAGATGCTGGGCAAGGAAGGCAGGCTCTT...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACTACTCAGCAGGTCCTaGAACATGGCCCGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: SVQGILLTGKDGAEERAGLLSRS*NMARKG
Trigger: CCCCTTACGGGCCATGTTCAAGGACCTGCTGAGTAG...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGTCCACTGGGATGCGATaGCGGCACCAAACCTCCATC +
Preference number: 5 (lower is better)
Translates to: KRTGHFINREGRCGRASRSTGMR*RHQTSI
Trigger: GATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGGA...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGATCCACTGGGATGCGATaGCGGCACCAAACCTCCATC +
Preference number: 5 (lower is better)
Translates to: SVQGILLTGKDGAEERAGSTGMR*RHQTSI
Trigger: GATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGGA...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AGGAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTTCCACTGGGATGCGATaGCGGCACCAAACCTCCATC +
Preference number: 5 (lower is better)
Translates to: RRCSGPQWFFEEAGLAWSSTGMR*RHQTSI
Trigger: GATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGGA...ACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGTTTTCTCCTCAGCTTaGCGGAGTGGCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: TGHFINREGRCGRASRTPVFSSA*RSGSRV
Trigger: GACTCTGCTGCCACTCCGCAAAGCTGAGGAGAAAAC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCAGCTCCCTCACCACATaGCTCATTTCTGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VQGILLTGKDGAEERAGRSSLTT*LISEAW
Trigger: CCAGGCCTCAGAAATGAGCAATGTGGTGAGGGAGCT...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCGGCAGGCAGGGCATGTaGTTTGATTCCATCACTGTC +
Preference number: 5 (lower is better)
Translates to: QGILLTGKDGAEERAGRLGRQGM*FDSITV
Trigger: GACAGTGATGGAATCAAACAACATGCCCTGCCTGCC...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGCGGCCCTCCTGAGTTaGGTGAAGGCTGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: SVQGILLTGKDGAEERAGAALLS*VKAALF
Trigger: GAAAAGAGCAGCCTTCACCAAACTCAGGAGGGCCGC...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTGCGGCCCTCCTGAGTTaGGTGAAGGCTGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: EVFRAPMVFRRSRASMESAALLS*VKAALF
Trigger: GAAAAGAGCAGCCTTCACCAAACTCAGGAGGGCCGC...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS GCA 90 bp GGGAGTCGTAGGTCTGCCCAAAGTTGCCTTCCACTGGGATGCGATTaGGGCACCAAACCTCCATCACCTTGGCAATGCCACAGAAGAACT +
Preference number: 5 (lower is better)
Translates to: GSRRSAQSCLPLGCD*GTKPPSPWQCHRRT
Trigger: AGTTCTTCTGTGGCATTGCCAAGGTGATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGGAAGGCAACTTTGGGCAGACCTACGACTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS-3UTR CAA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGGTCCATGAGTCTGTTTaGGGGAAGCACCACTCATCC +
Preference number: 5 (lower is better)
Translates to: RTGHFINREGRCGRASRTVHESV*GKHHSS
Trigger: GGATGAGTGGTGCTTCCCCAAAACAGACTCATGGAC...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGTCCATGAGTCTGTTTaGGGGAAGCACCACTCATCC +
Preference number: 5 (lower is better)
Translates to: TGHFINREGRCGRASRTPVHESV*GKHHSS
Trigger: GGATGAGTGGTGCTTCCCCAAAACAGACTCATGGAC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAAAGAGCCTGCCTTCCTaGCCCAGCATCTTGGGTACT +
Preference number: 5 (lower is better)
Translates to: SVQGILLTGKDGAEERAGKSLPS*PSILGT
Trigger: AGTACCCAAGATGCTGGGCAAGGAAGGCAGGCTCTT...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCAGCGATGCGATCACGTaGTTGAGATTGTGTCGCAGA +
Preference number: 5 (lower is better)
Translates to: QGILLTGKDGAEERAGRLSDAIT*LRLCRR
Trigger: TCTGCGACACAATCTCAACAACGTGATCGCATCGCT...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp TGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCATGCACTGTTCATGCTaGCGGTCAAACCAACGACGG +
Preference number: 5 (lower is better)
Translates to: CSGPQWFFEEAGLAWSLPMHCSC*RSNQRR
