RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCP1A (Homo sapiens)

Ensembl gene IDs: ENSG00000272886

Ensembl transcript IDs: ENST00000294241.10, ENST00000558034.1, ENST00000559748.5, ENST00000560076.2, ENST00000560624.5, ENST00000610213.6

Found 412 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGATGTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTaGGACTCTGTTTGTCCCGAGCAGCTTGCTGGGATCGCCGTGTCT +
Preference number: 1 (lower is better)
Translates to: PGCRWACGRCSHWPG*DSVCPEQLAGIAVS
Trigger: AGACACGGCGATCCCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACATCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR CCA 90 bp ATCTCCAGGATGTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTaGCTGGGACTCTGTTTGTCCCGAGCAGCTTGCTGGGATCGCCGT +
Preference number: 1 (lower is better)
Translates to: ISRMSMGLWSLQPLA*LGLCLSRAACWDRR
Trigger: ACGGCGATCCCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACATCCTGGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR CCA 90 bp TCATCCTTGGCTCTGCTCAGCATCTCCAGGATGTCGATGGGCCTGTaGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTTTGTCCCGA +
Preference number: 1 (lower is better)
Translates to: SSLALLSISRMSMGL*SLQPLAWLGLCLSR
Trigger: TCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR GCA 90 bp CTGCAGCCATTGGCCTGGCTGGGACTCTGTTTGTCCCGAGCAGCTTaGTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGT +
Preference number: 1 (lower is better)
Translates to: LQPLAWLGLCLSRAA*WDRRVSSSTTSAMS
Trigger: ACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR CCA 90 bp GGGCTGCTCCTCTTGGAGTCTACACTTAGACCCTGGGGGTGGGGGTaGGCACACAAATGGACAGAGTGGTCTAAATGCAGGTCTCCTGGG +
Preference number: 1 (lower is better)
Translates to: GLLLLESTLRPWGWG*AHKWTEWSKCRSPG
Trigger: CCCAGGAGACCTGCATTTAGACCACTCTGTCCATTTGTGTGCCCACCCCCACCCCCAGGGTCTAAGTGTAGACTCCAAGAGGAGCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 90 bp TCTCATACTCATCCTTGGCTCTGCTCAGCATCTCCAGGATGTCGATaGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTT +
Preference number: 1 (lower is better)
Translates to: SHTHPWLCSASPGCR*ACGRCSHWPGWDSV
Trigger: AACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR CCA 90 bp CAGCCATTGGCCTGGCTGGGACTCTGTTTGTCCCGAGCAGCTTGCTaGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGTTTT +
Preference number: 1 (lower is better)
Translates to: QPLAWLGLCLSRAAC*DRRVSSSTTSAMSF
Trigger: AAAACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR GCA 90 bp CGAAGCCCACTGAGACTACACTTGAGGTGCAATCACACCTACTGGTaGGTCCACTTTATGGAAGTCACGTGGCTCCCTGGACACCATCTC +
Preference number: 1 (lower is better)
Translates to: RSPLRLHLRCNHTYW*VHFMEVTWLPGHHL
Trigger: GAGATGGTGTCCAGGGAGCCACGTGACTTCCATAAAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGGGCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 90 bp AGGTGCAATCACACCTACTGGTGCGTCCACTTTATGGAAGTCACGTaGCTCCCTGGACACCATCTCCCGGTGTCAGCAACACTCTGTATC +
Preference number: 1 (lower is better)
Translates to: RCNHTYWCVHFMEVT*LPGHHLPVSATLCI
Trigger: GATACAGAGTGTTGCTGACACCGGGAGATGGTGTCCAGGGAGCCACGTGACTTCCATAAAGTGGACGCACCAGTAGGTGTGATTGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 90 bp CACCGAAGCCCACTGAGACTACACTTGAGGTGCAATCACACCTACTaGTGCGTCCACTTTATGGAAGTCACGTGGCTCCCTGGACACCAT +
Preference number: 1 (lower is better)
Translates to: HRSPLRLHLRCNHTY*CVHFMEVTWLPGHH
Trigger: ATGGTGTCCAGGGAGCCACGTGACTTCCATAAAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGGGCTTCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR GCA 90 bp TATTTGAGTCACCCATCTGATTCCTCTCATACTCATCCTTGGCTCTaGTCAGCATCTCCAGGATGTCGATGGGCCTGTGGTCGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: YLSHPSDSSHTHPWL*SASPGCRWACGRCS
Trigger: GCTGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGAGGAATCAGATGGGTGACTCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR GCA 90 bp GATGTGGGCATTCCCAGCCCCAGCCTTTCCTTCAAAGGTATGACATaGCTGTGTCCACACCACCAGAGCCTGACAGTGCCCTATTCAAAT +
Preference number: 1 (lower is better)
Translates to: DVGIPSPSLSFKGMT*LCPHHQSLTVPYSN
Trigger: ATTTGAATAGGGCACTGTCAGGCTCTGGTGGTGTGGACACAGGCATGTCATACCTTTGAAGGAAAGGCTGGGGCTGGGAATGCCCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 90 bp TCACACCTACTGGTGCGTCCACTTTATGGAAGTCACGTGGCTCCCTaGACACCATCTCCCGGTGTCAGCAACACTCTGTATCCCACTATA +
Preference number: 1 (lower is better)
Translates to: SHLLVRPLYGSHVAP*TPSPGVSNTLYPTI
Trigger: TATAGTGGGATACAGAGTGTTGCTGACACCGGGAGATGGTGTCCAGGGAGCCACGTGACTTCCATAAAGTGGACGCACCAGTAGGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR GCA 90 bp CTTGATTCGTCTGTTCACCGAAGCCCACTGAGACTACACTTGAGGTaGAATCACACCTACTGGTGCGTCCACTTTATGGAAGTCACGTGG +
Preference number: 1 (lower is better)
Translates to: LDSSVHRSPLRLHLR*NHTYWCVHFMEVTW
Trigger: CCACGTGACTTCCATAAAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGGGCTTCGGTGAACAGACGAATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR GCA 90 bp TCACACCTCATGAATCCCAGGAGGTACACAATGAAGAAGAGCTTCTaGCTTAAAGGAACAAGGCTGTCTGGGAGGCCTGAGAGTCCATTA +
Preference number: 1 (lower is better)
Translates to: SHLMNPRRYTMKKSF*LKGTRLSGRPESPL
Trigger: TAATGGACTCTCAGGCCTCCCAGACAGCCTTGTTCCTTTAAGGCAGAAGCTCTTCTTCATTGTGTACCTCCTGGGATTCATGAGGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 90 bp GCTGCAATTATCCAGGCTTGGCCTGGCTTCTCTAGGGATTCATTCTaGCCTGAACTTCCTGGTAATCATGACATGAACTTCTGGCTTCTG +
Preference number: 1 (lower is better)
Translates to: AAIIQAWPGFSRDSF*PELPGNHDMNFWLL
Trigger: CAGAAGCCAGAAGTTCATGTCATGATTACCAGGAAGTTCAGGCCAGAATGAATCCCTAGAGAAGCCAGGCCAAGCCTGGATAATTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 90 bp TTCTCAGTACACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATTaGTCCACTGGTCCTTTTGTCAAAGTGTTAAGGAAAACAATCAAC +
Preference number: 1 (lower is better)
Translates to: FSVHSRKGTRMALSD*STGPFVKVLRKTIN
Trigger: GTTGATTGTTTTCCTTAACACTTTGACAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGTGTACTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 90 bp ATTTGGGAGGTGAAACAGGTTTACCCTTTTCAAGTCTCCATGACTTaGGCACTTAAGTTTACTTTCACACTAAGGAAGCCTTATCATAGA +
Preference number: 1 (lower is better)
Translates to: IWEVKQVYPFQVSMT*ALKFTFTLRKPYHR
Trigger: TCTATGATAAGGCTTCCTTAGTGTGAAAGTAAACTTAAGTGCCCAAGTCATGGAGACTTGAAAAGGGTAAACCTGTTTCACCTCCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR TCA 90 bp CATATCTGTCAGCATTATTCACAGCTAATCCTTATGCTAGCTGGTTaGGCCAATTGGGTTTTTACCCCATCATTAAATAGTGCTCAGAAA +
Preference number: 1 (lower is better)
Translates to: HICQHYSQLILMLAG*ANWVFTPSLNSAQK
Trigger: TTTCTGAGCACTATTTAATGATGGGGTAAAAACCCAATTGGCTCAACCAGCTAGCATAAGGATTAGCTGTGAATAATGCTGACAGATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR GCA 90 bp TGGGCACTTAAGTTTACTTTCACACTAAGGAAGCCTTATCATAGATaGTCTTTACTGTCTATCATATCCATTCCTAGCATTAAAGGTGAA +
Preference number: 1 (lower is better)
Translates to: WALKFTFTLRKPYHR*SLLSIISIPSIKGE
Trigger: TTCACCTTTAATGCTAGGAATGGATATGATAGACAGTAAAGAGCATCTATGATAAGGCTTCCTTAGTGTGAAAGTAAACTTAAGTGCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 90 bp ATGGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTTaGTCCCGAGCAGCTTGCTGGGATCGCCGTGTCTCCTCTTCTACC +
Preference number: 2 (lower is better)
Translates to: MGLWSLQPLAWLGLC*SRAACWDRRVSSST
Trigger: GGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR CAA 90 bp CTCAGCATCTCCAGGATGTCGATGGGCCTGTGGTCGCTGCAGCCATaGGCCTGGCTGGGACTCTGTTTGTCCCGAGCAGCTTGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: LSISRMSMGLWSLQP*AWLGLCLSRAACWD
Trigger: ATCCCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR CAA 90 bp GCTGCAGCCATTGGCCTGGCTGGGACTCTGTTTGTCCCGAGCAGCTaGCTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAG +
Preference number: 2 (lower is better)
Translates to: AAAIGLAGTLFVPSS*LGSPCLLFYHISHE
Trigger: CTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR-3UTR TCA 90 bp ATCCTTGGCTCTGCTCAGCATCTCCAGGATGTCGATGGGCCTGTGGTCGCTGCACTACCACATCAGCCATaGGTTTTGCTATGCGGTGAC +
Preference number: 2 (lower is better)
Translates to: ILGSAQHLQDVDGPVVAALPHQP*VLLCGD
Trigger: GTCACCGCATAGCAAAACTCATGGCTGATGTGGTAG...TGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR-3UTR GCA 90 bp ATCCTTGGCTCTGCTCAGCATCTCCAGGATGTCGATGGGCCTGTGGTCGCTGCAATCAGCCATGAGTTTTaGTATGCGGTGACAGTCATT +
Preference number: 2 (lower is better)
Translates to: ILGSAQHLQDVDGPVVAAISHEF*YAVTVI
Trigger: AATGACTGTCACCGCATAGCAAAACTCATGGCTGAT...TGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR-3UTR CCA 90 bp AAGCCCACTGAGACTACACTTGAGGTGCAATCACACCTACTGGTGCGTCCACTTAGATTTGATAGGATGTaGGCATTCCCAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: KPTETTLEVQSHLLVRPLRFDRM*AFPAPA
Trigger: GGCTGGGGCTGGGAATGCCCACATCCTATCAAATCT...AAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 90 bp GAATCCCTTGATTCGTCTGTTCACCGAAGCCCACTGAGACTACACTaGAGGTGCAATCACACCTACTGGTGCGTCCACTTTATGGAAGTC +
Preference number: 2 (lower is better)
Translates to: ESLDSSVHRSPLRLH*RCNHTYWCVHFMEV
Trigger: GACTTCCATAAAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGGGCTTCGGTGAACAGACGAATCAAGGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR-3UTR TCA 90 bp TATATAAATTTGGGAGGTGAAACAGGTTTACCCTTTTCAAGTCTCCATGACTTGCGGTGGGGGCCGGGCTaGACTTCTGCTGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: YINLGGETGLPFSSLHDLRWGPG*TSAVRL
Trigger: CAGCCTCACAGCAGAAGTTCAGCCCGGCCCCCACCG...CAAGTCATGGAGACTTGAAAAGGGTAAACCTGTTTCACCTCCCAAATTTATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR-3UTR TCA 90 bp AACAAGGATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATAAGCCTATTTGTCTCTaGGGCTGGGGCTCTGCCTTT +
Preference number: 2 (lower is better)
Translates to: NKDLLVMLHSETSIITENKPICL*GWGSAF
Trigger: AAAGGCAGAGCCCCAGCCTCAGAGACAAATAGGCTT...ATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
3UTR-3UTR CCA 90 bp AGGCTGTCTGGGAGGCCTGAGAGTCCATTAAAAGACACCGCATTAACTACAACAGGAAAGGAACCAGAATaGCTTTGTCAGATTGGTCCA +
Preference number: 2 (lower is better)
Translates to: RLSGRPESPLKDTALTTTGKEPE*LCQIGP
Trigger: TGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCC...TGTTGTAGTTAATGCGGTGTCTTTTAATGGACTCTCAGGCCTCCCAGACAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR-3UTR TCA 90 bp GGAAGCCTTATCATAGATGCTCTTTACTGTCTATCATATCCATTCCTAGCATTAAAGCCTATTTGTCTCTaGGGCTGGGGCTCTGCCTTT +
Preference number: 2 (lower is better)
Translates to: GSLIIDALYCLSYPFLALKPICL*GWGSAF
Trigger: AAAGGCAGAGCCCCAGCCTCAGAGACAAATAGGCTT...TAATGCTAGGAATGGATATGATAGACAGTAAAGAGCATCTATGATAAGGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 90 bp GTTCTTAATAAAATACCACTCTCTGTGATGGCTACATCTAAGCCTTaGAAGGTGAGCTGTGGACATACCACATGTGGACAGCATGAAATG +
Preference number: 2 (lower is better)
Translates to: VLNKIPLSVMATSKP*KVSCGHTTCGQHEM
Trigger: CATTTCATGCTGTCCACATGTGGTATGTCCACAGCTCACCTTCAAAGGCTTAGATGTAGCCATCACAGAGAGTGGTATTTTATTAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR-3UTR TCA 90 bp GGAAGCCTTATCATAGATGCTCTTTACTGTCTATCATATCCATTCCTAGCATTATTTCCTTCAAAGGTATaGCATGCCTGTGTCCACACC +
Preference number: 2 (lower is better)
Translates to: GSLIIDALYCLSYPFLALFPSKV*HACVHT
Trigger: GGTGTGGACACAGGCATGTCATACCTTTGAAGGAAA...TAATGCTAGGAATGGATATGATAGACAGTAAAGAGCATCTATGATAAGGCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 90 bp ATTCTCAGTACACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATaGGTCCACTGGTCCTTTTGTCAAAGTGTTAAGGAAAACAATCAA +
Preference number: 2 (lower is better)
Translates to: ILSTLKERNQNGFVR*VHWSFCQSVKENNQ
Trigger: TTGATTGTTTTCCTTAACACTTTGACAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGTGTACTGAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 90 bp TTAAAACTATTCTCAGTACACTCAAGGAAAGGAACCAGAATGGCTTaGTCAGATTGGTCCACTGGTCCTTTTGTCAAAGTGTTAAGGAAA +
Preference number: 2 (lower is better)
Translates to: LKLFSVHSRKGTRMA*SDWSTGPFVKVLRK
Trigger: TTTCCTTAACACTTTGACAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGTGTACTGAGAATAGTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR-3UTR GCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTCAAACTCAATGTTCTaGTCAGAAGTTTCCATGATG +
Preference number: 2 (lower is better)
Translates to: MLHSETSIITENVTWKTFSNSMF*SEVSMM
Trigger: CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGA...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
3UTR-3UTR GCA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTATCAAACTCAATGTTCTaGTCAGAAGTTTCCATGATG +
Preference number: 2 (lower is better)
Translates to: LHSETSIITENVTWKTFLSNSMF*SEVSMM
Trigger: CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGA...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
3UTR GCA 72 bp AGGCTGGGGGAAGCGGTGGGGGCCGGGCTGAACTTCTaGTGTGAGGCTGGTGACTACTCCTCTGTAAGTCCT +
Preference number: 3 (lower is better)
Translates to: RLGEAVGAGLNF*CEAGDYSSVSP
Trigger: AGGACTTACAGAGGAGTAGTCACCAGCCTCACAGCAGAAGTTCAGCCCGGCCCCCACCGCTTCCCCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 72 bp ATGTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTaGCTGGGACTCTGTTTGTCCCGAGCAGCTTGCTGG +
Preference number: 3 (lower is better)
Translates to: MSMGLWSLQPLA*LGLCLSRAACW
Trigger: CCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR CCA 72 bp GCTCTGCTCAGCATCTCCAGGATGTCGATGGGCCTGTaGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGT +
Preference number: 3 (lower is better)
Translates to: ALLSISRMSMGL*SLQPLAWLGLC
Trigger: ACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR GCA 72 bp GGTGCCCCAGACACACCTCTCCTCCAAGCTCTGGGCTaGTCCTCTTGGAGTCTACACTTAGACCCTGGGGGT +
Preference number: 3 (lower is better)
Translates to: GAPDTPLLQALG*SSWSLHLDPGG
Trigger: ACCCCCAGGGTCTAAGTGTAGACTCCAAGAGGAGCAGCCCAGAGCTTGGAGGAGAGGTGTGTCTGGGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 72 bp GCCTGGCTGGGACTCTGTTTGTCCCGAGCAGCTTGCTaGGATCGCCGTGTCTCCTCTTCTACCACATCAGCC +
Preference number: 3 (lower is better)
Translates to: AWLGLCLSRAAC*DRRVSSSTTSA
Trigger: GGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR CCA 72 bp CACACCTACTGGTGCGTCCACTTTATGGAAGTCACGTaGCTCCCTGGACACCATCTCCCGGTGTCAGCAACA +
Preference number: 3 (lower is better)
Translates to: HTYWCVHFMEVT*LPGHHLPVSAT
Trigger: TGTTGCTGACACCGGGAGATGGTGTCCAGGGAGCCACGTGACTTCCATAAAGTGGACGCACCAGTAGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 72 bp CTGGTGCGTCCACTTTATGGAAGTCACGTGGCTCCCTaGACACCATCTCCCGGTGTCAGCAACACTCTGTAT +
Preference number: 3 (lower is better)
Translates to: LVRPLYGSHVAP*TPSPGVSNTLY
Trigger: ATACAGAGTGTTGCTGACACCGGGAGATGGTGTCCAGGGAGCCACGTGACTTCCATAAAGTGGACGCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 72 bp CTCTTGGAGTCTACACTTAGACCCTGGGGGTGGGGGTaGGCACACAAATGGACAGAGTGGTCTAAATGCAGG +
Preference number: 3 (lower is better)
Translates to: LLESTLRPWGWG*AHKWTEWSKCR
Trigger: CCTGCATTTAGACCACTCTGTCCATTTGTGTGCCCACCCCCACCCCCAGGGTCTAAGTGTAGACTCCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR GCA 72 bp CACCCATCTGATTCCTCTCATACTCATCCTTGGCTCTaGTCAGCATCTCCAGGATGTCGATGGGCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: HPSDSSHTHPWL*SASPGCRWACG
