RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCN (Homo sapiens)

Ensembl gene IDs: ENSG00000011465

Ensembl transcript IDs: ENST00000052754.10, ENST00000393155.6, ENST00000420120.6, ENST00000425043.5, ENST00000441303.6, ENST00000456569.2, ENST00000546370.5, ENST00000546391.5, ENST00000546745.5, ENST00000547568.6, ENST00000547937.5, ENST00000548218.1, ENST00000548768.1, ENST00000549513.5, ENST00000550099.5, ENST00000550563.5, ENST00000550758.1, ENST00000551354.1, ENST00000552145.5, ENST00000552962.5

Found 491 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCGAGTTGAATGGCAGAGCGCACGTAGACACATCTGAAGGTGGATaGCTGTATCTCCCAGTACTGGACCGGGTTGCTGAAAAGACTCAC +
Preference number: 1 (lower is better)
Translates to: SELNGRAHVDTSEGG*LYLPVLDRVAEKTH
Trigger: GTGAGTCTTTTCAGCAACCCGGTCCAGTACTGGGAGATACAGCCATCCACCTTCAGATGTGTCTACGTGCGCTCTGCCATTCAACTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR GCA 90 bp ATGTCTCCTCCTGCTGCAACATCTGCTTCAGAGGGCAAGGCATTATaGACTGCTGTGTCTCTGCCACTAGAACACTGTCAAGCACACAGT +
Preference number: 1 (lower is better)
Translates to: MSPPAATSASEGKAL*TAVSLPLEHCQAHS
Trigger: ACTGTGTGCTTGACAGTGTTCTAGTGGCAGAGACACAGCAGTGCATAATGCCTTGCCCTCTGAAGCAGATGTTGCAGCAGGAGGAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CCA 90 bp GCGGGCGAACTTAGAGGATGGGTCAGTAGGGCCAGCAAACCACCATaGCACACGTATACCTATATAACAAACCTGCACATTCTGCAAACG +
Preference number: 1 (lower is better)
Translates to: AGELRGWVSRASKPP*HTYTYITNLHILQT
Trigger: CGTTTGCAGAATGTGCAGGTTTGTTATATAGGTATACGTGTGCCATGGTGGTTTGCTGGCCCTACTGACCCATCCTCTAAGTTCGCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
3UTR CCA 90 bp CCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTaGATTTTGAACTTAGTCCCTGTCTTGAATAGTGCCTCCCCACCA +
Preference number: 1 (lower is better)
Translates to: PPLCQPVRGVSQHTS*ILNLVPVLNSASPP
Trigger: TGGTGGGGAGGCACTATTCAAGACAGGGACTAAGTTCAAAATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR GCA 90 bp ACTTTAATTGTCATGTCCTGGAATGTCTCCTCCTGCTGCAACATCTaGTTCAGAGGGCAAGGCATTATGCACTGCTGTGTCTCTGCCACT +
Preference number: 1 (lower is better)
Translates to: TLIVMSWNVSSCCNI*FRGQGIMHCCVSAT
Trigger: AGTGGCAGAGACACAGCAGTGCATAATGCCTTGCCCTCTGAAGCAGATGTTGCAGCAGGAGGAGACATTCCAGGACATGACAATTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR GCA 90 bp CATTCCTCCACTTTAATTGTCATGTCCTGGAATGTCTCCTCCTGCTaGAACATCTGCTTCAGAGGGCAAGGCATTATGCACTGCTGTGTC +
Preference number: 1 (lower is better)
Translates to: HSSTLIVMSWNVSSC*NICFRGQGIMHCCV
Trigger: GACACAGCAGTGCATAATGCCTTGCCCTCTGAAGCAGATGTTGCAGCAGGAGGAGACATTCCAGGACATGACAATTAAAGTGGAGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 90 bp GTAGGAGAGCTTCTTCATTCCCTGGAAAGCCCCATTTTCAATTCCTaGGCTCTTCAGCGGATTGGTGCCCAGTTCTATGACAATCATCTG +
Preference number: 1 (lower is better)
Translates to: VGELLHSLESPIFNS*ALQRIGAQFYDNHL
Trigger: CAGATGATTGTCATAGAACTGGGCACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGGGCTTTCCAGGGAATGAAGAAGCTCTCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR GCA 90 bp CACTTTACTCTGCTCACGTTTGTCCTCTCTGCTCTTGTTGGAACGTaGCATGTATTTTCCAAATTCAGGGCCTCTTTTCTTGGCTTGCTC +
Preference number: 1 (lower is better)
Translates to: HFTLLTFVLSALVGT*HVFSKFRASFLGLL
Trigger: GAGCAAGCCAAGAAAAGAGGCCCTGAATTTGGAAAATACATGGCACGTTCCAACAAGAGCAGAGAGGACAAACGTGAGCAGAGTAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 90 bp TGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCTTCTaGATGACTGAACAAATAGATCCATTGGAATTATCCTGCGGCCTT +
Preference number: 1 (lower is better)
Translates to: CLEQSSSMMGSRYSF*MTEQIDPLELSCGL
Trigger: AAGGCCGCAGGATAATTCCAATGGATCTATTTGTTCAGTCATTCAGAAGCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR GCA 90 bp ATTATCTCTTCTTGCTCACTTTACTCTGCTCACGTTTGTCCTCTCTaGTCTTGTTGGAACGTGCCATGTATTTTCCAAATTCAGGGCCTC +
Preference number: 1 (lower is better)
Translates to: IISSCSLYSAHVCPL*SCWNVPCIFQIQGL
Trigger: GAGGCCCTGAATTTGGAAAATACATGGCACGTTCCAACAAGAGCAGAGAGGACAAACGTGAGCAGAGTAAAGTGAGCAAGAAGAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR GCA 90 bp TCTACTTATTTCTCACCACACTTGTCAGTTAAGCAGCAGGATATCTaGAGGCTTTTCCCCATAAGAGAAAGGCTGCAGCATAAAGGGTAT +
Preference number: 1 (lower is better)
Translates to: STYFSPHLSVKQQDI*RLFPIRERLQHKGY
Trigger: ATACCCTTTATGCTGCAGCCTTTCTCTTATGGGGAAAAGCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAGAAATAAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CCA 90 bp CATCTCTCACCTGATTATTGCACTAGCATCCGAAATATTCTCTCTTaGCCTATTCCTGTTACCTTACAGTCTATACACGCAAAGGGATCC +
Preference number: 1 (lower is better)
Translates to: HLSPDYCTSIRNILS*PIPVTLQSIHAKGS
Trigger: GGATCCCTTTGCGTGTATAGACTGTAAGGTAACAGGAATAGGCCAAGAGAGAATATTTCGGATGCTAGTGCAATAATCAGGTGAGAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 90 bp ATAAGAAGCCTTTTTGGTGTTGTGTCCAGGTGGGCAGAAGTCACTTaGTCCAACTACAGAGATATTGTTGTTATGAAGGTAGACAACCTG +
Preference number: 1 (lower is better)
Translates to: IRSLFGVVSRWAEVT*SNYRDIVVMKVDNL
Trigger: CAGGTTGTCTACCTTCATAACAACAATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCACCTGGACACAACACCAAAAAGGCTTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR TCA 90 bp GAACAGAAAACCAAATACTGCATGTTCTCACGCATAAATGGAAGTTaGATGCTGAGAACACACGGACACAGAGAGGGTAACAAAACACAC +
Preference number: 1 (lower is better)
Translates to: EQKTKYCMFSRINGS*MLRTHGHREGNKTH
Trigger: GTGTGTTTTGTTACCCTCTCTGTGTCCGTGTGTTCTCAGCATTCAACTTCCATTTATGCGTGAGAACATGCAGTATTTGGTTTTCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550758.1
3UTR GCA 90 bp GTCTTGAATAGTGCCTCCCCACCAAATCTTGCTCTTGAACTATTATaGATCTATGGAAACCCACCTCAACTGTTATCTCCTCAAGTTTTT +
Preference number: 1 (lower is better)
Translates to: VLNSASPPNLALELL*IYGNPPQLLSPQVF
Trigger: AAAAACTTGAGGAGATAACAGTTGAGGTGGGTTTCCATAGATGCATAATAGTTCAAGAGCAAGATTTGGTGGGGAGGCACTATTCAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR GCA 90 bp GATTGTCATTACCTTTCTGACCTTGTATCATATATTATCTCTTCTTaGTCACTTTACTCTGCTCACGTTTGTCCTCTCTGCTCTTGTTGG +
Preference number: 1 (lower is better)
Translates to: DCHYLSDLVSYIISS*SLYSAHVCPLCSCW
Trigger: CCAACAAGAGCAGAGAGGACAAACGTGAGCAGAGTAAAGTGAGCAAGAAGAGATAATATATGATACAAGGTCAGAAAGGTAATGACAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 90 bp ATTCAAGGTTACAATAAGAAGGGTGAATCGTTAAAGGCTATAGCATaGAGGGTGCATTATTCATGGTTACAACAGAGAGAAGGATGCATC +
Preference number: 1 (lower is better)
Translates to: IQGYNKKGESLKAIA*RVHYSWLQQREGCI
Trigger: GATGCATCCTTCTCTCTGTTGTAACCATGAATAATGCACCCTTCATGCTATAGCCTTTAACGATTCACCCTTCTTATTGTAACCTTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 90 bp CAATGGCCTAAAAAGTCCTACAGGATGCGATTGTCATTACCTTTCTaGCCTTGTATCATATATTATCTCTTCTTGCTCACTTTACTCTGC +
Preference number: 1 (lower is better)
Translates to: QWPKKSYRMRLSLPF*PCIIYYLFLLTLLC
Trigger: GCAGAGTAAAGTGAGCAAGAAGAGATAATATATGATACAAGGTCAGAAAGGTAATGACAATCGCATCCTGTAGGACTTTTTAGGCCATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 90 bp GGCAATCTGACTGCGTTATCAGTTAGACCAGGCTTCATACATAGATaGTTCTTCTCTTTAATTCTATTCTCTTTCCAGTCAAACTCAAGG +
Preference number: 1 (lower is better)
Translates to: GNLTALSVRPGFIHR*FFSLILFSFQSNSR
Trigger: CCTTGAGTTTGACTGGAAAGAGAATAGAATTAAAGAGAAGAATCATCTATGTATGAAGCCTGGTCTAACTGATAACGCAGTCAGATTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546745.5
3UTR TCA 90 bp GAAGTTGCATTTTTCTTCTGCAAACTACTGCTAGAAAGCATGTTCTaGGTAAATATAGGACTTCTGAAAGAAGTGCCTGATCATAGTATG +
Preference number: 1 (lower is better)
Translates to: EVAFFFCKLLLESMF*VNIGLLKEVPDHSM
Trigger: CATACTATGATCAGGCACTTCTTTCAGAAGTCCTATATTTACTCAGAACATGCTTTCTAGCAGTAGTTTGCAGAAGAAAAATGCAACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR TCA 90 bp GTTACCATACTCAAATGTAAGATAGGGAGAGGTAGAAGAAATAGCTaGGAACTTGAAAAGATGTACTGTTATTGTCAACAAACCAATGTC +
Preference number: 1 (lower is better)
Translates to: VTILKCKIGRGRRNS*ELEKMYCYCQQTNV
Trigger: GACATTGGTTTGTTGACAATAACAGTACATCTTTTCAAGTTCTCAGCTATTTCTTCTACCTCTCCCTATCTTACATTTGAGTATGGTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
3UTR-3UTR CCA 90 bp CAACAGGGGGTAGGGGGTGAGCGGGCGAACTTAGAGGATGGGTCAGTAGGGCCATCCCCCTACTCACTATaGCACCAACATCACCACCCC +
Preference number: 2 (lower is better)
Translates to: QQGVGGERANLEDGSVGPSPYSL*HQHHHP
Trigger: GGGGTGGTGATGTTGGTGCCATAGTGAGTAGGGGGA...TGGCCCTACTGACCCATCCTCTAAGTTCGCCCGCTCACCCCCTACCCCCTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000550758.1
3UTR-3UTR TCA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGTTGAAGGCTACAACATaGAGGGTGCGTCACTCAAGG +
Preference number: 2 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKLKATT*RVRHSR
Trigger: CCTTGAGTGACGCACCCTTCATGTTGTAGCCTTCAA...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR TCA 90 bp TGGAAAGCCCCATTTTCAATTCCTGAGCTCTTCAGCGGATTGGTGCCCAGTTCTCTTTTCGCACTTTGGTaGTCTCATTCTCATGGGCAC +
Preference number: 2 (lower is better)
Translates to: WKAPFSIPELFSGLVPSSLFALW*SHSHGH
Trigger: GTGCCCATGAGAATGAGATCACCAAAGTGCGAAAAG...AGAACTGGGCACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGGGCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR-3UTR CCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTGTGAAGGGGCAGTCTTaGACTGGGACTGCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSVKGQS*TGTAWN
Trigger: GTTCCAGGCAGTCCCAGTCCAAGACTGCCCCTTCAC...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 90 bp TTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTTaGAACTTAGTCCCTGTCTTGAATAGTGCCTCCCCACCAAATCTT +
Preference number: 2 (lower is better)
Translates to: LCQPVRGVSQHTSWI*NLVPVLNSASPPNL
Trigger: AAGATTTGGTGGGGAGGCACTATTCAAGACAGGGACTAAGTTCAAAATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR TCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCCTAGAAAGCATGTTCTaGGTAAATATAGGACTTCTG +
Preference number: 2 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSLESMF*VNIGLL
Trigger: CAGAAGTCCTATATTTACTCAGAACATGCTTTCTAG...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR CAA 90 bp GGTGTGTCCCAGCATACGTCTTGGATTTTGAACTTAGTCCCTGTCTaGAATAGTGCCTCCCCACCAAATCTTGCTCTTGAACTATTATGC +
Preference number: 2 (lower is better)
Translates to: GVSQHTSWILNLVPV*NSASPPNLALELLC
Trigger: GCATAATAGTTCAAGAGCAAGATTTGGTGGGGAGGCACTATTCAAGACAGGGACTAAGTTCAAAATCCAAGACGTATGCTGGGACACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 90 bp TCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGTTTGTTaGAAATGCAGAATCTCAGACCTCGATCCAGAACTGACACATAAG +
Preference number: 2 (lower is better)
Translates to: SPSVDQEAAAFLEVC*KCRISDLDPELTHK
Trigger: CTTATGTGTCAGTTCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 90 bp CTCTTCTTGCTCACTTTACTCTGCTCACGTTTGTCCTCTCTGCTCTaGTTGGAACGTGCCATGTATTTTCCAAATTCAGGGCCTCTTTTC +
Preference number: 2 (lower is better)
Translates to: LFLLTLLCSRLSSLL*LERAMYFPNSGPLF
Trigger: GAAAAGAGGCCCTGAATTTGGAAAATACATGGCACGTTCCAACAAGAGCAGAGAGGACAAACGTGAGCAGAGTAAAGTGAGCAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR TCA 90 bp GCTGCATCAACTCTGCTGATTTTGTTGCCATCAAGATGTAATTCCGTAAGGGAATGGGCACGCAGCTCCTaGAGAGTTTTGGGCATTTTT +
Preference number: 2 (lower is better)
Translates to: AASTLLILLPSRCNSVREWARSS*RVLGIF
Trigger: AAAAATGCCCAAAACTCTTCAGGAGCTGCGTGCCCA...TTCCCTTACGGAATTACATCTTGATGGCAACAAAATCAGCAGAGTTGATGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR-3UTR GCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTCTACAACATGAAGGGTaGGTCACTCAAGGCTACACC +
Preference number: 2 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSLQHEG*VTQGYT
Trigger: GGTGTAGCCTTGAGTGACGCACCCTTCATGTTGTAG...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 90 bp TTCTTGCTCACTTTACTCTGCTCACGTTTGTCCTCTCTGCTCTTGTaGGAACGTGCCATGTATTTTCCAAATTCAGGGCCTCTTTTCTTG +
Preference number: 2 (lower is better)
Translates to: FLLTLLCSRLSSLLL*ERAMYFPNSGPLFL
Trigger: CAAGAAAAGAGGCCCTGAATTTGGAAAATACATGGCACGTTCCAACAAGAGCAGAGAGGACAAACGTGAGCAGAGTAAAGTGAGCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR TCA 90 bp TTCCTGGAAGTTTGTTTGAAATGCAGAATCTCAGACCTCGATCCAGAACTGACATGGAGTGTGCATCATTaGAGGCTACAACATGAAGGG +
Preference number: 2 (lower is better)
Translates to: FLEVCLKCRISDLDPELTWSVHH*RLQHEG
Trigger: CCCTTCATGTTGTAGCCTTCAATGATGCACACTCCA...TGTCAGTTCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR GCA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGGCTCTTGAACTATTATaGATCTATGGAAACCCACCT +
Preference number: 2 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKALELL*IYGNPP
Trigger: AGGTGGGTTTCCATAGATGCATAATAGTTCAAGAGC...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR GCA 90 bp ACCGAGACCCCTCTAATAGCTCTCTGTCTTACTCAGAGTAAAAGCTCATCTTTAGTCTTGGACTGGGACTaGCTGGAACATTGGATGAAT +
Preference number: 2 (lower is better)
Translates to: TETPLIALCLTQSKSSSLVLDWD*LEHWMN
Trigger: ATTCATCCAATGTTCCAGGCAGTCCCAGTCCAAGAC...TAAAGATGAGCTTTTACTCTGAGTAAGACAGAGAGCTATTAGAGGGGTCTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR TCA 90 bp TTTCTGCAGATGGAGATGTCAAGGCTCTCAACAGCTTGCCAGCATCATAAAGTATCAAAAGGAGGAATGTaGATGAGCTGCCATGTAAAC +
Preference number: 2 (lower is better)
Translates to: FLQMEMSRLSTACQHHKVSKGGM*MSCHVN
Trigger: GTTTACATGGCAGCTCATTCACATTCCTCCTTTTGA...TACTTTATGATGCTGGCAAGCTGTTGAGAGCCTTGACATCTCCATCTGCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR-3UTR GCA 90 bp TTTCTACTTATTTCTCACCACACTTGTCAGTTAAGCAGCAGGATATCTGCAGGCATTAAGCCTCCTTTATaGCAACCTGTCAGAGGTGTG +
Preference number: 2 (lower is better)
Translates to: FLLISHHTCQLSSRISAGIKPPL*QPVRGV
Trigger: CACACCTCTGACAGGTTGGCATAAAGGAGGCTTAAT...GCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAGAAATAAGTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR GCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTGGTAGGGTGTGCATATaGCCTTTCTTTTGGCTCAAA +
Preference number: 2 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSGRVCI*PFFWLK
Trigger: TTTGAGCCAAAAGAAAGGGCATATGCACACCCTACC...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR GCA 90 bp AAAATACCTTGCATGAGACCACTGCTCATTGGAACTTACTTAGTTCCCTTAGTTGGAAAACTGGCCCAGTaGTTTCATCAGGGTCAAGGT +
Preference number: 2 (lower is better)
Translates to: KIPCMRPLLIGTYLVPLVGKLAQ*FHQGQG
Trigger: ACCTTGACCCTGATGAAAGCACTGGGCCAGTTTTCC...AACTAAGGGAACTAAGTAAGTTCCAATGAGCAGTGGTCTCATGCAAGGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR-3UTR CCA 90 bp TTTCTGCAGATGGAGATGTCAAGGCTCTCAACAGCTTGCCAGCATCATAAAGTAGAGACCACTGCTCATTaGAACTTACTTAGTTCCCTT +
Preference number: 2 (lower is better)
Translates to: FLQMEMSRLSTACQHHKVETTAH*NLLSSL
Trigger: AAGGGAACTAAGTAAGTTCCAATGAGCAGTGGTCTC...TACTTTATGATGCTGGCAAGCTGTTGAGAGCCTTGACATCTCCATCTGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR-3UTR GCA 90 bp TTCCTGGAAGTTTGTTTGAAATGCAGAATCTCAGACCTCGATCCAGAACTGACAAAAGTGTGTTGGATCTaGCTTGCAGATAAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: FLEVCLKCRISDLDPELTKVCWI*LADKCP
Trigger: TGGACACTTATCTGCAAGGCAGATCCAACACACTTT...TGTCAGTTCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR CCA 90 bp GCAGCCATAAAAAGGAATGGGATCATGTCCTTTACAAGGACATGGATGAAACTAGCCAGCAAACCACCATaGCACACGTATACCTATATA +
Preference number: 2 (lower is better)
Translates to: AAIKRNGIMSFTRTWMKLASKPP*HTYTYI
Trigger: TATATAGGTATACGTGTGCCATGGTGGTTTGCTGGC...TAGTTTCATCCATGTCCTTGTAAAGGACATGATCCCATTCCTTTTTATGGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550758.1
3UTR CAA 90 bp AATAAGAAGCCTTTTTGGTGTTGTGTCCAGGTGGGCAGAAGTCACTaGATCCAACTACAGAGATATTGTTGTTATGAAGGTAGACAACCT +
Preference number: 2 (lower is better)
Translates to: NKKPFWCCVQVGRSH*IQLQRYCCYEGRQP
Trigger: AGGTTGTCTACCTTCATAACAACAATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCACCTGGACACAACACCAAAAAGGCTTCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCTGGTGCCCAGTTCTATaGCAATCATCTGGTTCAGTC +
Preference number: 2 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFWCPVL*QSSGSV
Trigger: GACTGAACCAGATGATTGTCATAGAACTGGGCACCA...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR-3UTR TCA 90 bp ATGCACATCAATGATAGACTGGATAAAGGAAATGTGGTACATATACACCGTGGACGCATAAATGGAAGTTaGATGCTGAGAACACACGGA +
Preference number: 2 (lower is better)
Translates to: MHINDRLDKGNVVHIHRGRINGS*MLRTHG
Trigger: TCCGTGTGTTCTCAGCATTCAACTTCCATTTATGCG...TCCACGGTGTATATGTACCACATTTCCTTTATCCAGTCTATCATTGATGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
3UTR-3UTR CCA 90 bp TTTCTGCAGATGGAGATGTCAAGGCTCTCAACAGCTTGCCAGCATCATAAAGTAATCCAATCTCCCCTGTaGCAAATACACAATTCAAAA +
Preference number: 2 (lower is better)
Translates to: FLQMEMSRLSTACQHHKVIQSPL*QIHNSK
Trigger: TTTTGAATTGTGTATTTGCCACAGGGGAGATTGGAT...TACTTTATGATGCTGGCAAGCTGTTGAGAGCCTTGACATCTCCATCTGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR-3UTR CCA 90 bp AAAATACCTTGCATGAGACCACTGCTCATTGGAACTTACTTAGTTCCCTTAGTTAGAGAATTGGAAAACTaGCCCAGTGCTTTCATCAGG +
Preference number: 2 (lower is better)
Translates to: KIPCMRPLLIGTYLVPLVRELEN*PSAFIR
Trigger: CCTGATGAAAGCACTGGGCCAGTTTTCCAATTCTCT...AACTAAGGGAACTAAGTAAGTTCCAATGAGCAGTGGTCTCATGCAAGGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR CAA 90 bp TTTCCAGTCAAACTCAAGGAATTTCTAAGCTTCCTGGTTTTACAGTaGTCCTTAAAGGGAAGGAGCAAGGATGCACTGAGAAATCACTTT +
Preference number: 2 (lower is better)
Translates to: FPVKLKEFLSFLVLQ*SLKGRSKDALRNHF
Trigger: AAAGTGATTTCTCAGTGCATCCTTGCTCCTTCCCTTTAAGGACAACTGTAAAACCAGGAAGCTTAGAAATTCCTTGAGTTTGACTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
3UTR-3UTR TCA 90 bp GTCATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGATTCCCCAGTTCTGCTTaGCATTCCTCCACTTTAATT +
Preference number: 2 (lower is better)
Translates to: VISVLIKKDHNLYSGISRFPSSA*HSSTLI
Trigger: AATTAAAGTGGAGGAATGTCAAGCAGAACTGGGGAA...TCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR GCA 90 bp GGTTTTACAGTTGTCCTTAAAGGGAAGGAGCAAGGATGCACTGAGAAATCACTTTCAAGAACCAAGCCATaGATATGTTCGTGTATTCAT +
Preference number: 2 (lower is better)
Translates to: GFTVVLKGKEQGCTEKSLSRTKP*ICSCIH
Trigger: ATGAATACACGAACATATGCATGGCTTGGTTCTTGA...AAGTGATTTCTCAGTGCATCCTTGCTCCTTCCCTTTAAGGACAACTGTAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
3UTR-3UTR CCA 90 bp TCCAAAATGGTCTTCCCCTCTTTAGATTTCTACTTATTTCTCACCACACTTGTCTCCCAGCATACGTCTTaGATTTTGAACTTAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SKMVFPSLDFYLFLTTLVSQHTS*ILNLVP
Trigger: AGGGACTAAGTTCAAAATCCAAGACGTATGCTGGGA...GACAAGTGTGGTGAGAAATAAGTAGAAATCTAAAGAGGGGAAGACCATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 90 bp AGTTGTGTTGACAAGAGTGCTGGAGAATCAGGCCTGTTTCTCATTTaGATACTGAACAAAATTAGAAGTAGCTTGACTACTGGAAAAGTG +
Preference number: 2 (lower is better)
Translates to: SCVDKSAGESGLFLI*ILNKIRSSLTTGKV