Trigger: CCGTCGTTGGTTTGACCGCAAGCATGAACAGTGCAT...GGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAGTTTTCTCCTCAGCTTaGCGGAGTGGCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SVQGILLTGKDGAEERAGVFSSA*RSGSRV
Trigger: GACTCTGCTGCCACTCCGCAAAGCTGAGGAGAAAAC...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAAGCTCCCTCACCACATaGCTCATTTCTGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SVQGILLTGKDGAEERAGSSLTT*LISEAW
Trigger: CCAGGCCTCAGAAATGAGCAATGTGGTGAGGGAGCT...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTAGCTCCCTCACCACATaGCTCATTTCTGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: EVFRAPMVFRRSRASMESSSLTT*LISEAW
Trigger: CCAGGCCTCAGAAATGAGCAATGTGGTGAGGGAGCT...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGGCAGGCAGGGCATGTaGTTTGATTCCATCACTGTC +
Preference number: 5 (lower is better)
Translates to: TGHFINREGRCGRASRTPGRQGM*FDSITV
Trigger: GACAGTGATGGAATCAAACAACATGCCCTGCCTGCC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS CCA 90 bp AGTGTCTCCAGGAGCTCCCTCACCACATTGCTCATTTCTGAGGCCTaGATGGTGGGCTTGCAAGGGAAGATGACGGTTTTCTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SVSRSSLTTLLISEA*MVGLQGKMTVFSSA
Trigger: AGCTGAGGAGAAAACCGTCATCTTCCCTTGCAAGCCCACCATCCAGGCCTCAGAAATGAGCAATGTGGTGAGGGAGCTCCTGGAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS-3UTR CAA 90 bp AGGAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTGTCCATGAGTCTGTTTaGGGGAAGCACCACTCATCC +
Preference number: 5 (lower is better)
Translates to: RRCSGPQWFFEEAGLAWSVHESV*GKHHSS
Trigger: GGATGAGTGGTGCTTCCCCAAAACAGACTCATGGAC...ACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCGATGCGATCACGTTGTaGAGATTGTGTCGCAGATTG +
Preference number: 5 (lower is better)
Translates to: QGILLTGKDGAEERAGRLDAITL*RLCRRL
Trigger: CAATCTGCGACACAATCTCAACAACGTGATCGCATC...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTAGCGATGCGATCACGTaGTTGAGATTGTGTCGCAGA +
Preference number: 5 (lower is better)
Translates to: TGHFINREGRCGRASRTPSDAIT*LRLCRR
Trigger: TCTGCGACACAATCTCAACAACGTGATCGCATCGCT...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp ATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCCGACCTTCACCTCCAGCGATGCGATCACGTaGTTGAGATTGTGTCGCAGA +
Preference number: 5 (lower is better)
Translates to: MVFRRSRASMESPPTFTSSDAIT*LRLCRR
Trigger: TCTGCGACACAATCTCAACAACGTGATCGCATCGCT...GGAGGTGAAGGTCGGGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCGCTCTCAGCAATTCTTaGCTACTCAGCAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VQGILLTGKDGAEERAGRALSNS*LLSRSL
Trigger: CAAGGACCTGCTGAGTAGCAAAGAATTGCTGAGAGC...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGGCTCTCAGCAATTCTTaGCTACTCAGCAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RTGHFINREGRCGRASRTALSNS*LLSRSL
Trigger: CAAGGACCTGCTGAGTAGCAAAGAATTGCTGAGAGC...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAATGCACTGTTCATGCTaGCGGTCAAACCAACGACGG +
Preference number: 5 (lower is better)
Translates to: SVQGILLTGKDGAEERAGMHCSC*RSNQRR
Trigger: CCGTCGTTGGTTTGACCGCAAGCATGAACAGTGCAT...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCAAACCTCCATCACCTaGGCAATGCCACAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: VQGILLTGKDGAEERAGRQTSIT*AMPQKN
Trigger: GTTCTTCTGTGGCATTGCCAAGGTGATGGAGGTTTG...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp ATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCCCCCGACCTTCACCTCCCAAACCTCCATCACCTaGGCAATGCCACAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: MVFRRSRASMESPPTFTSQTSIT*AMPQKN
Trigger: GTTCTTCTGTGGCATTGCCAAGGTGATGGAGGTTTG...GGAGGTGAAGGTCGGGGGAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp ACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTGGCAGGGCATGTTGTTaGATTCCATCACTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: TGHFINREGRCGRASRTPGRACC*IPSLSL