Trigger: ACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGAGGAATCAGATGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR GCA 72 bp TGGGGGTGGGCACACAAATGGACAGAGTGGTCTAAATaGAGGTCTCCTGGGGTTCTGCGAAATCTAGCCAGA +
Preference number: 3 (lower is better)
Translates to: WGWAHKWTEWSK*RSPGVLRNLAR
Trigger: TCTGGCTAGATTTCGCAGAACCCCAGGAGACCTGCATTTAGACCACTCTGTCCATTTGTGTGCCCACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR GCA 72 bp CTGAGACTACACTTGAGGTGCAATCACACCTACTGGTaGGTCCACTTTATGGAAGTCACGTGGCTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: LRLHLRCNHTYW*VHFMEVTWLPG
Trigger: TCCAGGGAGCCACGTGACTTCCATAAAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 72 bp CCACTGAGACTACACTTGAGGTGCAATCACACCTACTaGTGCGTCCACTTTATGGAAGTCACGTGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: PLRLHLRCNHTY*CVHFMEVTWLP
Trigger: AGGGAGCCACGTGACTTCCATAAAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR GCA 72 bp TCTGTTCACCGAAGCCCACTGAGACTACACTTGAGGTaGAATCACACCTACTGGTGCGTCCACTTTATGGAA +
Preference number: 3 (lower is better)
Translates to: SVHRSPLRLHLR*NHTYWCVHFME
Trigger: TTCCATAAAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGGGCTTCGGTGAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR TCA 72 bp TGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTaGGGCTGGGGCTCTGCCTTTAGACTTATTCTGCTC +
Preference number: 3 (lower is better)
Translates to: CSEVSMMKPICL*GWGSAFRLILL
Trigger: GAGCAGAATAAGTCTAAAGGCAGAGCCCCAGCCTCAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
3UTR GCA 72 bp CCGTGTCTCCTCTTCTACCACATCAGCCATGAGTTTTaGTATGCGGTGACAGTCATTCTTGTCATAAAACCA +
Preference number: 3 (lower is better)
Translates to: PCLLFYHISHEF*YAVTVILVIKP
Trigger: TGGTTTTATGACAAGAATGACTGTCACCGCATAGCAAAACTCATGGCTGATGTGGTAGAAGAGGAGACACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560076.2
3UTR-3UTR CAA 90 bp TTTACATATTTTCACACTTTGGGCCGGGAAAGTACTCACAGCCTAGGAATACATCCTTATTCCACAGCCTaGCTCCTAGCTGATGAAAAC +
Preference number: 3 (lower is better)
Translates to: FTYFHTLGRESTHSLGIHPYSTA*LLADEN
Trigger: GTTTTCATCAGCTAGGAGCAAGGCTGTGGAATAAGG...ATGTATTCCTAGGCTGTGAGTACTTTCCCGGCCCAAAGTGTGAAAATATGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 72 bp CACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATTaGTCCACTGGTCCTTTTGTCAAAGTGTTAAGGAAA +
Preference number: 3 (lower is better)
Translates to: HSRKGTRMALSD*STGPFVKVLRK
Trigger: TTTCCTTAACACTTTGACAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR-3UTR CAA 90 bp TATATAAATTTGGGAGGTGAAACAGGTTTACCCTTTTCAAGTCTCCATGACTTGGGAACCAGAATGGCTTaGTCAGATTGGTCCACTGGT +
Preference number: 3 (lower is better)
Translates to: YINLGGETGLPFSSLHDLGTRMA*SDWSTG
Trigger: ACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCC...CAAGTCATGGAGACTTGAAAAGGGTAAACCTGTTTCACCTCCCAAATTTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR TCA 72 bp CATACTCAAAAGCATAATTTCGATTCAAGAATCCCTTaGTTCGTCTGTTCACCGAAGCCCACTGAGACTACA +
Preference number: 3 (lower is better)
Translates to: HTQKHNFDSRIP*FVCSPKPTETT
Trigger: TGTAGTCTCAGTGGGCTTCGGTGAACAGACGAATCAAGGGATTCTTGAATCGAAATTATGCTTTTGAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 72 bp GTGAAACAGGTTTACCCTTTTCAAGTCTCCATGACTTaGGCACTTAAGTTTACTTTCACACTAAGGAAGCCT +
Preference number: 3 (lower is better)
Translates to: VKQVYPFQVSMT*ALKFTFTLRKP
Trigger: AGGCTTCCTTAGTGTGAAAGTAAACTTAAGTGCCCAAGTCATGGAGACTTGAAAAGGGTAAACCTGTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 72 bp GAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTaGTCCTTTTGTCAAAGTGTTAAGGAAAACAATCAA +
Preference number: 3 (lower is better)
Translates to: ERNQNGFVRLVH*SFCQSVKENNQ
Trigger: TTGATTGTTTTCCTTAACACTTTGACAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CCA 72 bp CTGTCAGCATTATTCACAGCTAATCCTTATGCTAGCTaGTTGAGCCAATTGGGTTTTTACCCCATCATTAAA +
Preference number: 3 (lower is better)
Translates to: LSALFTANPYAS*LSQLGFYPIIK
Trigger: TTTAATGATGGGGTAAAAACCCAATTGGCTCAACCAGCTAGCATAAGGATTAGCTGTGAATAATGCTGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR TCA 72 bp CAGCATTATTCACAGCTAATCCTTATGCTAGCTGGTTaGGCCAATTGGGTTTTTACCCCATCATTAAATAGT +
Preference number: 3 (lower is better)
Translates to: QHYSQLILMLAG*ANWVFTPSLNS
Trigger: ACTATTTAATGATGGGGTAAAAACCCAATTGGCTCAACCAGCTAGCATAAGGATTAGCTGTGAATAATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR GCA 72 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTaGTCAGAAGTTTCCATGATGAAGCCTATTTGTCTC +
Preference number: 3 (lower is better)
Translates to: IGSISGFSNSMF*SEVSMMKPICL
Trigger: GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
3UTR CAA 72 bp TGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTTaGTCCCGAGCAGCTTGCTGGGATCGCCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: WSLQPLAWLGLC*SRAACWDRRVS
Trigger: GGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp CAGGATGTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGATGTCGATGGGCCTGTaGTCGCTGCAGCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: QDVDGPVVAAAIGLAGTLMSMGL*SLQPLA
Trigger: GGCCAATGGCTGCAGCGACCACAGGCCCATCGACAT...CAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACATCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp CTTGGCTCTGCTCAGCATCTCCAGGATGTCGATGGGCCTGTGGTCGCTGCAGCCTCCCGAGCAGCTTGCTaGGATCGCCGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LGSAQHLQDVDGPVVAAASRAAC*DRRVSS
Trigger: AGAGGAGACACGGCGATCCCAGCAAGCTGCTCGGGA...GGCTGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR GCA 90 bp ATCCTTGGCTCTGCTCAGCATCTCCAGGATGTCGATGGGCCTGTGGTCGCTGCATTGTCCCGAGCAGCTTaGTGGGATCGCCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ILGSAQHLQDVDGPVVAALSRAA*WDRRVS
Trigger: GGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAA...TGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGGCTGAACTTCTGCTGTGAGGCTGGTGACTACTCCTCTGTAAGTGTGTACAGAGCGACCTaGCCCGTGAGGTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: VGAGLNFCCEAGDYSSVSVYRAT*PVRSAM
Trigger: CATCGCAGACCTCACGGGCCAGGTCGCTCTGTACAC...ACTTACAGAGGAGTAGTCACCAGCCTCACAGCAGAAGTTCAGCCCGGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp CCGAGCAGCTTGCTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGGGTCGCTGCAGCCATTaGCCTGGCTGGGACTCTGTT +
Preference number: 4 (lower is better)
Translates to: PSSLLGSPCLLFYHISHEGRCSH*PGWDSV
Trigger: AACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACC...CTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR TCA 90 bp TGTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTTTGTGGTCTGCGATGCTGGTaGTATAGGGGTCGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CRWACGRCSHWPGWDSVCGLRCW*YRGRVA
Trigger: AGCAACACGACCCCTATATCACCAGCATCGCAGACC...ACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR TCA 90 bp CTCCAGGATGTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTACCACATCAGCCATaGGTTTTGCTATGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LQDVDGPVVAAAIGLAGTLPHQP*VLLCGD
Trigger: GTCACCGCATAGCAAAACTCATGGCTGATGTGGTAG...AGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACATCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR GCA 90 bp CCGAGCAGCTTGCTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGCTGGCCCGTGAGGTCTaGGATGCTGGTGATATAGGG +
Preference number: 4 (lower is better)
Translates to: PSSLLGSPCLLFYHISHELAREV*DAGDIG
Trigger: CCCTATATCACCAGCATCGCAGACCTCACGGGCCAG...CTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp TGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTTTGTCCCGAGCAGCTTTCAGTCTTCTCCCACTaGTTGGCCTTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CGRCSHWPGWDSVCPEQLSVFSH*LALGQK
Trigger: CTTCTGCCCCAAGGCCAACCAGTGGGAGAAGACTGA...AAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp CCGAGCAGCTTGCTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGCTGCAGCCATTGGCCTaGCTGGGACTCTGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PSSLLGSPCLLFYHISHELQPLA*LGLCLS
Trigger: GGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAG...CTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGGCTGAACTTCTGCTGTGAGGCTGGTGACTACTCCTCTGTAAGTGAGGAGAAGGGGAGCTaGCTTTCCTCTCAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: VGAGLNFCCEAGDYSSVSEEKGS*LSSQGP
Trigger: CGGACCTTGAGAGGAAAGCCAGCTCCCCTTCTCCTC...ACTTACAGAGGAGTAGTCACCAGCCTCACAGCAGAAGTTCAGCCCGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp AAACTTGACTTGTCAGCCCAAAGCCCGTTTCTATGGGGTAGGCTGGGGGAAGCGGGCCGCCACTCTTGCTaGTGCTGTCTTAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KLDLSAQSPFLWGRLGEAGRHSC*CCLRGR
Trigger: CCTCCCTCTAAGACAGCAGCAGCAAGAGTGGCGGCC...CGCTTCCCCCAGCCTACCCCATAGAAACGGGCTTTGGGCTGACAAGTCAAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 72 bp ATTGGCCTGGCTGGGACTCTGTTTGTCCCGAGCAGCTaGCTGGGATCGCCGTGTCTCCTCTTCTACCACATC +
Preference number: 4 (lower is better)
Translates to: IGLAGTLFVPSS*LGSPCLLFYHI
Trigger: GATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCAGGCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR GCA 90 bp AAACTTGACTTGTCAGCCCAAAGCCCGTTTCTATGGGGTAGGCTGGGGGAAGCGCGCCACTCTTGCTGCTaGTGTCTTAGAGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KLDLSAQSPFLWGRLGEARHSCC*CLRGRL
Trigger: GAGCCTCCCTCTAAGACAGCAGCAGCAAGAGTGGCG...CGCTTCCCCCAGCCTACCCCATAGAAACGGGCTTTGGGCTGACAAGTCAAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp GTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTTTGTCTCTCATACTCATCCTTaGCTCTGCTCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: VDGPVVAAAIGLAGTLFVSHTHP*LCSASP
Trigger: TGGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGA...GACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGGCTGAACTTCTGCTGTGAGGCTGGTGACTACTCCTCTGTAAGTCTGGGCTGCTCCTCTTaGAGTCTACACTTAGACCCT +
Preference number: 4 (lower is better)
Translates to: VGAGLNFCCEAGDYSSVSLGCSS*SLHLDP
Trigger: AGGGTCTAAGTGTAGACTCCAAGAGGAGCAGCCCAG...ACTTACAGAGGAGTAGTCACCAGCCTCACAGCAGAAGTTCAGCCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp CACCTCATGAATCCCAGGAGGTACACAATGAAGAAGAGCTTCTGCCTTAAAGGACGGTGGGGGCCGGGCTaGACTTCTGCTGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HLMNPRRYTMKKSFCLKGRWGPG*TSAVRL
Trigger: CAGCCTCACAGCAGAAGTTCAGCCCGGCCCCCACCG...TCCTTTAAGGCAGAAGCTCTTCTTCATTGTGTACCTCCTGGGATTCATGAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp GTGGGGGCCGGGCTGAACTTCTGCTGTGAGGCTGGTGACTACTCCTCTGTAAGTGTGGTCTTCACTGCCTaGATCATGGTGCTGTTTCGA +
Preference number: 4 (lower is better)
Translates to: VGAGLNFCCEAGDYSSVSVVFTA*IMVLFR
Trigger: TCGAAACAGCACCATGATGCAGGCAGTGAAGACCAC...ACTTACAGAGGAGTAGTCACCAGCCTCACAGCAGAAGTTCAGCCCGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp AAACTTGACTTGTCAGCCCAAAGCCCGTTTCTATGGGGTAGGCTGGGGGAAGCGGGTGCGTCCACTTTATaGAAGTCACGTGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: KLDLSAQSPFLWGRLGEAGASTL*KSRGSL
Trigger: CAGGGAGCCACGTGACTTCCATAAAGTGGACGCACC...CGCTTCCCCCAGCCTACCCCATAGAAACGGGCTTTGGGCTGACAAGTCAAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp TCAGTACACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTGTTGCTCAGGGAGGCTaGGGCCGCCACTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVHSRKGTRMALSDWSTGVAQGG*GRHSCC
Trigger: GCAGCAAGAGTGGCGGCCTCAGCCTCCCTGAGCAAC...ACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGTGTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp GCAGCTTGCTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGTTTTTCTTCTCCCACTGGTTaGCCTTGGGGCAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: AACWDRRVSSSTTSAMSFSSPTG*PWGRRC
Trigger: ACACCTTCTGCCCCAAGGCCAACCAGTGGGAGAAGA...AAAACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp AGGCTGTCTGGGAGGCCTGAGAGTCCATTAAAAGACACCGCATTAACTACAACAGGCTGGACTGAATGGTaGGCAGCAGAAGGGACACCC +
Preference number: 4 (lower is better)
Translates to: RLSGRPESPLKDTALTTTGWTEW*AAEGTP
Trigger: GGGTGTCCCTTCTGCTGCCCACCATTCAGTCCAGCC...TGTTGTAGTTAATGCGGTGTCTTTTAATGGACTCTCAGGCCTCCCAGACAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp AAACTTGACTTGTCAGCCCAAAGCCCGTTTCTATGGGGTAGGCTGGGGGAAGCGCTTGTAACTGTCTGCTaGAAAACACTTGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLDLSAQSPFLWGRLGEALVTVC*KTLGAS
Trigger: GCTGGCCCCAAGTGTTTTCCAGCAGACAGTTACAAG...CGCTTCCCCCAGCCTACCCCATAGAAACGGGCTTTGGGCTGACAAGTCAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp GTGGGGGCCGGGCTGAACTTCTGCTGTGAGGCTGGTGACTACTCCTCTGTAAGTCACAAATGGACAGAGTaGTCTAAATGCAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VGAGLNFCCEAGDYSSVSHKWTE*SKCRSP
Trigger: AGGAGACCTGCATTTAGACCACTCTGTCCATTTGTG...ACTTACAGAGGAGTAGTCACCAGCCTCACAGCAGAAGTTCAGCCCGGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp ACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTCCTTTTGCACTGCAGTGGTCGTTaGAGTAACCAGTGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: TQGKEPEWLCQIGPLVLLHCSGR*SNQWGA
Trigger: GGCGCCCCACTGGTTACTGCAACGACCACTGCAGTG...CAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp AAACTTGACTTGTCAGCCCAAAGCCCGTTTCTATGGGGTAGGCTGGGGGAAGCGGTCAACCTGAGTTTCTaGAGAAGATCAACGCTTGGG +
Preference number: 4 (lower is better)
Translates to: KLDLSAQSPFLWGRLGEAVNLSF*RRSTLG
Trigger: CCCAAGCGTTGATCTTCTCCAGAAACTCAGGTTGAC...CGCTTCCCCCAGCCTACCCCATAGAAACGGGCTTTGGGCTGACAAGTCAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp GCAGCTTGCTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGTTTTAGGGCTGGAGATATTTaGGTCACCCATCTGATTCCT +
Preference number: 4 (lower is better)
Translates to: AACWDRRVSSSTTSAMSFRAGDI*VTHLIP
Trigger: AGGAATCAGATGGGTGACTCAAATATCTCCAGCCCT...AAAACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR TCA 90 bp AGGCTGTCTGGGAGGCCTGAGAGTCCATTAAAAGACACCGCATTAACTACAACACCCAGATTGGAGAGCTaGGTGCTTGGCTGTAACCCA +
Preference number: 4 (lower is better)
Translates to: RLSGRPESPLKDTALTTTPRLES*VLGCNP
Trigger: TGGGTTACAGCCAAGCACTCAGCTCTCCAATCTGGG...TGTTGTAGTTAATGCGGTGTCTTTTAATGGACTCTCAGGCCTCCCAGACAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp GTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTTTGTCGGTTCAACTAGATTGTaGATATTTAGTCGATTCACA +
Preference number: 4 (lower is better)
Translates to: VDGPVVAAAIGLAGTLFVGSTRL*IFSRFT
Trigger: TGTGAATCGACTAAATATGCACAATCTAGTTGAACC...GACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR GCA 90 bp CATGTTGGTCAGGCTGGGACTTGGGTTCTTAATAAAATACCACTCTCTGTGATGTTGTCCCGAGCAGCTTaGTGGGATCGCCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: HVGQAGTWVLNKIPLSVMLSRAA*WDRRVS
Trigger: GGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAA...CATCACAGAGAGTGGTATTTTATTAAGAACCCAAGTCCCAGCCTGACCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTGTGTACAGAGCGACCTaGCCCGTGAGGTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: DLLVMLHSETSIITENVTVYRAT*PVRSAM
Trigger: CATCGCAGACCTCACGGGCCAGGTCGCTCTGTACAC...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTCCTTTTGCAAAGCCCGTTTCTATaGGGTAGGCTGGGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: TQGKEPEWLCQIGPLVLLQSPFL*GRLGEA
Trigger: CGCTTCCCCCAGCCTACCCCATAGAAACGGGCTTTG...CAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp AAACTTGACTTGTCAGCCCAAAGCCCGTTTCTATGGGGTAGGCTGGGGGAAGCGATGGCTTTGTCAGATTaGTCCACTGGTCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: KLDLSAQSPFLWGRLGEAMALSD*STGPFV