Trigger: CACTTTTCCAGTAGTCAAGCTACTTCTAATTTTGTTCAGTATCAAAATGAGAAACAGGCCTGATTCTCCAGCACTCTTGTCAACACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 90 bp TGTATCATATATTATCTCTTCTTGCTCACTTTACTCTGCTCACGTTaGTCCTCTCTGCTCTTGTTGGAACGTGCCATGTATTTTCCAAAT +
Preference number: 2 (lower is better)
Translates to: CIIYYLFLLTLLCSR*SSLLLLERAMYFPN
Trigger: ATTTGGAAAATACATGGCACGTTCCAACAAGAGCAGAGAGGACAAACGTGAGCAGAGTAAAGTGAGCAAGAAGAGATAATATATGATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR TCA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGCTTGAGGAATGCTGGTaGTATTGGTATCAGCAATGC +
Preference number: 2 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGLEECW*YWYQQC
Trigger: GCATTGCTGATACCAATATCACCAGCATTCCTCAAG...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR-3UTR GCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTTTTTTCATGTTCCACTaGACTCATTCTGCTACTATT +
Preference number: 2 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSFFMFH*THSATI
Trigger: AATAGTAGCAGAATGAGTGCAGTGGAACATGAAAAA...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR GCA 90 bp ATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTACATCCTTTCAGGCTAGCTaGATCAACTCTGCTGATTTT +
Preference number: 2 (lower is better)
Translates to: ISSLDQSGNVCFVLYKLTSFQAS*INSADF
Trigger: AAAATCAGCAGAGTTGATGCAGCTAGCCTGAAAGGA...TGTAAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR-3UTR GCA 90 bp GTTTTACAGTTGTCCTTAAAGGGAAGGAGCAAGGATGCACTGAGAAATCACTTTTCAAGAACCAAGCCATaGATATGTTCGTGTATTCAT +
Preference number: 2 (lower is better)
Translates to: VLQLSLKGRSKDALRNHFSRTKP*ICSCIH
Trigger: ATGAATACACGAACATATGCATGGCTTGGTTCTTGA...AAAGTGATTTCTCAGTGCATCCTTGCTCCTTCCCTTTAAGGACAACTGTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
3UTR CAA 90 bp ATGACATTAACAAGATTTTGCCAGGTTATAAAAATGAGGGCTTTCTaGAGAATTACTTATAGTTTCCGAGTTGAATGGCAGAGCGCACGT +
Preference number: 2 (lower is better)
Translates to: MTLTRFCQVIKMRAF*RITYSFRVEWQSAR
Trigger: ACGTGCGCTCTGCCATTCAACTCGGAAACTATAAGTAATTCTCAAGAAAGCCCTCATTTTTATAACCTGGCAAAATCTTGTTAATGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR CAA 90 bp TTTCACTTTGAACAATTGACTTATGCCTTTTTACATAACAGAGAATaGGAAAACTGGCCCAGTGCTTTCATCAGGGTCAAGGTTTATGAG +
Preference number: 2 (lower is better)
Translates to: FHFEQLTYAFLHNRE*ENWPSAFIRVKVYE
Trigger: CTCATAAACCTTGACCCTGATGAAAGCACTGGGCCAGTTTTCCAATTCTCTGTTATGTAAAAAGGCATAAGTCAATTGTTCAAAGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR-3UTR TCA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGATTAAAGGCTATAGCATaGAGGGTGCATTATTCATGG +
Preference number: 2 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRLKAIA*RVHYSW
Trigger: CCATGAATAATGCACCCTTCATGCTATAGCCTTTAA...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR TCA 90 bp AAAATACCTTGCATGAGACCACTGCTCATTGGAACTTACTTAGTTCCCTTAGTTTATCCTGCGGCCTTTTaGAAGTCTTCATATAACATT +
Preference number: 2 (lower is better)
Translates to: KIPCMRPLLIGTYLVPLVYPAAF*KSSYNI
Trigger: AATGTTATATGAAGACTTTCAAAAGGCCGCAGGATA...AACTAAGGGAACTAAGTAAGTTCCAATGAGCAGTGGTCTCATGCAAGGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR-3UTR GCA 90 bp GTCATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAAAGATTATGATATCCTaGAGCTGCCTCTGCAATAAA +
Preference number: 2 (lower is better)
Translates to: VISVLIKKDHNLYSGISRKIMIS*SCLCNK
Trigger: TTTATTGCAGAGGCAGCTGCAGGATATCATAATCTT...TCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR CCA 90 bp GTCATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGACGAAATATTCTCTCTTaGCCTATTCCTGTTACCTTA +
Preference number: 2 (lower is better)
Translates to: VISVLIKKDHNLYSGISRRNILS*PIPVTL
Trigger: TAAGGTAACAGGAATAGGCCAAGAGAGAATATTTCG...TCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 90 bp AAGTTGAATATGCATCTCAAAAAGAACAGATTCAAAACCAGATATTaGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCT +
Preference number: 2 (lower is better)
Translates to: KLNMHLKKNRFKTRY*ILSSSSSTSQSLPS
Trigger: AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGTTTTGAATCTGTTCTTTTTGAGATGCATATTCAACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR TCA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGATTATGGACAAGGAAATaGGTCACAGAAAGGTTAACT +
Preference number: 2 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRLWTRK*VTERLT
Trigger: AGTTAACCTTTCTGTGACTCATTTCCTTGTCCATAA...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR TCA 90 bp ACTAAAACAGTCCATGCATTTTTCCAGAGGCATCAAATTATCCTGCAGAGTAATTCCCGATATAGCTTCTaGATGACTGAACAAATAGAT +
Preference number: 2 (lower is better)
Translates to: TKTVHAFFQRHQIILQSNSRYSF*MTEQID
Trigger: ATCTATTTGTTCAGTCATTCAGAAGCTATATCGGGA...ATTACTCTGCAGGATAATTTGATGCCTCTGGAAAAATGCATGGACTGTTTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR-3UTR GCA 90 bp ATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAATTCAGATTTTATGGTCCTaGAAGAATGTGGAAAGATGG +
Preference number: 2 (lower is better)
Translates to: ISVLIKKDHNLYSGISRIQILWS*KNVERW
Trigger: CCATCTTTCCACATTCTTGCAGGACCATAAAATCTG...AATTCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR GCA 90 bp TCCAATTACAAGGTAAGTTGCAACAAGTTCAATGAAACAACTTGGCCAATATCTATAAGCATTAACATTTaGCATCCCCAACTGCATTGC +
Preference number: 2 (lower is better)
Translates to: SNYKVSCNKFNETTWPISISINI*HPQLHC
Trigger: GCAATGCAGTTGGGGATGGCAAATGTTAATGCTTAT...AGATATTGGCCAAGTTGTTTCATTGAACTTGTTGCAACTTACCTTGTAATTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR-3UTR GCA 90 bp ATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAATTCTCTCACCTGATTATTaGACTAGCATCCGAAATATT +
Preference number: 2 (lower is better)
Translates to: ISVLIKKDHNLYSGISRILSPDY*TSIRNI
Trigger: AATATTTCGGATGCTAGTGCAATAATCAGGTGAGAG...AATTCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR CCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCTACAGAGCTAGTGTTTaGCATTTGACTTTATCTCAA +
Preference number: 2 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFYRASV*HLTLSQ
Trigger: TTGAGATAAAGTCAAATGCCAAACACTAGCTCTGTA...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
3UTR-3UTR CCA 90 bp ATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAATTACTATTATGCATCTATaGAAACCCACCTCAACTGTT +
Preference number: 2 (lower is better)
Translates to: ISVLIKKDHNLYSGISRITIMHL*KPTSTV
Trigger: AACAGTTGAGGTGGGTTTCCATAGATGCATAATAGT...AATTCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR CCA 90 bp TCCAATTACAAGGTAAGTTGCAACAAGTTCAATGAAACAACTTGGCCAATATCTAGAAGGAAGTACACATaGCGGAATCATGATATAAAG +
Preference number: 2 (lower is better)
Translates to: SNYKVSCNKFNETTWPISRRKYT*RNHDIK
Trigger: CTTTATATCATGATTCCGCCATGTGTACTTCCTTCT...AGATATTGGCCAAGTTGTTTCATTGAACTTGTTGCAACTTACCTTGTAATTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR-3UTR CCA 90 bp TCCAATTACAAGGTAAGTTGCAACAAGTTCAATGAAACAACTTGGCCAATATCTTGCCTGATCATAGTATaGAATTTCTTCCAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: SNYKVSCNKFNETTWPISCLIIV*NFFQKE
Trigger: TTCCTTCTGGAAGAAATTCCATACTATGATCAGGCA...AGATATTGGCCAAGTTGTTTCATTGAACTTGTTGCAACTTACCTTGTAATTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR-3UTR CCA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGTCTATGACAATCATCTaGTTCAGTCCATTGAAAGTA +
Preference number: 2 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGSMTII*FSPLKV
Trigger: TACTTTCAATGGACTGAACCAGATGATTGTCATAGA...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR TCA 72 bp TTCCGAGTTGAATGGCAGAGCGCACGTAGACACATCTaGAGGTGGATGGCTGTATCTCCCAGTACTGGACCG +
Preference number: 3 (lower is better)
Translates to: FRVEWQSARRHI*RWMAVSPSTGP
Trigger: CGGTCCAGTACTGGGAGATACAGCCATCCACCTTCAGATGTGTCTACGTGCGCTCTGCCATTCAACTCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR CCA 72 bp AATGGCAGAGCGCACGTAGACACATCTGAAGGTGGATaGCTGTATCTCCCAGTACTGGACCGGGTTGCTGAA +
Preference number: 3 (lower is better)
Translates to: NGRAHVDTSEGG*LYLPVLDRVAE
Trigger: TTCAGCAACCCGGTCCAGTACTGGGAGATACAGCCATCCACCTTCAGATGTGTCTACGTGCGCTCTGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR CCA 72 bp TGTTGTCCAAGTGAAGCTCCCTCAGATGAGGCGTGTTaGCCAGAGAGCCATTGTCAACAGCAGAGATGCTGT +
Preference number: 3 (lower is better)
Translates to: CCPSEAPSDEAC*PESHCQQQRCC
Trigger: ACAGCATCTCTGCTGTTGACAATGGCTCTCTGGCCAACACGCCTCATCTGAGGGAGCTTCACTTGGACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR CCA 72 bp CATTCAGCCCTCACAGTCACTGCAGAATGTGTGGCCTaGGAAGAGTCTCCTGATCTCCAATGCCTAAGTGAT +
Preference number: 3 (lower is better)
Translates to: HSALTVTAECVA*EESPDLQCLSD
Trigger: ATCACTTAGGCATTGGAGATCAGGAGACTCTTCCCAGGCCACACATTCTGCAGTGACTGTGAGGGCTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR GCA 72 bp TGCAACATCTGCTTCAGAGGGCAAGGCATTATGCACTaGTGTGTCTCTGCCACTAGAACACTGTCAAGCACA +
Preference number: 3 (lower is better)
Translates to: CNICFRGQGIMH*CVSATRTLSST
Trigger: TGTGCTTGACAGTGTTCTAGTGGCAGAGACACAGCAGTGCATAATGCCTTGCCCTCTGAAGCAGATGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 72 bp CTTCTTCATTCCCTGGAAAGCCCCATTTTCAATTCCTaGGCTCTTCAGCGGATTGGTGCCCAGTTCTATGAC +
Preference number: 3 (lower is better)
Translates to: LLHSLESPIFNS*ALQRIGAQFYD
Trigger: GTCATAGAACTGGGCACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGGGCTTTCCAGGGAATGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR-3UTR CAA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGCCTCCCCACCAAATCTaGCTCTTGAACTATTATGCA +
Preference number: 3 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKPPHQI*LLNYYA
Trigger: TGCATAATAGTTCAAGAGCAAGATTTGGTGGGGAGG...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR CAA 90 bp GCCTTTTTGGTGTTGTGTCCAGGTGGGCAGAAGTCACTTGATCCAACTACAGAGACAGCAGAGATGCTGTaGAAACTCAATCCCAACTTA +
Preference number: 3 (lower is better)
Translates to: AFLVLCPGGQKSLDPTTETAEML*KLNPNL
Trigger: TAAGTTGGGATTGAGTTTCAACAGCATCTCTGCTGT...CTCTGTAGTTGGATCAAGTGACTTCTGCCCACCTGGACACAACACCAAAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR GCA 72 bp TTCTCACCACACTTGTCAGTTAAGCAGCAGGATATCTaGAGGCTTTTCCCCATAAGAGAAAGGCTGCAGCAT +
Preference number: 3 (lower is better)
Translates to: FSPHLSVKQQDI*RLFPIRERLQH
Trigger: ATGCTGCAGCCTTTCTCTTATGGGGAAAAGCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR GCA 72 bp ACTTTAATTGTCATGTCCTGGAATGTCTCCTCCTGCTaGAACATCTGCTTCAGAGGGCAAGGCATTATGCAC +
Preference number: 3 (lower is better)
Translates to: TLIVMSWNVSSC*NICFRGQGIMH
Trigger: GTGCATAATGCCTTGCCCTCTGAAGCAGATGTTGCAGCAGGAGGAGACATTCCAGGACATGACAATTAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR GCA 72 bp TCCACTTTAATTGTCATGTCCTGGAATGTCTCCTCCTaGTGCAACATCTGCTTCAGAGGGCAAGGCATTATG +
Preference number: 3 (lower is better)
Translates to: STLIVMSWNVSS*CNICFRGQGIM
Trigger: CATAATGCCTTGCCCTCTGAAGCAGATGTTGCAGCAGGAGGAGACATTCCAGGACATGACAATTAAAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CCA 72 bp ACGAGAGGACTCTCTGCTGACTTATTTCTCCAAGTGTaGACCAAGAAGCAGCAGCATTCCTGGAAGTTTGTT +
Preference number: 3 (lower is better)
Translates to: TRGLSADLFLQV*TKKQQHSWKFV
Trigger: AACAAACTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGAGAGTCCTCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CCA 72 bp CATAATACTCAGGAGGCAACTCACCCAGTCCTTTTCTaGTTATCTTATACTGGGGTAGGGTGTGCATATGCC +
Preference number: 3 (lower is better)
Translates to: HNTQEATHPVLF*LSYTGVGCAYA
Trigger: GGCATATGCACACCCTACCCCAGTATAAGATAACCAGAAAAGGACTGGGTGAGTTGCCTCCTGAGTATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CCA 72 bp CTTAGAGGATGGGTCAGTAGGGCCAGCAAACCACCATaGCACACGTATACCTATATAACAAACCTGCACATT +
Preference number: 3 (lower is better)
Translates to: LRGWVSRASKPP*HTYTYITNLHI
Trigger: AATGTGCAGGTTTGTTATATAGGTATACGTGTGCCATGGTGGTTTGCTGGCCCTACTGACCCATCCTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
3UTR TCA 72 bp TATAACATGGAGTGTGCATCATTGAAGGCTACAACATaGAGGGTGCGTCACTCAAGGCTACACCATAAAGGG +
Preference number: 3 (lower is better)
Translates to: YNMECASLKATT*RVRHSRLHHKG
Trigger: CCCTTTATGGTGTAGCCTTGAGTGACGCACCCTTCATGTTGTAGCCTTCAATGATGCACACTCCATGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 72 bp TCACCCCCTTCACATCCCTTATTCCCCAGTTCTGCTTaGCATTCCTCCACTTTAATTGTCATGTCCTGGAAT +
Preference number: 3 (lower is better)
Translates to: SPPSHPLFPSSA*HSSTLIVMSWN
Trigger: ATTCCAGGACATGACAATTAAAGTGGAGGAATGTCAAGCAGAACTGGGGAATAAGGGATGTGAAGGGGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 72 bp AGTCTATACACGCAAAGGGATCCTCTCAAAGACAGTTaGATCAAGTCACTCCTCTACCGAGACCCCTCTAAT +
Preference number: 3 (lower is better)
Translates to: SLYTQRDPLKDS*IKSLLYRDPSN
Trigger: ATTAGAGGGGTCTCGGTAGAGGAGTGACTTGATTCAACTGTCTTTGAGAGGATCCCTTTGCGTGTATAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR GCA 72 bp CTGCTCACGTTTGTCCTCTCTGCTCTTGTTGGAACGTaGCATGTATTTTCCAAATTCAGGGCCTCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: LLTFVLSALVGT*HVFSKFRASFL
Trigger: AAGAAAAGAGGCCCTGAATTTGGAAAATACATGGCACGTTCCAACAAGAGCAGAGAGGACAAACGTGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR GCA 72 bp CAAGAAGCAGCAGCATTCCTGGAAGTTTGTTTGAAATaGAGAATCTCAGACCTCGATCCAGAACTGACACAT +
Preference number: 3 (lower is better)
Translates to: QEAAAFLEVCLK*RISDLDPELTH
Trigger: ATGTGTCAGTTCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAATGCTGCTGCTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR CAA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGCACCAAATCTTGCTCTaGAACTATTATGCATCTATG +
Preference number: 3 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKHQILL*NYYASM
Trigger: CATAGATGCATAATAGTTCAAGAGCAAGATTTGGTG...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR CAA 90 bp TTTCTGCAGATGGAGATGTCAAGGCTCTCAACAGCTTGCCAGCATCATAAAGTAGAACAAATAGATCCATaGGAATTATCCTGCGGCCTT +
Preference number: 3 (lower is better)
Translates to: FLQMEMSRLSTACQHHKVEQIDP*ELSCGL
Trigger: AAGGCCGCAGGATAATTCCAATGGATCTATTTGTTC...TACTTTATGATGCTGGCAAGCTGTTGAGAGCCTTGACATCTCCATCTGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR GCA 72 bp TCTTGCTCACTTTACTCTGCTCACGTTTGTCCTCTCTaGTCTTGTTGGAACGTGCCATGTATTTTCCAAATT +
Preference number: 3 (lower is better)
Translates to: SCSLYSAHVCPL*SCWNVPCIFQI
Trigger: AATTTGGAAAATACATGGCACGTTCCAACAAGAGCAGAGAGGACAAACGTGAGCAGAGTAAAGTGAGCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR CAA 90 bp TTTCTACTTATTTCTCACCACACTTGTCAGTTAAGCAGCAGGATATCTGCAGGCCATACGTCTTGGATTTaGAACTTAGTCCCTGTCTTG +
Preference number: 3 (lower is better)
Translates to: FLLISHHTCQLSSRISAGHTSWI*NLVPVL
Trigger: CAAGACAGGGACTAAGTTCAAAATCCAAGACGTATG...GCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAGAAATAAGTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 72 bp CAGAGCTCATCCATGATGGGTTCCCGATATAGCTTCTaGATGACTGAACAAATAGATCCATTGGAATTATCC +
Preference number: 3 (lower is better)
Translates to: QSSSMMGSRYSF*MTEQIDPLELS
Trigger: GGATAATTCCAATGGATCTATTTGTTCAGTCATTCAGAAGCTATATCGGGAACCCATCATGGATGAGCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR CCA 72 bp ACAGAAAACCAAATACTGCATGTTCTCACGCATAAATaGAAGTTGAATGCTGAGAACACACGGACACAGAGA +
Preference number: 3 (lower is better)
Translates to: TENQILHVLTHK*KLNAENTRTQR
Trigger: TCTCTGTGTCCGTGTGTTCTCAGCATTCAACTTCCATTTATGCGTGAGAACATGCAGTATTTGGTTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550758.1
3UTR GCA 72 bp TGTATCATATATTATCTCTTCTTGCTCACTTTACTCTaGTCACGTTTGTCCTCTCTGCTCTTGTTGGAACGT +
Preference number: 3 (lower is better)
Translates to: CIIYYLFLLTLL*SRLSSLLLLER
Trigger: ACGTTCCAACAAGAGCAGAGAGGACAAACGTGAGCAGAGTAAAGTGAGCAAGAAGAGATAATATATGATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 72 bp TGCATCTCAAAAAGAACAGATTCAAAACCAGATATTTaGTTCTCAGTTCTTCCAGCTCAACCTCCCAGTCAT +
Preference number: 3 (lower is better)
Translates to: CISKRTDSKPDI*FSVLPAQPPSH
Trigger: ATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGTTTTGAATCTGTTCTTTTTGAGATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 72 bp GGCAACAACAAAACTGTCATAAAGATCCCAAGTCAGTaGACTTGCTGCTTCCTAAGACTACATTTTGTTGTT +
Preference number: 3 (lower is better)
Translates to: GNNKTVIKIPSQ*TCCFLRLHFVV
Trigger: AACAACAAAATGTAGTCTTAGGAAGCAGCAAGTTCACTGACTTGGGATCTTTATGACAGTTTTGTTGTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR TCA 72 bp GCAACAAGTTCAATGAAACAACTTGGCCAATATCTATaGGGAATTCATGTTTACTGTCTCAATCCCTCATCC +
Preference number: 3 (lower is better)
Translates to: ATSSMKQLGQYL*GIHVYCLNPSS
Trigger: GGATGAGGGATTGAGACAGTAAACATGAATTCCTCATAGATATTGGCCAAGTTGTTTCATTGAACTTGTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR GCA 72 bp GCTCATCTTTACAATGGCCTAAAAAGTCCTACAGGATaGGATTGTCATTACCTTTCTGACCTTGTATCATAT +
Preference number: 3 (lower is better)
Translates to: AHLYNGLKSPTG*DCHYLSDLVSY
Trigger: ATATGATACAAGGTCAGAAAGGTAATGACAATCGCATCCTGTAGGACTTTTTAGGCCATTGTAAAGATGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CCA 72 bp CTCTGTCTTACTCAGAGTAAAAGCTCATCTTTACAATaGCCTAAAAAGTCCTACAGGATGCGATTGTCATTA +
Preference number: 3 (lower is better)
Translates to: LCLTQSKSSSLQ*PKKSYRMRLSL
Trigger: TAATGACAATCGCATCCTGTAGGACTTTTTAGGCCATTGTAAAGATGAGCTTTTACTCTGAGTAAGACAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CCA 72 bp ATAAAAAGGAATGGGATCATGTCCTTTACAAGGACATaGATGAAACTAGAAGCCATCATCCTCAGCAAACTA +
Preference number: 3 (lower is better)
Translates to: IKRNGIMSFTRT*MKLEAIILSKL
Trigger: TAGTTTGCTGAGGATGATGGCTTCTAGTTTCATCCATGTCCTTGTAAAGGACATGATCCCATTCCTTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550758.1
3UTR TCA 72 bp TACAATAAGAAGGGTGAATCGTTAAAGGCTATAGCATaGAGGGTGCATTATTCATGGTTACAACAGAGAGAA +
Preference number: 3 (lower is better)
Translates to: YNKKGESLKAIA*RVHYSWLQQRE
Trigger: TTCTCTCTGTTGTAACCATGAATAATGCACCCTTCATGCTATAGCCTTTAACGATTCACCCTTCTTATTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR-3UTR CAA 90 bp ACTAAAACAGTCCATGCATTTTTCCAGAGGCATCAAATTATCCTGCAGAGTAATAATATTGAAAATACCTaGCATGAGACCACTGCTCAT +
Preference number: 3 (lower is better)
Translates to: TKTVHAFFQRHQIILQSNNIENT*HETTAH
Trigger: ATGAGCAGTGGTCTCATGCAAGGTATTTTCAATATT...ATTACTCTGCAGGATAATTTGATGCCTCTGGAAAAATGCATGGACTGTTTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR TCA 72 bp ATTAGGCAATTCTTCCTTCGTATAAAGATAAGATTATaGTATCCTGCAGCTGCCTCTGCAATAAAATTGTGG +
Preference number: 3 (lower is better)
Translates to: IRQFFLRIKIRL*YPAAASAIKLW
Trigger: CCACAATTTTATTGCAGAGGCAGCTGCAGGATATCATAATCTTATCTTTATACGAAGGAAGAATTGCCTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 72 bp AGATCTAAATCCTCCTTGACACCTCCATATGGAAGTTaGATATGCATCTCAAAAAGAACAGATTCAAAACCA +
Preference number: 3 (lower is better)
Translates to: RSKSSLTPPYGS*ICISKRTDSKP
Trigger: TGGTTTTGAATCTGTTCTTTTTGAGATGCATATTCAACTTCCATATGGAGGTGTCAAGGAGGATTTAGATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR TCA 72 bp TGGTTCCAATTACAAGGTAAGTTGCAACAAGTTCAATaGAACAACTTGGCCAATATCTATGAGGAATTCATG +