Trigger: CAGAGACAGTGATGGAATCAAACAACATGCCCTGCC...AGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS GCA 90 bp AGGACGGCGCTGTGTTCCACAGGCCGCTTGAGTGTTCCTGGCTTTTaGCCAGCACTAACCCACCAAGCTGTACAAGAACATAATCTTCTG +
Preference number: 5 (lower is better)
Translates to: RTALCSTGRLSVPGF*PALTHQAVQEHNLL
Trigger: CAGAAGATTATGTTCTTGTACAGCTTGGTGGGTTAGTGCTGGGCAAAAGCCAGGAACACTCAAGCGGCCTGTGGAACACAGCGCCGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS CCA 90 bp GCAATGCCACAGAAGAACTTGAACTTCATAGGCAGGCAGAGCAGGTaGGTGAGGAGTGGGACCCAGATGTGCTTCATGCACTGTTCATGC +
Preference number: 5 (lower is better)
Translates to: AMPQKNLNFIGRQSR*VRSGTQMCFMHCSC
Trigger: GCATGAACAGTGCATGAAGCACATCTGGGTCCCACTCCTCACCCACCTGCTCTGCCTGCCTATGAAGTTCAAGTTCTTCTGTGGCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS-3UTR CAA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGAGGCTGTTTTCTTCTTaGCCCTCTTGTGCCATTCTG +
Preference number: 5 (lower is better)
Translates to: RTGHFINREGRCGRASRTRLFSS*PSCAIL
Trigger: CAGAATGGCACAAGAGGGCAAAGAAGAAAACAGCCT...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCATCACGTTGTTGAGATaGTGTCGCAGATTGGCTACT +
Preference number: 5 (lower is better)
Translates to: QGILLTGKDGAEERAGRLITLLR*CRRLAT
Trigger: AGTAGCCAATCTGCGACACAATCTCAACAACGTGAT...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp GTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCGATGCGATCACGTTGTaGAGATTGTGTCGCAGATTG +
Preference number: 5 (lower is better)
Translates to: VQGILLTGKDGAEERAGRDAITL*RLCRRL
Trigger: CAATCTGCGACACAATCTCAACAACGTGATCGCATC...GCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGATGCCACAGAAGAACTaGAACTTCATAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RTGHFINREGRCGRASRTMPQKN*NFIGRQ
Trigger: CTGCCTGCCTATGAAGTTCAAGTTCTTCTGTGGCAT...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGCAAACCTCCATCACCTaGGCAATGCCACAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: KRTGHFINREGRCGRASRQTSIT*AMPQKN
Trigger: GTTCTTCTGTGGCATTGCCAAGGTGATGGAGGTTTG...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp TCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGGGCAGCAGAGTCCGTTaGCCCAGCTTCTTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: SSIGHCRGTGSASSLGMLGSRVR*PSFFLR
Trigger: CCGCAGGAAGAAGCTGGGCAAACGGACTCTGCTGCC...CAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGGGCAGGGCATGTTGTTaGATTCCATCACTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: KRTGHFINREGRCGRASRGRACC*IPSLSL
Trigger: CAGAGACAGTGATGGAATCAAACAACATGCCCTGCC...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS TCA 90 bp GATGAGAGTTATGAAGGGTTATGGGGTTGGACTATATCATGTGGGTaGTGGGGAGTCCCTCGGAATGGAGAGACTCCCTCAGGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: DESYEGLWGWTISCG*WGVPRNGETPSGQG
Trigger: TCCTTGCCCTGAGGGAGTCTCTCCATTCCGAGGGACTCCCCATCACCCACATGATATAGTCCAACCCCATAACCCTTCATAACTCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS-3UTR CAA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAAGGCTGTTTTCTTCTTaGCCCTCTTGTGCCATTCTG +
Preference number: 5 (lower is better)
Translates to: SVQGILLTGKDGAEERAGRLFSS*PSCAIL
Trigger: CAGAATGGCACAAGAGGGCAAAGAAGAAAACAGCCT...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCGATGCGATCACGTTGTaGAGATTGTGTCGCAGATTG +
Preference number: 5 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLDAITL*RLCRRL
Trigger: CAATCTGCGACACAATCTCAACAACGTGATCGCATC...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGATGCCACAGAAGAACTaGAACTTCATAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KRTGHFINREGRCGRASRMPQKN*NFIGRQ
Trigger: CTGCCTGCCTATGAAGTTCAAGTTCTTCTGTGGCAT...CCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp GAGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTATGCCACAGAAGAACTaGAACTTCATAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: EVFRAPMVFRRSRASMESMPQKN*NFIGRQ