Trigger: GACAAAAGGACCAGTGGACCAATCTGACAAAGCCAT...CGCTTCCCCCAGCCTACCCCATAGAAACGGGCTTTGGGCTGACAAGTCAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 72 bp GATTCGTCTGTTCACCGAAGCCCACTGAGACTACACTaGAGGTGCAATCACACCTACTGGTGCGTCCACTTT +
Preference number: 4 (lower is better)
Translates to: DSSVHRSPLRLH*RCNHTYWCVHF
Trigger: AAAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGGGCTTCGGTGAACAGACGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTCAGGTGTGGCTAGCTaGCCAGCTGCCGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: DLLVMLHSETSIITENVTSGVAS*PAAGEK
Trigger: CTTTTCTCCGGCAGCTGGTCAGCTAGCCACACCTGA...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp TTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCGTTGCTCAGGGAGGCTaGGGCCGCCACTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FSNSMFCSEVSMMKPICLVAQGG*GRHSCC
Trigger: GCAGCAAGAGTGGCGGCCTCAGCCTCCCTGAGCAAC...GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTCTGGCCCGTGAGGTCTaGGATGCTGGTGATATAGGG +
Preference number: 4 (lower is better)
Translates to: DLLVMLHSETSIITENVTLAREV*DAGDIG
Trigger: CCCTATATCACCAGCATCGCAGACCTCACGGGCCAG...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp AGGCTGTCTGGGAGGCCTGAGAGTCCATTAAAAGACACCGCATTAACTACAACAGGGGCTCCTCCTAACTaGTCAAAGGGAAATGGTAGG +
Preference number: 4 (lower is better)
Translates to: RLSGRPESPLKDTALTTTGAPPN*SKGNGR
Trigger: CCTACCATTTCCCTTTGAGCAGTTAGGAGGAGCCCC...TGTTGTAGTTAATGCGGTGTCTTTTAATGGACTCTCAGGCCTCCCAGACAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp TGTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTTTGTTCTATACAGAAGAAATaGTTCATGGAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: CRWACGRCSHWPGWDSVCSIQKK*FMELKF
Trigger: GAATTTCAGCTCCATGAACCATTTCTTCTGTATAGA...ACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp AACAAGGATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATCGTTGCAGTAACCAGTaGGGCGCCTGCAACCGGGAT +
Preference number: 4 (lower is better)
Translates to: NKDLLVMLHSETSIITENRCSNQ*GACNRD
Trigger: ATCCCGGTTGCAGGCGCCCCACTGGTTACTGCAACG...ATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
3UTR CAA 72 bp TTGCAGAGCTGCCTTCTACTCTGTTCAAAACTTGACTaGTCAGCCCAAAGCCCGTTTCTATGGGGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQSCLLLCSKLD*SAQSPFLWGRL
Trigger: CAGCCTACCCCATAGAAACGGGCTTTGGGCTGACAAGTCAAGTTTTGAACAGAGTAGAAGGCAGCTCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGCTGGCAGAGTGGGACTaGGAACAGGGCTCAACGGGA +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLLAEWD*EQGSTG
Trigger: TCCCGTTGAGCCCTGTTCTCAGTCCCACTCTGCCAG...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGTGGGGCCAGCAGGACTaGAGACACTGCAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLWGQQD*RHCSGR
Trigger: ACGACCACTGCAGTGTCTTCAGTCCTGCTGGCCCCA...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp AAGCCCACTGAGACTACACTTGAGGTGCAATCACACCTACTGGTGCGTCCACTTATGGAAGGCTTTCTCTaGCTTTCTGGCGTTCCAATA +
Preference number: 4 (lower is better)
Translates to: KPTETTLEVQSHLLVRPLMEGFL*LSGVPI
Trigger: TATTGGAACGCCAGAAAGTCAGAGAAAGCCTTCCAT...AAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp ATCAGCCATGAGTTTTGCTATGCGGTGACAGTCATTCTTGTCATAAAACCAGATTCAGCGCCTCCATCTTaGATCCCAGAGCCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: ISHEFCYAVTVILVIKPDSAPPS*IPEPSP
Trigger: GGGGCTAGGCTCTGGGATTCAAGATGGAGGCGCTGA...ATCTGGTTTTATGACAAGAATGACTGTCACCGCATAGCAAAACTCATGGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR GCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCGCTAGGCTCATCTCCTaGCCAGCTCGACTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: MLHSETSIITENVTWKTFARLIS*PARLSA
Trigger: GGCGCTGAGTCGAGCTGGGCAGGAGATGAGCCTAGC...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp AAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGAGGGGCCGCCACTCTTGCTaGTGCTGTCTTAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KLNVLLRSFHDEAYLSLRGRHSC*CCLRGR
Trigger: CCTCCCTCTAAGACAGCAGCAGCAAGAGTGGCGGCC...CCTCAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGCACTGCAGTGGTCGTTaGAGTAACCAGTGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMHCSGR*SNQWGA
Trigger: GGCGCCCCACTGGTTACTGCAACGACCACTGCAGTG...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATCAGCCATGAGTTTTGCTATGCGGTGACAGTCATTCTTGTCATAAAACCAGATGTGTACAGAGCGACCTaGCCCGTGAGGTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: ISHEFCYAVTVILVIKPDVYRAT*PVRSAM
Trigger: CATCGCAGACCTCACGGGCCAGGTCGCTCTGTACAC...ATCTGGTTTTATGACAAGAATGACTGTCACCGCATAGCAAAACTCATGGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGTCCCGAGCAGCTTGCTaGGATCGCCGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLSRAAC*DRRVSS
Trigger: AGAGGAGACACGGCGATCCCAGCAAGCTGCTCGGGA...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGGGTCGCTGCAGCCATTaGCCTGGCTGGGACTCTGTT +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMGRCSH*PGWDSV
Trigger: AACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACC...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATCAGCCATGAGTTTTGCTATGCGGTGACAGTCATTCTTGTCATAAAACCAGATTCTCCAGGATGTCGATaGGCCTGTGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ISHEFCYAVTVILVIKPDSPGCR*ACGRCS
Trigger: GCTGCAGCGACCACAGGCCCATCGACATCCTGGAGA...ATCTGGTTTTATGACAAGAATGACTGTCACCGCATAGCAAAACTCATGGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp AAGCCCACTGAGACTACACTTGAGGTGCAATCACACCTACTGGTGCGTCCACTTTGCACCTTTCCCAAGTaGTTGTGTCTGTATTTGGTC +
Preference number: 4 (lower is better)
Translates to: KPTETTLEVQSHLLVRPLCTFPK*LCLYLV
Trigger: GACCAAATACAGACACAACCACTTGGGAAAGGTGCA...AAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp ACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTCCTTTTGCTGCCGGAGAAAAGCTaGCTACCATTGCACCTTTCC +
Preference number: 4 (lower is better)
Translates to: TQGKEPEWLCQIGPLVLLLPEKS*LPLHLS
Trigger: GGAAAGGTGCAATGGTAGCCAGCTTTTCTCCGGCAG...CAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp TTTACATATTTTCACACTTTGGGCCGGGAAAGTACTCACAGCCTAGGAATACATCGTTGCAGTAACCAGTaGGGCGCCTGCAACCGGGAT +
Preference number: 4 (lower is better)
Translates to: FTYFHTLGRESTHSLGIHRCSNQ*GACNRD
Trigger: ATCCCGGTTGCAGGCGCCCCACTGGTTACTGCAACG...ATGTATTCCTAGGCTGTGAGTACTTTCCCGGCCCAAAGTGTGAAAATATGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGCTTAGACCCTGGGGGTaGGGGTGGGCACACAAATGG +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLLRPWG*GWAHKW
Trigger: CCATTTGTGTGCCCACCCCCACCCCCAGGGTCTAAG...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCCTGGCAGAGTGGGACTaGGAACAGGGCTCAACGGGA +
Preference number: 4 (lower is better)
Translates to: NFRILKLNVLLRSFHDEALAEWD*EQGSTG
Trigger: TCCCGTTGAGCCCTGTTCTCAGTCCCACTCTGCCAG...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGCGTTCAATGGGGCCCTaGAGGGGCTCTGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMRSMGP*RGSGWQ
Trigger: TTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACG...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp AGGCTGTCTGGGAGGCCTGAGAGTCCATTAAAAGACACCGCATTAACTACAACAACAAGGATCTGCTGGTaGTGCTTCACAGTGAAACCT +
Preference number: 4 (lower is better)
Translates to: RLSGRPESPLKDTALTTTTRICW*CFTVKP
Trigger: AGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGT...TGTTGTAGTTAATGCGGTGTCTTTTAATGGACTCTCAGGCCTCCCAGACAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTGCTAGGCTCATCTCCTaGCCAGCTCGACTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVARLIS*PARLSA
Trigger: GGCGCTGAGTCGAGCTGGGCAGGAGATGAGCCTAGC...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGCGCTTGGGAGGGATGTaGCAGCTGTGTTCGTCACGT +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMRLGGM*QLCSSR
Trigger: ACGTGACGAACACAGCTGGCACATCCCTCCCAAGCG...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp CTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTGAGCAAGCACCATGTTaGTCAGGGAGGCTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LSHRLNFRILKLNVLLRSEQAPC*SGRLRP
Trigger: CGGCCTCAGCCTCCCTGAGCAACATGGTGCTTGCTC...ACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp CATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGAGCAAGCACCATGTTaGTCAGGGAGGCTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: HRLNFRILKLNVLLRSFHEQAPC*SGRLRP
Trigger: CGGCCTCAGCCTCCCTGAGCAACATGGTGCTTGCTC...ATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp AAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGAGGAACGTGCAGCCAGGATaGAGGATGCGCACCCTAGGA +
Preference number: 4 (lower is better)
Translates to: KLNVLLRSFHDEAYLSLRNVQPG*RMRTLG
Trigger: TCCTAGGGTGCGCATCCTGCATCCTGGCTGCACGTT...CCTCAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp AACAAGGATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATACTCTGCAGCAAACGTaGAGCCAGGATGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: NKDLLVMLHSETSIITENTLQQT*SQDAGC
Trigger: GCATCCTGCATCCTGGCTGCACGTTTGCTGCAGAGT...ATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAGCCATTGGCCTGGCTaGGACTCTGTTTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMSHWPG*DSVCPE
Trigger: CTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCT...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCGGTCGCTGCAGCCATTaGCCTGGCTGGGACTCTGTT +
Preference number: 4 (lower is better)
Translates to: MLHSETSIITENVTWKTFGRCSH*PGWDSV
Trigger: AACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACC...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp TTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCATGTCGATGGGCCTGTaGTCGCTGCAGCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: FSNSMFCSEVSMMKPICLMSMGL*SLQPLA
Trigger: GGCCAATGGCTGCAGCGACCACAGGCCCATCGACAT...GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATATGTCGATGGGCCTGTaGTCGCTGCAGCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: HRLNFRILKLNVLLRSFHMSMGL*SLQPLA
Trigger: GGCCAATGGCTGCAGCGACCACAGGCCCATCGACAT...ATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATGAGTCTCTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCTCCAGGATGTCGATaGGCCTGTGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MSLFLIGSISGFSNSMFCSPGCR*ACGRCS
Trigger: GCTGCAGCGACCACAGGCCCATCGACATCCTGGAGA...GCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAGAGACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTCTGGGAGGCATCTCCTaGCAACCTCTCCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: DLLVMLHSETSIITENVTLGGIS*QPLHFF
Trigger: GAAGAAATGGAGAGGTTGCCAGGAGATGCCTCCCAG...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTAGTAGGAGCTTCAGCTaGCAGAGTGGGACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: DLLVMLHSETSIITENVTSRSFS*QSGTEN
Trigger: GTTCTCAGTCCCACTCTGCCAGCTGAAGCTCCTACT...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp AAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGAGGGCCCTGAAGGGGCTCTaGTTGGCAATCAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: KLNVLLRSFHDEAYLSLRALKGL*LAIRLA
Trigger: TGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGC...CCTCAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGGAGGAGAAGGGGAGCTaGCTTTCCTCTCAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMEEKGS*LSSQGP
Trigger: CGGACCTTGAGAGGAAAGCCAGCTCCCCTTCTCCTC...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTCCTTTTGTCAGCTGTAACCCAGGGCTaGAGATATTTGAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: QGKEPEWLCQIGPLVLLSAVTQG*RYLSHP
Trigger: TGGGTGACTCAAATATCTCCAGCCCTGGGTTACAGC...TGACAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTAGTCACGTGGCTCCCTaGACACCATCTCCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPSHVAP*TPSPGV
Trigger: GACACCGGGAGATGGTGTCCAGGGAGCCACGTGACT...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp CACCTCATGAATCCCAGGAGGTACACAATGAAGAAGAGCTTCTGCCTTAAAGGAGGGTGGGCACACAAATaGACAGAGTGGTCTAAATGC +
Preference number: 4 (lower is better)
Translates to: HLMNPRRYTMKKSFCLKGGWAHK*TEWSKC
Trigger: GCATTTAGACCACTCTGTCCATTTGTGTGCCCACCC...TCCTTTAAGGCAGAAGCTCTTCTTCATTGTGTACCTCCTGGGATTCATGAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTCGTTCAATGGGGCCCTaGAGGGGCTCTGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVRSMGP*RGSGWQ
Trigger: TTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACG...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTTCAGGTGTGGCTAGCTaGCCAGCTGCCGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPSGVAS*PAAGEK
Trigger: CTTTTCTCCGGCAGCTGGTCAGCTAGCCACACCTGA...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTATGGGGCCAGCAGGACTaGAGACACTGCAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LHSETSIITENVTWKTFLWGQQD*RHCSGR
Trigger: ACGACCACTGCAGTGTCTTCAGTCCTGCTGGCCCCA...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAATCAGCGCCTCCATCTTaGATCCCAGAGCCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDESAPPS*IPEPSP
Trigger: GGGGCTAGGCTCTGGGATTCAAGATGGAGGCGCTGA...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp TTTTGCTATGCGGTGACAGTCATTCTTGTCATAAAACCAGATACTATATATCGAGCTAGGCTCATCTCCTaGCCAGCTCGACTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: FCYAVTVILVIKPDTIYRARLIS*PARLSA
Trigger: GGCGCTGAGTCGAGCTGGGCAGGAGATGAGCCTAGC...TCGATATATAGTATCTGGTTTTATGACAAGAATGACTGTCACCGCATAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR GCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAATTGTCCCGAGCAGCTTaGTGGGATCGCCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDELSRAA*WDRRVS
Trigger: GGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAA...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp AGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGCGCTTGGGAGGGATGTaGCAGCTGTGTTCGTCACGT +
Preference number: 4 (lower is better)
Translates to: RILKLNVLLRSFHDEAYLRLGGM*QLCSSR
Trigger: ACGTGACGAACACAGCTGGCACATCCCTCCCAAGCG...CAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp TTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCCGCCACTCTTGCTGCTaGTGTCTTAGAGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FSNSMFCSEVSMMKPICLRHSCC*CLRGRL
Trigger: GAGCCTCCCTCTAAGACAGCAGCAGCAAGAGTGGCG...GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp TTTACATATTTTCACACTTTGGGCCGGGAAAGTACTCACAGCCTAGGAATACATGATTGGAGAGCTGAGTaGTTGGCTGTAACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FTYFHTLGRESTHSLGIHDWRAE*LAVTQG
Trigger: GCCCTGGGTTACAGCCAAGCACTCAGCTCTCCAATC...ATGTATTCCTAGGCTGTGAGTACTTTCCCGGCCCAAAGTGTGAAAATATGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGTCTTCTCCCACTGGTTaGCCTTGGGGCAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMSSPTG*PWGRRC
Trigger: ACACCTTCTGCCCCAAGGCCAACCAGTGGGAGAAGA...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GGAAGCCTTATCATAGATGCTCTTTACTGTCTATCATATCCATTCCTAGCATTATCCCGAGCAGCTTGCTaGGATCGCCGTGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSLIIDALYCLSYPFLALSRAAC*DRRVSS
Trigger: AGAGGAGACACGGCGATCCCAGCAAGCTGCTCGGGA...TAATGCTAGGAATGGATATGATAGACAGTAAAGAGCATCTATGATAAGGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp AGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGAGCCATTGGCCTGGCTaGGACTCTGTTTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: RILKLNVLLRSFHDEAYLSHWPG*DSVCPE