Preference number: 3 (lower is better)
Translates to: WFQLQGKLQQVQ*NNLANIYEEFM
Trigger: CATGAATTCCTCATAGATATTGGCCAAGTTGTTTCATTGAACTTGTTGCAACTTACCTTGTAATTGGAACCA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR TCA 72 bp ACTGCGTTATCAGTTAGACCAGGCTTCATACATAGATaGTTCTTCTCTTTAATTCTATTCTCTTTCCAGTCA +
Preference number: 3 (lower is better)
Translates to: TALSVRPGFIHR*FFSLILFSFQS
Trigger: TGACTGGAAAGAGAATAGAATTAAAGAGAAGAATCATCTATGTATGAAGCCTGGTCTAACTGATAACGCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546745.5
3UTR TCA 72 bp AACACCATAGTTGAGCCCTTTCCATTTACTCTACTTTaGTCTATAAGTTATATTCTACACTCGCTAACTGAA +
Preference number: 3 (lower is better)
Translates to: NTIVEPFPFTLL*SISYILHSLTE
Trigger: TTCAGTTAGCGAGTGTAGAATATAACTTATAGATCAAAGTAGAGTAAATGGAAAGGGCTCAACTATGGTGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp ACTTGTGGCTTCAAACTCCCCCTACTCACTATGGCACCAACATCACCACCCCTAACAGGGGGTAGGGGGTaGGCGGGCGAACTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: TCGFKLPLLTMAPTSPPLTGGRG*AGELRG
Trigger: TCCTCTAAGTTCGCCCGCTCACCCCCTACCCCCTGT...TAGGGGTGGTGATGTTGGTGCCATAGTGAGTAGGGGGAGTTTGAAGCCACAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR GCA 90 bp CAACAGGGGGTAGGGGGTGAGCGGGCGAACTTAGAGGATGGGTCAGTAGGGCCACTAAGAAGAGCTTCCTaGTTCCCAGCATCCCATAAG +
Preference number: 4 (lower is better)
Translates to: QQGVGGERANLEDGSVGPLRRAS*FPASHK
Trigger: CTTATGGGATGCTGGGAAGCAGGAAGCTCTTCTTAG...TGGCCCTACTGACCCATCCTCTAAGTTCGCCCGCTCACCCCCTACCCCCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR TCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSTRRWH*QRKGHT
Trigger: AGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGT...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp GCCTTTTTGGTGTTGTGTCCAGGTGGGCAGAAGTCACTTGATCCAACTACAGAGGGAGGAGGGGGTAGGTaGTGCTCTGTGACTAGGTTG +
Preference number: 4 (lower is better)
Translates to: AFLVLCPGGQKSLDPTTEGGGGR*CSVTRL
Trigger: CAACCTAGTCACAGAGCAGCACCTACCCCCTCCTCC...CTCTGTAGTTGGATCAAGTGACTTCTGCCCACCTGGACACAACACCAAAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR GCA 90 bp GAACTTAGAGGATGGGTCAGTAGGGCCAGCAAACCACCATGGCACACGTATACCACCTGGATGTACTTATaGTCTGCCAGCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: ELRGWVSRASKPPWHTYTTWMYL*SASPPG
Trigger: ACCTGGTGGGCTGGCAGAGCATAAGTACATCCAGGT...GGTATACGTGTGCCATGGTGGTTTGCTGGCCCTACTGACCCATCCTCTAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR CCA 90 bp GGCTTCAAACTCCCCCTACTCACTATGGCACCAACATCACCACCCCTACTGAAATCCCCCTACTCACTATaGCACCAACATCACCACCCC +
Preference number: 4 (lower is better)
Translates to: GFKLPLLTMAPTSPPLLKSPYSL*HQHHHP
Trigger: GGGGTGGTGATGTTGGTGCCATAGTGAGTAGGGGGA...TTTCAGTAGGGGTGGTGATGTTGGTGCCATAGTGAGTAGGGGGAGTTTGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR TCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCAGCTGCCATGTAAACTaGGTTCATTCCCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSSCHVN*VHSPLA
Trigger: GGCCAAAGGGGAATGAACTCAGTTTACATGGCAGCT...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCATCCAGGCAAGATGCTaGTTTCTCCCTCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSIQARC*FLPLLC
Trigger: GCAGAGAAGAGGGAGAAAGCAGCATCTTGCCTGGAT...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCGGAAAACTGGCCCAGTaGTTTCATCAGGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSGKLAQ*FHQGQG
Trigger: ACCTTGACCCTGATGAAAGCACTGGGCCAGTTTTCC...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCAGCCCAGGAAACTTGTaGAAGCAGAAGGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSSPGNL*KQKEDD
Trigger: ATCATCCTCCTTCTGCTTGCACAAGTTTCCTGGGCT...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR CCA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTGCAGAATGTGTGGCCTaGGAAGAGTCTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWIAECVA*EESPDL
Trigger: GAGATCAGGAGACTCTTCCCAGGCCACACATTCTGC...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp TGGAAAGCCCCATTTTCAATTCCTGAGCTCTTCAGCGGATTGGTGCCCAGTTCTGCACGTAGACACATCTaGAGGTGGATGGCTGTATCT +
Preference number: 4 (lower is better)
Translates to: WKAPFSIPELFSGLVPSSARRHI*RWMAVS
Trigger: AGATACAGCCATCCACCTTCAGATGTGTCTACGTGC...AGAACTGGGCACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGGGCTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR TCA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGGAGTTGTTGTGTGTGTaGAGGGGCAGTCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKELLCV*RGSLGL
Trigger: CAGTCCAAGACTGCCCCTTCACACACACAACAACTC...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCAAGATCCCAAGTCAGTaGACTTGCTGCTTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSKIPSQ*TCCFLR
Trigger: TCTTAGGAAGCAGCAAGTTCACTGACTTGGGATCTT...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR TCA 90 bp GAACTTAGAGGATGGGTCAGTAGGGCCAGCAAACCACCATGGCACACGTATACCCGCATAAATGGAAGTTaGATGCTGAGAACACACGGA +
Preference number: 4 (lower is better)
Translates to: ELRGWVSRASKPPWHTYTRINGS*MLRTHG
Trigger: TCCGTGTGTTCTCAGCATTCAACTTCCATTTATGCG...GGTATACGTGTGCCATGGTGGTTTGCTGGCCCTACTGACCCATCCTCTAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR CCA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTAGTTTCCGAGTTGAATaGCAGAGCGCACGTAGACAC +
Preference number: 4 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWISFRVE*QSARRH
Trigger: GTGTCTACGTGCGCTCTGCCATTCAACTCGGAAACT...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 72 bp CCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTTaGAACTTAGTCCCTGTCTTGAATAGTGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PVRGVSQHTSWI*NLVPVLNSASP
Trigger: TGGGGAGGCACTATTCAAGACAGGGACTAAGTTCAAAATCCAAGACGTATGCTGGGACACACCTCTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGCTACAACATGAAGGGTaGGTCACTCAAGGCTACACC +
Preference number: 4 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKLQHEG*VTQGYT
Trigger: GGTGTAGCCTTGAGTGACGCACCCTTCATGTTGTAG...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGAATGTCTCCTCCTGCTaGAACATCTGCTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKNVSSC*NICFRG
Trigger: CCCTCTGAAGCAGATGTTGCAGCAGGAGGAGACATT...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp ACTTGTGGCTTCAAACTCCCCCTACTCACTATGGCACCAACATCACCACCCCTATGGCTTTGCATTACCTaGATGTACTTATGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TCGFKLPLLTMAPTSPPLWLCIT*MYLCSA
Trigger: GGCAGAGCATAAGTACATCCAGGTAATGCAAAGCCA...TAGGGGTGGTGATGTTGGTGCCATAGTGAGTAGGGGGAGTTTGAAGCCACAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR TCA 90 bp GCTGGTGATATTGGTATCAGCAATGCGGATGTAGGAGAGCTTCTTCATTCCCTGCTTTTCGCACTTTGGTaGTCTCATTCTCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: AGDIGISNADVGELLHSLLFALW*SHSHGH
Trigger: GTGCCCATGAGAATGAGATCACCAAAGTGCGAAAAG...CAGGGAATGAAGAAGCTCTCCTACATCCGCATTGCTGATACCAATATCACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR TCA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGCCCATTTTCAATTCCTaGGCTCTTCAGCGGATTGGT +
Preference number: 4 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKPIFNS*ALQRIG
Trigger: ACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGG...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTGAGTCTGAAGGACAGTaGAGTCTTGTGAAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWIESEGQ*SLVKSC
Trigger: ACAACTCTTCACAAGACTTCACTGTCCTTCAGACTC...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTTTCTATGCTTGTTCCTaGTGGCCTGGAAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWIFYACS*WPGSIH
Trigger: ATGAATGCTTCCAGGCCATCAGGAACAAGCATAGAA...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTCTCTCATGCCCCATCTaGTCATTCAGCCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSLSCPI*SFSHPW
Trigger: CCAGGGATGGCTGAATGATCAGATGGGGCATGAGAG...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCAATTTTAACACTGCATaGAGCTGCTACTATGACCCA +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSNFNTA*SCYYDP
Trigger: TGGGTCATAGTAGCAGCTTCATGCAGTGTTAAAATT...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp GCTGGTGATATTGGTATCAGCAATGCGGATGTAGGAGAGCTTCTTCATTCCCTGTTTAATCCGGGAATTTaGCACAGGAGCCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: AGDIGISNADVGELLHSLFNPGI*HRSPQS
Trigger: GCTTTGAGGGCTCCTGTGGCAAATTCCCGGATTAAA...CAGGGAATGAAGAAGCTCTCCTACATCCGCATTGCTGATACCAATATCACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCTACATAACAGAGAATTaGAAAACTGGCCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSYITEN*KTGPVL
Trigger: AAGCACTGGGCCAGTTTTCCAATTCTCTGTTATGTA...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR CCA 90 bp GAACTTAGAGGATGGGTCAGTAGGGCCAGCAAACCACCATGGCACACGTATACCGTTCTCACGCATAAATaGAAGTTGAATGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ELRGWVSRASKPPWHTYTVLTHK*KLNAEN
Trigger: GTTCTCAGCATTCAACTTCCATTTATGCGTGAGAAC...GGTATACGTGTGCCATGGTGGTTTGCTGGCCCTACTGACCCATCCTCTAAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR TCA 90 bp AGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCTACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: RNHFCFSIRHVPFSLQLATRRWH*QRKGHT
Trigger: AGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGT...AGCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR TCA 90 bp TTTGGTGATCTCATTCTCATGGGCACGCAGCTCCTGAAGAGTTTTGGGCATTTTCCCATTTTCAATTCCTaGGCTCTTCAGCGGATTGGT +
Preference number: 4 (lower is better)
Translates to: FGDLILMGTQLLKSFGHFPIFNS*ALQRIG
Trigger: ACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGG...AAAATGCCCAAAACTCTTCAGGAGCTGCGTGCCCATGAGAATGAGATCACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR TCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCTATCCTGCGGCCTTTTaGAAGTCTTCATATAACATT +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSYPAAF*KSSYNI
Trigger: AATGTTATATGAAGACTTTCAAAAGGCCGCAGGATA...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR TCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCATACTGCATTTACAATaGATGAGGTGGTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSILHLQ*MRWCIS
Trigger: AGAAATGCACCACCTCATTCATTGTAAATGCAGTAT...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR CCA 90 bp CTTGGACAGATAAAGTCGTTCCAACTTCACCAAAGGTGTAAATGCTCCAGGACTTCAGATGAGGCGTGTTaGCCAGAGAGCCATTGTCAA +
Preference number: 4 (lower is better)
Translates to: LGQIKSFQLHQRCKCSRTSDEAC*PESHCQ
Trigger: TTGACAATGGCTCTCTGGCCAACACGCCTCATCTGA...AGTCCTGGAGCATTTACACCTTTGGTGAAGTTGGAACGACTTTATCTGTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CCA 90 bp TTCTTCATTCCCTGGAAAGCCCCATTTTCAATTCCTGAGCTCTTCAGCGGATTGTGTATCTCCCAGTACTaGACCGGGTTGCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: FFIPWKAPFSIPELFSGLCISQY*TGLLKR
Trigger: TCTTTTCAGCAACCCGGTCCAGTACTGGGAGATACA...CAATCCGCTGAAGAGCTCAGGAATTGAAAATGGGGCTTTCCAGGGAATGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CCA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTACTGGAAAAGTGTGTTaGATCTGCCTTGCAGATAAG +
Preference number: 4 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWITGKVC*ICLADK
Trigger: CTTATCTGCAAGGCAGATCCAACACACTTTTCCAGT...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp TCCAAAATGGTCTTCCCCTCTTTAGATTTCTACTTATTTCTCACCACACTTGTCGTGAAGGGGCAGTCTTaGACTGGGACTGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SKMVFPSLDFYLFLTTLVVKGQS*TGTAWN
Trigger: GTTCCAGGCAGTCCCAGTCCAAGACTGCCCCTTCAC...GACAAGTGTGGTGAGAAATAAGTAGAAATCTAAAGAGGGGAAGACCATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp TGGCTTCAAACTCCCCCTACTCACTATGGCACCAACATCACCACCCCTACTGAATCCTTTACAAGGACATaGATGAAACTAGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: WLQTPPTHYGTNITTPTESFTRT*MKLEAI
Trigger: GATGGCTTCTAGTTTCATCCATGTCCTTGTAAAGGA...TTCAGTAGGGGTGGTGATGTTGGTGCCATAGTGAGTAGGGGGAGTTTGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550758.1
3UTR CAA 72 bp GTGGACCAAGAAGCAGCAGCATTCCTGGAAGTTTGTTaGAAATGCAGAATCTCAGACCTCGATCCAGAACTG +
Preference number: 4 (lower is better)
Translates to: VDQEAAAFLEVC*KCRISDLDPEL
Trigger: CAGTTCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAATGCTGCTGCTTCTTGGTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 72 bp CTCACCCCCTTCACATCCCTTATTCCCCAGTTCTGCTaGACATTCCTCCACTTTAATTGTCATGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LTPFTSLIPQFC*TFLHFNCHVLE
Trigger: TTCCAGGACATGACAATTAAAGTGGAGGAATGTCAAGCAGAACTGGGGAATAAGGGATGTGAAGGGGGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp TTCCATCTTAAAAATGGCAATCTGACTGCGTTATCAGTTAGACCAGGCTTCATAACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: FHLKNGNLTALSVRPGFITRRWH*QRKGHT
Trigger: AGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGT...TATGAAGCCTGGTCTAACTGATAACGCAGTCAGATTGCCATTTTTAAGATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546745.5
CDS-3UTR TCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTGCACGTAGACACATCTaGAGGTGGATGGCTGTATCT +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSARRHI*RWMAVS
Trigger: AGATACAGCCATCCACCTTCAGATGTGTCTACGTGC...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTCAGCAAAATCAAGAGTaGAATAACTGCAATGTCGAC +
Preference number: 4 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWIQQNQE*NNCNVD
Trigger: GTCGACATTGCAGTTATTTCACTCTTGATTTTGCTG...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGAGGAGGAGGGGGTAGGTaGTGCTCTGTGACTAGGTTG +
Preference number: 4 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRGGGGR*CSVTRL
Trigger: CAACCTAGTCACAGAGCAGCACCTACCCCCTCCTCC...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp CCATTGTCAACAGCAGAGATGCTGTTGAAACTCAATCCCAACTTAGCCAAATTAACCTGGATGTACTTATaGTCTGCCAGCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: PLSTAEMLLKLNPNLAKLTWMYL*SASPPG
Trigger: ACCTGGTGGGCTGGCAGAGCATAAGTACATCCAGGT...TAATTTGGCTAAGTTGGGATTGAGTTTCAACAGCATCTCTGCTGTTGACAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR GCA 90 bp GAGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCTTTCTCCCTCTTCTCTaGTCCCAAAGCACGTTGCTC +
Preference number: 4 (lower is better)
Translates to: EKSLLFLNQACSLLFAACFLPLL*SQSTLL
Trigger: GAGCAACGTGCTTTGGGAGCAGAGAAGAGGGAGAAA...GCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550099.5
CDS-3UTR GCA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCTTTGCCATCCCCAACTaGATTGCATTTATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSFAIPN*IAFIFF
Trigger: AAAGAAAATAAATGCAATGCAGTTGGGGATGGCAAA...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR CCA 90 bp TTTCTACTTATTTCTCACCACACTTGTCAGTTAAGCAGCAGGATATCTGCAGGCACTTCATCCTTCCAGTaGCCCAGGCCAAAATTCCTG +
Preference number: 4 (lower is better)
Translates to: FLLISHHTCQLSSRISAGTSSFQ*PRPKFL
Trigger: CAGGAATTTTGGCCTGGGCCACTGGAAGGATGAAGT...GCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAGAAATAAGTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 72 bp AAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGTTaGTTTGAAATGCAGAATCTCAGACCTCGATCCAGA +
Preference number: 4 (lower is better)
Translates to: KCGPRSSSIPGS*FEMQNLRPRSR
Trigger: TCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 72 bp AAAGCCCCATTTTCAATTCCTGAGCTCTTCAGCGGATaGGTGCCCAGTTCTATGACAATCATCTGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: KAPFSIPELFSG*VPSSMTIIWFS
Trigger: ACTGAACCAGATGATTGTCATAGAACTGGGCACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR TCA 90 bp AACATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: NISSLDQSGNVCFVLYKLTRRWH*QRKGHT
Trigger: AGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGT...AAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR TCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTETRRWH*QRKGHT
Trigger: AGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGT...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFTRRWH*QRKGHT
Trigger: AGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR TCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTTGGTGCCCAGTTCTATaGCAATCATCTGGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSWCPVL*QSSGSV
Trigger: GACTGAACCAGATGATTGTCATAGAACTGGGCACCA...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp GTTCAGTCCATTGAAAGTAACTTTTCGCACTTTGGTGATCTCATTCTCATGGGCTGGTGCCCAGTTCTATaGCAATCATCTGGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: VQSIESNFSHFGDLILMGWCPVL*QSSGSV
Trigger: GACTGAACCAGATGATTGTCATAGAACTGGGCACCA...GCCCATGAGAATGAGATCACCAAAGTGCGAAAAGTTACTTTCAATGGACTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR TCA 90 bp CTTGGACAGATAAAGTCGTTCCAACTTCACCAAAGGTGTAAATGCTCCAGGACTCTTGAGGAATGCTGGTaGTATTGGTATCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: LGQIKSFQLHQRCKCSRTLEECW*YWYQQC
Trigger: GCATTGCTGATACCAATATCACCAGCATTCCTCAAG...AGTCCTGGAGCATTTACACCTTTGGTGAAGTTGGAACGACTTTATCTGTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR TCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTGAAGGAGGAAGACCTTaGGGAATGCTGGTGATATTG +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSEGGRP*GMLVIL
Trigger: CAATATCACCAGCATTCCTCAAGGTCTTCCTCCTTC...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp GTTCAGTCCATTGAAAGTAACTTTTCGCACTTTGGTGATCTCATTCTCATGGGCGAAGGAGGAAGACCTTaGGGAATGCTGGTGATATTG +
Preference number: 4 (lower is better)
Translates to: VQSIESNFSHFGDLILMGEGGRP*GMLVIL
Trigger: CAATATCACCAGCATTCCTCAAGGTCTTCCTCCTTC...GCCCATGAGAATGAGATCACCAAAGTGCGAAAAGTTACTTTCAATGGACTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR TCA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTACTGGACCGGGTTGCTaGAAAGACTCACACCCGAAT +
Preference number: 4 (lower is better)
Translates to: ACIEFTHSNEALPVMMGITGPGC*KDSHPN
Trigger: ATTCGGGTGTGAGTCTTTTCAGCAACCCGGTCCAGT...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR TCA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTACCAAATCTTGCTCTTaGACTATTATGCATCTATGG +
Preference number: 4 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWITKSCS*TIMHLW
Trigger: CCATAGATGCATAATAGTTCAAGAGCAAGATTTGGT...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTTGGAGTGTGCATCATTaGAGGCTACAACATGAAGGG +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSWSVHH*RLQHEG
Trigger: CCCTTCATGTTGTAGCCTTCAATGATGCACACTCCA...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp TTCCTGGAAGTTTGTTTGAAATGCAGAATCTCAGACCTCGATCCAGAACTGACAGAGAGGACTCTCTGCTaGCTTATTTCTCCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: FLEVCLKCRISDLDPELTERTLC*LISPSV
Trigger: CACACTTGGAGAAATAAGTCAGCAGAGAGTCCTCTC...TGTCAGTTCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp GAGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCAGCCCAGGAAACTTGTaGAAGCAGAAGGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: EKSLLFLNQACSLLFAACSPGNL*KQKEDD