Trigger: CTGCCTGCCTATGAAGTTCAAGTTCTTCTGTGGCAT...AGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp CAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGCCTCTCCTTGAAGTCAATATaGGCTGAAAATTCCCCATCC +
Preference number: 5 (lower is better)
Translates to: QGILLTGKDGAEERAGRLSLKSI*AENSPS
Trigger: GGATGGGGAATTTTCAGCCAATATTGACTTCAAGGA...GAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp AGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGAATCACGTTGTTGAGATaGTGTCGCAGATTGGCTACT +
Preference number: 5 (lower is better)
Translates to: SVQGILLTGKDGAEERAGITLLR*CRRLAT
Trigger: AGTAGCCAATCTGCGACACAATCTCAACAACGTGAT...TCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp TTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGCAAGCTGCGCGGGTGTaGTTGATCTGCAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: FSSIGHCRGTGSASSLGMQAARV*LICSST
Trigger: CGTGGAGCTGCAGATCAACAACACCCGCGCAGCTTG...CATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp GTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCACTACTCAGCAGGTCCTaGAACATGGCCCGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: VIVEEQDPLLLSACCLIPLLSRS*NMARKG
Trigger: CCCCTTACGGGCCATGTTCAAGGACCTGCTGAGTAG...TGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp CGTACAGGGCATTTTATTAACCGGGAAGGACGGTGCGGAAGAGCGAGCAGGACGTCCTTGAAGTCAATATaGGCTGAAAATTCCCCATCC +
Preference number: 5 (lower is better)
Translates to: RTGHFINREGRCGRASRTSLKSI*AENSPS
Trigger: GGATGGGGAATTTTCAGCCAATATTGACTTCAAGGA...CGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS-3UTR CAA 90 bp CATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCTCCTTGCCCAGCATCTaGGGTACTAGTAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: HCRGTGSASSLGMLFDSISLPSI*GTSRRL
Trigger: CAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGGA...GATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp AGGTGTTCAGGGCCCCAATGGTTTTTCGAAGAAGCCGGGCTAGCATGGAGTCTCTCCTTGAAGTCAATATaGGCTGAAAATTCCCCATCC +
Preference number: 5 (lower is better)
Translates to: RCSGPQWFFEEAGLAWSLSLKSI*AENSPS
Trigger: GGATGGGGAATTTTCAGCCAATATTGACTTCAAGGA...GAGACTCCATGCTAGCCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp CATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCGTTTTCTCCTCAGCTTaGCGGAGTGGCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: HCRGTGSASSLGMLFDSIVFSSA*RSGSRV
Trigger: GACTCTGCTGCCACTCCGCAAAGCTGAGGAGAAAAC...GATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp TTTTCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGAAGAGCCTGCCTTCCTaGCCCAGCATCTTGGGTACT +
Preference number: 5 (lower is better)
Translates to: FSSIGHCRGTGSASSLGMKSLPS*PSILGT
Trigger: AGTACCCAAGATGCTGGGCAAGGAAGGCAGGCTCTT...CATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGGCTCTCAGCAATTCTTaGCTACTCAGCAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLALSNS*LLSRSL
Trigger: CAAGGACCTGCTGAGTAGCAAAGAATTGCTGAGAGC...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS TCA 90 bp TGCCCAGCTTCTTCCTGCGGTCATCGATCTGGCAGAAGTAGGTACTaGTGTAGATGTTGTCAAAACGAATGTCATGGTTATAGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: CPASSCGHRSGRSRY*CRCCQNECHGYSCP
Trigger: TGGACAGCTATAACCATGACATTCGTTTTGACAACATCTACATCAGTACCTACTTCTGCCAGATCGATGACCGCAGGAAGAAGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS-3UTR CAA 90 bp GTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTTTGATTCCATCACTGATCACGTTGTTGAGATaGTGTCGCAGATTGGCTACT +
Preference number: 5 (lower is better)
Translates to: VEEQDPLLLSACCLIPSLITLLR*CRRLAT
Trigger: AGTAGCCAATCTGCGACACAATCTCAACAACGTGAT...CAGTGATGGAATCAAACAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp TCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGCTCTCGGCATGTTGTTaGATTCCATCACTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SSIGHCRGTGSASSLGMLLSACC*IPSLSL