Trigger: CTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCT...CAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGCTGCAGCCATTGGCCTaGCTGGGACTCTGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMLQPLA*LGLCLS
Trigger: GGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAG...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTCCTTTTGTCATCTCATACTCATCCTTaGCTCTGCTCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: QGKEPEWLCQIGPLVLLSSHTHP*LCSASP
Trigger: TGGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGA...TGACAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGGCTGGACTGAATGGTaGGCAGCAGAAGGGACACCC +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEGWTEW*AAEGTP
Trigger: GGGTGTCCCTTCTGCTGCCCACCATTCAGTCCAGCC...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGTCAGGCTGGACTGAATaGTGGGCAGCAGAAGGGACA +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMSGWTE*WAAEGT
Trigger: TGTCCCTTCTGCTGCCCACCATTCAGTCCAGCCTGA...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTCACTGCCTGCATCATaGTGCTGTTTCGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: DLLVMLHSETSIITENVTSLPAS*CCFEVS
Trigger: GCTTACCTCGAAACAGCACCATGATGCAGGCAGTGA...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp AGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGGTTCGTCACGTTCAATaGGGCCCTGAAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RILKLNVLLRSFHDEAYLVRHVQ*GPEGAL
Trigger: CAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAAC...CAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTGTTCGTCACGTTCAATaGGGCCCTGAAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPVRHVQ*GPEGAL
Trigger: CAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAAC...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATCTCTCCTCCAAGCTCTaGGCTGCTCCTCTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: HRLNFRILKLNVLLRSFHLSSKL*AAPLGV
Trigger: GACTCCAAGAGGAGCAGCCCAGAGCTTGGAGGAGAG...ATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAAGCACCACCCACCAGTaGTGCCCCAGACACACCTCT +
Preference number: 4 (lower is better)
Translates to: LHSETSIITENVTWKTFLSTTHQ*CPRHTS
Trigger: AGAGGTGTGTCTGGGGCACCACTGGTGGGTGGTGCT...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 72 bp CTACTTTGCAGAGCTGCCTTCTACTCTGTTCAAAACTaGACTTGTCAGCCCAAAGCCCGTTTCTATGGGGTA +
Preference number: 4 (lower is better)
Translates to: LLCRAAFYSVQN*TCQPKARFYGV
Trigger: TACCCCATAGAAACGGGCTTTGGGCTGACAAGTCAAGTTTTGAACAGAGTAGAAGGCAGCTCTGCAAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp CTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTGGTCTGCGATGCTGGTaGTATAGGGGTCGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSHRLNFRILKLNVLLRSGLRCW*YRGRVA
Trigger: AGCAACACGACCCCTATATCACCAGCATCGCAGACC...ACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CATGTTGGTCAGGCTGGGACTTGGGTTCTTAATAAAATACCACTCTCTGTGATGTACACTGAACGCAACTaGAGAAAACTGAAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HVGQAGTWVLNKIPLSVMYTERN*RKLKGG
Trigger: GCCTCCCTTCAGTTTTCTTCAGTTGCGTTCAGTGTA...CATCACAGAGAGTGGTATTTTATTAAGAACCCAAGTCCCAGCCTGACCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGGGGGCTCCTCCTAACTaGTCAAAGGGAAATGGTAGG +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMGAPPN*SKGNGR
Trigger: CCTACCATTTCCCTTTGAGCAGTTAGGAGGAGCCCC...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGCTGCCTGCATCATGGTaGTGTTTCGAGGTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLLPASW*CFEVSW
Trigger: CCAGCTTACCTCGAAACAGCACCATGATGCAGGCAG...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTAAAGCTGGCTACCATTaGACCTTTCCCAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: DLLVMLHSETSIITENVTKAGYH*TFPKWL
Trigger: CAACCACTTGGGAAAGGTGCAATGGTAGCCAGCTTT...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp CAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTCCTTTTGTCAAATCACACCTACTGGTaGGTCCACTTTATGGAAGTC +
Preference number: 4 (lower is better)
Translates to: QGKEPEWLCQIGPLVLLSNHTYW*VHFMEV
Trigger: GACTTCCATAAAGTGGACGCACCAGTAGGTGTGATT...TGACAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp TTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCCTCCAAGCTCTGGGCTaGTCCTCTTGGAGTCTACAC +
Preference number: 4 (lower is better)
Translates to: FSNSMFCSEVSMMKPICLLQALG*SSWSLH
Trigger: GTGTAGACTCCAAGAGGAGCAGCCCAGAGCTTGGAG...GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTTCAGTCTTCTCCCACTaGTTGGCCTTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPSVFSH*LALGQK
Trigger: CTTCTGCCCCAAGGCCAACCAGTGGGAGAAGACTGA...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp AGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCAGTCTTCTCCCACTaGTTGGCCTTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RILKLNVLLRSFHDEAYLSVFSH*LALGQK
Trigger: CTTCTGCCCCAAGGCCAACCAGTGGGAGAAGACTGA...CAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp TTGCTATGCGGTGACAGTCATTCTTGTCATAAAACCAGATACTATATATCGACAAGCCATTGGCCTGGCTaGGACTCTGTTTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: LLCGDSHSCHKTRYYISTSHWPG*DSVCPE
Trigger: CTCGGGACAAACAGAGTCCCAGCCAGGCCAATGGCT...TGTCGATATATAGTATCTGGTTTTATGACAAGAATGACTGTCACCGCATAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTACTGCAGCCATTGGCCTaGCTGGGACTCTGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LHSETSIITENVTWKTFLLQPLA*LGLCLS
Trigger: GGACAAACAGAGTCCCAGCCAGGCCAATGGCTGCAG...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAAGAAATGAGTCTCCAGGATGTCGATaGGCCTGTGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ETSIITENVTWKTFLRNESPGCR*ACGRCS
Trigger: GCTGCAGCGACCACAGGCCCATCGACATCCTGGAGA...CTCATTTCTTAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTGGCTGGTTCAGGAGTaGAGACCTCTGTCTAGGCGT +
Preference number: 4 (lower is better)
Translates to: NFRILKLNVLLRSFHDEAWLVQE*RPLSRR
Trigger: ACGCCTAGACAGAGGTCTCCACTCCTGAACCAGCCA...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATGAGTCTCTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTGGCTGGTTCAGGAGTaGAGACCTCTGTCTAGGCGT +
Preference number: 4 (lower is better)
Translates to: MSLFLIGSISGFSNSMFCWLVQE*RPLSRR
Trigger: ACGCCTAGACAGAGGTCTCCACTCCTGAACCAGCCA...GCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAGAGACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGCAATCAGACTGGCATaGCTTAGCTCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: HRLNFRILKLNVLLRSFHAIRLA*LSSGTG
Trigger: GCCAGTCCCTGAGCTAAGCCATGCCAGTCTGATTGC...ATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGGGTTGGCAATCAGACTaGCATGGCTTAGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLGWQSD*HGLAQG
Trigger: TCCCTGAGCTAAGCCATGCCAGTCTGATTGCCAACC...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp TTTACATATTTTCACACTTTGGGCCGGGAAAGTACTCACAGCCTAGGAATACATGGTTGGCAATCAGACTaGCATGGCTTAGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: FTYFHTLGRESTHSLGIHGWQSD*HGLAQG
Trigger: TCCCTGAGCTAAGCCATGCCAGTCTGATTGCCAACC...ATGTATTCCTAGGCTGTGAGTACTTTCCCGGCCCAAAGTGTGAAAATATGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp AACAAGGATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATTTTATGGAAGTCACGTaGCTCCCTGGACACCATCTC +
Preference number: 4 (lower is better)
Translates to: NKDLLVMLHSETSIITENFMEVT*LPGHHL
Trigger: GAGATGGTGTCCAGGGAGCCACGTGACTTCCATAAA...ATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp CATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGGGGTTTCACCATGTTaGTCAGGCTGGGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: HRLNFRILKLNVLLRSFHGVSPC*SGWDLG
Trigger: ACCCAAGTCCCAGCCTGACCAACATGGTGAAACCCC...ATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp AAGCCCACTGAGACTACACTTGAGGTGCAATCACACCTACTGGTGCGTCCACTTTCAAACTACATTCTTTaGGGGAGGAGAGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: KPTETTLEVQSHLLVRPLSNYIL*GRRVIK
Trigger: CTTTATTACTCTCCTCCCCCAAAGAATGTAGTTTGA...AAGTGGACGCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 72 bp AAAATACCACTCTCTGTGATGGCTACATCTAAGCCTTaGAAGGTGAGCTGTGGACATACCACATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: KIPLSVMATSKP*KVSCGHTTCGQ
Trigger: CTGTCCACATGTGGTATGTCCACAGCTCACCTTCAAAGGCTTAGATGTAGCCATCACAGAGAGTGGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGGTCTGCGATGCTGGTaGTATAGGGGTCGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEGLRCW*YRGRVA
Trigger: AGCAACACGACCCCTATATCACCAGCATCGCAGACC...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGCTACCACATCAGCCATaGGTTTTGCTATGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLLPHQP*VLLCGD
Trigger: GTCACCGCATAGCAAAACTCATGGCTGATGTGGTAG...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGTTAGCACCGGGGTGGTaGTTTCAGGCTGGACTGAAT +
Preference number: 4 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMLAPGW*FQAGLN
Trigger: ATTCAGTCCAGCCTGAAATCACCACCCCGGTGCTAA...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAGCACCGGGGTGGTaGTTTCAGGCTGGACTGAAT +
Preference number: 4 (lower is better)
Translates to: MLHSETSIITENVTWKTFLAPGW*FQAGLN
Trigger: ATTCAGTCCAGCCTGAAATCACCACCCCGGTGCTAA...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGGCTGTGGGGTCAACCTaGGTTTCTGGAGAAGATCAA +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLAVGST*VSGEDQ
Trigger: TTGATCTTCTCCAGAAACTCAGGTTGACCCCACAGC...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTAAGCCTATTTGTCTCTaGGGCTGGGGCTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSHRLNFRILKLNVLLRSKPICL*GWGSAF
Trigger: AAAGGCAGAGCCCCAGCCTCAGAGACAAATAGGCTT...ACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGAAGCCTATTTGTCTCTaGGGCTGGGGCTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMKPICL*GWGSAF
Trigger: AAAGGCAGAGCCCCAGCCTCAGAGACAAATAGGCTT...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTAGCAGACTTATCCTGTaGCCCGGAGGGCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPSRLIL*PGGHFF
Trigger: GAAGAAATGCCCTCCGGGTCACAGGATAAGTCTGCT...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTCACACCACCAGAGCCTaGCAGTGCCCTATTCAAATG +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPHTTRA*QCPIQM
Trigger: CATTTGAATAGGGCACTGTCAGGCTCTGGTGGTGTG...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp AGGCTGTCTGGGAGGCCTGAGAGTCCATTAAAAGACACCGCATTAACTACAACACTTTTCAAGTCTCCATaGCTTGGGCACTTAAGTTTA +
Preference number: 4 (lower is better)
Translates to: RLSGRPESPLKDTALTTTLFKSP*LGHLSL
Trigger: TAAACTTAAGTGCCCAAGTCATGGAGACTTGAAAAG...TGTTGTAGTTAATGCGGTGTCTTTTAATGGACTCTCAGGCCTCCCAGACAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp TTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCAAGGCAACTGAACTGTaGCTTTCGGGCCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FSNSMFCSEVSMMKPICLKATEL*LSGQGH
Trigger: ATGACCCTGGCCCGAAAGTCACAGTTCAGTTGCCTT...GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp ACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTCCTTTTGATCAGCCATGAGTTTTaGTATGCGGTGACAGTCATT +
Preference number: 4 (lower is better)
Translates to: TQGKEPEWLCQIGPLVLLISHEF*YAVTVI
Trigger: AATGACTGTCACCGCATAGCAAAACTCATGGCTGAT...CAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp AACAAGGATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATTCTTCTACCGTCAGATaGTTGTGTCCAGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: NKDLLVMLHSETSIITENSSTVR*LCPDGA
Trigger: TGCTCCATCTGGACACAAGCATCTGACGGTAGAAGA...ATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCCTGCCTGCATCATGGTaGTGTTTCGAGGTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NFRILKLNVLLRSFHDEALPASW*CFEVSW
Trigger: CCAGCTTACCTCGAAACAGCACCATGATGCAGGCAG...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCAGGCGTGGTCTTCACTaGCTGCATCATGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: MLHSETSIITENVTWKTFRRGLH*LHHGAV
Trigger: AACAGCACCATGATGCAGGCAGTGAAGACCACGCCT...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAACCAGGGTCATCCAGCTaGAATTATCCAGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEPGSSS*NYPGLA
Trigger: GGCCAAGCCTGGATAATTGCAGCTGGATGACCCTGG...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp ACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTCCTTTTGATGAAGAAGAGCTTCTaGCTTAAAGGAACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TQGKEPEWLCQIGPLVLLMKKSF*LKGTRL
Trigger: CAGCCTTGTTCCTTTAAGGCAGAAGCTCTTCTTCAT...CAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCAGGCTGGACTGAATaGTGGGCAGCAGAAGGGACA +
Preference number: 4 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVSGWTE*WAAEGT
Trigger: TGTCCCTTCTGCTGCCCACCATTCAGTCCAGCCTGA...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp AGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGGTGGTGATTTCAGGCTaGACTGAATGGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RILKLNVLLRSFHDEAYLVVISG*TEWWAA
Trigger: TGCTGCCCACCATTCAGTCCAGCCTGAAATCACCAC...CAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTCGGGATTGTGTAGGTTaGAGCATGCTTTTCATTGGA +
Preference number: 4 (lower is better)
Translates to: DLLVMLHSETSIITENVTRDCVG*SMLFIG
Trigger: TCCAATGAAAAGCATGCTCCAACCTACACAATCCCG...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGAGTAGGAGCTTCAGCTaGCAGAGTGGGACTGAGAAC +
Preference number: 4 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMSRSFS*QSGTEN
Trigger: GTTCTCAGTCCCACTCTGCCAGCTGAAGCTCCTACT...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCAATCAGACTGGCATaGCTTAGCTCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEAIRLA*LSSGTG
Trigger: GCCAGTCCCTGAGCTAAGCCATGCCAGTCTGATTGC...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAAGAAATGAGGCCCTGAAGGGGCTCTaGTTGGCAATCAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: ETSIITENVTWKTFLRNEALKGL*LAIRLA
Trigger: TGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGC...CTCATTTCTTAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCGAGAAGATCAACGCTTaGGAGGGATGTGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: NFRILKLNVLLRSFHDEAEKINA*EGCASC
Trigger: ACAGCTGGCACATCCCTCCCAAGCGTTGATCTTCTC...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTCTGCCGGAGAAAAGCTaGCTACCATTGCACCTTTCC +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPLPEKS*LPLHLS
Trigger: GGAAAGGTGCAATGGTAGCCAGCTTTTCTCCGGCAG...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CACCTCATGAATCCCAGGAGGTACACAATGAAGAAGAGCTTCTGCCTTAAAGGATCCAGTCATAGGTTGTaGTTGTCTTTGTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: HLMNPRRYTMKKSFCLKGSSHRL*LSLFLV
Trigger: GACCAAGAACAAAGACAACCACAACCTATGACTGGA...TCCTTTAAGGCAGAAGCTCTTCTTCATTGTGTACCTCCTGGGATTCATGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp CATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATAGATTTGATAGGATGTaGGCATTCCCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HRLNFRILKLNVLLRSFHRFDRM*AFPAPA
Trigger: GGCTGGGGCTGGGAATGCCCACATCCTATCAAATCT...ATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCCCTCTCCATTTCTTCTaGATCCAGACCCACAACTGC +
Preference number: 4 (lower is better)
Translates to: MLHSETSIITENVTWKTFPLHFF*IQTHNC
Trigger: GCAGTTGTGGGTCTGGATTCAGAAGAAATGGAGAGG...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCGCTGTGGGGTCAACCTaGGTTTCTGGAGAAGATCAA +