Trigger: ATCATCCTCCTTCTGCTTGCACAAGTTTCCTGGGCT...GCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR GCA 90 bp AGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCTATCCAGGCAAGATGCTaGTTTCTCCCTCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RNHFCFSIRHVPFSLQLAIQARC*FLPLLC
Trigger: GCAGAGAAGAGGGAGAAAGCAGCATCTTGCCTGGAT...AGCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550099.5
CDS-3UTR CCA 90 bp ACCGAGACCCCTCTAATAGCTCTCTGTCTTACTCAGAGTAAAAGCTCATCTTTAACATCTGAAGGTGGATaGCTGTATCTCCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: TETPLIALCLTQSKSSSLTSEGG*LYLPVL
Trigger: CAGTACTGGGAGATACAGCCATCCACCTTCAGATGT...TAAAGATGAGCTTTTACTCTGAGTAAGACAGAGAGCTATTAGAGGGGTCTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp GTTCAGTCCATTGAAAGTAACTTTTCGCACTTTGGTGATCTCATTCTCATGGGCACATCTGAAGGTGGATaGCTGTATCTCCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: VQSIESNFSHFGDLILMGTSEGG*LYLPVL
Trigger: CAGTACTGGGAGATACAGCCATCCACCTTCAGATGT...GCCCATGAGAATGAGATCACCAAAGTGCGAAAAGTTACTTTCAATGGACTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR CAA 72 bp CAGCATACGTCTTGGATTTTGAACTTAGTCCCTGTCTaGAATAGTGCCTCCCCACCAAATCTTGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: QHTSWILNLVPV*NSASPPNLALE
Trigger: TTCAAGAGCAAGATTTGGTGGGGAGGCACTATTCAAGACAGGGACTAAGTTCAAAATCCAAGACGTATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 72 bp CATGTATTTTCCAAATTCAGGGCCTCTTTTCTTGGCTaGCTCCCTTCAGTTCTTCATCTCCCTGCTCAAATG +
Preference number: 4 (lower is better)
Translates to: HVFSKFRASFLG*LPSVLHLPAQM
Trigger: CATTTGAGCAGGGAGATGAAGAACTGAAGGGAGCAAGCCAAGAAAAGAGGCCCTGAATTTGGAAAATACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp GTCATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAAATAAGCCTCTCTGTTaGAACGGTCCAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VISVLIKKDHNLYSGISRNKPLC*NGPAQE
Trigger: TTCCTGGGCTGGACCGTTTCAACAGAGAGGCTTATT...TCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp CTGCTACTATTAGCAGAATTGATTACCTCTCATGTGAGCCACTACTATAACTTGTGGGCACGCAGCTCCTaGAGAGTTTTGGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: LLLLAELITSHVSHYYNLWARSS*RVLGIF
Trigger: AAAAATGCCCAAAACTCTTCAGGAGCTGCGTGCCCA...CAAGTTATAGTAGTGGCTCACATGAGAGGTAATCAATTCTGCTAATAGTAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGACTGGACCGGGTTGCTaGAAAGACTCACACCCGAAT +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTETGPGC*KDSHPN
Trigger: ATTCGGGTGTGAGTCTTTTCAGCAACCCGGTCCAGT...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR TCA 90 bp ATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTACAACTGGACCGGGTTGCTaGAAAGACTCACACCCGAAT +
Preference number: 4 (lower is better)
Translates to: ISSLDQSGNVCFVLYKLTTGPGC*KDSHPN
Trigger: ATTCGGGTGTGAGTCTTTTCAGCAACCCGGTCCAGT...TGTAAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCACTGGACCGGGTTGCTaGAAAGACTCACACCCGAAT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFTGPGC*KDSHPN
Trigger: ATTCGGGTGTGAGTCTTTTCAGCAACCCGGTCCAGT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR GCA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGGTTATTTTGTTGTTTTaGAGGTCTAGCAGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKVILLF*RSSRVV
Trigger: CACAACTCTGCTAGACCTGCAAAACAACAAAATAAC...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCACCTGGATGTACTTATaGTCTGCCAGCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFTWMYL*SASPPG
Trigger: ACCTGGTGGGCTGGCAGAGCATAAGTACATCCAGGT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR GCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGACCTGGATGTACTTATaGTCTGCCAGCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTETWMYL*SASPPG
Trigger: ACCTGGTGGGCTGGCAGAGCATAAGTACATCCAGGT...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR GCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGACCTGGATGTACTTATaGTCTGCCAGCCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQTWMYL*SASPPG
Trigger: ACCTGGTGGGCTGGCAGAGCATAAGTACATCCAGGT...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR GCA 90 bp TTTCTACTTATTTCTCACCACACTTGTCAGTTAAGCAGCAGGATATCTGCAGGCGGTAGGGTGTGCATATaGCCTTTCTTTTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: FLLISHHTCQLSSRISAGGRVCI*PFFWLK
Trigger: TTTGAGCCAAAAGAAAGGGCATATGCACACCCTACC...GCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAGAAATAAGTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGAGCCCTCACAGTCACTaGAGAATGTGTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGSPHSH*RMCGLG
Trigger: TCCCAGGCCACACATTCTGCAGTGACTGTGAGGGCT...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp ATGCACATCAATGATAGACTGGATAAAGGAAATGTGGTACATATACACCGTGGAGCAGGGTGGGGGTCTTaGTTTTTGGATATTCCTCAC +
Preference number: 4 (lower is better)
Translates to: MHINDRLDKGNVVHIHRGAGWGS*FLDIPH
Trigger: GTGAGGAATATCCAAAAAGCAAGACCCCCACCCTGC...TCCACGGTGTATATGTACCACATTTCCTTTATCCAGTCTATCATTGATGTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR CCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCAAGAGTTTGCAGGTGTaGAAAGGAGGAGGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFKSLQV*KGGGGR
Trigger: CCTACCCCCTCCTCCTTTCCACACCTGCAAACTCTT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CCA 90 bp AATCATCTGGTTCAGTCCATTGAAAGTAACTTTTCGCACTTTGGTGATCTCATTAAGAGTTTGCAGGTGTaGAAAGGAGGAGGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: NHLVQSIESNFSHFGDLIKSLQV*KGGGGR
Trigger: CCTACCCCCTCCTCCTTTCCACACCTGCAAACTCTT...AATGAGATCACCAAAGTGCGAAAAGTTACTTTCAATGGACTGAACCAGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGAAGAGTTTGCAGGTGTaGAAAGGAGGAGGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQKSLQV*KGGGGR
Trigger: CCTACCCCCTCCTCCTTTCCACACCTGCAAACTCTT...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGGTCATCAGGAACTTCTaGGCCTATCCCAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTEVIRNF*AYPRSL
Trigger: GAGGCTTCTGGGATAGGCCCAGAAGTTCCTGATGAC...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CCA 90 bp CCATTGTCAACAGCAGAGATGCTGTTGAAACTCAATCCCAACTTAGCCAAATTACCCAAATCAGAACACTaGACCACTCGAAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: PLSTAEMLLKLNPNLAKLPKSEH*TTRRWH
Trigger: ATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGG...TAATTTGGCTAAGTTGGGATTGAGTTTCAACAGCATCTCTGCTGTTGACAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CCA 90 bp TCCAAAATGGTCTTCCCCTCTTTAGATTTCTACTTATTTCTCACCACACTTGTCAGGGGGAAGATCCTTTaGCACTTTGTCCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: SKMVFPSLDFYLFLTTLVRGKIL*HFVQTQ
Trigger: TTGGGTCTGGACAAAGTGCCAAAGGATCTTCCCCCT...GACAAGTGTGGTGAGAAATAAGTAGAAATCTAAAGAGGGGAAGACCATTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTTCTATGACAATCATCTaGTTCAGTCCATTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWISMTII*FSPLKV
Trigger: TACTTTCAATGGACTGAACCAGATGATTGTCATAGA...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp TTTGGTGATCTCATTCTCATGGGCACGCAGCTCCTGAAGAGTTTTGGGCATTTTAGCTTCTTCATTCCCTaGAAAGCCCCATTTTCAATT +
Preference number: 4 (lower is better)
Translates to: FGDLILMGTQLLKSFGHFSFFIP*KAPFSI
Trigger: AATTGAAAATGGGGCTTTCCAGGGAATGAAGAAGCT...AAAATGCCCAAAACTCTTCAGGAGCTGCGTGCCCATGAGAATGAGATCACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CCA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAGTTTCCGAGTTGAATaGCAGAGCGCACGTAGACAC +
Preference number: 4 (lower is better)
Translates to: ACIEFTHSNEALPVMMGISFRVE*QSARRH
Trigger: GTGTCTACGTGCGCTCTGCCATTCAACTCGGAAACT...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR CCA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGAAGCCACCCAGTTTTTaGTACTTTATTATAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKKPPSF*YFIIAA
Trigger: AGCTGCTATAATAAAGTACCAAAAACTGGGTGGCTT...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTCTGGTTATCTTATACTaGGGTAGGGTGTGCATATGC +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSLVILY*GRVCIC
Trigger: GCATATGCACACCCTACCCCAGTATAAGATAACCAG...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTTTAATTGTCATGTCCTaGAATGTCTCCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSLIVMS*NVSSCC
Trigger: GCAGCAGGAGGAGACATTCCAGGACATGACAATTAA...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp GGTTTTACAGTTGTCCTTAAAGGGAAGGAGCAAGGATGCACTGAGAAATCACTTTCCAAATCAGAACACTaGACCACTCGAAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: GFTVVLKGKEQGCTEKSLSKSEH*TTRRWH
Trigger: ATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGA...AAGTGATTTCTCAGTGCATCCTTGCTCCTTCCCTTTAAGGACAACTGTAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
3UTR CAA 72 bp TATTATCTCTTCTTGCTCACTTTACTCTGCTCACGTTaGTCCTCTCTGCTCTTGTTGGAACGTGCCATGTAT +
Preference number: 4 (lower is better)
Translates to: YYLFLLTLLCSR*SSLLLLERAMY
Trigger: ATACATGGCACGTTCCAACAAGAGCAGAGAGGACAAACGTGAGCAGAGTAAAGTGAGCAAGAAGAGATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
3UTR CAA 72 bp TTGGCCAGAGAGCCATTGTCAACAGCAGAGATGCTGTaGAAACTCAATCCCAACTTAGCCAAATTATTCAGT +
Preference number: 4 (lower is better)
Translates to: LAREPLSTAEML*KLNPNLAKLFS
Trigger: ACTGAATAATTTGGCTAAGTTGGGATTGAGTTTCAACAGCATCTCTGCTGTTGACAATGGCTCTCTGGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR CAA 72 bp CCTTTTTGGTGTTGTGTCCAGGTGGGCAGAAGTCACTaGATCCAACTACAGAGATATTGTTGTTATGAAGGT +
Preference number: 4 (lower is better)
Translates to: PFWCCVQVGRSH*IQLQRYCCYEG
Trigger: ACCTTCATAACAACAATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCACCTGGACACAACACCAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393155.6
3UTR CAA 72 bp AAAGGGAAGGAGCAAGGATGCACTGAGAAATCACTTTaGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KGKEQGCTEKSL*FLNQACSLLFA
Trigger: TGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCTCAGTGCATCCTTGCTCCTTCCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR TCA 90 bp ATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTACAAATAAGCCTCTCTGTTaGAACGGTCCAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ISSLDQSGNVCFVLYKLTNKPLC*NGPAQE
Trigger: TTCCTGGGCTGGACCGTTTCAACAGAGAGGCTTATT...TGTAAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR TCA 90 bp AATCATCTGGTTCAGTCCATTGAAAGTAACTTTTCGCACTTTGGTGATCTCATTTGGGCACGCAGCTCCTaGAGAGTTTTGGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: NHLVQSIESNFSHFGDLIWARSS*RVLGIF
Trigger: AAAAATGCCCAAAACTCTTCAGGAGCTGCGTGCCCA...AATGAGATCACCAAAGTGCGAAAAGTTACTTTCAATGGACTGAACCAGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCTGGGCACGCAGCTCCTaGAGAGTTTTGGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFWARSS*RVLGIF
Trigger: AAAAATGCCCAAAACTCTTCAGGAGCTGCGTGCCCA...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR TCA 90 bp GCTGCATCAACTCTGCTGATTTTGTTGCCATCAAGATGTAATTCCGTAAGGGAATGGGCAGAAGTCACTTaGTCCAACTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: AASTLLILLPSRCNSVREWAEVT*SNYRDI
Trigger: AATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCA...TTCCCTTACGGAATTACATCTTGATGGCAACAAAATCAGCAGAGTTGATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR TCA 90 bp ATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTACAGCACGTAGACACATCTaGAGGTGGATGGCTGTATCT +
Preference number: 4 (lower is better)
Translates to: ISSLDQSGNVCFVLYKLTARRHI*RWMAVS
Trigger: AGATACAGCCATCCACCTTCAGATGTGTCTACGTGC...TGTAAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR TCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGGCACGTAGACACATCTaGAGGTGGATGGCTGTATCT +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTEARRHI*RWMAVS
Trigger: AGATACAGCCATCCACCTTCAGATGTGTCTACGTGC...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCGCACGTAGACACATCTaGAGGTGGATGGCTGTATCT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFARRHI*RWMAVS
Trigger: AGATACAGCCATCCACCTTCAGATGTGTCTACGTGC...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR TCA 90 bp TGGCAATTCCTTCAGCTGATTCTTGGACAGATAAAGTCGTTCCAACTTCACCAAAGCAGAGGGGTAAATTaGAACATCAGTTCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: WQFLQLILGQIKSFQLHQSRGVN*NISSLD
Trigger: GTCTAGAGAACTGATGTTTCAATTTACCCCTCTGCT...TTGGTGAAGTTGGAACGACTTTATCTGTCCAAGAATCAGCTGAAGGAATTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR TCA 90 bp AACATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTTTGAAGGCTACAACATaGAGGGTGCGTCACTCAAGG +
Preference number: 4 (lower is better)
Translates to: NISSLDQSGNVCFVLYKLLKATT*RVRHSR
Trigger: CCTTGAGTGACGCACCCTTCATGTTGTAGCCTTCAA...AAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp GAGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCGGAGCAAGGATGCACTaGGAAATCACTTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: EKSLLFLNQACSLLFAACGARMH*EITFVS
Trigger: AGAAACAAAAGTGATTTCTCAGTGCATCCTTGCTCC...GCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR GCA 90 bp GTCATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGATTTAATCCGGGAATTTaGCACAGGAGCCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: VISVLIKKDHNLYSGISRFNPGI*HRSPQS
Trigger: GCTTTGAGGGCTCCTGTGGCAAATTCCCGGATTAAA...TCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp TCTGTATTCAACTTCATAATTGGGACATTGGTGGTGTACTTCAGTTTTTGGGCATTTAATCCGGGAATTTaGCACAGGAGCCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVFNFIIGTLVVYFSFWAFNPGI*HRSPQS
Trigger: GCTTTGAGGGCTCCTGTGGCAAATTCCCGGATTAAA...TGCCCAAAAACTGAAGTACACCACCAATGTCCCAATTATGAAGTTGAATACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546745.5
CDS-3UTR GCA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAGCCCAGGAAACTTGTaGAAGCAGAAGGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: ACIEFTHSNEALPVMMGISPGNL*KQKEDD
Trigger: ATCATCCTCCTTCTGCTTGCACAAGTTTCCTGGGCT...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR GCA 90 bp CTGCTACTATTAGCAGAATTGATTACCTCTCATGTGAGCCACTACTATAACTTGGTCTTGGACTGGGACTaGCTGGAACATTGGATGAAT +
Preference number: 4 (lower is better)
Translates to: LLLLAELITSHVSHYYNLVLDWD*LEHWMN
Trigger: ATTCATCCAATGTTCCAGGCAGTCCCAGTCCAAGAC...CAAGTTATAGTAGTGGCTCACATGAGAGGTAATCAATTCTGCTAATAGTAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp CTGCTACTATTAGCAGAATTGATTACCTCTCATGTGAGCCACTACTATAACTTGTACTGGGGTAGGGTGTaGATATGCCCTTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LLLLAELITSHVSHYYNLYWGRV*ICPFFW
Trigger: CCAAAAGAAAGGGCATATGCACACCCTACCCCAGTA...CAAGTTATAGTAGTGGCTCACATGAGAGGTAATCAATTCTGCTAATAGTAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp ACTAAAACAGTCCATGCATTTTTCCAGAGGCATCAAATTATCCTGCAGAGTAATTTTCTCCCTCTTCTCTaGTCCCAAAGCACGTTGCTC +
Preference number: 4 (lower is better)
Translates to: TKTVHAFFQRHQIILQSNFLPLL*SQSTLL
Trigger: GAGCAACGTGCTTTGGGAGCAGAGAAGAGGGAGAAA...ATTACTCTGCAGGATAATTTGATGCCTCTGGAAAAATGCATGGACTGTTTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTTCTCCCTCTTCTCTaGTCCCAAAGCACGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQFLPLL*SQSTLL
Trigger: GAGCAACGTGCTTTGGGAGCAGAGAAGAGGGAGAAA...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552962.5
CDS-3UTR GCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGATCCAGGCAAGATGCTaGTTTCTCCCTCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQIQARC*FLPLLC
Trigger: GCAGAGAAGAGGGAGAAAGCAGCATCTTGCCTGGAT...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552962.5
CDS-3UTR GCA 90 bp TTTCTGGGTTCCTATAGGCAGTTTATTCCAATTGTAGAAGTTGCATTTTTCTTCCATCCTTTCTCCCCATaGCTAGAGCAGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: FLGSYRQFIPIVEVAFFFHPFSP*LEQSSS
Trigger: GGATGAGCTCTGCTCTAGGCATGGGGAGAAAGGATG...GAAGAAAAATGCAACTTCTACAATTGGAATAAACTGCCTATAGGAACCCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp AGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCTGGGAAGGAGCAAGGATaGACTGAGAAATCACTTTTG +
Preference number: 4 (lower is better)
Translates to: RNHFCFSIRHVPFSLQLAGKEQG*TEKSLL
Trigger: CAAAAGTGATTTCTCAGTGCATCCTTGCTCCTTCCC...AGCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR CCA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGGTCATCAGGAACTTCTaGGCCTATCCCAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGVIRNF*AYPRSL
Trigger: GAGGCTTCTGGGATAGGCCCAGAAGTTCCTGATGAC...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCAGGGGGAAGATCCTTTaGCACTTTGTCCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFRGKIL*HFVQTQ
Trigger: TTGGGTCTGGACAAAGTGCCAAAGGATCTTCCCCCT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000552962.5
CDS-3UTR CCA 90 bp AAATGCACATCAATGATAGACTGGATAAAGGAAATGTGGTACATATACACCGTGTCAGATGAGGCGTGTTaGCCAGAGAGCCATTGTCAA +
Preference number: 4 (lower is better)
Translates to: KCTSMIDWIKEMWYIYTVSDEAC*PESHCQ
Trigger: TTGACAATGGCTCTCTGGCCAACACGCCTCATCTGA...CACGGTGTATATGTACCACATTTCCTTTATCCAGTCTATCATTGATGTGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR CCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCTCAGATGAGGCGTGTTaGCCAGAGAGCCATTGTCAA +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFSDEAC*PESHCQ
Trigger: TTGACAATGGCTCTCTGGCCAACACGCCTCATCTGA...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CCA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTACATCTGAAGGTGGATaGCTGTATCTCCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: ACIEFTHSNEALPVMMGITSEGG*LYLPVL
Trigger: CAGTACTGGGAGATACAGCCATCCACCTTCAGATGT...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR CCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGAGTTTCCGAGTTGAATaGCAGAGCGCACGTAGACAC +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTESFRVE*QSARRH
Trigger: GTGTCTACGTGCGCTCTGCCATTCAACTCGGAAACT...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR CCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCAGTTTCCGAGTTGAATaGCAGAGCGCACGTAGACAC +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFSFRVE*QSARRH
Trigger: GTGTCTACGTGCGCTCTGCCATTCAACTCGGAAACT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CCA 90 bp ACCGAGACCCCTCTAATAGCTCTCTGTCTTACTCAGAGTAAAAGCTCATCTTTATCCCAGCATACGTCTTaGATTTTGAACTTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: TETPLIALCLTQSKSSSLSQHTS*ILNLVP
Trigger: AGGGACTAAGTTCAAAATCCAAGACGTATGCTGGGA...TAAAGATGAGCTTTTACTCTGAGTAAGACAGAGAGCTATTAGAGGGGTCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTTCATTCAGCCATCCCTaGCCTCTCTACCATCAAAAC +
Preference number: 4 (lower is better)
Translates to: ACIEFTHSNEALPVMMGISFSHP*PLYHQN
Trigger: GTTTTGATGGTAGAGAGGCCAGGGATGGCTGAATGA...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp ATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTACACTTTTCGCACTTTGGTaGTCTCATTCTCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: ISSLDQSGNVCFVLYKLTLFALW*SHSHGH