Trigger: CAGAGACAGTGATGGAATCAAACAACATGCCGAGAG...CAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS-3UTR CAA 90 bp TCTTCAATAGGTCATTGTAGAGGAACAGGATCCGCTTCTTCTCTCGGCATGTTGTCTTCTCTCGGCATGTaGTTTGATTCCATCACTGTC +
Preference number: 5 (lower is better)
Translates to: SSIGHCRGTGSASSLGMLSSLGM*FDSITV
Trigger: GACAGTGATGGAATCAAACAACATGCCGAGAGAAGA...CAACATGCCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS GCA 72 bp CGGCACAGCCAGCGGCGCAGGAGCGGGCAGCCGCGGTaGAGGATATCCGCCAGCGGGTGGCGCGGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: RHSQRRRSGQPR*RISASGWRGAF
Trigger: GAAGGCTCCGCGCCACCCGCTGGCGGATATCCTGCACCGCGGCTGCCCGCTCCTGCGCCGCTGGCTGTGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS GCA 72 bp TGCAGGACCAGCAGGAAAGTGCAGGAGAGCAGCACGTaGAGCAGCCCCAGGGCCCACTCCAGCCGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: CRTSRKVQESST*SSPRAHSSRAS
Trigger: GGAGGCCCGGCTGGAGTGGGCCCTGGGGCTGCTGCACGTGCTGCTCTCCTGCACTTTCCTGCTGGTCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 72 bp ACAGGCCAATCGGTACTGCAGCTCTCCAGTAGGCCCTaGCATCCAGGCCCACAGGCTGGGGCAGGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: TGQSVLQLSSRP*HPGPQAGAGRA
Trigger: TGCCCTGCCTGCCCCAGCCTGTGGGCCTGGATGCCAGGGCCTACTGGAGAGCTGCAGTACCGATTGGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
CDS CAA 72 bp GGGGCTGTGGAGATGCGCCAAGCTGCGCGGGTGTTGTaGATCTGCAGCTCCACGGTGCAGCCCAGCGATGCG +
Preference number: 6 (lower is better)
Translates to: GAVEMRQAARVL*ICSSTVQPSDA
Trigger: CGCATCGCTGGGCTGCACCGTGGAGCTGCAGATCAACAACACCCGCGCAGCTTGGCGCATCTCCACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 90 bp GCCCGTAAGGGGGCTGTGGAGATGCGCCAAGCTGCGCGGGTGTTGTaGATCTGCAGCTCCACGGTGCAGCCCAGCGATGCGATCACGTTG +
Preference number: 6 (lower is better)
Translates to: ARKGAVEMRQAARVL*ICSSTVQPSDAITL
Trigger: CAACGTGATCGCATCGCTGGGCTGCACCGTGGAGCTGCAGATCAACAACACCCGCGCAGCTTGGCGCATCTCCACAGCCCCCTTACGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 90 bp ATGGCCCGTAAGGGGGCTGTGGAGATGCGCCAAGCTGCGCGGGTGTaGTTGATCTGCAGCTCCACGGTGCAGCCCAGCGATGCGATCACG +
Preference number: 6 (lower is better)
Translates to: MARKGAVEMRQAARV*LICSSTVQPSDAIT
Trigger: CGTGATCGCATCGCTGGGCTGCACCGTGGAGCTGCAGATCAACAACACCCGCGCAGCTTGGCGCATCTCCACAGCCCCCTTACGGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS GCA 72 bp GTGGAGATGCGCCAAGCTGCGCGGGTGTTGTTGATCTaGAGCTCCACGGTGCAGCCCAGCGATGCGATCACG +
Preference number: 6 (lower is better)
Translates to: VEMRQAARVLLI*SSTVQPSDAIT
Trigger: CGTGATCGCATCGCTGGGCTGCACCGTGGAGCTGCAGATCAACAACACCCGCGCAGCTTGGCGCATCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 72 bp CTTCCTTGCCCAGCATCTTGGGTACTAGTAGGAGGCTaGCACAGCGGATGTGAGGGGAGGTCCCCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: LPCPASWVLVGG*HSGCEGRSPSP
Trigger: TGGGCTGGGGGACCTCCCCTCACATCCGCTGTGCCAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 72 bp TGGGCATGCAGGACGGCGCTGTGTTCCACAGGCCGCTaGAGTGTTCCTGGCTTTTGCCCAGCACTAACCCAC +
Preference number: 6 (lower is better)
Translates to: WACRTALCSTGR*SVPGFCPALTH
Trigger: GTGGGTTAGTGCTGGGCAAAAGCCAGGAACACTCAAGCGGCCTGTGGAACACAGCGCCGTCCTGCATGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS TCA 72 bp GGCACCGGAGTCCCACACCTGACCACCACTCTAGGCTaGTCTCCAGTGAGCAGGCCTTACAGATCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: GTGVPHLTTTLG*SPVSRPYRSLQ
Trigger: CTGGAGAGATCTGTAAGGCCTGCTCACTGGAGATCAGCCTAGAGTGGTGGTCAGGTGTGGGACTCCGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368419.2
CDS GCA 72 bp AAGCGTACAGGGCATTTTATTAACCGGGAAGGACGGTaGGGAAGAGCGAGCAGGACGCCTCTTCACCCCGCG +
Preference number: 6 (lower is better)
Translates to: KRTGHFINREGR*GRASRTPLHPA
Trigger: CGCGGGGTGAAGAGGCGTCCTGCTCGCTCTTCCGCACCGTCCTTCCCGGTTAATAAAATGCCCTGTACGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295542.6
ENST00000423025.6
CDS CCA 72 bp GTATGGGTACAGAAGAAACAAGTCCCGACTCCTTCCTaGGCATGCAGGACGGCGCTGTGTTCCACAGGCCGC +