Preference number: 4 (lower is better)
Translates to: MLHSETSIITENVTWKTFAVGST*VSGEDQ
Trigger: TTGATCTTCTCCAGAAACTCAGGTTGACCCCACAGC...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp TTTACATATTTTCACACTTTGGGCCGGGAAAGTACTCACAGCCTAGGAATACATAGGGCTGGAGATATTTaGGTCACCCATCTGATTCCT +
Preference number: 4 (lower is better)
Translates to: FTYFHTLGRESTHSLGIHRAGDI*VTHLIP
Trigger: AGGAATCAGATGGGTGACTCAAATATCTCCAGCCCT...ATGTATTCCTAGGCTGTGAGTACTTTCCCGGCCCAAAGTGTGAAAATATGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGTTTCCTTCAAAGGTATaGCATGCCTGTGTCCACACC +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMFPSKV*HACVHT
Trigger: GGTGTGGACACAGGCATGTCATACCTTTGAAGGAAA...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCTGTCTGGGAGGCCTaGGAGTCCATTAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEAVWEA*ESIKRH
Trigger: GTGTCTTTTAATGGACTCTCAGGCCTCCCAGACAGC...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp AACAAGGATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATAAATCTCACACCTCATaGATCCCAGGAGGTACACAA +
Preference number: 4 (lower is better)
Translates to: NKDLLVMLHSETSIITENKSHTS*IPGGTQ
Trigger: TTGTGTACCTCCTGGGATTCATGAGGTGTGAGATTT...ATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGTCTTCTACCGTCAGATaGTTGTGTCCAGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMSSTVR*LCPDGA
Trigger: TGCTCCATCTGGACACAAGCATCTGACGGTAGAAGA...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGATCCAGACCCACAACTaGTGGTTGTTCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMIQTHN*WLFLWQ
Trigger: TTGCCAAAGGAACAACCAGCAGTTGTGGGTCTGGAT...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAAGGCGTGGTCTTCACTaGCTGCATCATGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LHSETSIITENVTWKTFLRRGLH*LHHGAV
Trigger: AACAGCACCATGATGCAGGCAGTGAAGACCACGCCT...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAAGCTGGCTACCATTaGACCTTTCCCAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMKAGYH*TFPKWL
Trigger: CAACCACTTGGGAAAGGTGCAATGGTAGCCAGCTTT...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp TTTACATATTTTCACACTTTGGGCCGGGAAAGTACTCACAGCCTAGGAATACATAGACTACACTTGAGGTaGAATCACACCTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: FTYFHTLGRESTHSLGIHRLHLR*NHTYWC
Trigger: GCACCAGTAGGTGTGATTGCACCTCAAGTGTAGTCT...ATGTATTCCTAGGCTGTGAGTACTTTCCCGGCCCAAAGTGTGAAAATATGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp GGAAGCCTTATCATAGATGCTCTTTACTGTCTATCATATCCATTCCTAGCATTACTGGGAGGCATCTCCTaGCAACCTCTCCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: GSLIIDALYCLSYPFLALLGGIS*QPLHFF
Trigger: GAAGAAATGGAGAGGTTGCCAGGAGATGCCTCCCAG...TAATGCTAGGAATGGATATGATAGACAGTAAAGAGCATCTATGATAAGGCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTGTGGTGATTTCAGGCTaGACTGAATGGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVVVISG*TEWWAA
Trigger: TGCTGCCCACCATTCAGTCCAGCCTGAAATCACCAC...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GGAAGCCTTATCATAGATGCTCTTTACTGTCTATCATATCCATTCCTAGCATTAGAGAAGATCAACGCTTaGGAGGGATGTGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSLIIDALYCLSYPFLALEKINA*EGCASC
Trigger: ACAGCTGGCACATCCCTCCCAAGCGTTGATCTTCTC...TAATGCTAGGAATGGATATGATAGACAGTAAAGAGCATCTATGATAAGGCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp AAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGAGGGTCAACCTGAGTTTCTaGAGAAGATCAACGCTTGGG +
Preference number: 4 (lower is better)
Translates to: KLNVLLRSFHDEAYLSLRVNLSF*RRSTLG
Trigger: CCCAAGCGTTGATCTTCTCCAGAAACTCAGGTTGAC...CCTCAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTCCAGTCATAGGTTGTaGTTGTCTTTGTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: DLLVMLHSETSIITENVTSSHRL*LSLFLV
Trigger: GACCAAGAACAAAGACAACCACAACCTATGACTGGA...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp AGGCTGTCTGGGAGGCCTGAGAGTCCATTAAAAGACACCGCATTAACTACAACAACAGTATTGCGCTCATaGAACAAAAATCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RLSGRPESPLKDTALTTTTVLRS*NKNLAV
Trigger: TACAGCAAGATTTTTGTTCCATGAGCGCAATACTGT...TGTTGTAGTTAATGCGGTGTCTTTTAATGGACTCTCAGGCCTCCCAGACAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 72 bp ACACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATaGGTCCACTGGTCCTTTTGTCAAAGTGTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: TLKERNQNGFVR*VHWSFCQSVKE
Trigger: TTCCTTAACACTTTGACAAAAGGACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
3UTR CAA 72 bp TTTGGGCCGGGAAAGTACTCACAGCCTAGGAATACATaGGTAGAGTTCGGAATCACATTTTCTTTTAACTCC +
Preference number: 4 (lower is better)
Translates to: FGPGKYSQPRNT*VEFGITFSFNS
Trigger: GGAGTTAAAAGAAAATGTGATTCCGAACTCTACCAATGTATTCCTAGGCTGTGAGTACTTTCCCGGCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp TATATAAATTTGGGAGGTGAAACAGGTTTACCCTTTTCAAGTCTCCATGACTTGCCTCTCCATTTCTTCTaGATCCAGACCCACAACTGC +
Preference number: 4 (lower is better)
Translates to: YINLGGETGLPFSSLHDLPLHFF*IQTHNC
Trigger: GCAGTTGTGGGTCTGGATTCAGAAGAAATGGAGAGG...CAAGTCATGGAGACTTGAAAAGGGTAAACCTGTTTCACCTCCCAAATTTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp ATGAGTCTCTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCACAAGGATCTGCTGGTaGTGCTTCACAGTGAAACCT +
Preference number: 4 (lower is better)
Translates to: MSLFLIGSISGFSNSMFCTRICW*CFTVKP
Trigger: AGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGT...GCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAGAGACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp TTTACATATTTTCACACTTTGGGCCGGGAAAGTACTCACAGCCTAGGAATACATCTTATGCTAGCTGGTTaGGCCAATTGGGTTTTTACC +
Preference number: 4 (lower is better)
Translates to: FTYFHTLGRESTHSLGIHLMLAG*ANWVFT
Trigger: GGTAAAAACCCAATTGGCTCAACCAGCTAGCATAAG...ATGTATTCCTAGGCTGTGAGTACTTTCCCGGCCCAAAGTGTGAAAATATGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATCCAGACCCACAACTaGTGGTTGTTCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMIQTHN*WLFLWQ
Trigger: TTGCCAAAGGAACAACCAGCAGTTGTGGGTCTGGAT...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTGTGGTCTTCACTGCCTaGATCATGGTGCTGTTTCGA +
Preference number: 4 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVVVFTA*IMVLFR
Trigger: TCGAAACAGCACCATGATGCAGGCAGTGAAGACCAC...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp AACAAGGATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGATAACACCTTAGGCTaGACAAATACTTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: NKDLLVMLHSETSIITENDNTLG*TNTSGS
Trigger: GGATCCTGAAGTATTTGTGCAGCCTAAGGTGTTATC...ATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp TTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCGATCTTGTAACTGTCTaGTGGAAAACACTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: FSNSMFCSEVSMMKPICLDLVTV*WKTLGA
Trigger: GGCCCCAAGTGTTTTCCAGCAGACAGTTACAAGATC...GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTGATCTTGTAACTGTCTaGTGGAAAACACTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPDLVTV*WKTLGA
Trigger: GGCCCCAAGTGTTTTCCAGCAGACAGTTACAAGATC...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTACTTCTAGAGTCTCGGTaGTTCCCAGATTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LHSETSIITENVTWKTFLLLESR*FPDWRA
Trigger: AGCTCTCCAATCTGGGAAGCACCGAGACTCTAGAAG...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTACAGAGTGGTCTAAATaGAGGTCTCCTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVTEWSK*RSPGVL
Trigger: CAGAACCCCAGGAGACCTGCATTTAGACCACTCTGT...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTCTCATACTCATCCTTaGCTCTGCTCAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: MLHSETSIITENVTWKTFSHTHP*LCSASP
Trigger: TGGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGA...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTATGCTTGTGTCCAGATaGAGCAGACCTCTCATACTC +
Preference number: 4 (lower is better)
Translates to: LSHRLNFRILKLNVLLRSMLVSR*SRPLIL
Trigger: GAGTATGAGAGGTCTGCTCCATCTGGACACAAGCAT...ACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294241.10
CDS-3UTR CCA 90 bp CTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTCAGACCCACAACTGCTaGTTGTTCCTTTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LSHRLNFRILKLNVLLRSQTHNC*LFLWQR
Trigger: TCTTTGCCAAAGGAACAACCAGCAGTTGTGGGTCTG...ACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp AAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGAGGATGGTAGGAATGAATTaGGCTCTTTCTGGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KLNVLLRSFHDEAYLSLRMVGMN*ALSGRH
Trigger: ATGCCTCCCAGAAAGAGCCCAATTCATTCCTACCAT...CCTCAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTACTTGTAACTGTCTGCTaGAAAACACTTGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LHSETSIITENVTWKTFLLVTVC*KTLGAS
Trigger: GCTGGCCCCAAGTGTTTTCCAGCAGACAGTTACAAG...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATATGGAAGGCTTTCTCTaGCTTTCTGGCGTTCCAATA +
Preference number: 4 (lower is better)
Translates to: HRLNFRILKLNVLLRSFHMEGFL*LSGVPI
Trigger: TATTGGAACGCCAGAAAGTCAGAGAAAGCCTTCCAT...ATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAACTCTGTTCAAAACTTaGCTTGTCAGCCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDETLFKT*LVSPKP
Trigger: GGGCTTTGGGCTGACAAGTCAAGTTTTGAACAGAGT...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCGATTCAAGAATCCCTTaGTTCGTCTGTTCACCGAAG +
Preference number: 4 (lower is better)
Translates to: NFRILKLNVLLRSFHDEADSRIP*FVCSPK
Trigger: CTTCGGTGAACAGACGAATCAAGGGATTCTTGAATC...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp AAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGAGGATCAGCCATGAGTTTTaGTATGCGGTGACAGTCATT +
Preference number: 4 (lower is better)
Translates to: KLNVLLRSFHDEAYLSLRISHEF*YAVTVI
Trigger: AATGACTGTCACCGCATAGCAAAACTCATGGCTGAT...CCTCAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp CATGTTGGTCAGGCTGGGACTTGGGTTCTTAATAAAATACCACTCTCTGTGATGTCAAACTCAATGTTCTaGTCAGAAGTTTCCATGATG +
Preference number: 4 (lower is better)
Translates to: HVGQAGTWVLNKIPLSVMSNSMF*SEVSMM
Trigger: CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGA...CATCACAGAGAGTGGTATTTTATTAAGAACCCAAGTCCCAGCCTGACCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp TTTACATATTTTCACACTTTGGGCCGGGAAAGTACTCACAGCCTAGGAATACATGCTACTTTGCAGAGCTaGCTTCTACTCTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: FTYFHTLGRESTHSLGIHATLQS*LLLCSK
Trigger: TTTTGAACAGAGTAGAAGGCAGCTCTGCAAAGTAGC...ATGTATTCCTAGGCTGTGAGTACTTTCCCGGCCCAAAGTGTGAAAATATGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAATTCAAAGGTATGACATaGCTGTGTCCACACCACCAG +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEFKGMT*LCPHHQ
Trigger: CTGGTGGTGTGGACACAGGCATGTCATACCTTTGAA...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCCGGGATTGTGTAGGTTaGAGCATGCTTTTCATTGGA +
Preference number: 4 (lower is better)
Translates to: NFRILKLNVLLRSFHDEARDCVG*SMLFIG
Trigger: TCCAATGAAAAGCATGCTCCAACCTACACAATCCCG...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp GAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAAGAAATGAGTCACTGCCTGCATCATaGTGCTGTTTCGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: ETSIITENVTWKTFLRNESLPAS*CCFEVS
Trigger: GCTTACCTCGAAACAGCACCATGATGCAGGCAGTGA...CTCATTTCTTAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATGAGTCTCTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTGCACCTTTCCCAAGTaGTTGTGTCTGTATTTGGTC +
Preference number: 4 (lower is better)
Translates to: MSLFLIGSISGFSNSMFCCTFPK*LCLYLV
Trigger: GACCAAATACAGACACAACCACTTGGGAAAGGTGCA...GCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAGAGACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGGTCAGATTGGTCCACTaGTCCTTTTGTCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLVRLVH*SFCQSV
Trigger: AACACTTTGACAAAAGGACCAGTGGACCAATCTGAC...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTGGAAAGGAACCAGAATaGCTTTGTCAGATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPGKEPE*LCQIGP
Trigger: TGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCC...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTTTTGAAGGTGAGCTGTaGACATACCACATGTGGACA +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPFEGEL*TYHMWT
Trigger: TGTCCACATGTGGTATGTCCACAGCTCACCTTCAAA...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTCTTCATGAAGTGTACTaGGGAAGCTGGAATCATTCT +
Preference number: 4 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPLHEVY*GSWNHS
Trigger: AGAATGATTCCAGCTTCCTCAGTACACTTCATGAAG...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGACTTATAAGCTTCCCTaGATTCTGCACAATTCACAC +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLTYKLP*ILHNSH
Trigger: GTGTGAATTGTGCAGAATTCAGGGAAGCTTATAAGT...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp GAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAAGAAATGAGCCAGGAGGTACACAATaGAGAAGAGCTTCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: ETSIITENVTWKTFLRNEPGGTQ*RRASAL
Trigger: TAAGGCAGAAGCTCTTCTTCATTGTGTACCTCCTGG...CTCATTTCTTAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTGGTTCAACTAGATTGTaGATATTTAGTCGATTCACA +
Preference number: 4 (lower is better)
Translates to: DLLVMLHSETSIITENVTGSTRL*IFSRFT
Trigger: TGTGAATCGACTAAATATGCACAATCTAGTTGAACC...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCGATAACACCTTAGGCTaGACAAATACTTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: NFRILKLNVLLRSFHDEADNTLG*TNTSGS
Trigger: GGATCCTGAAGTATTTGTGCAGCCTAAGGTGTTATC...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp TTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCCCTTTAGACTTATTCTaGTCCAGTCATAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: FSNSMFCSEVSMMKPICLPLDLF*SSHRLW
Trigger: CCACAACCTATGACTGGAGCAGAATAAGTCTAAAGG...GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCAACGGAGGGAATCACTaGACACATCTGTTGAATTTG +
Preference number: 4 (lower is better)
Translates to: MLHSETSIITENVTWKTFNGGNH*THLLNL
Trigger: CAAATTCAACAGATGTGTGCAGTGATTCCCTCCGTT...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAATGGTAGGAATGAATTaGGCTCTTTCTGGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEMVGMN*ALSGRH
Trigger: ATGCCTCCCAGAAAGAGCCCAATTCATTCCTACCAT...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCGGTTGTCTTTGTTCTTaGTCAGAACCTGCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: MLHSETSIITENVTWKTFGCLCS*SEPASR
Trigger: TCTACTTGCAGGTTCTGACCAAGAACAAAGACAACC...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp TATATAAATTTGGGAGGTGAAACAGGTTTACCCTTTTCAAGTCTCCATGACTTGTGCAATCACACCTACTaGTGCGTCCACTTTATGGAA +
Preference number: 4 (lower is better)
Translates to: YINLGGETGLPFSSLHDLCNHTY*CVHFME
Trigger: TTCCATAAAGTGGACGCACCAGTAGGTGTGATTGCA...CAAGTCATGGAGACTTGAAAAGGGTAAACCTGTTTCACCTCCCAAATTTATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTACTTCATGAAGTGTACTaGGGAAGCTGGAATCATTCT +
Preference number: 4 (lower is better)
Translates to: LHSETSIITENVTWKTFLLHEVY*GSWNHS
Trigger: AGAATGATTCCAGCTTCCTCAGTACACTTCATGAAG...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp CATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATAACCTCCATTATCACTaGGAATGTCACTTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: HRLNFRILKLNVLLRSFHNLHYH*ECHLEN