Trigger: GTGCCCATGAGAATGAGATCACCAAAGTGCGAAAAG...TGTAAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000393155.6
CDS-3UTR TCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGCTTTTCGCACTTTGGTaGTCTCATTCTCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQLFALW*SHSHGH
Trigger: GTGCCCATGAGAATGAGATCACCAAAGTGCGAAAAG...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR TCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTGGTGCCCAGTTCTATaGCAATCATCTGGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQWCPVL*QSSGSV
Trigger: GACTGAACCAGATGATTGTCATAGAACTGGGCACCA...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCCCCATTTTCAATTCCTaGGCTCTTCAGCGGATTGGT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFPIFNS*ALQRIG
Trigger: ACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGG...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR TCA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTCTTGAGGAATGCTGGTaGTATTGGTATCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: ACIEFTHSNEALPVMMGILEECW*YWYQQC
Trigger: GCATTGCTGATACCAATATCACCAGCATTCCTCAAG...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000393155.6
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCGAAGGAGGAAGACCTTaGGGAATGCTGGTGATATTG +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFEGGRP*GMLVIL
Trigger: CAATATCACCAGCATTCCTCAAGGTCTTCCTCCTTC...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR TCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTTTAAAGGCTATAGCATaGAGGGTGCATTATTCATGG +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSLKAIA*RVHYSW
Trigger: CCATGAATAATGCACCCTTCATGCTATAGCCTTTAA...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTTCTCCAATGCCTAAGTaGTTGATGGCAGTCATAATA +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSSPMPK*LMAVII
Trigger: TATTATGACTGCCATCAATCACTTAGGCATTGGAGA...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp CCTGGTTTTACAGTTGTCCTTAAAGGGAAGGAGCAAGGATGCACTGAGAAATCAGTTGTAAAGATTAAATaGGATAGTGGGCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGFTVVLKGKEQGCTEKSVVKIK*DSGLLF
Trigger: GAAGAGAAGCCCACTATCTCATTTAATCTTTACAAC...TGATTTCTCAGTGCATCCTTGCTCCTTCCCTTTAAGGACAACTGTAAAACCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550099.5
CDS-3UTR TCA 90 bp TTTCTGCAGATGGAGATGTCAAGGCTCTCAACAGCTTGCCAGCATCATAAAGTAGTTGTAAAGATTAAATaGGATAGTGGGCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: FLQMEMSRLSTACQHHKVVVKIK*DSGLLF
Trigger: GAAGAGAAGCCCACTATCTCATTTAATCTTTACAAC...TACTTTATGATGCTGGCAAGCTGTTGAGAGCCTTGACATCTCCATCTGCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR TCA 90 bp TTTCTGGGTTCCTATAGGCAGTTTATTCCAATTGTAGAAGTTGCATTTTTCTTCCTTTGGCCCATCCACTaGGCTTCAATCTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: FLGSYRQFIPIVEVAFFFLWPIH*ASIFLE
Trigger: CTCCAGAAAGATTGAAGCTCAGTGGATGGGCCAAAG...GAAGAAAAATGCAACTTCTACAATTGGAATAAACTGCCTATAGGAACCCAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR TCA 90 bp TTTCTGCAGATGGAGATGTCAAGGCTCTCAACAGCTTGCCAGCATCATAAAGTATCCCGATATAGCTTCTaGATGACTGAACAAATAGAT +
Preference number: 4 (lower is better)
Translates to: FLQMEMSRLSTACQHHKVSRYSF*MTEQID
Trigger: ATCTATTTGTTCAGTCATTCAGAAGCTATATCGGGA...TACTTTATGATGCTGGCAAGCTGTTGAGAGCCTTGACATCTCCATCTGCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR TCA 90 bp TTTCTGCAGATGGAGATGTCAAGGCTCTCAACAGCTTGCCAGCATCATAAAGTATTGCAACAAGTTCAATaGAACAACTTGGCCAATATC +
Preference number: 4 (lower is better)
Translates to: FLQMEMSRLSTACQHHKVLQQVQ*NNLANI
Trigger: GATATTGGCCAAGTTGTTTCATTGAACTTGTTGCAA...TACTTTATGATGCTGGCAAGCTGTTGAGAGCCTTGACATCTCCATCTGCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR TCA 90 bp AGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCTGGAGCAAGGATGCACTaGGAAATCACTTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RNHFCFSIRHVPFSLQLAGARMH*EITFVS
Trigger: AGAAACAAAAGTGATTTCTCAGTGCATCCTTGCTCC...AGCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR GCA 90 bp GTCATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAAGGTTGAAAACCTCCTaGTTCTACTCCATAGCACAG +
Preference number: 4 (lower is better)
Translates to: VISVLIKKDHNLYSGISRRLKTS*FYSIAQ
Trigger: CTGTGCTATGGAGTAGAAGCAGGAGGTTTTCAACCT...TCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTTAATCCGGGAATTTaGCACAGGAGCCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQFNPGI*HRSPQS
Trigger: GCTTTGAGGGCTCCTGTGGCAAATTCCCGGATTAAA...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR GCA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGAAGCCCAGGAAACTTGTaGAAGCAGAAGGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRSPGNL*KQKEDD
Trigger: ATCATCCTCCTTCTGCTTGCACAAGTTTCCTGGGCT...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGAGCCCAGGAAACTTGTaGAAGCAGAAGGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQSPGNL*KQKEDD
Trigger: ATCATCCTCCTTCTGCTTGCACAAGTTTCCTGGGCT...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR GCA 90 bp TTCCTGGAAGTTTGTTTGAAATGCAGAATCTCAGACCTCGATCCAGAACTGACAGTTGACAAGAATCAATaGGTGAAGGTTCTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: FLEVCLKCRISDLDPELTVDKNQ*VKVLQV
Trigger: AACCTGAAGAACCTTCACGCATTGATTCTTGTCAAC...TGTCAGTTCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp ACCGAGACCCCTCTAATAGCTCTCTGTCTTACTCAGAGTAAAAGCTCATCTTTAGCTCTTGAACTATTATaGATCTATGGAAACCCACCT +
Preference number: 4 (lower is better)
Translates to: TETPLIALCLTQSKSSSLALELL*IYGNPP
Trigger: AGGTGGGTTTCCATAGATGCATAATAGTTCAAGAGC...TAAAGATGAGCTTTTACTCTGAGTAAGACAGAGAGCTATTAGAGGGGTCTCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp GTCATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAATTAAGCCTCCTTTATaGCAACCTGTCAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VISVLIKKDHNLYSGISRIKPPL*QPVRGV
Trigger: CACACCTCTGACAGGTTGGCATAAAGGAGGCTTAAT...TCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCCCCAAATCAGAACACTaGACCACTCGAAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFPKSEH*TTRRWH
Trigger: ATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGG...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGCCCAAATCAGAACACTaGACCACTCGAAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQPKSEH*TTRRWH
Trigger: ATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGG...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CCA 90 bp ATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAATTTCAGATGAGGCGTGTTaGCCAGAGAGCCATTGTCAA +
Preference number: 4 (lower is better)
Translates to: ISVLIKKDHNLYSGISRISDEAC*PESHCQ
Trigger: TTGACAATGGCTCTCTGGCCAACACGCCTCATCTGA...AATTCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGTCAGATGAGGCGTGTTaGCCAGAGAGCCATTGTCAA +
Preference number: 4 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGSDEAC*PESHCQ
Trigger: TTGACAATGGCTCTCTGGCCAACACGCCTCATCTGA...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGTGTATCTCCCAGTACTaGACCGGGTTGCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTECISQY*TGLLKR
Trigger: TCTTTTCAGCAACCCGGTCCAGTACTGGGAGATACA...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR CCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCTGTATCTCCCAGTACTaGACCGGGTTGCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFCISQY*TGLLKR
Trigger: TCTTTTCAGCAACCCGGTCCAGTACTGGGAGATACA...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGACATCTGAAGGTGGATaGCTGTATCTCCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTETSEGG*LYLPVL
Trigger: CAGTACTGGGAGATACAGCCATCCACCTTCAGATGT...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR CCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGACATCTGAAGGTGGATaGCTGTATCTCCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQTSEGG*LYLPVL
Trigger: CAGTACTGGGAGATACAGCCATCCACCTTCAGATGT...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCTTGTTCCTGATGGCCTaGAAGCATTCATTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFLFLMA*KHSFSP
Trigger: AGGGCTGAATGAATGCTTCCAGGCCATCAGGAACAA...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGCTTGAGGAATGCTGGTaGTATTGGTATCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQLEECW*YWYQQC
Trigger: GCATTGCTGATACCAATATCACCAGCATTCCTCAAG...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR TCA 90 bp CTGCTACTATTAGCAGAATTGATTACCTCTCATGTGAGCCACTACTATAACTTGACCTCGATCCAGAACTaGCACATAAGAATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLLLAELITSHVSHYYNLTSIQN*HIRISL
Trigger: AAGGGAAATTCTTATGTGTCAGTTCTGGATCGAGGT...CAAGTTATAGTAGTGGCTCACATGAGAGGTAATCAATTCTGCTAATAGTAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp TCCAAAATGGTCTTCCCCTCTTTAGATTTCTACTTATTTCTCACCACACTTGTCTCCTGGAAGTTTGTTTaGAATGCAGAATCTCAGACC +
Preference number: 4 (lower is better)
Translates to: SKMVFPSLDFYLFLTTLVSWKFV*NAESQT
Trigger: GGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGA...GACAAGTGTGGTGAGAAATAAGTAGAAATCTAAAGAGGGGAAGACCATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCCCTCTCAAAGACAGTTaGATCAAGTCACTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFPLKDS*IKSLLY
Trigger: GTAGAGGAGTGACTTGATTCAACTGTCTTTGAGAGG...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTCCAGGCCAAAATTCCTaGAGTCATCTCTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ACIEFTHSNEALPVMMGIPGQNS*SHLCFF
Trigger: AAAGAAACAGAGATGACTTCAGGAATTTTGGCCTGG...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp CTGCTACTATTAGCAGAATTGATTACCTCTCATGTGAGCCACTACTATAACTTGGATCTAAATCCTCCTTaGCACCTCCATATGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLLLAELITSHVSHYYNLDLNPP*HLHMEV
Trigger: AACTTCCATATGGAGGTGTCAAGGAGGATTTAGATC...CAAGTTATAGTAGTGGCTCACATGAGAGGTAATCAATTCTGCTAATAGTAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGAGGTTGAAAACCTCCTaGTTCTACTCCATAGCACAG +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQRLKTS*FYSIAQ
Trigger: CTGTGCTATGGAGTAGAAGCAGGAGGTTTTCAACCT...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR GCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCAGGTTGAAAACCTCCTaGTTCTACTCCATAGCACAG +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFRLKTS*FYSIAQ
Trigger: CTGTGCTATGGAGTAGAAGCAGGAGGTTTTCAACCT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR GCA 90 bp ATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTACACAACAGAGAGAAGGATaGATCATTCAAGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ISSLDQSGNVCFVLYKLTQQREG*IIQGPA
Trigger: AGCTGGACCTTGAATGATGCATCCTTCTCTCTGTTG...TGTAAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp CTTGGACAGATAAAGTCGTTCCAACTTCACCAAAGGTGTAAATGCTCCAGGACTATTCTAAACTGCTTATaGAGTATAGTGGAGCAACTT +
Preference number: 4 (lower is better)
Translates to: LGQIKSFQLHQRCKCSRTILNCL*SIVEQL
Trigger: AAGTTGCTCCACTATACTGCATAAGCAGTTTAGAAT...AGTCCTGGAGCATTTACACCTTTGGTGAAGTTGGAACGACTTTATCTGTCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR GCA 90 bp AAAATACCTTGCATGAGACCACTGCTCATTGGAACTTACTTAGTTCCCTTAGTTCCATTGGAATTATCCTaGGGCCTTTTGAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KIPCMRPLLIGTYLVPLVPLELS*GLLKVF
Trigger: GAAGACTTTCAAAAGGCCGCAGGATAATTCCAATGG...AACTAAGGGAACTAAGTAAGTTCCAATGAGCAGTGGTCTCATGCAAGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp GAGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCTCAAGAACCAAGCCATaGATATGTTCGTGTATTCAT +
Preference number: 4 (lower is better)
Translates to: EKSLLFLNQACSLLFAACSRTKP*ICSCIH
Trigger: ATGAATACACGAACATATGCATGGCTTGGTTCTTGA...GCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR GCA 90 bp GCATTAATTCAAGAACCAAGCCATGCATATGTTCGTGTATTCATTCATCAATCGGGGAAGGAGCAAGGATaGACTGAGAAATCACTTTTG +
Preference number: 4 (lower is better)
Translates to: ALIQEPSHAYVRVFIHQSGKEQG*TEKSLL
Trigger: CAAAAGTGATTTCTCAGTGCATCCTTGCTCCTTCCC...CGATTGATGAATGAATACACGAACATATGCATGGCTTGGTTCTTGAATTAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR CCA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGCCCAAATCAGAACACTaGACCACTCGAAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGPKSEH*TTRRWH
Trigger: ATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGG...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CCA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGTGTATCTCCCAGTACTaGACCGGGTTGCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGCISQY*TGLLKR
Trigger: TCTTTTCAGCAACCCGGTCCAGTACTGGGAGATACA...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTCGAAATATTCTCTCTTaGCCTATTCCTGTTACCTTA +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSRNILS*PIPVTL
Trigger: TAAGGTAACAGGAATAGGCCAAGAGAGAATATTTCG...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTTGCAAAAGGCCAAATTaGCCCTGTAAAATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: ACIEFTHSNEALPVMMGICKRPN*PCKMCC
Trigger: GCAACACATTTTACAGGGCCAATTTGGCCTTTTGCA...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp ACTAAAACAGTCCATGCATTTTTCCAGAGGCATCAAATTATCCTGCAGAGTAATTCCAAATCAGAACACTaGACCACTCGAAGATGGCAT +
Preference number: 4 (lower is better)
Translates to: TKTVHAFFQRHQIILQSNSKSEH*TTRRWH
Trigger: ATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGA...ATTACTCTGCAGGATAATTTGATGCCTCTGGAAAAATGCATGGACTGTTTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR CCA 90 bp AAATGCACATCAATGATAGACTGGATAAAGGAAATGTGGTACATATACACCGTGTCCTCACATAAGCAGTaGCTTTGCATTACCTGGATG +
Preference number: 4 (lower is better)
Translates to: KCTSMIDWIKEMWYIYTVSSHKQ*LCITWM
Trigger: CATCCAGGTAATGCAAAGCCACTGCTTATGTGAGGA...CACGGTGTATATGTACCACATTTCCTTTATCCAGTCTATCATTGATGTGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR TCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGTGGGCAGAAGTCACTTaGTCCAACTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTEWAEVT*SNYRDI
Trigger: AATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCA...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCTGGGCAGAAGTCACTTaGTCCAACTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFWAEVT*SNYRDI
Trigger: AATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCA...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR TCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTGGGCAGAAGTCACTTaGTCCAACTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQWAEVT*SNYRDI
Trigger: AATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCA...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCAGCAGAGGGGTAAATTaGAACATCAGTTCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFSRGVN*NISSLD
Trigger: GTCTAGAGAACTGATGTTTCAATTTACCCCTCTGCT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR TCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGAGCAGAGGGGTAAATTaGAACATCAGTTCTCTAGAC +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQSRGVN*NISSLD
Trigger: GTCTAGAGAACTGATGTTTCAATTTACCCCTCTGCT...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR TCA 90 bp GTCATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGATGCACCTTGAATTCCTaGATGTCTTCCAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: VISVLIKKDHNLYSGISRCTLNS*MSSNRN
Trigger: GTTTCTATTGGAAGACATTCAGGAATTCAAGGTGCA...TCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp AACATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTTATGGACATGCACCTTaGATTCCTGAATGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NISSLDQSGNVCFVLYKLYGHAP*IPECLP
Trigger: TGGAAGACATTCAGGAATTCAAGGTGCATGTCCATA...AAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp AGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCTTCATCAATCGTTCAGTaGTGTGTAAAGAGTCTACAA +
Preference number: 4 (lower is better)
Translates to: RNHFCFSIRHVPFSLQLASSIVQ*CVKSLQ
Trigger: TTGTAGACTCTTTACACATCACTGAACGATTGATGA...AGCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR GCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGTCCTTTCAGGCTAGCTaGATCAACTCTGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTESFQAS*INSADF
Trigger: AAAATCAGCAGAGTTGATGCAGCTAGCCTGAAAGGA...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR GCA 90 bp AACATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTTCCTTTCAGGCTAGCTaGATCAACTCTGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: NISSLDQSGNVCFVLYKLSFQAS*INSADF
Trigger: AAAATCAGCAGAGTTGATGCAGCTAGCCTGAAAGGA...AAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR GCA 90 bp AAATGCACATCAATGATAGACTGGATAAAGGAAATGTGGTACATATACACCGTGTCCTTTCAGGCTAGCTaGATCAACTCTGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: KCTSMIDWIKEMWYIYTVSFQAS*INSADF
Trigger: AAAATCAGCAGAGTTGATGCAGCTAGCCTGAAAGGA...CACGGTGTATATGTACCACATTTCCTTTATCCAGTCTATCATTGATGTGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR GCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCTCCTTTCAGGCTAGCTaGATCAACTCTGCTGATTTT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFSFQAS*INSADF
Trigger: AAAATCAGCAGAGTTGATGCAGCTAGCCTGAAAGGA...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR GCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCAAAGTGTGTTGGATCTaGCTTGCAGATAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFKVCWI*LADKCP
Trigger: TGGACACTTATCTGCAAGGCAGATCCAACACACTTT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTATGATATCCTGCAGCTaGCTCTGCAATAAAATTGTG +
Preference number: 4 (lower is better)
Translates to: ACIEFTHSNEALPVMMGIMISCS*LCNKIV
Trigger: CACAATTTTATTGCAGAGGCAGCTGCAGGATATCAT...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTCATGTACAGTATGATTaGTTAGTTTGGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSHVQYD*LVWTKS
Trigger: TGACTTTGTCCAAACTAAGCAATCATACTGTACATG...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp GCTGCATCAACTCTGCTGATTTTGTTGCCATCAAGATGTAATTCCGTAAGGGAACTTAAGATTCTAAACTaGTTATGCAGTATAGTGGAG +
Preference number: 4 (lower is better)
Translates to: AASTLLILLPSRCNSVRELKILN*LCSIVE
Trigger: CTCCACTATACTGCATAAGCAGTTTAGAATCTTAAG...TTCCCTTACGGAATTACATCTTGATGGCAACAAAATCAGCAGAGTTGATGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR GCA 90 bp TCCAATTACAAGGTAAGTTGCAACAAGTTCAATGAAACAACTTGGCCAATATCTAGGCTCTCAACAGCTTaGCAGCATCATAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SNYKVSCNKFNETTWPISRLSTA*QHHKVR
Trigger: CCTTACTTTATGATGCTGGCAAGCTGTTGAGAGCCT...AGATATTGGCCAAGTTGTTTCATTGAACTTGTTGCAACTTACCTTGTAATTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp AAAATACCTTGCATGAGACCACTGCTCATTGGAACTTACTTAGTTCCCTTAGTTATTGTAGCTTCTCTCTaGTCATTAAGTGTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KIPCMRPLLIGTYLVPLVIVASL*SLSVCQ