Preference number: 6 (lower is better)
Translates to: VWVQKKQVPTPS*ACRTALCSTGR
Trigger: GCGGCCTGTGGAACACAGCGCCGTCCTGCATGCCCAGGAAGGAGTCGGGACTTGTTTCTTCTGTACCCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS CAA 72 bp TGCAGCTCCACGGTGCAGCCCAGCGATGCGATCACGTaGTTGAGATTGTGTCGCAGATTGGCTACTGGCCCC +
Preference number: 6 (lower is better)
Translates to: CSSTVQPSDAIT*LRLCRRLATGP
Trigger: GGGGCCAGTAGCCAATCTGCGACACAATCTCAACAACGTGATCGCATCGCTGGGCTGCACCGTGGAGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 90 bp ACTCCTTCCTGGGCATGCAGGACGGCGCTGTGTTCCACAGGCCGCTaGAGTGTTCCTGGCTTTTGCCCAGCACTAACCCACCAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: TPSWACRTALCSTGR*SVPGFCPALTHQAV
Trigger: TACAGCTTGGTGGGTTAGTGCTGGGCAAAAGCCAGGAACACTCAAGCGGCCTGTGGAACACAGCGCCGTCCTGCATGCCCAGGAAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS CAA 90 bp TGGATGGTGGGCTTGCAAGGGAAGATGACGGTTTTCTCCTCAGCTTaGCGGAGTGGCAGCAGAGTCCGTTTGCCCAGCTTCTTCCTGCGG +
Preference number: 6 (lower is better)
Translates to: WMVGLQGKMTVFSSA*RSGSRVRLPSFFLR
Trigger: CCGCAGGAAGAAGCTGGGCAAACGGACTCTGCTGCCACTCCGCAAAGCTGAGGAGAAAACCGTCATCTTCCCTTGCAAGCCCACCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS TCA 72 bp GCTCCACGGTGCAGCCCAGCGATGCGATCACGTTGTTaGGATTGTGTCGCAGATTGGCTACTGGCCCCACAT +
Preference number: 6 (lower is better)
Translates to: APRCSPAMRSRC*DCVADWLLAPH
Trigger: ATGTGGGGCCAGTAGCCAATCTGCGACACAATCTCAACAACGTGATCGCATCGCTGGGCTGCACCGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS TCA 72 bp AGCATGGAGTCTCCCCCGACCTTCACCTCCAGTTTATaGCTGCCTGCGGCTGCGGAAGGAGTACTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: SMESPPTFTSSL*LPAAAEGVLQE
Trigger: TTCCTGCAGTACTCCTTCCGCAGCCGCAGGCAGTCATAAACTGGAGGTGAAGGTCGGGGGAGACTCCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS GCA 72 bp GTACAGAAGAAACAAGTCCCGACTCCTTCCTGGGCATaGAGGACGGCGCTGTGTTCCACAGGCCGCTTGAGT +
Preference number: 6 (lower is better)
Translates to: VQKKQVPTPSWA*RTALCSTGRLS
Trigger: ACTCAAGCGGCCTGTGGAACACAGCGCCGTCCTGCATGCCCAGGAAGGAGTCGGGACTTGTTTCTTCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS GCA 72 bp CCAGTTTATGACTGCCTGCGGCTGCGGAAGGAGTACTaGAGGAAGGAGTGGTGGCGGATGGTGTCGAAGATG +
Preference number: 6 (lower is better)
Translates to: PVYDCLRLRKEY*RKEWWRMVSKM
Trigger: CATCTTCGACACCATCCGCCACCACTCCTTCCTGCAGTACTCCTTCCGCAGCCGCAGGCAGTCATAAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS CCA 72 bp CCAGGACAAAGAGCCTGCCTTCCTTGCCCAGCATCTTaGGTACTAGTAGGAGGCTGGCACAGCGGATGTGAG +
Preference number: 6 (lower is better)
Translates to: PGQRACLPCPAS*VLVGGWHSGCE
Trigger: CTCACATCCGCTGTGCCAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGGAAGGCAGGCTCTTTGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 72 bp ACTGCAGGAAGGAGTGGTGGCGGATGGTGTCGAAGATaGAGTAGAGAGCCCAGTCCAAGCCACACAGCACCA +
Preference number: 6 (lower is better)
Translates to: TAGRSGGGWCRR*SREPSPSHTAP
Trigger: TGGTGCTGTGTGGCTTGGACTGGGCTCTCTACTCCATCTTCGACACCATCCGCCACCACTCCTTCCTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 72 bp TGCGGAAGGAGTACTGCAGGAAGGAGTGGTGGCGGATaGTGTCGAAGATGGAGTAGAGAGCCCAGTCCAAGC +
Preference number: 6 (lower is better)
Translates to: CGRSTAGRSGGG*CRRWSREPSPS
Trigger: GCTTGGACTGGGCTCTCTACTCCATCTTCGACACCATCCGCCACCACTCCTTCCTGCAGTACTCCTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 72 bp GACGGCGCTGTGTTCCACAGGCCGCTTGAGTGTTCCTaGCTTTTGCCCAGCACTAACCCACCAAGCTGTACA +
Preference number: 6 (lower is better)
Translates to: DGAVFHRPLECS*LLPSTNPPSCT
Trigger: TGTACAGCTTGGTGGGTTAGTGCTGGGCAAAAGCCAGGAACACTCAAGCGGCCTGTGGAACACAGCGCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS CAA 72 bp AGCTCCACGGTGCAGCCCAGCGATGCGATCACGTTGTaGAGATTGTGTCGCAGATTGGCTACTGGCCCCACA +
Preference number: 6 (lower is better)
Translates to: SSTVQPSDAITL*RLCRRLATGPT