Trigger: GTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTT...ATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR TCA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTAAATACCACTCTCTGTaGTGGCTACATCTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVKYHSL*WLHLSL
Trigger: AAGGCTTAGATGTAGCCATCACAGAGAGTGGTATTT...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp TTGCTATGCGGTGACAGTCATTCTTGTCATAAAACCAGATACTATATATCGACAATCAGCCATGAGTTTTaGTATGCGGTGACAGTCATT +
Preference number: 4 (lower is better)
Translates to: LLCGDSHSCHKTRYYISTISHEF*YAVTVI
Trigger: AATGACTGTCACCGCATAGCAAAACTCATGGCTGAT...TGTCGATATATAGTATCTGGTTTTATGACAAGAATGACTGTCACCGCATAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR GCA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAACCTTTAGACTTATTCTaGTCCAGTCATAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEPLDLF*SSHRLW
Trigger: CCACAACCTATGACTGGAGCAGAATAAGTCTAAAGG...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGTCAAACTCAATGTTCTaGTCAGAAGTTTCCATGATG +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLSNSMF*SEVSMM
Trigger: CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGA...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp AACAAGGATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATTCTATACAGAAGAAATaGTTCATGGAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: NKDLLVMLHSETSIITENSIQKK*FMELKF
Trigger: GAATTTCAGCTCCATGAACCATTTCTTCTGTATAGA...ATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCAATCCTTATGCTAGCTaGTTGAGCCAATTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: NFRILKLNVLLRSFHDEANPYAS*LSQLGF
Trigger: AAAACCCAATTGGCTCAACCAGCTAGCATAAGGATT...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCCAAGTCTCCATGACTTaGGCACTTAAGTTTACTTTC +
Preference number: 4 (lower is better)
Translates to: MLHSETSIITENVTWKTFQVSMT*ALKFTF
Trigger: GAAAGTAAACTTAAGTGCCCAAGTCATGGAGACTTG...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTATCTAGGGATTCATTCTaGCCTGAACTTCCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LHSETSIITENVTWKTFLSRDSF*PELPGN
Trigger: ATTACCAGGAAGTTCAGGCCAGAATGAATCCCTAGA...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CCA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTGGTCAGGCTGGGACTTaGGTTCTTAATAAAATACCA +
Preference number: 4 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVGQAGT*VLNKIP
Trigger: TGGTATTTTATTAAGAACCCAAGTCCCAGCCTGACC...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR TCA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGTATAAATTTGGGAGGTaGAACAGGTTTACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMYKFGR*NRFTLF
Trigger: GAAAAGGGTAAACCTGTTTCACCTCCCAAATTTATA...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR GCA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGGGTTCAACTAGATTGTaGATATTTAGTCGATTCACA +
Preference number: 4 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLGSTRL*IFSRFT
Trigger: TGTGAATCGACTAAATATGCACAATCTAGTTGAACC...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR GCA 90 bp CATTCTTGTCATAAAACCAGATACTATATATCGACACTTTGCGAATCTCGAGCATATATATCGACACTTTaGGAATCTCGAGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: HSCHKTRYYISTLCESRAYISTL*ESRADS
Trigger: GGAATCTGCTCGAGATTCGCAAAGTGTCGATATATA...TGCTCGAGATTCGCAAAGTGTCGATATATAGTATCTGGTTTTATGACAAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CCA 90 bp GAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAAGAAATGAGGGTTGTCTTTGTTCTTaGTCAGAACCTGCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: ETSIITENVTWKTFLRNEGCLCS*SEPASR
Trigger: TCTACTTGCAGGTTCTGACCAAGAACAAAGACAACC...CTCATTTCTTAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp TTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTCTATACAGAAGAAATaGTTCATGGAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: FSNSMFCSEVSMMKPICLSIQKK*FMELKF
Trigger: GAATTTCAGCTCCATGAACCATTTCTTCTGTATAGA...GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CCA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGTTATTAGTAATACAATaGCAGTTAGGGCCTCTACTA +
Preference number: 4 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMLLVIQ*QLGPLL
Trigger: TAGTAGAGGCCCTAACTGCCATTGTATTACTAATAA...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS TCA 90 bp CCGCTAGGCTCATCTCCTGCCCAGCTCGACTCAGCGCCTCCATCTTaGATCCCAGAGCCTAGCCCCTCTGGTGGGGGCGGAGTCGCGGAC +
Preference number: 5 (lower is better)
Translates to: PLGSSPAQLDSAPPS*IPEPSPSGGGGVAD
Trigger: GTCCGCGACTCCGCCCCCACCAGAGGGGCTAGGCTCTGGGATTCAAGATGGAGGCGCTGAGTCGAGCTGGGCAGGAGATGAGCCTAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560624.5
CDS-3UTR CAA 90 bp ATGTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTGTTTGTTTGTCCCGAGCAGCTaGCTGGGATCGCCGTGTCTC +
Preference number: 5 (lower is better)
Translates to: MSMGLWSLQPLAWLGLCLFVPSS*LGSPCL
Trigger: GAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAA...CAAACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS CCA 90 bp GTGCCAGCTGTGTTCGTCACGTTCAATGGGGCCCTGAAGGGGCTCTaGTTGGCAATCAGACTGGCATGGCTTAGCTCAGGGACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: VPAVFVTFNGALKGL*LAIRLAWLSSGTGW
Trigger: CCAGCCAGTCCCTGAGCTAAGCCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAACACAGCTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp ATCTCCAGGATGTCGATGGGCCTGTGGTCGCTGCAGCCATTGGCCTGGCTGGGACTCTCATACTCATCCTaGGCTCTGCTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: ISRMSMGLWSLQPLAWLGLSYSS*ALLSIS
Trigger: GGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGAG...TCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACATCCTGGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS TCA 90 bp TTGGGAGGGATGTGCCAGCTGTGTTCGTCACGTTCAATGGGGCCCTaGAGGGGCTCTGGTTGGCAATCAGACTGGCATGGCTTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: LGGMCQLCSSRSMGP*RGSGWQSDWHGLAQ
Trigger: CTGAGCTAAGCCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAACACAGCTGGCACATCCCTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS GCA 90 bp GCTTGTGTCCAGATGGAGCAGACCTCTCATACTCATCCTTGGCTCTaGTCAGCATCTCCAGGATGTCGATGGGCCTGTGGTCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ACVQMEQTSHTHPWL*SASPGCRWACGRCS
Trigger: GCTGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGAGGTCTGCTCCATCTGGACACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294241.10
CDS CCA 90 bp CTCTGGTTGGCAATCAGACTGGCATGGCTTAGCTCAGGGACTGGCTaGTTCAGGAGTGGAGACCTCTGTCTAGGCGTGGTCTTCACTGCC +
Preference number: 5 (lower is better)
Translates to: LWLAIRLAWLSSGTG*FRSGDLCLGVVFTA
Trigger: GGCAGTGAAGACCACGCCTAGACAGAGGTCTCCACTCCTGAACCAGCCAGTCCCTGAGCTAAGCCATGCCAGTCTGATTGCCAACCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 90 bp TTCAATGGGGCCCTGAAGGGGCTCTGGTTGGCAATCAGACTGGCATaGCTTAGCTCAGGGACTGGCTGGTTCAGGAGTGGAGACCTCTGT +
Preference number: 5 (lower is better)
Translates to: FNGALKGLWLAIRLA*LSSGTGWFRSGDLC
Trigger: ACAGAGGTCTCCACTCCTGAACCAGCCAGTCCCTGAGCTAAGCCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 90 bp ATCAACGCTTGGGAGGGATGTGCCAGCTGTGTTCGTCACGTTCAATaGGGCCCTGAAGGGGCTCTGGTTGGCAATCAGACTGGCATGGCT +
Preference number: 5 (lower is better)
Translates to: INAWEGCASCVRHVQ*GPEGALVGNQTGMA
Trigger: AGCCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAACACAGCTGGCACATCCCTCCCAAGCGTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp GCTTGCTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGTTTTGCTTGGTCGCTGCAGCCATaGGCCTGGCTGGGACTCTGT +
Preference number: 5 (lower is better)
Translates to: ACWDRRVSSSTTSAMSFAWSLQP*AWLGLC
Trigger: ACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCA...AGCAAAACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS CCA 90 bp GTGATGGAGGCTGGAGTGATTAGCACCGGGGTGGTGATTTCAGGCTaGACTGAATGGTGGGCAGCAGAAGGGACACCCAGGGTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: VMEAGVISTGVVISG*TEWWAAEGTPRVSD
Trigger: ATCAGAAACCCTGGGTGTCCCTTCTGCTGCCCACCATTCAGTCCAGCCTGAAATCACCACCCCGGTGCTAATCACTCCAGCCTCCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp AGCTTGCTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGTTTTGCTGGCTGGGACTCTGTTaGTCCCGAGCAGCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLLGSPCLLFYHISHEFCWLGLC*SRAACW
Trigger: CCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCA...GCAAAACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS TCA 90 bp GCTGTCTTAGAGGGAGGCTCTATGAAGCTCTCAGGTGTGGCTAGCTaGCCAGCTGCCGGAGAAAAGCTGGCTACCATTGCACCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: AVLEGGSMKLSGVAS*PAAGEKLATIAPFP
Trigger: TGGGAAAGGTGCAATGGTAGCCAGCTTTTCTCCGGCAGCTGGTCAGCTAGCCACACCTGAGAGCTTCATAGAGCCTCCCTCTAAGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS GCA 90 bp CAGACTTATCCTGTGACCCGGAGGGCATTTCTTCTAGAGTCTCGGTaGTTCCCAGATTGGAGAGCTGAGTGCTTGGCTGTAACCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QTYPVTRRAFLLESR*FPDWRAECLAVTQG
Trigger: GCCCTGGGTTACAGCCAAGCACTCAGCTCTCCAATCTGGGAAGCACCGAGACTCTAGAAGAAATGCCCTCCGGGTCACAGGATAAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560624.5
ENST00000610213.6
CDS CCA 90 bp GTCATGCTGTGGGGTCAACCTGAGTTTCTGGAGAAGATCAACGCTTaGGAGGGATGTGCCAGCTGTGTTCGTCACGTTCAATGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: VMLWGQPEFLEKINA*EGCASCVRHVQWGP
Trigger: AGGGCCCCATTGAACGTGACGAACACAGCTGGCACATCCCTCCCAAGCGTTGATCTTCTCCAGAAACTCAGGTTGACCCCACAGCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 90 bp GTGACCCGGAGGGCATTTCTTCTAGAGTCTCGGTGCTTCCCAGATTaGAGAGCTGAGTGCTTGGCTGTAACCCAGGGCTGGAGATATTTG +
Preference number: 5 (lower is better)
Translates to: VTRRAFLLESRCFPD*RAECLAVTQGWRYL
Trigger: CAAATATCTCCAGCCCTGGGTTACAGCCAAGCACTCAGCTCTCCAATCTGGGAAGCACCGAGACTCTAGAAGAAATGCCCTCCGGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560624.5
ENST00000610213.6
CDS TCA 90 bp GAGGGCATTTCTTCTAGAGTCTCGGTGCTTCCCAGATTGGAGAGCTaGGTGCTTGGCTGTAACCCAGGGCTGGAGATATTTGAGTCACCC +
Preference number: 5 (lower is better)
Translates to: EGISSRVSVLPRLES*VLGCNPGLEIFESP
Trigger: GGGTGACTCAAATATCTCCAGCCCTGGGTTACAGCCAAGCACTCAGCTCTCCAATCTGGGAAGCACCGAGACTCTAGAAGAAATGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560624.5
ENST00000610213.6
CDS CCA 90 bp GAGCTGGCTTTCCTCTCAAGGTCCGAAGATCTTGTAACTGTCTGCTaGAAAACACTTGGGGCCAGCAGGACTGAAGACACTGCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: ELAFLSRSEDLVTVC*KTLGASRTEDTAVV
Trigger: GACCACTGCAGTGTCTTCAGTCCTGCTGGCCCCAAGTGTTTTCCAGCAGACAGTTACAAGATCTTCGGACCTTGAGAGGAAAGCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294241.10
ENST00000558034.1
ENST00000610213.6
CDS TCA 90 bp GGGCTCTTTCTGGGAGGCATCTCCTGGCAACCTCTCCATTTCTTCTaGATCCAGACCCACAACTGCTGGTTGTTCCTTTGGCAAAGAGGT +
Preference number: 5 (lower is better)
Translates to: GLFLGGISWQPLHFF*IQTHNCWLFLWQRG
Trigger: ACCTCTTTGCCAAAGGAACAACCAGCAGTTGTGGGTCTGGATTCAGAAGAAATGGAGAGGTTGCCAGGAGATGCCTCCCAGAAAGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294241.10
ENST00000560624.5
ENST00000610213.6
CDS TCA 90 bp TGGACTGAATGGTGGGCAGCAGAAGGGACACCCAGGGTTTCTGATTaGGGGGCTCCTCCTAACTGCTCAAAGGGAAATGGTAGGAATGAA +
Preference number: 5 (lower is better)
Translates to: WTEWWAAEGTPRVSD*GAPPNCSKGNGRNE
Trigger: TTCATTCCTACCATTTCCCTTTGAGCAGTTAGGAGGAGCCCCTCAATCAGAAACCCTGGGTGTCCCTTCTGCTGCCCACCATTCAGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS TCA 90 bp TCCCAAGTGGTTGTGTCTGTATTTGGTCATGCTGTGGGGTCAACCTaGGTTTCTGGAGAAGATCAACGCTTGGGAGGGATGTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SQVVVSVFGHAVGST*VSGEDQRLGGMCQL
Trigger: CAGCTGGCACATCCCTCCCAAGCGTTGATCTTCTCCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAGACACAACCACTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 90 bp TGGCAGAGTGGGACTGAGAACAGGGCTCAACGGGATTGTGTAGGTTaGAGCATGCTTTTCATTGGACTGTGTGATGGAGGCTGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: WQSGTENRAQRDCVG*SMLFIGLCDGGWSD
Trigger: ATCACTCCAGCCTCCATCACACAGTCCAATGAAAAGCATGCTCCAACCTACACAATCCCGTTGAGCCCTGTTCTCAGTCCCACTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp TCAGTACACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTTTTGTCCCGAGCAGCTaGCTGGGATCGCCGTGTCTC +
Preference number: 5 (lower is better)
Translates to: SVHSRKGTRMALSDWSTGFVPSS*LGSPCL
Trigger: GAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAA...ACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGTGTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp CACCTCATGAATCCCAGGAGGTACACAATGAAGAAGAGCTTCTGCCTTAAAGGATGGCTGGGACTCTGTTaGTCCCGAGCAGCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: HLMNPRRYTMKKSFCLKGWLGLC*SRAACW
Trigger: CCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCA...TCCTTTAAGGCAGAAGCTCTTCTTCATTGTGTACCTCCTGGGATTCATGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp AAACTTGACTTGTCAGCCCAAAGCCCGTTTCTATGGGGTAGGCTGGGGGAAGCGGCTACATCTAAGCCTTaGAAGGTGAGCTGTGGACAT +
Preference number: 5 (lower is better)
Translates to: KLDLSAQSPFLWGRLGEAATSKP*KVSCGH
Trigger: ATGTCCACAGCTCACCTTCAAAGGCTTAGATGTAGC...CGCTTCCCCCAGCCTACCCCATAGAAACGGGCTTTGGGCTGACAAGTCAAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS GCA 90 bp GCATTTCTTCTAGAGTCTCGGTGCTTCCCAGATTGGAGAGCTGAGTaGTTGGCTGTAACCCAGGGCTGGAGATATTTGAGTCACCCATCT +
Preference number: 5 (lower is better)
Translates to: AFLLESRCFPDWRAE*LAVTQGWRYLSHPS
Trigger: AGATGGGTGACTCAAATATCTCCAGCCCTGGGTTACAGCCAAGCACTCAGCTCTCCAATCTGGGAAGCACCGAGACTCTAGAAGAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560624.5
ENST00000610213.6
CDS CCA 90 bp GAGGGGCTCCTCCTAACTGCTCAAAGGGAAATGGTAGGAATGAATTaGGCTCTTTCTGGGAGGCATCTCCTGGCAACCTCTCCATTTCTT +
Preference number: 5 (lower is better)
Translates to: EGLLLTAQREMVGMN*ALSGRHLLATSPFL
Trigger: AAGAAATGGAGAGGTTGCCAGGAGATGCCTCCCAGAAAGAGCCCAATTCATTCCTACCATTTCCCTTTGAGCAGTTAGGAGGAGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294241.10
ENST00000560624.5
ENST00000610213.6
CDS-3UTR CAA 90 bp TCAGTACACTCAAGGAAAGGAACCAGAATGGCTTTGTCAGATTGGTCCACTGGTGGAGAAGATCAACGCTaGGGAGGGATGTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SVHSRKGTRMALSDWSTGGEDQR*GGMCQL
Trigger: CAGCTGGCACATCCCTCCCAAGCGTTGATCTTCTCC...ACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCCTTTCCTTGAGTGTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp AGCTTGCTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGTTTTGCACAGCTCTGAGCCTCTaGTTTTCTCAACAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: SLLGSPCLLFYHISHEFCTALSL*FSQQLA
Trigger: TGCAAGCTGTTGAGAAAACAAGAGGCTCAGAGCTGT...GCAAAACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS GCA 90 bp GCTACCATTGCACCTTTCCCAAGTGGTTGTGTCTGTATTTGGTCATaGTGTGGGGTCAACCTGAGTTTCTGGAGAAGATCAACGCTTGGG +
Preference number: 5 (lower is better)
Translates to: ATIAPFPSGCVCIWS*CGVNLSFWRRSTLG
Trigger: CCCAAGCGTTGATCTTCTCCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAGACACAACCACTTGGGAAAGGTGCAATGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS GCA 90 bp TGTTCCTTTGGCAAAGAGGTTCCAAATAACTCTTCTACCGTCAGATaGTTGTGTCCAGATGGAGCAGACTTATCCTGTGACCCGGAGGGC +
Preference number: 5 (lower is better)
Translates to: CSFGKEVPNNSSTVR*LCPDGADLSCDPEG