Trigger: TTGGCAGACACTTAATGAGCAGAGAGAAGCTACAAT...AACTAAGGGAACTAAGTAAGTTCCAATGAGCAGTGGTCTCATGCAAGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp AACCAAATACTGCATGTTCTCACGCATAAATGGAAGTTGAATGCTGAGAACACACATAAGCAGTGGCTTTaGATTACCTGGATGTACTTA +
Preference number: 4 (lower is better)
Translates to: NQILHVLTHKWKLNAENTHKQWL*ITWMYL
Trigger: TAAGTACATCCAGGTAATGCAAAGCCACTGCTTATG...TGTGTTCTCAGCATTCAACTTCCATTTATGCGTGAGAACATGCAGTATTTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR GCA 90 bp AACCAAATACTGCATGTTCTCACGCATAAATGGAAGTTGAATGCTGAGAACACATGGAACCAATCCAAATaGACATCAATGATAGACTGG +
Preference number: 4 (lower is better)
Translates to: NQILHVLTHKWKLNAENTWNQSK*TSMIDW
Trigger: CCAGTCTATCATTGATGTGCATTTGGATTGGTTCCA...TGTGTTCTCAGCATTCAACTTCCATTTATGCGTGAGAACATGCAGTATTTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR CCA 90 bp CTGCTACTATTAGCAGAATTGATTACCTCTCATGTGAGCCACTACTATAACTTGAGCTTCTTCATTCCCTaGAAAGCCCCATTTTCAATT +
Preference number: 4 (lower is better)
Translates to: LLLLAELITSHVSHYYNLSFFIP*KAPFSI
Trigger: AATTGAAAATGGGGCTTTCCAGGGAATGAAGAAGCT...CAAGTTATAGTAGTGGCTCACATGAGAGGTAATCAATTCTGCTAATAGTAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp GCTGCATCAACTCTGCTGATTTTGTTGCCATCAAGATGTAATTCCGTAAGGGAATACAGAGCTAGTGTTTaGCATTTGACTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: AASTLLILLPSRCNSVREYRASV*HLTLSQ
Trigger: TTGAGATAAAGTCAAATGCCAAACACTAGCTCTGTA...TTCCCTTACGGAATTACATCTTGATGGCAACAAAATCAGCAGAGTTGATGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CCA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGATTATTTCTCCAAGTGTaGACCAAGAAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRLFLQV*TKKQQH
Trigger: ATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAA...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp TTTCTACTTATTTCTCACCACACTTGTCAGTTAAGCAGCAGGATATCTGCAGGCCTTGGAAAAGCATTATaGAGAACGGTAAAGGAATAT +
Preference number: 4 (lower is better)
Translates to: FLLISHHTCQLSSRISAGLGKAL*RTVKEY
Trigger: ATATTCCTTTACCGTTCTCCATAATGCTTTTCCAAG...GCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAGAAATAAGTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp ACTAAAACAGTCCATGCATTTTTCCAGAGGCATCAAATTATCCTGCAGAGTAATGAGACCACTGCTCATTaGAACTTACTTAGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TKTVHAFFQRHQIILQSNETTAH*NLLSSL
Trigger: AAGGGAACTAAGTAAGTTCCAATGAGCAGTGGTCTC...ATTACTCTGCAGGATAATTTGATGCCTCTGGAAAAATGCATGGACTGTTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551354.1
3UTR CAA 72 bp ATGCTAGAAAATGTCAGCAATCTGGTAAACATCATGTaGGACAAAGGCCAGGTTGTCTTAAAACATCATGCT +
Preference number: 4 (lower is better)
Translates to: MLENVSNLVNIM*DKGQVVLKHHA
Trigger: AGCATGATGTTTTAAGACAACCTGGCCTTTGTCCAACATGATGTTTACCAGATTGCTGACATTTTCTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546745.5
CDS-3UTR TCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGAGGAGCCCTCAAAGCTaGGATGTAATTACACTAAAT +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTERSPQS*DVITLN
Trigger: ATTTAGTGTAATTACATCTCAGCTTTGAGGGCTCCT...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000393155.6
CDS-3UTR TCA 90 bp ATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTACAAGGAGCCCTCAAAGCTaGGATGTAATTACACTAAAT +
Preference number: 4 (lower is better)
Translates to: ISSLDQSGNVCFVLYKLTRSPQS*DVITLN
Trigger: ATTTAGTGTAATTACATCTCAGCTTTGAGGGCTCCT...TGTAAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000393155.6
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCAGGAGCCCTCAAAGCTaGGATGTAATTACACTAAAT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFRSPQS*DVITLN
Trigger: ATTTAGTGTAATTACATCTCAGCTTTGAGGGCTCCT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR TCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGTTCCAACCTTTTATGTaGAGCACCCATAATCGAACA +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTEFQPFM*STHNRT
Trigger: TGTTCGATTATGGGTGCTTCACATAAAAGGTTGGAA...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp GTCATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAATAAAGATAAGATTATaGTATCCTGCAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: VISVLIKKDHNLYSGISRIKIRL*YPAAAS
Trigger: AGAGGCAGCTGCAGGATATCATAATCTTATCTTTAT...TCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAATGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp ATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAATTTTCCCCAGTTCTGCTTaGCATTCCTCCACTTTAATT +
Preference number: 4 (lower is better)
Translates to: ISVLIKKDHNLYSGISRIFPSSA*HSSTLI
Trigger: AATTAAAGTGGAGGAATGTCAAGCAGAACTGGGGAA...AATTCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp TTTCTGGGTTCCTATAGGCAGTTTATTCCAATTGTAGAAGTTGCATTTTTCTTCTCAAAAGGAGGAATGTaGATGAGCTGCCATGTAAAC +
Preference number: 4 (lower is better)
Translates to: FLGSYRQFIPIVEVAFFFSKGGM*MSCHVN
Trigger: GTTTACATGGCAGCTCATTCACATTCCTCCTTTTGA...GAAGAAAAATGCAACTTCTACAATTGGAATAAACTGCCTATAGGAACCCAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR TCA 90 bp TTTCTGGGTTCCTATAGGCAGTTTATTCCAATTGTAGAAGTTGCATTTTTCTTCTGCATTTACAATGAATaGGGTGGTGCATTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FLGSYRQFIPIVEVAFFFCIYNE*GGAFLL
Trigger: CAGGAGAAATGCACCACCTCATTCATTGTAAATGCA...GAAGAAAAATGCAACTTCTACAATTGGAATAAACTGCCTATAGGAACCCAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGGTTGACAAGAATCAATaGGTGAAGGTTCTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQVDKNQ*VKVLQV
Trigger: AACCTGAAGAACCTTCACGCATTGATTCTTGTCAAC...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000552962.5
CDS-3UTR GCA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGACAGATTTTATGGTCCTaGAAGAATGTGGAAAGATGG +
Preference number: 4 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRQILWS*KNVERW
Trigger: CCATCTTTCCACATTCTTGCAGGACCATAAAATCTG...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp ATTGTCAACAGCAGAGATGCTGTTGAAACTCAATCCCAACTTAGCCAAATTATTGTTGACAAGAATCAATaGCCAAATCAGAACACTGGA +
Preference number: 4 (lower is better)
Translates to: IVNSRDAVETQSQLSQIIVDKNQ*PNQNTG
Trigger: TCCAGTGTTCTGATTTGGGCATTGATTCTTGTCAAC...AATAATTTGGCTAAGTTGGGATTGAGTTTCAACAGCATCTCTGCTGTTGACAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR GCA 90 bp ACTAAAACAGTCCATGCATTTTTCCAGAGGCATCAAATTATCCTGCAGAGTAATATAAGCATTAACATTTaGCATCCCCAACTGCATTGC +
Preference number: 4 (lower is better)
Translates to: TKTVHAFFQRHQIILQSNISINI*HPQLHC
Trigger: GCAATGCAGTTGGGGATGGCAAATGTTAATGCTTAT...ATTACTCTGCAGGATAATTTGATGCCTCTGGAAAAATGCATGGACTGTTTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR CCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCAGCTTCTTCATTCCCTaGAAAGCCCCATTTTCAATT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFSFFIP*KAPFSI
Trigger: AATTGAAAATGGGGCTTTCCAGGGAATGAAGAAGCT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CCA 90 bp ATGCACATCAATGATAGACTGGATAAAGGAAATGTGGTACATATACACCGTGGATGGATAAAGGAAATGTaGTACATATACACCGTGGAA +
Preference number: 4 (lower is better)
Translates to: MHINDRLDKGNVVHIHRGWIKEM*YIYTVE
Trigger: TTCCACGGTGTATATGTACCACATTTCCTTTATCCA...TCCACGGTGTATATGTACCACATTTCCTTTATCCAGTCTATCATTGATGTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR TCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTATGGACAAGGAAATaGGTCACAGAAAGGTTAACT +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQLWTRK*VTERLT
Trigger: AGTTAACCTTTCTGTGACTCATTTCCTTGTCCATAA...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp AACATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTTCTGTCACAGACCTGTaGTTTGAAATAATTGTGACA +
Preference number: 4 (lower is better)
Translates to: NISSLDQSGNVCFVLYKLSVTDL*FEIIVT
Trigger: TGTCACAATTATTTCAAATCACAGGTCTGTGACAGA...AAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp AACATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTCCTCCATATGGAAGTTaGATATGCATCTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: NISSLDQSGNVCFVLYKLPPYGS*ICISKR
Trigger: TCTTTTTGAGATGCATATTCAACTTCCATATGGAGG...AAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCGTTGTAAAGATTAAATaGGATAGTGGGCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFVVKIK*DSGLLF
Trigger: GAAGAGAAGCCCACTATCTCATTTAATCTTTACAAC...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552962.5
CDS-3UTR TCA 90 bp GCATTAATTCAAGAACCAAGCCATGCATATGTTCGTGTATTCATTCATCAATCGTCATCAATCGTTCAGTaGTGTGTAAAGAGTCTACAA +
Preference number: 4 (lower is better)
Translates to: ALIQEPSHAYVRVFIHQSSSIVQ*CVKSLQ
Trigger: TTGTAGACTCTTTACACATCACTGAACGATTGATGA...CGATTGATGAATGAATACACGAACATATGCATGGCTTGGTTCTTGAATTAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR GCA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGGTTATTTTGTTGTTTTaGAGGTCTAGCAGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: GNLALCIISHVGKTSTLQVILLF*RSSRVV
Trigger: CACAACTCTGCTAGACCTGCAAAACAACAAAATAAC...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000552962.5
CDS-3UTR GCA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTTTTTTCATGTTCCACTaGACTCATTCTGCTACTATT +
Preference number: 4 (lower is better)
Translates to: ACIEFTHSNEALPVMMGIFFMFH*THSATI
Trigger: AATAGTAGCAGAATGAGTGCAGTGGAACATGAAAAA...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp AACATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTGAAGTTTGTTTGAAATaGAGAATCTCAGACCTCGAT +
Preference number: 4 (lower is better)
Translates to: NISSLDQSGNVCFVLYKLEVCLK*RISDLD
Trigger: ATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTC...AAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp AACATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTAAGATTATGATATCCTaGAGCTGCCTCTGCAATAAA +
Preference number: 4 (lower is better)
Translates to: NISSLDQSGNVCFVLYKLKIMIS*SCLCNK
Trigger: TTTATTGCAGAGGCAGCTGCAGGATATCATAATCTT...AAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCCTCTCACCTGATTATTaGACTAGCATCCGAAATATT +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFLSPDY*TSIRNI
Trigger: AATATTTCGGATGCTAGTGCAATAATCAGGTGAGAG...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp AACCAAATACTGCATGTTCTCACGCATAAATGGAAGTTGAATGCTGAGAACACACAGAAAACCAAATACTaGATGTTCTCACGCATAAAT +
Preference number: 4 (lower is better)
Translates to: NQILHVLTHKWKLNAENTQKTKY*MFSRIN
Trigger: ATTTATGCGTGAGAACATGCAGTATTTGGTTTTCTG...TGTGTTCTCAGCATTCAACTTCCATTTATGCGTGAGAACATGCAGTATTTGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR GCA 90 bp GCATTAATTCAAGAACCAAGCCATGCATATGTTCGTGTATTCATTCATCAATCGTCAAGAACCAAGCCATaGATATGTTCGTGTATTCAT +
Preference number: 4 (lower is better)
Translates to: ALIQEPSHAYVRVFIHQSSRTKP*ICSCIH
Trigger: ATGAATACACGAACATATGCATGGCTTGGTTCTTGA...CGATTGATGAATGAATACACGAACATATGCATGGCTTGGTTCTTGAATTAATGC
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR CCA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGAACTATTATGCATCTATaGAAACCCACCTCAACTGTT +
Preference number: 4 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRTIMHL*KPTSTV
Trigger: AACAGTTGAGGTGGGTTTCCATAGATGCATAATAGT...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp AATCTGGTAAACATCATGTTGGACAAAGGCCAGGTTGTCTTAAAACATCATGCTATTCAACTTCATAATTaGGACATTGGTGGTGTACTT +
Preference number: 4 (lower is better)
Translates to: NLVNIMLDKGQVVLKHHAIQLHN*DIGGVL
Trigger: AAGTACACCACCAATGTCCCAATTATGAAGTTGAAT...AGCATGATGTTTTAAGACAACCTGGCCTTTGTCCAACATGATGTTTACCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546745.5
CDS-3UTR TCA 90 bp ATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAATTTCAAAACCAGATATTTaGTTCTCAGTTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ISVLIKKDHNLYSGISRISKPDI*FSVLPA
Trigger: AGCTGGAAGAACTGAGAATCAAATATCTGGTTTTGA...AATTCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR TCA 90 bp TTTCTGGGTTCCTATAGGCAGTTTATTCCAATTGTAGAAGTTGCATTTTTCTTCCTAGAAAGCATGTTCTaGGTAAATATAGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: FLGSYRQFIPIVEVAFFFLESMF*VNIGLL
Trigger: CAGAAGTCCTATATTTACTCAGAACATGCTTTCTAG...GAAGAAAAATGCAACTTCTACAATTGGAATAAACTGCCTATAGGAACCCAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR TCA 90 bp TCCAATTACAAGGTAAGTTGCAACAAGTTCAATGAAACAACTTGGCCAATATCTCTTGGCCAATATCTATaGGGAATTCATGTTTACTGT +
Preference number: 4 (lower is better)
Translates to: SNYKVSCNKFNETTWPISLGQYL*GIHVYC
Trigger: ACAGTAAACATGAATTCCTCATAGATATTGGCCAAG...AGATATTGGCCAAGTTGTTTCATTGAACTTGTTGCAACTTACCTTGTAATTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR GCA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGATATATTATCTCTTCTTaGTCACTTTACTCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRYIISS*SLYSAH
Trigger: GTGAGCAGAGTAAAGTGAGCAAGAAGAGATAATATA...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp ATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAATTAAAAGTCCTACAGGATaGGATTGTCATTACCTTTCT +
Preference number: 4 (lower is better)
Translates to: ISVLIKKDHNLYSGISRIKSPTG*DCHYLS
Trigger: AGAAAGGTAATGACAATCGCATCCTGTAGGACTTTT...AATTCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR GCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCCCTTGCACAATATTTTaGACACAAATGACTCAATTG +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFPCTIF*TQMTQL
Trigger: CAATTGAGTCATTTGTGTGCAAAATATTGTGCAAGG...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552962.5
CDS-3UTR CCA 90 bp AACATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTTCTATGACAATCATCTaGTTCAGTCCATTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: NISSLDQSGNVCFVLYKLSMTII*FSPLKV
Trigger: TACTTTCAATGGACTGAACCAGATGATTGTCATAGA...AAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000393155.6
CDS-3UTR CCA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCTCTATGACAATCATCTaGTTCAGTCCATTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFSMTII*FSPLKV
Trigger: TACTTTCAATGGACTGAACCAGATGATTGTCATAGA...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CCA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGATACAGAGCTAGTGTTTaGCATTTGACTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRYRASV*HLTLSQ
Trigger: TTGAGATAAAGTCAAATGCCAAACACTAGCTCTGTA...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CCA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGTACAGAGCTAGTGTTTaGCATTTGACTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: EFTHSNEALPVMMGINTEYRASV*HLTLSQ
Trigger: TTGAGATAAAGTCAAATGCCAAACACTAGCTCTGTA...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR CCA 90 bp TTTCTGGGTTCCTATAGGCAGTTTATTCCAATTGTAGAAGTTGCATTTTTCTTCAGAAGGAAGTACACATaGCGGAATCATGATATAAAG +
Preference number: 4 (lower is better)
Translates to: FLGSYRQFIPIVEVAFFFRRKYT*RNHDIK
Trigger: CTTTATATCATGATTCCGCCATGTGTACTTCCTTCT...GAAGAAAAATGCAACTTCTACAATTGGAATAAACTGCCTATAGGAACCCAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR CCA 90 bp AAATGCACATCAATGATAGACTGGATAAAGGAAATGTGGTACATATACACCGTGACATCAATGATAGACTaGATAAAGGAAATGTGGTAC +
Preference number: 4 (lower is better)
Translates to: KCTSMIDWIKEMWYIYTVTSMID*IKEMWY
Trigger: GTACCACATTTCCTTTATCCAGTCTATCATTGATGT...CACGGTGTATATGTACCACATTTCCTTTATCCAGTCTATCATTGATGTGCATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR CCA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGTACAGAGCTAGTGTTTaGCATTTGACTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGYRASV*HLTLSQ
Trigger: TTGAGATAAAGTCAAATGCCAAACACTAGCTCTGTA...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS TCA 90 bp GGAGGAAGACCCAAATCAGAACACTGGACCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACTGGGCCTAGGGAGGGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: GGRPKSEHWTTRRWH*QRKGHTGPREGSKS
Trigger: CGACTTCGAGCCCTCCCTAGGCCCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGGTCTTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000425043.5
ENST00000546391.5
ENST00000547568.6
CDS TCA 90 bp CCCGTCTCTACCAAATCAGAACACTGGACCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACTGGGCCTAGGGAGGGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: PVSTKSEHWTTRRWH*QRKGHTGPREGSKS
Trigger: CGACTTCGAGCCCTCCCTAGGCCCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGTAGAGACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546370.5
CDS TCA 90 bp TTGTCCAGACCCAAATCAGAACACTGGACCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACTGGGCCTAGGGAGGGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: LSRPKSEHWTTRRWH*QRKGHTGPREGSKS
Trigger: CGACTTCGAGCCCTCCCTAGGCCCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGGTCTGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000052754.10
ENST00000441303.6
ENST00000547937.5
ENST00000549513.5
ENST00000550563.5
ENST00000552145.5
ENST00000552962.5
CDS TCA 90 bp GGTAGACAACCCAAATCAGAACACTGGACCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACTGGGCCTAGGGAGGGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: GRQPKSEHWTTRRWH*QRKGHTGPREGSKS
Trigger: CGACTTCGAGCCCTCCCTAGGCCCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGGTTGTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456569.2
CDS TCA 90 bp GAATCAATGCCCAAATCAGAACACTGGACCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACTGGGCCTAGGGAGGGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: ESMPKSEHWTTRRWH*QRKGHTGPREGSKS
Trigger: CGACTTCGAGCCCTCCCTAGGCCCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGGCATTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS TCA 90 bp CCAAATTTTTCCAAATCAGAACACTGGACCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACTGGGCCTAGGGAGGGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: PNFSKSEHWTTRRWH*QRKGHTGPREGSKS
Trigger: CGACTTCGAGCCCTCCCTAGGCCCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGAAAAATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS TCA 90 bp TACTTCTTTTCCAAATCAGAACACTGGACCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACTGGGCCTAGGGAGGGCTCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: YFFSKSEHWTTRRWH*QRKGHTGPREGSKS
Trigger: CGACTTCGAGCCCTCCCTAGGCCCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGAAAAGAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR CAA 90 bp GAACTTAGAGGATGGGTCAGTAGGGCCAGCAAACCACCATGGCACACGTATACCTTGGCCAGAGAGCCATaGTCAACAGCAGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: ELRGWVSRASKPPWHTYTLAREP*STAEML
Trigger: CAGCATCTCTGCTGTTGACAATGGCTCTCTGGCCAA...GGTATACGTGTGCCATGGTGGTTTGCTGGCCCTACTGACCCATCCTCTAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR CAA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTCAGTACTGGACCGGGTaGCTGAAAAGACTCACACCC +
Preference number: 5 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWIQYWTG*LKRLTP