Trigger: TGTGGGGCCAGTAGCCAATCTGCGACACAATCTCAACAACGTGATCGCATCGCTGGGCTGCACCGTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 90 bp TGGGTGAGGAGTGGGACCCAGATGTGCTTCATGCACTGTTCATGCTaGCGGTCAAACCAACGACGGCAGCTGAGTATGGCCTGGTTCACC +
Preference number: 6 (lower is better)
Translates to: WVRSGTQMCFMHCSC*RSNQRRQLSMAWFT
Trigger: GGTGAACCAGGCCATACTCAGCTGCCGTCGTTGGTTTGACCGCAAGCATGAACAGTGCATGAAGCACATCTGGGTCCCACTCCTCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS GCA 72 bp AGGTCTGCCCAAAGTTGCCTTCCACTGGGATGCGATTaGGGCACCAAACCTCCATCACCTTGGCAATGCCAC +
Preference number: 6 (lower is better)
Translates to: RSAQSCLPLGCD*GTKPPSPWQCH
Trigger: GTGGCATTGCCAAGGTGATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGGAAGGCAACTTTGGGCAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 72 bp GAGGGAGTCGTAGGTCTGCCCAAAGTTGCCTTCCACTaGGATGCGATTGCGGCACCAAACCTCCATCACCTT +
Preference number: 6 (lower is better)
Translates to: EGVVGLPKVAFH*DAIAAPNLHHL
Trigger: AAGGTGATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGGAAGGCAACTTTGGGCAGACCTACGACTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 72 bp AGGGAAGATGACGGTTTTCTCCTCAGCTTTGCGGAGTaGCAGCAGAGTCCGTTTGCCCAGCTTCTTCCTGCG +
Preference number: 6 (lower is better)
Translates to: REDDGFLLSFAE*QQSPFAQLLPA
Trigger: CGCAGGAAGAAGCTGGGCAAACGGACTCTGCTGCCACTCCGCAAAGCTGAGGAGAAAACCGTCATCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 72 bp TCCCTCAGGGCAAGGACGGTGTCTTCCTTCTTAAATTaGCAGCCTCTTCCCTCTGGACCTCCCCGTAAAGCC +
Preference number: 6 (lower is better)
Translates to: SLRARTVSSFLN*QPLPSGPPRKA
Trigger: GGCTTTACGGGGAGGTCCAGAGGGAAGAGGCTGCCAATTTAAGAAGGAAGACACCGTCCTTGCCCTGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS CAA 72 bp GGCTTGCAAGGGAAGATGACGGTTTTCTCCTCAGCTTaGCGGAGTGGCAGCAGAGTCCGTTTGCCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: GLQGKMTVFSSA*RSGSRVRLPSF
Trigger: GAAGCTGGGCAAACGGACTCTGCTGCCACTCCGCAAAGCTGAGGAGAAAACCGTCATCTTCCCTTGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 90 bp AGCTCCCTCACCACATTGCTCATTTCTGAGGCCTGGATGGTGGGCTaGCAAGGGAAGATGACGGTTTTCTCCTCAGCTTTGCGGAGTGGC +
Preference number: 6 (lower is better)
Translates to: SSLTTLLISEAWMVG*QGKMTVFSSALRSG
Trigger: GCCACTCCGCAAAGCTGAGGAGAAAACCGTCATCTTCCCTTGCAAGCCCACCATCCAGGCCTCAGAAATGAGCAATGTGGTGAGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS TCA 72 bp TGTCTCCAGGAGCTCCCTCACCACATTGCTCATTTCTaGGGCCTGGATGGTGGGCTTGCAAGGGAAGATGAC +
Preference number: 6 (lower is better)
Translates to: CLQELPHHIAHF*GLDGGLAREDD
Trigger: GTCATCTTCCCTTGCAAGCCCACCATCCAGGCCTCAGAAATGAGCAATGTGGTGAGGGAGCTCCTGGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS TCA 72 bp GCTTCTTCTCTCGCTTGGGGAAGTAGAAGGCTGCGATaGCCCTCCGGAGTCGGTAGCCAAAAGCCTGTAACA +
Preference number: 6 (lower is better)
Translates to: ASSLAWGSRRLR*PSGVGSQKPVT
Trigger: TGTTACAGGCTTTTGGCTACCGACTCCGGAGGGTCATCGCAGCCTTCTACTTCCCCAAGCGAGAGAAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
CDS GCA 72 bp AGTCGTAGGTCTGCCCAAAGTTGCCTTCCACTGGGATaGGATTGCGGCACCAAACCTCCATCACCTTGGCAA +
Preference number: 6 (lower is better)
Translates to: SRRSAQSCLPLG*DCGTKPPSPWQ
Trigger: TTGCCAAGGTGATGGAGGTTTGGTGCCGCAATCGCATCCCAGTGGAAGGCAACTTTGGGCAGACCTACGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 72 bp AGTGGGACCCAGATGTGCTTCATGCACTGTTCATGCTaGCGGTCAAACCAACGACGGCAGCTGAGTATGGCC +
Preference number: 6 (lower is better)
Translates to: SGTQMCFMHCSC*RSNQRRQLSMA
Trigger: GGCCATACTCAGCTGCCGTCGTTGGTTTGACCGCAAGCATGAACAGTGCATGAAGCACATCTGGGTCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS TCA 72 bp ACTGTTCATGCTTGCGGTCAAACCAACGACGGCAGCTaGGTATGGCCTGGTTCACCACATAGGAGCAACGCA +
Preference number: 6 (lower is better)
Translates to: TVHACGQTNDGS*VWPGSPHRSNA
Trigger: TGCGTTGCTCCTATGTGGTGAACCAGGCCATACTCAGCTGCCGTCGTTGGTTTGACCGCAAGCATGAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS GCA 72 bp AGGAGTGGGACCCAGATGTGCTTCATGCACTGTTCATaGTTGCGGTCAAACCAACGACGGCAGCTGAGTATG +