Trigger: GCCCTCCGGGTCACAGGATAAGTCTGCTCCATCTGGACACAAGCATCTGACGGTAGAAGAGTTATTTGGAACCTCTTTGCCAAAGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560624.5
ENST00000610213.6
CDS CCA 90 bp CATTGCACCTTTCCCAAGTGGTTGTGTCTGTATTTGGTCATGCTGTaGGGTCAACCTGAGTTTCTGGAGAAGATCAACGCTTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: HCTFPKWLCLYLVML*GQPEFLEKINAWEG
Trigger: TCCCTCCCAAGCGTTGATCTTCTCCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAGACACAACCACTTGGGAAAGGTGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 90 bp TGCTTCCCAGATTGGAGAGCTGAGTGCTTGGCTGTAACCCAGGGCTaGAGATATTTGAGTCACCCATCTGATTCCTCTCATACTCATCCT +
Preference number: 5 (lower is better)
Translates to: CFPDWRAECLAVTQG*RYLSHPSDSSHTHP
Trigger: AGGATGAGTATGAGAGGAATCAGATGGGTGACTCAAATATCTCCAGCCCTGGGTTACAGCCAAGCACTCAGCTCTCCAATCTGGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560624.5
ENST00000610213.6
CDS-3UTR CAA 90 bp AACAAGGATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATTGGAGAGCTGAGTGCTaGGCTGTAACCCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NKDLLVMLHSETSIITENWRAEC*AVTQGW
Trigger: CCAGCCCTGGGTTACAGCCAAGCACTCAGCTCTCCA...ATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATCCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS CCA 90 bp AAGCTGGCTACCATTGCACCTTTCCCAAGTGGTTGTGTCTGTATTTaGTCATGCTGTGGGGTCAACCTGAGTTTCTGGAGAAGATCAACG +
Preference number: 5 (lower is better)
Translates to: KLATIAPFPSGCVCI*SCCGVNLSFWRRST
Trigger: CGTTGATCTTCTCCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAGACACAACCACTTGGGAAAGGTGCAATGGTAGCCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp AAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGAGGGTCTTCTCCCACTGGTaGGCCTTGGGGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: KLNVLLRSFHDEAYLSLRVFSHW*ALGQKV
Trigger: CACCTTCTGCCCCAAGGCCAACCAGTGGGAGAAGAC...CCTCAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CGAGCAGCTTGCTGGGATCGCCGTGTCTCCTCTTCTACCACATCAGCCATGAGTACTGGTTCAACTAGATaGTGCATATTTAGTCGATTC +
Preference number: 5 (lower is better)
Translates to: RAACWDRRVSSSTTSAMSTGSTR*CIFSRF
Trigger: GAATCGACTAAATATGCACAATCTAGTTGAACCAGT...ACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CAA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGTTTGTCCCGAGCAGCTaGCTGGGATCGCCGTGTCTC +
Preference number: 5 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMFVPSS*LGSPCL
Trigger: GAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAA...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp ATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTTGGTCGCTGCAGCCATaGGCCTGGCTGGGACTCTGT +
Preference number: 5 (lower is better)
Translates to: ISGFSNSMFCSEVSMMKPWSLQP*AWLGLC
Trigger: ACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCA...AGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp AGGCTGTCTGGGAGGCCTGAGAGTCCATTAAAAGACACCGCATTAACTACAACAGGAGCATGCTTTTCATaGGACTGTGTGATGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RLSGRPESPLKDTALTTTGACFS*DCVMEA
Trigger: AGCCTCCATCACACAGTCCAATGAAAAGCATGCTCC...TGTTGTAGTTAATGCGGTGTCTTTTAATGGACTCTCAGGCCTCCCAGACAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS GCA 90 bp AGCCTATTTGTCTCTGAGGCTGGGGCTCTGCCTTTAGACTTATTCTaGTCCAGTCATAGGTTGTGGTTGTCTTTGTTCTTGGTCAGAACC +
Preference number: 5 (lower is better)
Translates to: SLFVSEAGALPLDLF*SSHRLWLSLFLVRT
Trigger: GGTTCTGACCAAGAACAAAGACAACCACAACCTATGACTGGAGCAGAATAAGTCTAAAGGCAGAGCCCCAGCCTCAGAGACAAATAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294241.10
ENST00000558034.1
ENST00000610213.6
CDS-3UTR CAA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGGTCTTCTCCCACTGGTaGGCCTTGGGGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMVFSHW*ALGQKV
Trigger: CACCTTCTGCCCCAAGGCCAACCAGTGGGAGAAGAC...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAATGGTCGCTGCAGCCATaGGCCTGGCTGGGACTCTGT +
Preference number: 5 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEWSLQP*AWLGLC
Trigger: ACAGAGTCCCAGCCAGGCCAATGGCTGCAGCGACCA...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp GATCTGCTGGTGATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTCTACCGTCAGATGCTaGTGTCCAGATGGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: DLLVMLHSETSIITENVTSTVRC*CPDGAD
Trigger: GTCTGCTCCATCTGGACACAAGCATCTGACGGTAGA...AGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCATCACCAGCAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGGGAGAAGATCAACGCTaGGGAGGGATGTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLGEDQR*GGMCQL
Trigger: CAGCTGGCACATCCCTCCCAAGCGTTGATCTTCTCC...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp AAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGAGGTGGGGTTTCACCATGTaGGTCAGGCTGGGACTTGGG +
Preference number: 5 (lower is better)
Translates to: KLNVLLRSFHDEAYLSLRWGFTM*VRLGLG
Trigger: CCCAAGTCCCAGCCTGACCAACATGGTGAAACCCCA...CCTCAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS GCA 90 bp TGTTCCTTTGGCAAAGAGGTTCCAAATAACTCTTCTACCGTCAGATaGTTGTGTCCAGATGGAGCAGACCTCTCATACTCATCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: CSFGKEVPNNSSTVR*LCPDGADLSYSSLA
Trigger: AGCCAAGGATGAGTATGAGAGGTCTGCTCCATCTGGACACAAGCATCTGACGGTAGAAGAGTTATTTGGAACCTCTTTGCCAAAGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294241.10
CDS-3UTR CAA 90 bp CATGAGTTTTGCTATGCGGTGACAGTCATTCTTGTCATAAAACCAGATACTATAGTCTTCTCCCACTGGTaGGCCTTGGGGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: HEFCYAVTVILVIKPDTIVFSHW*ALGQKV
Trigger: CACCTTCTGCCCCAAGGCCAACCAGTGGGAGAAGAC...TATAGTATCTGGTTTTATGACAAGAATGACTGTCACCGCATAGCAAAACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CAA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTATGGCTGGGACTCTGTTaGTCCCGAGCAGCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LHSETSIITENVTWKTFLWLGLC*SRAACW
Trigger: CCAGCAAGCTGCTCGGGACAAACAGAGTCCCAGCCA...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATCTGAAGGGGCTCTGGTaGGCAATCAGACTGGCATGG +
Preference number: 5 (lower is better)
Translates to: HRLNFRILKLNVLLRSFHLKGLW*AIRLAW
Trigger: CCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAG...ATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CACCTCATGAATCCCAGGAGGTACACAATGAAGAAGAGCTTCTGCCTTAAAGGATGGTTGTGTCTGTATTaGGTCATGCTGTGGGGTCAA +
Preference number: 5 (lower is better)
Translates to: HLMNPRRYTMKKSFCLKGWLCLY*VMLWGQ
Trigger: TTGACCCCACAGCATGACCAAATACAGACACAACCA...TCCTTTAAGGCAGAAGCTCTTCTTCATTGTGTACCTCCTGGGATTCATGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGTCTACCGTCAGATGCTaGTGTCCAGATGGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMSTVRC*CPDGAD
Trigger: GTCTGCTCCATCTGGACACAAGCATCTGACGGTAGA...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp ATGAGTCTCTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCCAGGGCTCAACGGGATaGTGTAGGTTGGAGCATGCT +
Preference number: 5 (lower is better)
Translates to: MSLFLIGSISGFSNSMFCQGSTG*CRLEHA
Trigger: AGCATGCTCCAACCTACACAATCCCGTTGAGCCCTG...GCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAGAGACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGCAGGGCTCAACGGGATaGTGTAGGTTGGAGCATGCT +
Preference number: 5 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMQGSTG*CRLEHA
Trigger: AGCATGCTCCAACCTACACAATCCCGTTGAGCCCTG...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTCTGAAGGGGCTCTGGTaGGCAATCAGACTGGCATGG +
Preference number: 5 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVLKGLW*AIRLAW
Trigger: CCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAG...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGTCTGCTGGAAAACACTaGGGGCCAGCAGGACTGAAG +
Preference number: 5 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMSAGKH*GPAGLK
Trigger: CTTCAGTCCTGCTGGCCCCAAGTGTTTTCCAGCAGA...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CACCTCATGAATCCCAGGAGGTACACAATGAAGAAGAGCTTCTGCCTTAAAGGATACTCTGTTCAAAACTaGACTTGTCAGCCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: HLMNPRRYTMKKSFCLKGYSVQN*TCQPKA
Trigger: GGCTTTGGGCTGACAAGTCAAGTTTTGAACAGAGTA...TCCTTTAAGGCAGAAGCTCTTCTTCATTGTGTACCTCCTGGGATTCATGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTCTGGGCTGCTCCTCTaGGAGTCTACACTTAGACCC +
Preference number: 5 (lower is better)
Translates to: NFRILKLNVLLRSFHDEASGLLL*ESTLRP
Trigger: GGGTCTAAGTGTAGACTCCAAGAGGAGCAGCCCAGA...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp CTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTCTCTCATACTCATCCTaGGCTCTGCTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: LSHRLNFRILKLNVLLRSLSYSS*ALLSIS
Trigger: GGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGAG...ACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGCTCTCATACTCATCCTaGGCTCTGCTCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMLSYSS*ALLSIS
Trigger: GGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGAG...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTCATGATGAAGCCTATTaGTCTCTGAGGCTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: LSHRLNFRILKLNVLLRSHDEAY*SLRLGL
Trigger: GAGCCCCAGCCTCAGAGACAAATAGGCTTCATCATG...ACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGCAGGGCTGGAGATATTaGAGTCACCCATCTGATTCC +
Preference number: 5 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMQGWRY*SHPSDS
Trigger: GGAATCAGATGGGTGACTCAAATATCTCCAGCCCTG...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp GAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAAGAAATGAGTCTGCTGGAAAACACTaGGGGCCAGCAGGACTGAAG +
Preference number: 5 (lower is better)
Translates to: ETSIITENVTWKTFLRNESAGKH*GPAGLK
Trigger: CTTCAGTCCTGCTGGCCCCAAGTGTTTTCCAGCAGA...CTCATTTCTTAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp GGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAGGTTGTGGTTGTCTTaGTTCTTGGTCAGAACCTGC +
Preference number: 5 (lower is better)
Translates to: GSISGFSNSMFCSEVSMMRLWLS*FLVRTC
Trigger: GCAGGTTCTGACCAAGAACAAAGACAACCACAACCT...CATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAACATGATGAAGCCTATTaGTCTCTGAGGCTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEHDEAY*SLRLGL
Trigger: GAGCCCCAGCCTCAGAGACAAATAGGCTTCATCATG...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp TTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCGGAACCAGAATGGCTTaGTCAGATTGGTCCACTGGT +
Preference number: 5 (lower is better)
Translates to: FSNSMFCSEVSMMKPICLGTRMA*SDWSTG
Trigger: ACCAGTGGACCAATCTGACAAAGCCATTCTGGTTCC...GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTGGAGCATGCTTTTCATaGGACTGTGTGATGGAGGCT +
Preference number: 5 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVGACFS*DCVMEA
Trigger: AGCCTCCATCACACAGTCCAATGAAAAGCATGCTCC...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATACGGGATTGTGTAGGTaGGAGCATGCTTTTCATTGG +
Preference number: 5 (lower is better)
Translates to: HRLNFRILKLNVLLRSFHTGLCR*EHAFHW
Trigger: CCAATGAAAAGCATGCTCCAACCTACACAATCCCGT...ATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp ATGCTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCACGGGATTGTGTAGGTaGGAGCATGCTTTTCATTGG +
Preference number: 5 (lower is better)
Translates to: MLHSETSIITENVTWKTFTGLCR*EHAFHW
Trigger: CCAATGAAAAGCATGCTCCAACCTACACAATCCCGT...GAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTGGTTGTGTCTGTATTaGGTCATGCTGTGGGGTCAA +
Preference number: 5 (lower is better)
Translates to: LSHRLNFRILKLNVLLRSWLCLY*VMLWGQ
Trigger: TTGACCCCACAGCATGACCAAATACAGACACAACCA...ACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGTGCTCCAGTCATAGGTaGTGGTTGTCTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LKLNVLLRSFHDEAYLSLCSSHR*WLSLFL
Trigger: CAAGAACAAAGACAACCACAACCTATGACTGGAGCA...CAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp TTGCTATGCGGTGACAGTCATTCTTGTCATAAAACCAGATACTATATATCGACACAGGGCTGGAGATATTaGAGTCACCCATCTGATTCC +
Preference number: 5 (lower is better)
Translates to: LLCGDSHSCHKTRYYISTQGWRY*SHPSDS
Trigger: GGAATCAGATGGGTGACTCAAATATCTCCAGCCCTG...TGTCGATATATAGTATCTGGTTTTATGACAAGAATGACTGTCACCGCATAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CAA 90 bp TTTACATATTTTCACACTTTGGGCCGGGAAAGTACTCACAGCCTAGGAATACATAGCTGGTTGAGCCAATaGGGTTTTTACCCCATCATT +
Preference number: 5 (lower is better)
Translates to: FTYFHTLGRESTHSLGIHSWLSQ*GFYPII
Trigger: AATGATGGGGTAAAAACCCAATTGGCTCAACCAGCT...ATGTATTCCTAGGCTGTGAGTACTTTCCCGGCCCAAAGTGTGAAAATATGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp TATATAAATTTGGGAGGTGAAACAGGTTTACCCTTTTCAAGTCTCCATGACTTGCCACTGAGACTACACTaGAGGTGCAATCACACCTAC +
Preference number: 5 (lower is better)
Translates to: YINLGGETGLPFSSLHDLPLRLH*RCNHTY
Trigger: GTAGGTGTGATTGCACCTCAAGTGTAGTCTCAGTGG...CAAGTCATGGAGACTTGAAAAGGGTAAACCTGTTTCACCTCCCAAATTTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCCTGCTGGTTGTTCCTTaGGCAAAGAGGTTCCAAATA +
Preference number: 5 (lower is better)
Translates to: NFRILKLNVLLRSFHDEALLVVP*AKRFQI
Trigger: TATTTGGAACCTCTTTGCCAAAGGAACAACCAGCAG...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp TTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCACCTTTCCCAAGTGGTaGTGTCTGTATTTGGTCATG +
Preference number: 5 (lower is better)
Translates to: FSNSMFCSEVSMMKPICLTFPKW*CLYLVM
Trigger: CATGACCAAATACAGACACAACCACTTGGGAAAGGT...GAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTAGGTTGTGGTTGTCTTaGTTCTTGGTCAGAACCTGC +
Preference number: 5 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVRLWLS*FLVRTC
Trigger: GCAGGTTCTGACCAAGAACAAAGACAACCACAACCT...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp GGAAGCCTTATCATAGATGCTCTTTACTGTCTATCATATCCATTCCTAGCATTACCTTATTCCACAGCCTaGCTCCTAGCTGATGAAAAC +
Preference number: 5 (lower is better)
Translates to: GSLIIDALYCLSYPFLALPYSTA*LLADEN
Trigger: GTTTTCATCAGCTAGGAGCAAGGCTGTGGAATAAGG...TAATGCTAGGAATGGATATGATAGACAGTAAAGAGCATCTATGATAAGGCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp AATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTGTTCAAAACTTGACTaGTCAGCCCAAAGCCCGTTT +
Preference number: 5 (lower is better)
Translates to: NFRILKLNVLLRSFHDEACSKLD*SAQSPF
Trigger: AAACGGGCTTTGGGCTGACAAGTCAAGTTTTGAACA...GGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp AGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGAATGGCTTTGTCAGATaGGTCCACTGGTCCTTTTGT +
Preference number: 5 (lower is better)
Translates to: RILKLNVLLRSFHDEAYLNGFVR*VHWSFC
Trigger: ACAAAAGGACCAGTGGACCAATCTGACAAAGCCATT...CAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp ATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGCAGCCTAGGAATACATaGGTAGAGTTCGGAATCACA +
Preference number: 5 (lower is better)
Translates to: IGSISGFSNSMFCSEVSMQPRNT*VEFGIT
Trigger: TGTGATTCCGAACTCTACCAATGTATTCCTAGGCTG...CATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS TCA 90 bp ATATATCGACACTTTGCGAATCTCGAGCAGATTCCTAAACAGCTCTaGGCCTCTTGTTTTCTCAACAGCTTGCATTTCTATACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: IYRHFANLEQIPKQL*ASCFLNSLHFYTEE
Trigger: TTCTTCTGTATAGAAATGCAAGCTGTTGAGAAAACAAGAGGCTCAGAGCTGTTTAGGAATCTGCTCGAGATTCGCAAAGTGTCGATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560076.2