Trigger: GGGTGTGAGTCTTTTCAGCAACCCGGTCCAGTACTG...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGTGTGAAGGGGCAGTCTaGGACTGGGACTGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKCEGAV*DWDCLE
Trigger: TTCCAGGCAGTCCCAGTCCAAGACTGCCCCTTCACA...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp ACTTGTGGCTTCAAACTCCCCCTACTCACTATGGCACCAACATCACCACCCCTAAGCAGGGTGGGGGTCTaGCTTTTTGGATATTCCTCA +
Preference number: 5 (lower is better)
Translates to: TCGFKLPLLTMAPTSPPLSRVGV*LFGYSS
Trigger: TGAGGAATATCCAAAAAGCAAGACCCCCACCCTGCT...TAGGGGTGGTGATGTTGGTGCCATAGTGAGTAGGGGGAGTTTGAAGCCACAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS CCA 90 bp AGCAGGGTGGGGGTCTTGCTTTTTGGATATTCCTCACATAAGCAGTaGCTTTGCATTACCTGGATGTACTTATGCTCTGCCAGCCCACCA +
Preference number: 5 (lower is better)
Translates to: SRVGVLLFGYSSHKQ*LCITWMYLCSASPP
Trigger: TGGTGGGCTGGCAGAGCATAAGTACATCCAGGTAATGCAAAGCCACTGCTTATGTGAGGAATATCCAAAAAGCAAGACCCCCACCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS TCA 90 bp GTAGGAGAGCTTCTTCATTCCCTGGAAAGCCCCATTTTCAATTCCTaGGCTCTTCAGCGGATTGGTGCCCAGTTCCAAATCAGAACACTG +
Preference number: 5 (lower is better)
Translates to: VGELLHSLESPIFNS*ALQRIGAQFQIRTL
Trigger: CAGTGTTCTGATTTGGAACTGGGCACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGGGCTTTCCAGGGAATGAAGAAGCTCTCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420120.6
CDS-3UTR CAA 90 bp TTCCTGGAAGTTTGTTTGAAATGCAGAATCTCAGACCTCGATCCAGAACTGACACACTCGAAGATGGCATaGACAGCGGAAGGGGCACAC +
Preference number: 5 (lower is better)
Translates to: FLEVCLKCRISDLDPELTHSKMA*TAEGAH
Trigger: GTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTG...TGTCAGTTCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp TTTGGTGATCTCATTCTCATGGGCACGCAGCTCCTGAAGAGTTTTGGGCATTTTGAGCTCTTCAGCGGATaGGTGCCCAGTTCTATGACA +
Preference number: 5 (lower is better)
Translates to: FGDLILMGTQLLKSFGHFELFSG*VPSSMT
Trigger: TGTCATAGAACTGGGCACCAATCCGCTGAAGAGCTC...AAAATGCCCAAAACTCTTCAGGAGCTGCGTGCCCATGAGAATGAGATCACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CAA 90 bp CCTTTCTCCCCATGCCTAGAGCAGAGCTCATCCATGATGGGTTCCCGATATAGCGAACAAATAGATCCATaGGAATTATCCTGCGGCCTT +
Preference number: 5 (lower is better)
Translates to: PFSPCLEQSSSMMGSRYSEQIDP*ELSCGL
Trigger: AAGGCCGCAGGATAATTCCAATGGATCTATTTGTTC...GCTATATCGGGAACCCATCATGGATGAGCTCTGCTCTAGGCATGGGGAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR CAA 90 bp ACTTGTGGCTTCAAACTCCCCCTACTCACTATGGCACCAACATCACCACCCCTATGGGGGTCTTGCTTTTaGGATATTCCTCACATAAGC +
Preference number: 5 (lower is better)
Translates to: TCGFKLPLLTMAPTSPPLWGSCF*DIPHIS
Trigger: GCTTATGTGAGGAATATCCAAAAAGCAAGACCCCCA...TAGGGGTGGTGATGTTGGTGCCATAGTGAGTAGGGGGAGTTTGAAGCCACAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR CAA 90 bp TGGCTTCAAACTCCCCCTACTCACTATGGCACCAACATCACCACCCCTACTGAAACGCATAAATGGAAGTaGAATGCTGAGAACACACGG +
Preference number: 5 (lower is better)
Translates to: WLQTPPTHYGTNITTPTETHKWK*NAENTR
Trigger: CCGTGTGTTCTCAGCATTCAACTTCCATTTATGCGT...TTCAGTAGGGGTGGTGATGTTGGTGCCATAGTGAGTAGGGGGAGTTTGAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS TCA 90 bp CCAGAAGCCTCATCTTCTAGCATAAAGTCAAATAAGCCTCTCTGTTaGAACGGTCCAGCCCAGGAAACTTGTGCAAGCAGAAGGAGGATG +
Preference number: 5 (lower is better)
Translates to: PEASSSSIKSNKPLC*NGPAQETCASRRRM
Trigger: CATCCTCCTTCTGCTTGCACAAGTTTCCTGGGCTGGACCGTTTCAACAGAGAGGCTTATTTGACTTTATGCTAGAAGATGAGGCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000420120.6
ENST00000425043.5
ENST00000441303.6
ENST00000456569.2
ENST00000546370.5
ENST00000546391.5
ENST00000546745.5
ENST00000547568.6
ENST00000547937.5
ENST00000549513.5
ENST00000550099.5
ENST00000550563.5
ENST00000551354.1
ENST00000552145.5
ENST00000552962.5
CDS-3UTR CAA 90 bp ACCGAGACCCCTCTAATAGCTCTCTGTCTTACTCAGAGTAAAAGCTCATCTTTAGCAGGTCTAGCAGAGTaGTGTCAGGGGGAAGATCCT +
Preference number: 5 (lower is better)
Translates to: TETPLIALCLTQSKSSSLAGLAE*CQGEDP
Trigger: AGGATCTTCCCCCTGACACAACTCTGCTAGACCTGC...TAAAGATGAGCTTTTACTCTGAGTAAGACAGAGAGCTATTAGAGGGGTCTCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS TCA 90 bp TGCCATGTAGAATACCGACCTTGCAAGAGAGTTGTAAAGATTAAATaGGATAGTGGGCTTCTCTTCTGTGTCCCCTGGCTCATCCAGGCA +
Preference number: 5 (lower is better)
Translates to: CHVEYRPCKRVVKIK*DSGLLFCVPWLIQA
Trigger: TGCCTGGATGAGCCAGGGGACACAGAAGAGAAGCCCACTATCTCATTTAATCTTTACAACTCTCTTGCAAGGTCGGTATTCTACATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548768.1
CDS TCA 90 bp CTAGCCACATTCCTTTTCATTGTCACTCCATTCCCAGTCCTCACCTaGACCCTGACAATCAAAGCTACTTGCCATGTAGAATACCGACCT +
Preference number: 5 (lower is better)
Translates to: LATFLFIVTPFPVLT*TLTIKATCHVEYRP
Trigger: AGGTCGGTATTCTACATGGCAAGTAGCTTTGATTGTCAGGGTTCAGGTGAGGACTGGGAATGGAGTGACAATGAAAAGGAATGTGGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548768.1
CDS-3UTR CAA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTACAGCAGAGATGCTGTaGAAACTCAATCCCAACTTA +
Preference number: 5 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWITAEML*KLNPNL
Trigger: TAAGTTGGGATTGAGTTTCAACAGCATCTCTGCTGT...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GCTGCATCAACTCTGCTGATTTTGTTGCCATCAAGATGTAATTCCGTAAGGGAATTGGCCAGAGAGCCATaGTCAACAGCAGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: AASTLLILLPSRCNSVRELAREP*STAEML
Trigger: CAGCATCTCTGCTGTTGACAATGGCTCTCTGGCCAA...TTCCCTTACGGAATTACATCTTGATGGCAACAAAATCAGCAGAGTTGATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CAA 90 bp TCTGCTGACTTATTTCTCCAAGTGTGGACCAAGAAGCAGCAGCATTCCTGGAAGCTTTGTGGTGTGAAATaGACAGTCTGTCACAGACCT +
Preference number: 5 (lower is better)
Translates to: SADLFLQVWTKKQQHSWKLCGVK*TVCHRP
Trigger: AGGTCTGTGACAGACTGTCAATTTCACACCACAAAG...CTTCCAGGAATGCTGCTGCTTCTTGGTCCACACTTGGAGAAATAAGTCAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS TCA 90 bp ATTTTCACAACCAGGGAACCTTGCAAGAGAGTTGTAAAGATTAAATaGGATAGTGGGCTTCTCTTCTGTGTCCCCTGGCTCATCCAGGCA +
Preference number: 5 (lower is better)
Translates to: IFTTREPCKRVVKIK*DSGLLFCVPWLIQA
Trigger: TGCCTGGATGAGCCAGGGGACACAGAAGAGAAGCCCACTATCTCATTTAATCTTTACAACTCTCTTGCAAGGTTCCCTGGTTGTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000546370.5
ENST00000546391.5
ENST00000550099.5
ENST00000551354.1
ENST00000552962.5
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGCACTCGAAGATGGCATaGACAGCGGAAGGGGCACAC +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQHSKMA*TAEGAH
Trigger: GTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTG...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CAA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTCAGTACTGGACCGGGTaGCTGAAAAGACTCACACCC +
Preference number: 5 (lower is better)
Translates to: ACIEFTHSNEALPVMMGIQYWTG*LKRLTP
Trigger: GGGTGTGAGTCTTTTCAGCAACCCGGTCCAGTACTG...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR CAA 90 bp AAGCCTCCTTTATGCCAACCTGTCAGAGGTGTGTCCCAGCATACGTCTTGGATTAGCATTCCTGGAAGTTaGTTTGAAATGCAGAATCTC +
Preference number: 5 (lower is better)
Translates to: KPPLCQPVRGVSQHTSWISIPGS*FEMQNL
Trigger: GAGATTCTGCATTTCAAACAAACTTCCAGGAATGCT...AATCCAAGACGTATGCTGGGACACACCTCTGACAGGTTGGCATAAAGGAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGCAGGGGGAAGATCCTTaGGCACTTTGTCCAGACCCA +
Preference number: 5 (lower is better)
Translates to: EFTHSNEALPVMMGINTEQGEDP*ALCPDP
Trigger: TGGGTCTGGACAAAGTGCCAAAGGATCTTCCCCCTG...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGCAGGGGGAAGATCCTTaGGCACTTTGTCCAGACCCA +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQQGEDP*ALCPDP
Trigger: TGGGTCTGGACAAAGTGCCAAAGGATCTTCCCCCTG...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000552962.5
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGGCAGGTCTAGCAGAGTaGTGTCAGGGGGAAGATCCT +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQAGLAE*CQGEDP
Trigger: AGGATCTTCCCCCTGACACAACTCTGCTAGACCTGC...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000552962.5
CDS-3UTR CAA 90 bp GCTGGTGATATTGGTATCAGCAATGCGGATGTAGGAGAGCTTCTTCATTCCCTGATCTGGTTCAGTCCATaGAAAGTAACTTTTCGCACT +
Preference number: 5 (lower is better)
Translates to: AGDIGISNADVGELLHSLIWFSP*KVTFRT
Trigger: AGTGCGAAAAGTTACTTTCAATGGACTGAACCAGAT...CAGGGAATGAAGAAGCTCTCCTACATCCGCATTGCTGATACCAATATCACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CAA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTTTGGCCAGAGAGCCATaGTCAACAGCAGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: ACIEFTHSNEALPVMMGILAREP*STAEML
Trigger: CAGCATCTCTGCTGTTGACAATGGCTCTCTGGCCAA...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CAA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGCAGTACTGGACCGGGTaGCTGAAAAGACTCACACCC +
Preference number: 5 (lower is better)
Translates to: EFTHSNEALPVMMGINTEQYWTG*LKRLTP
Trigger: GGGTGTGAGTCTTTTCAGCAACCCGGTCCAGTACTG...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCCAGTACTGGACCGGGTaGCTGAAAAGACTCACACCC +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFQYWTG*LKRLTP
Trigger: GGGTGTGAGTCTTTTCAGCAACCCGGTCCAGTACTG...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CAA 90 bp GCTGCATCAACTCTGCTGATTTTGTTGCCATCAAGATGTAATTCCGTAAGGGAACTTATAGTTTCCGAGTaGAATGGCAGAGCGCACGTA +
Preference number: 5 (lower is better)
Translates to: AASTLLILLPSRCNSVRELIVSE*NGRAHV
Trigger: TACGTGCGCTCTGCCATTCAACTCGGAAACTATAAG...TTCCCTTACGGAATTACATCTTGATGGCAACAAAATCAGCAGAGTTGATGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CAA 90 bp ACCGAGACCCCTCTAATAGCTCTCTGTCTTACTCAGAGTAAAAGCTCATCTTTAGCCTCTTTTCTTGGCTaGCTCCCTTCAGTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: TETPLIALCLTQSKSSSLASFLG*LPSVLH
Trigger: ATGAAGAACTGAAGGGAGCAAGCCAAGAAAAGAGGC...TAAAGATGAGCTTTTACTCTGAGTAAGACAGAGAGCTATTAGAGGGGTCTCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GGTTTTACAGTTGTCCTTAAAGGGAAGGAGCAAGGATGCACTGAGAAATCACTTCTGGTAAACATCATGTaGGACAAAGGCCAGGTTGTC +
Preference number: 5 (lower is better)
Translates to: GFTVVLKGKEQGCTEKSLLVNIM*DKGQVV
Trigger: GACAACCTGGCCTTTGTCCAACATGATGTTTACCAG...AAGTGATTTCTCAGTGCATCCTTGCTCCTTCCCTTTAAGGACAACTGTAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546745.5
CDS-3UTR CAA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTAGATCCTTTGGCACTTaGTCCAGACCCAAATCAGAA +
Preference number: 5 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSRSFGT*SRPKSE
Trigger: TTCTGATTTGGGTCTGGACAAAGTGCCAAAGGATCT...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCGAGCTCTTCAGCGGATaGGTGCCCAGTTCTATGACA +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFELFSG*VPSSMT
Trigger: TGTCATAGAACTGGGCACCAATCCGCTGAAGAGCTC...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCTTGGCCAGAGAGCCATaGTCAACAGCAGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFLAREP*STAEML
Trigger: CAGCATCTCTGCTGTTGACAATGGCTCTCTGGCCAA...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CAA 90 bp ACCGAGACCCCTCTAATAGCTCTCTGTCTTACTCAGAGTAAAAGCTCATCTTTATTTGTGTTTCTATGCTaGTTCCTGATGGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TETPLIALCLTQSKSSSLFVFLC*FLMAWK
Trigger: CTTCCAGGCCATCAGGAACAAGCATAGAAACACAAA...TAAAGATGAGCTTTTACTCTGAGTAAGACAGAGAGCTATTAGAGGGGTCTCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTCAGGGCCTCTTTTCTaGGCTTGCTCCCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQSGPLF*ACSLQF
Trigger: GAACTGAAGGGAGCAAGCCAAGAAAAGAGGCCCTGA...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp TTTCTGCAGATGGAGATGTCAAGGCTCTCAACAGCTTGCCAGCATCATAAAGTATTACATAACAGAGAATaGGAAAACTGGCCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: FLQMEMSRLSTACQHHKVLHNRE*ENWPSA
Trigger: AGCACTGGGCCAGTTTTCCAATTCTCTGTTATGTAA...TACTTTATGATGCTGGCAAGCTGTTGAGAGCCTTGACATCTCCATCTGCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS TCA 90 bp ATAAGAAGCCTTTTTGGTGTTGTGTCCAGGTGGGCAGAAGTCACTTaGTCCAACTACAGAGATATTGTTGTTATGAAGGTAGACAACGTG +
Preference number: 5 (lower is better)
Translates to: IRSLFGVVSRWAEVT*SNYRDIVVMKVDNV
Trigger: CACGTTGTCTACCTTCATAACAACAATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCACCTGGACACAACACCAAAAAGGCTTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441303.6
CDS GCA 90 bp TCCTTCAGGGCGTGTCTTATTATTCCTTGTTCTGTACCCGGGCCTTaGACAATATTTTGCACACAAATGACTCAATTGACCATCACTTTA +
Preference number: 5 (lower is better)
Translates to: SFRACLIIPCSVPGP*TIFCTQMTQLTITL
Trigger: TAAAGTGATGGTCAATTGAGTCATTTGTGTGCAAAATATTGTGCAAGGCCCGGGTACAGAACAAGGAATAATAAGACACGCCCTGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548768.1
ENST00000552962.5
CDS-3UTR CAA 90 bp TCCAAAATGGTCTTCCCCTCTTTAGATTTCTACTTATTTCTCACCACACTTGTCTGCTCTGTGACTAGGTaGAAAACCTCCTGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: SKMVFPSLDFYLFLTTLVCSVTR*KTSCFY
Trigger: GTAGAAGCAGGAGGTTTTCAACCTAGTCACAGAGCA...GACAAGTGTGGTGAGAAATAAGTAGAAATCTAAAGAGGGGAAGACCATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp TTTGGTGATCTCATTCTCATGGGCACGCAGCTCCTGAAGAGTTTTGGGCATTTTGCTCCAGGACTAACTTaGCTAATTTTATTGTTGACA +
Preference number: 5 (lower is better)
Translates to: FGDLILMGTQLLKSFGHFAPGLT*LILLLT
Trigger: TGTCAACAATAAAATTAGCAAAGTTAGTCCTGGAGC...AAAATGCCCAAAACTCTTCAGGAGCTGCGTGCCCATGAGAATGAGATCACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CAA 90 bp TCCAAAATGGTCTTCCCCTCTTTAGATTTCTACTTATTTCTCACCACACTTGTCGGAATGCTGGTGATATaGGTATCAGCAATGCGGATG +
Preference number: 5 (lower is better)
Translates to: SKMVFPSLDFYLFLTTLVGMLVI*VSAMRM
Trigger: CATCCGCATTGCTGATACCAATATCACCAGCATTCC...GACAAGTGTGGTGAGAAATAAGTAGAAATCTAAAGAGGGGAAGACCATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTGGAATGCTGGTGATATaGGTATCAGCAATGCGGATG +
Preference number: 5 (lower is better)
Translates to: ACIEFTHSNEALPVMMGIGMLVI*VSAMRM
Trigger: CATCCGCATTGCTGATACCAATATCACCAGCATTCC...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000393155.6
CDS-3UTR CAA 90 bp GTTCAGTCCATTGAAAGTAACTTTTCGCACTTTGGTGATCTCATTCTCATGGGCACAGCAGAGATGCTGTaGAAACTCAATCCCAACTTA +
Preference number: 5 (lower is better)
Translates to: VQSIESNFSHFGDLILMGTAEML*KLNPNL
Trigger: TAAGTTGGGATTGAGTTTCAACAGCATCTCTGCTGT...GCCCATGAGAATGAGATCACCAAAGTGCGAAAAGTTACTTTCAATGGACTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393155.6
CDS-3UTR CAA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGTTGGCCAGAGAGCCATaGTCAACAGCAGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGLAREP*STAEML
Trigger: CAGCATCTCTGCTGTTGACAATGGCTCTCTGGCCAA...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CAA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTCTTATAGTTTCCGAGTaGAATGGCAGAGCGCACGTA +
Preference number: 5 (lower is better)
Translates to: ACIEFTHSNEALPVMMGILIVSE*NGRAHV
Trigger: TACGTGCGCTCTGCCATTCAACTCGGAAACTATAAG...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR CAA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGAACTTAGTCCCTGTCTaGAATAGTGCCTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: EFTHSNEALPVMMGINTENLVPV*NSASPP
Trigger: TGGTGGGGAGGCACTATTCAAGACAGGGACTAAGTT...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp TTCCTGGAAGTTTGTTTGAAATGCAGAATCTCAGACCTCGATCCAGAACTGACACATACGTCTTGGATTTaGAACTTAGTCCCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: FLEVCLKCRISDLDPELTHTSWI*NLVPVL
Trigger: CAAGACAGGGACTAAGTTCAAAATCCAAGACGTATG...TGTCAGTTCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTTATTTCTCACCACACTaGTCAGTTAAGCAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSYFSPH*SVKQQD
Trigger: ATCCTGCTGCTTAACTGACAAGTGTGGTGAGAAATA...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp ACCGAGACCCCTCTAATAGCTCTCTGTCTTACTCAGAGTAAAAGCTCATCTTTATGTGTTGGATCTGCCTaGCAGATAAGTGTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: TETPLIALCLTQSKSSSLCVGSA*QISVQN
Trigger: ATTTTGGACACTTATCTGCAAGGCAGATCCAACACA...TAAAGATGAGCTTTTACTCTGAGTAAGACAGAGAGCTATTAGAGGGGTCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp TTCCTGGAAGTTTGTTTGAAATGCAGAATCTCAGACCTCGATCCAGAACTGACACCGAAATATTCTCTCTaGGCCTATTCCTGTTACCTT +
Preference number: 5 (lower is better)
Translates to: FLEVCLKCRISDLDPELTPKYSL*AYSCYL
Trigger: AAGGTAACAGGAATAGGCCAAGAGAGAATATTTCGG...TGTCAGTTCTGGATCGAGGTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp AGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCTCACAACCAGGGAACCTaGCAAGAGAGTTGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: RNHFCFSIRHVPFSLQLAHNQGT*QESCKD
Trigger: ATCTTTACAACTCTCTTGCAAGGTTCCCTGGTTGTG...AGCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550099.5
CDS-3UTR CAA 90 bp GAGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCCCTTCTCTTTGCAGCTaGCTAGAGTCAAGAATATTG +
Preference number: 5 (lower is better)
Translates to: EKSLLFLNQACSLLFAACPSLCS*LESRIL
Trigger: CAATATTCTTGACTCTAGCAAGCTGCAAAGAGAAGG...GCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR CAA 90 bp AGAAATCACTTTTGTTTCTCAATCAGGCATGTTCCCTTCTCTTTGCAGCTTGCTTTCCTGGTTTTACAGTaGTCCTTAAAGGGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: RNHFCFSIRHVPFSLQLAFLVLQ*SLKGRS
Trigger: GCTCCTTCCCTTTAAGGACAACTGTAAAACCAGGAA...AGCAAGCTGCAAAGAGAAGGGAACATGCCTGATTGAGAAACAAAAGTGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS TCA 90 bp GTCCACAGTCCCTGTGCTGTATGTCAGACCACTCATAAATTGGTATaGATTAATAGCTCTAGCCACATTCCTTTTCATTGTCACTCCATT +
Preference number: 5 (lower is better)
Translates to: VHSPCAVCQTTHKLV*INSSSHIPFHCHSI
Trigger: AATGGAGTGACAATGAAAAGGAATGTGGCTAGAGCTATTAATTCATACCAATTTATGAGTGGTCTGACATACAGCACAGGGACTGTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548768.1
CDS-3UTR CAA 90 bp AACATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTTGCTCTGTGACTAGGTaGAAAACCTCCTGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: NISSLDQSGNVCFVLYKLCSVTR*KTSCFY
Trigger: GTAGAAGCAGGAGGTTTTCAACCTAGTCACAGAGCA...AAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000393155.6
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTGCTCTGTGACTAGGTaGAAAACCTCCTGCTTCTAC +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQCSVTR*KTSCFY
Trigger: GTAGAAGCAGGAGGTTTTCAACCTAGTCACAGAGCA...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CAA 90 bp TTTCTACTTATTTCTCACCACACTTGTCAGTTAAGCAGCAGGATATCTGCAGGCATCTGGTTCAGTCCATaGAAAGTAACTTTTCGCACT +
Preference number: 5 (lower is better)
Translates to: FLLISHHTCQLSSRISAGIWFSP*KVTFRT
Trigger: AGTGCGAAAAGTTACTTTCAATGGACTGAACCAGAT...GCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAGAAATAAGTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCGGAATGCTGGTGATATaGGTATCAGCAATGCGGATG +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFGMLVI*VSAMRM