Preference number: 6 (lower is better)
Translates to: RSGTQMCFMHCS*LRSNQRRQLSM
Trigger: CATACTCAGCTGCCGTCGTTGGTTTGACCGCAAGCATGAACAGTGCATGAAGCACATCTGGGTCCCACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 72 bp TGTCGCTCCCGCCTCAGGATAGCGGCCCTCCTGAGTTaGGTGAAGGCTGCTCTTTTCTTCAATAGGTCATTG +
Preference number: 6 (lower is better)
Translates to: CRSRLRIAALLS*VKAALFFNRSL
Trigger: CAATGACCTATTGAAGAAAAGAGCAGCCTTCACCAAACTCAGGAGGGCCGCTATCCTGAGGCGGGAGCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
CDS GCA 72 bp CTGTGTTCCACAGGCCGCTTGAGTGTTCCTGGCTTTTaGCCAGCACTAACCCACCAAGCTGTACAAGAACAT +
Preference number: 6 (lower is better)
Translates to: LCSTGRLSVPGF*PALTHQAVQEH
Trigger: ATGTTCTTGTACAGCTTGGTGGGTTAGTGCTGGGCAAAAGCCAGGAACACTCAAGCGGCCTGTGGAACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS TCA 72 bp TATGAAGGGTTATGGGGTTGGACTATATCATGTGGGTaGTGGGGAGTCCCTCGGAATGGAGAGACTCCCTCA +
Preference number: 6 (lower is better)
Translates to: YEGLWGWTISCG*WGVPRNGETPS
Trigger: TGAGGGAGTCTCTCCATTCCGAGGGACTCCCCATCACCCACATGATATAGTCCAACCCCATAACCCTTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368420.1
CDS CCA 72 bp TCTCACTATTCACCTGGGCATCCAGGTCCTCAAAAGTaGCGGAGATGTTCCGAGTCTCTGCTCTCAGCAATT +
Preference number: 6 (lower is better)
Translates to: SHYSPGHPGPQK*RRCSESLLSAI
Trigger: AATTGCTGAGAGCAGAGACTCGGAACATCTCCGCCACTTTTGAGGACCTGGATGCCCAGGTGAATAGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CCA 72 bp GTATGGCCTGGTTCACCACATAGGAGCAACGCAGCTTaGTCTTCAGCTCATACATCTTCTGTGTCGACAGGT +
Preference number: 6 (lower is better)
Translates to: VWPGSPHRSNAA*SSAHTSSVSTG
Trigger: ACCTGTCGACACAGAAGATGTATGAGCTGAAGACCAAGCTGCGTTGCTCCTATGTGGTGAACCAGGCCATAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 72 bp ACCACATTGCTCATTTCTGAGGCCTGGATGGTGGGCTaGCAAGGGAAGATGACGGTTTTCTCCTCAGCTTTG +
Preference number: 6 (lower is better)
Translates to: TTLLISEAWMVG*QGKMTVFSSAL
Trigger: CAAAGCTGAGGAGAAAACCGTCATCTTCCCTTGCAAGCCCACCATCCAGGCCTCAGAAATGAGCAATGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 90 bp CCAGGTCAGGAGCCTCTGCACCGTGGTATGAGGCTGTTTTCTTCTTaGCCCTCTTGTGCCATTCTGATGATGTTTAATGTCCATGAGTCT +
Preference number: 6 (lower is better)
Translates to: PGQEPLHRGMRLFSS*PSCAILMMFNVHES
Trigger: AGACTCATGGACATTAAACATCATCAGAATGGCACAAGAGGGCAAAGAAGAAAACAGCCTCATACCACGGTGCAGAGGCTCCTGACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000368420.1
ENST00000423025.6
CDS CAA 72 bp GAGCCTCTGCACCGTGGTATGAGGCTGTTTTCTTCTTaGCCCTCTTGTGCCATTCTGATGATGTTTAATGTC +
Preference number: 6 (lower is better)
Translates to: EPLHRGMRLFSS*PSCAILMMFNV
Trigger: GACATTAAACATCATCAGAATGGCACAAGAGGGCAAAGAAGAAAACAGCCTCATACCACGGTGCAGAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000368420.1
ENST00000423025.6
CDS CAA 72 bp GAGGCTGGGGAAACTGGTATGAGGCTGTTTTCTTCTTaGCCCTCTTGTGCCATTCTGATGATGTTTAATGTC +
Preference number: 6 (lower is better)
Translates to: EAGETGMRLFSS*PSCAILMMFNV
Trigger: GACATTAAACATCATCAGAATGGCACAAGAGGGCAAAGAAGAAAACAGCCTCATACCAGTTTCCCCAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525273.5
CDS TCA 72 bp TCTTCCTGCGGTCATCGATCTGGCAGAAGTAGGTACTaGTGTAGATGTTGTCAAAACGAATGTCATGGTTAT +
Preference number: 6 (lower is better)
Translates to: SSCGHRSGRSRY*CRCCQNECHGY
Trigger: ATAACCATGACATTCGTTTTGACAACATCTACATCAGTACCTACTTCTGCCAGATCGATGACCGCAGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295542.6
ENST00000368419.2
ENST00000423025.6
ENST00000525273.5
CDS CAA 72 bp ACATACAAACAAAACCAAAGCAAAACGGCTGGATGCTaGTCATCCTTGTTTACTGCTAAATCCTCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: TYKQNQSKTAGC*SSLFTAKSSAD
Trigger: ATCTGCTGAGGATTTAGCAGTAAACAAGGATGACAAGCATCCAGCCGTTTTGCTTTGGTTTTGTTTGTATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368420.1