CDS-3UTR CAA 90 bp GGAAGCCTTATCATAGATGCTCTTTACTGTCTATCATATCCATTCCTAGCATTACTGCTGGTTGTTCCTTaGGCAAAGAGGTTCCAAATA +
Preference number: 5 (lower is better)
Translates to: GSLIIDALYCLSYPFLALLLVVP*AKRFQI
Trigger: TATTTGGAACCTCTTTGCCAAAGGAACAACCAGCAG...TAATGCTAGGAATGGATATGATAGACAGTAAAGAGCATCTATGATAAGGCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAACCTTTCCCAAGTGGTaGTGTCTGTATTTGGTCATG +
Preference number: 5 (lower is better)
Translates to: LNFRILKLNVLLRSFHDETFPKW*CLYLVM
Trigger: CATGACCAAATACAGACACAACCACTTGGGAAAGGT...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTGCTCCAGTCATAGGTaGTGGTTGTCTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVCSSHR*WLSLFL
Trigger: CAAGAACAAAGACAACCACAACCTATGACTGGAGCA...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAACATATTTTCACACTTaGGGCCGGGAAAGTACTCAC +
Preference number: 5 (lower is better)
Translates to: LHSETSIITENVTWKTFLTYFHT*GRESTH
Trigger: GTGAGTACTTTCCCGGCCCAAAGTGTGAAAATATGT...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp CTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAACCTTATGCTAGCTGGTaGAGCCAATTGGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: LNFRILKLNVLLRSFHDEPYASW*SQLGFY
Trigger: GTAAAAACCCAATTGGCTCAACCAGCTAGCATAAGG...TTCATCATGGAAACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp AAACTCAATGTTCTGCTCAGAAGTTTCCATGATGAAGCCTATTTGTCTCTGAGGACTGGTTCAACTAGATaGTGCATATTTAGTCGATTC +
Preference number: 5 (lower is better)
Translates to: KLNVLLRSFHDEAYLSLRTGSTR*CIFSRF
Trigger: GAATCGACTAAATATGCACAATCTAGTTGAACCAGT...CCTCAGAGACAAATAGGCTTCATCATGGAAACTTCTGAGCAGAACATTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS-3UTR CAA 90 bp TTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCTCAGAAGTTACACATCTGTTGAATTaGCTGAAAAACAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: FLIGSISGFSNSMFCSEVTHLLN*LKNRLL
Trigger: GAGGAGCCTGTTTTTCAGCAAATTCAACAGATGTGT...AACTTCTGAGCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp ATGAGTCTCTTTCTCATAGGCTCAATTTCAGGATTCTCAAACTCAATGTTCTGCAGTCACTTGAAAAACTaGAATTCAAAGTCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: MSLFLIGSISGFSNSMFCSHLKN*NSKSSR
Trigger: CCTGCTTGACTTTGAATTCAAGTTTTTCAAGTGACT...GCAGAACATTGAGTTTGAGAATCCTGAAATTGAGCCTATGAGAAAGAGACTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp CTTCACAGTGAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTATTCAAACTACATTCTTaGGGGGAGGAGAGTAATAAA +
Preference number: 5 (lower is better)
Translates to: LHSETSIITENVTWKTFLFKLHS*GEESNK
Trigger: TTTATTACTCTCCTCCCCCAAAGAATGTAGTTTGAA...TAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTCACTGTGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS-3UTR CAA 90 bp GAAACCTCCATTATCACTGAGAATGTCACTTGGAAAACATTCTTAAGAAATGAGGAAAAGGACAAATGCTaGACATGCAAAATCTGGTTA +
Preference number: 5 (lower is better)
Translates to: ETSIITENVTWKTFLRNEEKDKC*TCKIWL
Trigger: TAACCAGATTTTGCATGTCAAGCATTTGTCCTTTTC...CTCATTTCTTAAGAATGTTTTCCAAGTGACATTCTCAGTGATAATGGAGGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610213.6
CDS TCA 72 bp TCATCTCCTGCCCAGCTCGACTCAGCGCCTCCATCTTaGATCCCAGAGCCTAGCCCCTCTGGTGGGGGCGGA +
Preference number: 6 (lower is better)
Translates to: SSPAQLDSAPPS*IPEPSPSGGGG
Trigger: TCCGCCCCCACCAGAGGGGCTAGGCTCTGGGATTCAAGATGGAGGCGCTGAGTCGAGCTGGGCAGGAGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560624.5
CDS CCA 72 bp GCTGGAGTGATTAGCACCGGGGTGGTGATTTCAGGCTaGACTGAATGGTGGGCAGCAGAAGGGACACCCAGG +
Preference number: 6 (lower is better)
Translates to: AGVISTGVVISG*TEWWAAEGTPR
Trigger: CCTGGGTGTCCCTTCTGCTGCCCACCATTCAGTCCAGCCTGAAATCACCACCCCGGTGCTAATCACTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 72 bp GCCCTGAAGGGGCTCTGGTTGGCAATCAGACTGGCATaGCTTAGCTCAGGGACTGGCTGGTTCAGGAGTGGA +
Preference number: 6 (lower is better)
Translates to: ALKGLWLAIRLA*LSSGTGWFRSG
Trigger: TCCACTCCTGAACCAGCCAGTCCCTGAGCTAAGCCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CAA 90 bp CCAGCTGTGTTCGTCACGTTCAATGGGGCCCTGAAGGGGCTCTGGTaGGCAATCAGACTGGCATGGCTTAGCTCAGGGACTGGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: PAVFVTFNGALKGLW*AIRLAWLSSGTGWF
Trigger: GAACCAGCCAGTCCCTGAGCTAAGCCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAACACAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS TCA 72 bp ATGTGCCAGCTGTGTTCGTCACGTTCAATGGGGCCCTaGAGGGGCTCTGGTTGGCAATCAGACTGGCATGGC +
Preference number: 6 (lower is better)
Translates to: MCQLCSSRSMGP*RGSGWQSDWHG
Trigger: GCCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAACACAGCTGGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 72 bp GCAATCAGACTGGCATGGCTTAGCTCAGGGACTGGCTaGTTCAGGAGTGGAGACCTCTGTCTAGGCGTGGTC +
Preference number: 6 (lower is better)
Translates to: AIRLAWLSSGTG*FRSGDLCLGVV
Trigger: GACCACGCCTAGACAGAGGTCTCCACTCCTGAACCAGCCAGTCCCTGAGCTAAGCCATGCCAGTCTGATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 72 bp GTGTTCGTCACGTTCAATGGGGCCCTGAAGGGGCTCTaGTTGGCAATCAGACTGGCATGGCTTAGCTCAGGG +
Preference number: 6 (lower is better)
Translates to: VFVTFNGALKGL*LAIRLAWLSSG
Trigger: CCCTGAGCTAAGCCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 72 bp TGGGAGGGATGTGCCAGCTGTGTTCGTCACGTTCAATaGGGCCCTGAAGGGGCTCTGGTTGGCAATCAGACT +
Preference number: 6 (lower is better)
Translates to: WEGCASCVRHVQ*GPEGALVGNQT
Trigger: AGTCTGATTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAACACAGCTGGCACATCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CAA 72 bp GGGGCGCCTGCAACCTGGAGAGTGACAATGGTCATTTaGTACCGAAGTGCAGAAGCCAGTAGCCAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GAPATWRVTMVI*YRSAEASSQAQ
Trigger: CTGGGCCTGGCTACTGGCTTCTGCACTTCGGTACAAAATGACCATTGTCACTCTCCAGGTTGCAGGCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558034.1
CDS TCA 72 bp GAGGGAGGCTCTATGAAGCTCTCAGGTGTGGCTAGCTaGCCAGCTGCCGGAGAAAAGCTGGCTACCATTGCA +
Preference number: 6 (lower is better)
Translates to: EGGSMKLSGVAS*PAAGEKLATIA
Trigger: TGCAATGGTAGCCAGCTTTTCTCCGGCAGCTGGTCAGCTAGCCACACCTGAGAGCTTCATAGAGCCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CAA 72 bp TTCGTCACGTTCAATGGGGCCCTGAAGGGGCTCTGGTaGGCAATCAGACTGGCATGGCTTAGCTCAGGGACT +
Preference number: 6 (lower is better)
Translates to: FVTFNGALKGLW*AIRLAWLSSGT
Trigger: AGTCCCTGAGCTAAGCCATGCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CAA 90 bp GTAACCAGTGGGGCGCCTGCAACCTGGAGAGTGACAATGGTCATTTaGTACCGAAGTGCAGAAGCCAGTAGCCAGGCCCAGAATAGGGAC +
Preference number: 6 (lower is better)
Translates to: VTSGAPATWRVTMVI*YRSAEASSQAQNRD
Trigger: GTCCCTATTCTGGGCCTGGCTACTGGCTTCTGCACTTCGGTACAAAATGACCATTGTCACTCTCCAGGTTGCAGGCGCCCCACTGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558034.1
CDS GCA 72 bp CAGATGGAGCAGACCTCTCATACTCATCCTTGGCTCTaGTCAGCATCTCCAGGATGTCGATGGGCCTGTGGT +
Preference number: 6 (lower is better)
Translates to: QMEQTSHTHPWL*SASPGCRWACG
Trigger: ACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGAGGTCTGCTCCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294241.10
CDS GCA 72 bp CACTGCAGTGGTCGTTGCAGTAACCAGTGGGGCGCCTaGAACCTGGAGAGTGACAATGGTCATTTTGTACCG +
Preference number: 6 (lower is better)
Translates to: HCSGRCSNQWGA*NLESDNGHFVP
Trigger: CGGTACAAAATGACCATTGTCACTCTCCAGGTTGCAGGCGCCCCACTGGTTACTGCAACGACCACTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558034.1
CDS CCA 72 bp TGTGTCCAGATGGAGCAGACCTCTCATACTCATCCTTaGCTCTGCTCAGCATCTCCAGGATGTCGATGGGCC +
Preference number: 6 (lower is better)
Translates to: CVQMEQTSHTHP*LCSASPGCRWA
Trigger: GGCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGAGGTCTGCTCCATCTGGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294241.10
CDS CCA 72 bp ATTAGCACCGGGGTGGTGATTTCAGGCTGGACTGAATaGTGGGCAGCAGAAGGGACACCCAGGGTTTCTGAT +
Preference number: 6 (lower is better)
Translates to: ISTGVVISGWTE*WAAEGTPRVSD
Trigger: ATCAGAAACCCTGGGTGTCCCTTCTGCTGCCCACCATTCAGTCCAGCCTGAAATCACCACCCCGGTGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 72 bp CAGGTGTGGCTAGCTGACCAGCTGCCGGAGAAAAGCTaGCTACCATTGCACCTTTCCCAAGTGGTTGTGTCT +
Preference number: 6 (lower is better)
Translates to: QVWLADQLPEKS*LPLHLSQVVVS
Trigger: AGACACAACCACTTGGGAAAGGTGCAATGGTAGCCAGCTTTTCTCCGGCAGCTGGTCAGCTAGCCACACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS TCA 72 bp AACTGTCTGCTGGAAAACACTTGGGGCCAGCAGGACTaGAGACACTGCAGTGGTCGTTGCAGTAACCAGTGG +
Preference number: 6 (lower is better)
Translates to: NCLLENTWGQQD*RHCSGRCSNQW
Trigger: CCACTGGTTACTGCAACGACCACTGCAGTGTCTTCAGTCCTGCTGGCCCCAAGTGTTTTCCAGCAGACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294241.10
ENST00000558034.1
ENST00000610213.6
CDS CAA 72 bp TTGTGTCCAGATGGAGCAGACCTCTCATACTCATCCTaGGCTCTGCTCAGCATCTCCAGGATGTCGATGGGC +
Preference number: 6 (lower is better)
Translates to: LCPDGADLSYSS*ALLSISRMSMG
Trigger: GCCCATCGACATCCTGGAGATGCTGAGCAGAGCCAAGGATGAGTATGAGAGGTCTGCTCCATCTGGACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294241.10
CDS CAA 72 bp GAGTCTCGGTGCTTCCCAGATTGGAGAGCTGAGTGCTaGGCTGTAACCCAGGGCTGGAGATATTTGAGTCAC +
Preference number: 6 (lower is better)
Translates to: ESRCFPDWRAEC*AVTQGWRYLSH
Trigger: GTGACTCAAATATCTCCAGCCCTGGGTTACAGCCAAGCACTCAGCTCTCCAATCTGGGAAGCACCGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560624.5
ENST00000610213.6
CDS CAA 90 bp CAGGTGTGGCTAGCTGACCAGCTGCCGGAGAAAAGCTGGCTACCATaGCACCTTTCCCAAGTGGTTGTGTCTGTATTTGGTCATGCTGTG +
Preference number: 6 (lower is better)
Translates to: QVWLADQLPEKSWLP*HLSQVVVSVFGHAV
Trigger: CACAGCATGACCAAATACAGACACAACCACTTGGGAAAGGTGCAATGGTAGCCAGCTTTTCTCCGGCAGCTGGTCAGCTAGCCACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 72 bp GGGACTGAGAACAGGGCTCAACGGGATTGTGTAGGTTaGAGCATGCTTTTCATTGGACTGTGTGATGGAGGC +
Preference number: 6 (lower is better)
Translates to: GTENRAQRDCVG*SMLFIGLCDGG
Trigger: GCCTCCATCACACAGTCCAATGAAAAGCATGCTCCAACCTACACAATCCCGTTGAGCCCTGTTCTCAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 72 bp TGGGGTCAACCTGAGTTTCTGGAGAAGATCAACGCTTaGGAGGGATGTGCCAGCTGTGTTCGTCACGTTCAA +
Preference number: 6 (lower is better)
Translates to: WGQPEFLEKINA*EGCASCVRHVQ
Trigger: TTGAACGTGACGAACACAGCTGGCACATCCCTCCCAAGCGTTGATCTTCTCCAGAAACTCAGGTTGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS GCA 72 bp CCTGCAACCGGGATGGCACTGGATAACACCTTAGGCTaGACAAATACTTCAGGATCCTGGTTCTGCTGCATA +
Preference number: 6 (lower is better)
Translates to: PATGMALDNTLG*TNTSGSWFCCI
Trigger: TATGCAGCAGAACCAGGATCCTGAAGTATTTGTGCAGCCTAAGGTGTTATCCAGTGCCATCCCGGTTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CAA 90 bp TTTCTTCTAGAGTCTCGGTGCTTCCCAGATTGGAGAGCTGAGTGCTaGGCTGTAACCCAGGGCTGGAGATATTTGAGTCACCCATCTGAT +
Preference number: 6 (lower is better)
Translates to: FLLESRCFPDWRAEC*AVTQGWRYLSHPSD
Trigger: ATCAGATGGGTGACTCAAATATCTCCAGCCCTGGGTTACAGCCAAGCACTCAGCTCTCCAATCTGGGAAGCACCGAGACTCTAGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560624.5
ENST00000610213.6
CDS TCA 72 bp GTTGTGTCTGTATTTGGTCATGCTGTGGGGTCAACCTaGGTTTCTGGAGAAGATCAACGCTTGGGAGGGATG +
Preference number: 6 (lower is better)
Translates to: VVSVFGHAVGST*VSGEDQRLGGM
Trigger: CATCCCTCCCAAGCGTTGATCTTCTCCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAGACACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS CCA 72 bp CTCCTAACTGCTCAAAGGGAAATGGTAGGAATGAATTaGGCTCTTTCTGGGAGGCATCTCCTGGCAACCTCT +
Preference number: 6 (lower is better)
Translates to: LLTAQREMVGMN*ALSGRHLLATS
Trigger: AGAGGTTGCCAGGAGATGCCTCCCAGAAAGAGCCCAATTCATTCCTACCATTTCCCTTTGAGCAGTTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294241.10
ENST00000560624.5
ENST00000610213.6
CDS CCA 72 bp TTCCTCTCAAGGTCCGAAGATCTTGTAACTGTCTGCTaGAAAACACTTGGGGCCAGCAGGACTGAAGACACT +
Preference number: 6 (lower is better)
Translates to: FLSRSEDLVTVC*KTLGASRTEDT
Trigger: AGTGTCTTCAGTCCTGCTGGCCCCAAGTGTTTTCCAGCAGACAGTTACAAGATCTTCGGACCTTGAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294241.10
ENST00000558034.1
ENST00000610213.6
CDS CCA 72 bp GATTGGAGAGCTGAGTGCTTGGCTGTAACCCAGGGCTaGAGATATTTGAGTCACCCATCTGATTCCTCTCAT +
Preference number: 6 (lower is better)
Translates to: DWRAECLAVTQG*RYLSHPSDSSH
Trigger: ATGAGAGGAATCAGATGGGTGACTCAAATATCTCCAGCCCTGGGTTACAGCCAAGCACTCAGCTCTCCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559748.5
ENST00000560624.5
ENST00000610213.6
CDS CAA 90 bp AAAGCTGGCTACCATTGCACCTTTCCCAAGTGGTTGTGTCTGTATTaGGTCATGCTGTGGGGTCAACCTGAGTTTCTGGAGAAGATCAAC +
Preference number: 6 (lower is better)
Translates to: KAGYHCTFPKWLCLY*VMLWGQPEFLEKIN
Trigger: GTTGATCTTCTCCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAGACACAACCACTTGGGAAAGGTGCAATGGTAGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294241.10
ENST00000610213.6
CDS GCA 72 bp GGCAAAGAGGTTCCAAATAACTCTTCTACCGTCAGATaGTTGTGTCCAGATGGAGCAGACCTCTCATACTCA +
Preference number: 6 (lower is better)
Translates to: GKEVPNNSSTVR*LCPDGADLSYS
Trigger: TGAGTATGAGAGGTCTGCTCCATCTGGACACAAGCATCTGACGGTAGAAGAGTTATTTGGAACCTCTTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294241.10
CDS GCA 72 bp GGCAAAGAGGTTCCAAATAACTCTTCTACCGTCAGATaGTTGTGTCCAGATGGAGCAGACTTATCCTGTGAC +
Preference number: 6 (lower is better)
Translates to: GKEVPNNSSTVR*LCPDGADLSCD
Trigger: GTCACAGGATAAGTCTGCTCCATCTGGACACAAGCATCTGACGGTAGAAGAGTTATTTGGAACCTCTTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560624.5
ENST00000610213.6
CDS CAA 72 bp AAAGAGGTTCCAAATAACTCTTCTACCGTCAGATGCTaGTGTCCAGATGGAGCAGACTTATCCTGTGACCCG +
Preference number: 6 (lower is better)
Translates to: KEVPNNSSTVRC*CPDGADLSCDP
Trigger: CGGGTCACAGGATAAGTCTGCTCCATCTGGACACAAGCATCTGACGGTAGAAGAGTTATTTGGAACCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560624.5
ENST00000610213.6
CDS CAA 72 bp AAAGAGGTTCCAAATAACTCTTCTACCGTCAGATGCTaGTGTCCAGATGGAGCAGACCTCTCATACTCATCC +
Preference number: 6 (lower is better)
Translates to: KEVPNNSSTVRC*CPDGADLSYSS
Trigger: GGATGAGTATGAGAGGTCTGCTCCATCTGGACACAAGCATCTGACGGTAGAAGAGTTATTTGGAACCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294241.10
CDS CAA 72 bp CTTCTGAATCCAGACCCACAACTGCTGGTTGTTCCTTaGGCAAAGAGGTTCCAAATAACTCTTCTACCGTCA +
Preference number: 6 (lower is better)
Translates to: LLNPDPQLLVVP*AKRFQITLLPS
Trigger: TGACGGTAGAAGAGTTATTTGGAACCTCTTTGCCAAAGGAACAACCAGCAGTTGTGGGTCTGGATTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294241.10
ENST00000560624.5
ENST00000610213.6
CDS CAA 72 bp GCTCTGCCTTTAGACTTATTCTGCTCCAGTCATAGGTaGTGGTTGTCTTTGTTCTTGGTCAGAACCTGCAAG +
Preference number: 6 (lower is better)
Translates to: ALPLDLFCSSHR*WLSLFLVRTCK
Trigger: CTTGCAGGTTCTGACCAAGAACAAAGACAACCACAACCTATGACTGGAGCAGAATAAGTCTAAAGGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294241.10
ENST00000558034.1
ENST00000610213.6
CDS CAA 90 bp TCTCCATTTCTTCTGAATCCAGACCCACAACTGCTGGTTGTTCCTTaGGCAAAGAGGTTCCAAATAACTCTTCTACCGTCAGATGCTTGT +
Preference number: 6 (lower is better)
Translates to: SPFLLNPDPQLLVVP*AKRFQITLLPSDAC
Trigger: ACAAGCATCTGACGGTAGAAGAGTTATTTGGAACCTCTTTGCCAAAGGAACAACCAGCAGTTGTGGGTCTGGATTCAGAAGAAATGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294241.10
ENST00000560624.5
ENST00000610213.6