Trigger: CATCCGCATTGCTGATACCAATATCACCAGCATTCC...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CAA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGAGGAAGGAGGAAGACCTaGAGGAATGCTGGTGATATT +
Preference number: 5 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRGRRKT*RNAGDI
Trigger: AATATCACCAGCATTCCTCAAGGTCTTCCTCCTTCC...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGGGAAGGAGGAAGACCTaGAGGAATGCTGGTGATATT +
Preference number: 5 (lower is better)
Translates to: EFTHSNEALPVMMGINTEGRRKT*RNAGDI
Trigger: AATATCACCAGCATTCCTCAAGGTCTTCCTCCTTCC...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000393155.6
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGGGAAGGAGGAAGACCTaGAGGAATGCTGGTGATATT +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQGRRKT*RNAGDI
Trigger: AATATCACCAGCATTCCTCAAGGTCTTCCTCCTTCC...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CAA 90 bp GCAGCCATAAAAAGGAATGGGATCATGTCCTTTACAAGGACATGGATGAAACTAACAGCAGAGATGCTGTaGAAACTCAATCCCAACTTA +
Preference number: 5 (lower is better)
Translates to: AAIKRNGIMSFTRTWMKLTAEML*KLNPNL
Trigger: TAAGTTGGGATTGAGTTTCAACAGCATCTCTGCTGT...TAGTTTCATCCATGTCCTTGTAAAGGACATGATCCCATTCCTTTTTATGGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS-3UTR CAA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTGTGGGCAGAAGTCACTaGATCCAACTACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: ACIEFTHSNEALPVMMGIVGRSH*IQLQRY
Trigger: ATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCAC...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CAA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGCTTATAGTTTCCGAGTaGAATGGCAGAGCGCACGTA +
Preference number: 5 (lower is better)
Translates to: EFTHSNEALPVMMGINTELIVSE*NGRAHV
Trigger: TACGTGCGCTCTGCCATTCAACTCGGAAACTATAAG...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000548218.1
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCCTTATAGTTTCCGAGTaGAATGGCAGAGCGCACGTA +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFLIVSE*NGRAHV
Trigger: TACGTGCGCTCTGCCATTCAACTCGGAAACTATAAG...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CAA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTCCTCCCCACCAAATCTaGCTCTTGAACTATTATGCA +
Preference number: 5 (lower is better)
Translates to: ACIEFTHSNEALPVMMGIPPHQI*LLNYYA
Trigger: TGCATAATAGTTCAAGAGCAAGATTTGGTGGGGAGG...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp TTTCTACTTATTTCTCACCACACTTGTCAGTTAAGCAGCAGGATATCTGCAGGCTTCCTGGAAGTTTGTTaGAAATGCAGAATCTCAGAC +
Preference number: 5 (lower is better)
Translates to: FLLISHHTCQLSSRISAGFLEVC*KCRISD
Trigger: GTCTGAGATTCTGCATTTCAAACAAACTTCCAGGAA...GCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAGAAATAAGTAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTACTCTGCTCACGTTaGTCCTCTCTGCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQLLCSR*SSLLLL
Trigger: CAACAAGAGCAGAGAGGACAAACGTGAGCAGAGTAA...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTCTGTACCCGGGCCTaGCACAATATTTTGCACACA +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQFCTRA*HNILHT
Trigger: TGTGTGCAAAATATTGTGCAAGGCCCGGGTACAGAA...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552962.5
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGGTGTCTTATTATTCCTaGTTCTGTACCCGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQVSYYS*FCTRAL
Trigger: CAAGGCCCGGGTACAGAACAAGGAATAATAAGACAC...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552962.5
CDS-3UTR CAA 90 bp TTTCTGCAGATGGAGATGTCAAGGCTCTCAACAGCTTGCCAGCATCATAAAGTAATGGGTCTCATAAAATaGTGGTTCCAATTACAAGGT +
Preference number: 5 (lower is better)
Translates to: FLQMEMSRLSTACQHHKVMGLIK*WFQLQG
Trigger: ACCTTGTAATTGGAACCACAATTTTATGAGACCCAT...TACTTTATGATGCTGGCAAGCTGTTGAGAGCCTTGACATCTCCATCTGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS CCA 90 bp ATACTGTCCACAGTCCCTGTGCTGTATGTCAGACCACTCATAAATTaGTATGAATTAATAGCTCTAGCCACATTCCTTTTCATTGTCACT +
Preference number: 5 (lower is better)
Translates to: ILSTVPVLYVRPLIN*YELIALATFLFIVT
Trigger: AGTGACAATGAAAAGGAATGTGGCTAGAGCTATTAATTCATACCAATTTATGAGTGGTCTGACATACAGCACAGGGACTGTGGACAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548768.1
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCAGATCCTTTGGCACTTaGTCCAGACCCAAATCAGAA +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFRSFGT*SRPKSE
Trigger: TTCTGATTTGGGTCTGGACAAAGTGCCAAAGGATCT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000552962.5
CDS-3UTR CAA 90 bp ACCAGATATTTGATTCTCAGTTCTTCCAGCTCAACCTCCCAGTCATTACCATCTATTTCGGTTATTTTGTaGTTTTGCAGGTCTAGCAGA +
Preference number: 5 (lower is better)
Translates to: TRYLILSSSSSTSQSLPSISVIL*FCRSSR
Trigger: TCTGCTAGACCTGCAAAACAACAAAATAACCGAAAT...AGATGGTAATGACTGGGAGGTTGAGCTGGAAGAACTGAGAATCAAATATCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTAATACAGAGGTGGGCAGAAGTCACTaGATCCAACTACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: EFTHSNEALPVMMGINTEVGRSH*IQLQRY
Trigger: ATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCAC...CTCTGTATTAATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCGTGGGCAGAAGTCACTaGATCCAACTACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFVGRSH*IQLQRY
Trigger: ATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCAC...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGGTGGGCAGAAGTCACTaGATCCAACTACAGAGATAT +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQVGRSH*IQLQRY
Trigger: ATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCAC...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CAA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGGTCCCAGCATACGTCTaGGATTTTGAACTTAGTCCC +
Preference number: 5 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGVPAYV*DFELSP
Trigger: GGGACTAAGTTCAAAATCCAAGACGTATGCTGGGAC...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp TTTCTACTTATTTCTCACCACACTTGTCAGTTAAGCAGCAGGATATCTGCAGGCCATATGCCCTTTCTTTaGGCTCAAAATTGTTCAACT +
Preference number: 5 (lower is better)
Translates to: FLLISHHTCQLSSRISAGHMPFL*AQNCST
Trigger: AGTTGAACAATTTTGAGCCAAAAGAAAGGGCATATG...GCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAGAAATAAGTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCCACAACCAGGGAACCTaGCAAGAGAGTTGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFHNQGT*QESCKD
Trigger: ATCTTTACAACTCTCTTGCAAGGTTCCCTGGTTGTG...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552962.5
CDS-3UTR CAA 90 bp GCATTAATTCAAGAACCAAGCCATGCATATGTTCGTGTATTCATTCATCAATCGTTCCTGGTTTTACAGTaGTCCTTAAAGGGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: ALIQEPSHAYVRVFIHQSFLVLQ*SLKGRS
Trigger: GCTCCTTCCCTTTAAGGACAACTGTAAAACCAGGAA...CGATTGATGAATGAATACACGAACATATGCATGGCTTGGTTCTTGAATTAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR CAA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGAGTAACTTTTCGCACTTaGGTGATCTCATTCTCATGG +
Preference number: 5 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRVTFRT*VISFSW
Trigger: CCATGAGAATGAGATCACCAAAGTGCGAAAAGTTAC...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp ATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTACAGTAACTTTTCGCACTTaGGTGATCTCATTCTCATGG +
Preference number: 5 (lower is better)
Translates to: ISSLDQSGNVCFVLYKLTVTFRT*VISFSW
Trigger: CCATGAGAATGAGATCACCAAAGTGCGAAAAGTTAC...TGTAAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000393155.6
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGGTAACTTTTCGCACTTaGGTGATCTCATTCTCATGG +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQVTFRT*VISFSW
Trigger: CCATGAGAATGAGATCACCAAAGTGCGAAAAGTTAC...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CAA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTACTCTGCTGATTTTGTaGCCATCAAGATGTAATTCC +
Preference number: 5 (lower is better)
Translates to: ACIEFTHSNEALPVMMGITLLIL*PSRCNS
Trigger: GGAATTACATCTTGATGGCAACAAAATCAGCAGAGT...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGACAGCAGAGATGCTGTaGAAACTCAATCCCAACTTA +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQTAEML*KLNPNL
Trigger: TAAGTTGGGATTGAGTTTCAACAGCATCTCTGCTGT...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CAA 90 bp CTGCTACTATTAGCAGAATTGATTACCTCTCATGTGAGCCACTACTATAACTTGCTACTATTAGCAGAATaGATTACCTCTCATGTGAGC +
Preference number: 5 (lower is better)
Translates to: LLLLAELITSHVSHYYNLLLLAE*ITSHVS
Trigger: GCTCACATGAGAGGTAATCAATTCTGCTAATAGTAG...CAAGTTATAGTAGTGGCTCACATGAGAGGTAATCAATTCTGCTAATAGTAGCAG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTCCTCTCAAAGACAGTaGAATCAAGTCACTCCTCTA +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQSSQRQ*NQVTPL
Trigger: TAGAGGAGTGACTTGATTCAACTGTCTTTGAGAGGA...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCAGATCTAAATCCTCCTaGACACCTCCATATGGAAGT +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFRSKSS*TPPYGS
Trigger: ACTTCCATATGGAGGTGTCAAGGAGGATTTAGATCT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp ATTTCTGTGCTGATAAAGAAGGATCACAATCTATATTCCGGCATCTCTAGAATTGCTCAACCCTTTCCCTaGAGCTCCAAAATTCTAGAT +
Preference number: 5 (lower is better)
Translates to: ISVLIKKDHNLYSGISRIAQPFP*SSKILD
Trigger: ATCTAGAATTTTGGAGCTCAAGGGAAAGGGTTGAGC...AATTCTAGAGATGCCGGAATATAGATTGTGATCCTTCTTTATCAGCACAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp TTTCTGGGTTCCTATAGGCAGTTTATTCCAATTGTAGAAGTTGCATTTTTCTTCCACAACCAGGGAACCTaGCAAGAGAGTTGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: FLGSYRQFIPIVEVAFFFHNQGT*QESCKD
Trigger: ATCTTTACAACTCTCTTGCAAGGTTCCCTGGTTGTG...GAAGAAAAATGCAACTTCTACAATTGGAATAAACTGCCTATAGGAACCCAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR CAA 90 bp GCATTAATTCAAGAACCAAGCCATGCATATGTTCGTGTATTCATTCATCAATCGCCTTCTCTTTGCAGCTaGCTAGAGTCAAGAATATTG +
Preference number: 5 (lower is better)
Translates to: ALIQEPSHAYVRVFIHQSPSLCS*LESRIL
Trigger: CAATATTCTTGACTCTAGCAAGCTGCAAAGAGAAGG...CGATTGATGAATGAATACACGAACATATGCATGGCTTGGTTCTTGAATTAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5
CDS-3UTR CAA 90 bp GAAAATGTCAGCAATCTGGTAAACATCATGTTGGACAAAGGCCAGGTTGTCTTATTCATAATTGGGACATaGGTGGTGTACTTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: ENVSNLVNIMLDKGQVVLFIIGT*VVYFSF
Trigger: AAAACTGAAGTACACCACCAATGTCCCAATTATGAA...TAAGACAACCTGGCCTTTGTCCAACATGATGTTTACCAGATTGCTGACATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546745.5
CDS-3UTR CAA 90 bp CTGCTACTATTAGCAGAATTGATTACCTCTCATGTGAGCCACTACTATAACTTGGCTCCAGGACTAACTTaGCTAATTTTATTGTTGACA +
Preference number: 5 (lower is better)
Translates to: LLLLAELITSHVSHYYNLAPGLT*LILLLT
Trigger: TGTCAACAATAAAATTAGCAAAGTTAGTCCTGGAGC...CAAGTTATAGTAGTGGCTCACATGAGAGGTAATCAATTCTGCTAATAGTAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGATCTGGTTCAGTCCATaGAAAGTAACTTTTCGCACT +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQIWFSP*KVTFRT
Trigger: AGTGCGAAAAGTTACTTTCAATGGACTGAACCAGAT...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCACTCTGCTGATTTTGTaGCCATCAAGATGTAATTCC +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFTLLIL*PSRCNS
Trigger: GGAATTACATCTTGATGGCAACAAAATCAGCAGAGT...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000552962.5
CDS-3UTR CAA 90 bp ATCAGTTCTCTAGACCAGTCAGGAAATGTATGCTTTGTGCTTTATAAGCTTACAACTCTGCTGATTTTGTaGCCATCAAGATGTAATTCC +
Preference number: 5 (lower is better)
Translates to: ISSLDQSGNVCFVLYKLTTLLIL*PSRCNS
Trigger: GGAATTACATCTTGATGGCAACAAAATCAGCAGAGT...TGTAAGCTTATAAAGCACAAAGCATACATTTCCTGACTGGTCTAGAGAACTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CAA 90 bp ACTGTTATTGTCAACAAACCAATGTCTTCTCCCTTCATAAAATTGTGTTTAGGGACAGCAGAGATGCTGTaGAAACTCAATCCCAACTTA +
Preference number: 5 (lower is better)
Translates to: TVIVNKPMSSPFIKLCLGTAEML*KLNPNL
Trigger: TAAGTTGGGATTGAGTTTCAACAGCATCTCTGCTGT...CCCTAAACACAATTTTATGAAGGGAGAAGACATTGGTTTGTTGACAATAACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
CDS-3UTR CAA 90 bp GCCTGTATTGAATTCACACATTCAAATGAGGCTTTACCAGTAATGATGGGGATTCCCAGGCTTATTAAATaGTCTGCATTGATAGTTGTT +
Preference number: 5 (lower is better)
Translates to: ACIEFTHSNEALPVMMGIPRLIK*SALIVV
Trigger: AACAACTATCAATGCAGACAATTTAATAAGCCTGGG...AATCCCCATCATTACTGGTAAAGCCTCATTTGAATGTGTGAATTCAATACAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp TCCAAAATGGTCTTCCCCTCTTTAGATTTCTACTTATTTCTCACCACACTTGTCACCTCCATATGGAAGTaGAATATGCATCTCAAAAAG +
Preference number: 5 (lower is better)
Translates to: SKMVFPSLDFYLFLTTLVTSIWK*NMHLKK
Trigger: CTTTTTGAGATGCATATTCAACTTCCATATGGAGGT...GACAAGTGTGGTGAGAAATAAGTAGAAATCTAAAGAGGGGAAGACCATTTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp AAAATACCTTGCATGAGACCACTGCTCATTGGAACTTACTTAGTTCCCTTAGTTAATATTGAAAATACCTaGCATGAGACCACTGCTCAT +
Preference number: 5 (lower is better)
Translates to: KIPCMRPLLIGTYLVPLVNIENT*HETTAH
Trigger: ATGAGCAGTGGTCTCATGCAAGGTATTTTCAATATT...AACTAAGGGAACTAAGTAAGTTCCAATGAGCAGTGGTCTCATGCAAGGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS-3UTR CAA 90 bp GGAAATTTGGCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGATTTCGGTTATTTTGTaGTTTTGCAGGTCTAGCAGA +
Preference number: 5 (lower is better)
Translates to: GNLALCIISHVGKTSTLQISVIL*FCRSSR
Trigger: TCTGCTAGACCTGCAAAACAACAAAATAACCGAAAT...CTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGCCAAATTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000052754.10
ENST00000552962.5
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCGCTCCAGGACTAACTTaGCTAATTTTATTGTTGACA +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFAPGLT*LILLLT
Trigger: TGTCAACAATAAAATTAGCAAAGTTAGTCCTGGAGC...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000552962.5
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCCACCAAATCTTGCTCTaGAACTATTATGCATCTATG +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFHQILL*NYYASM
Trigger: CATAGATGCATAATAGTTCAAGAGCAAGATTTGGTG...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp ATGTTCAATATCAAACCCCCAATACCTGTGAGTCTGACTTCATTTGGAAATAGAGCCTCTGCAATAAAATaGTGGAATAAACCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: MFNIKPPIPVSLTSFGNRASAIK*WNKPVS
Trigger: AGAAACTGGTTTATTCCACAATTTTATTGCAGAGGC...TCTATTTCCAAATGAAGTCAGACTCACAGGTATTGGGGGTTTGATATTGAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000052754.10
CDS-3UTR CAA 90 bp GCTTTATGCATAATAAGTCATGTGGGTAAAACATCCACATTGCAGTTAGGTTTCGCCTTGCACAATATTTaGCACACAAATGACTCAATT +
Preference number: 5 (lower is better)
Translates to: ALCIISHVGKTSTLQLGFALHNI*HTNDSI
Trigger: AATTGAGTCATTTGTGTGCAAAATATTGTGCAAGGC...GAAACCTAACTGCAATGTGGATGTTTTACCCACATGACTTATTATGCATAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552962.5
CDS-3UTR CAA 90 bp ACTAAAACAGTCCATGCATTTTTCCAGAGGCATCAAATTATCCTGCAGAGTAATCTAAGTGTAATGCTCTaGGAATTTCCAGACCAAATT +
Preference number: 5 (lower is better)
Translates to: TKTVHAFFQRHQIILQSNLSVML*EFPDQI
Trigger: AATTTGGTCTGGAAATTCCAAGAGCATTACACTTAG...ATTACTCTGCAGGATAATTTGATGCCTCTGGAAAAATGCATGGACTGTTTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551354.1
CDS TCA 72 bp CCCAAATCAGAACACTGGACCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACTGGGCCTAGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: PKSEHWTTRRWH*QRKGHTGPREG
Trigger: GCCCTCCCTAGGCCCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000425043.5
ENST00000441303.6
ENST00000456569.2
ENST00000546391.5
ENST00000547568.6
ENST00000547937.5
ENST00000549513.5
ENST00000550563.5
ENST00000552145.5
ENST00000552962.5
CDS TCA 72 bp TCCAAATCAGAACACTGGACCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACTGGGCCTAGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: SKSEHWTTRRWH*QRKGHTGPREG
Trigger: GCCCTCCCTAGGCCCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000420120.6
ENST00000546745.5
ENST00000550099.5
ENST00000551354.1
CDS TCA 72 bp ACCAAATCAGAACACTGGACCACTCGAAGATGGCATTaGCAGCGGAAGGGGCACACTGGGCCTAGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: TKSEHWTTRRWH*QRKGHTGPREG
Trigger: GCCCTCCCTAGGCCCAGTGTGCCCCTTCCGCTGTCAATGCCATCTTCGAGTGGTCCAGTGTTCTGATTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546370.5
CDS GCA 72 bp AGTTTGCAGGTGTGGAAAGGAGGAGGGGGTAGGTGCTaGTCTGTGACTAGGTTGAAAACCTCCTGCTTCTAC +
Preference number: 6 (lower is better)
Translates to: SLQVWKGGGGRC*SVTRLKTSCFY
Trigger: GTAGAAGCAGGAGGTTTTCAACCTAGTCACAGAGCAGCACCTACCCCCTCCTCCTTTCCACACCTGCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000547568.6
ENST00000552962.5
CDS TCA 72 bp CTTCTTCATTCCCTGGAAAGCCCCATTTTCAATTCCTaGGCTCTTCAGCGGATTGGTGCCCAGTTCCAAATC +
Preference number: 6 (lower is better)
Translates to: LLHSLESPIFNS*ALQRIGAQFQI
Trigger: GATTTGGAACTGGGCACCAATCCGCTGAAGAGCTCAGGAATTGAAAATGGGGCTTTCCAGGGAATGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420120.6
CDS CAA 72 bp GACGATGTACTCCTTCAGGGCGTGTCTTATTATTCCTaGTTCTGTACCCGGGCCTTGCACAATATTTTGCAC +
Preference number: 6 (lower is better)
Translates to: DDVLLQGVSYYS*FCTRALHNILH
Trigger: GTGCAAAATATTGTGCAAGGCCCGGGTACAGAACAAGGAATAATAAGACACGCCCTGAAGGAGTACATCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548768.1
ENST00000552962.5
CDS CCA 72 bp GGGGTCTTGCTTTTTGGATATTCCTCACATAAGCAGTaGCTTTGCATTACCTGGATGTACTTATGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: GVLLFGYSSHKQ*LCITWMYLCSA
Trigger: GGCAGAGCATAAGTACATCCAGGTAATGCAAAGCCACTGCTTATGTGAGGAATATCCAAAAAGCAAGACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS TCA 72 bp TTCCTTTTCATTGTCACTCCATTCCCAGTCCTCACCTaGACCCTGACAATCAAAGCTACTTGCCATGTAGAA +
Preference number: 6 (lower is better)
Translates to: FLFIVTPFPVLT*TLTIKATCHVE
Trigger: TTCTACATGGCAAGTAGCTTTGATTGTCAGGGTTCAGGTGAGGACTGGGAATGGAGTGACAATGAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548768.1
CDS GCA 72 bp TTGCTTTTTGGATATTCCTCACATAAGCAGTGGCTTTaGATTACCTGGATGTACTTATGCTCTGCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: LLFGYSSHKQWL*ITWMYLCSASP
Trigger: TGGGCTGGCAGAGCATAAGTACATCCAGGTAATGCAAAGCCACTGCTTATGTGAGGAATATCCAAAAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550758.1
CDS CAA 90 bp CTCCTTCAGGGCGTGTCTTATTATTCCTTGTTCTGTACCCGGGCCTaGCACAATATTTTGCACACAAATGACTCAATTGACCATCACTTT +
Preference number: 6 (lower is better)
Translates to: LLQGVSYYSLFCTRA*HNILHTNDSIDHHF
Trigger: AAAGTGATGGTCAATTGAGTCATTTGTGTGCAAAATATTGTGCAAGGCCCGGGTACAGAACAAGGAATAATAAGACACGCCCTGAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548768.1
ENST00000552962.5
CDS GCA 72 bp GCGTGTCTTATTATTCCTTGTTCTGTACCCGGGCCTTaGACAATATTTTGCACACAAATGACTCAATTGACC +
Preference number: 6 (lower is better)
Translates to: ACLIIPCSVPGP*TIFCTQMTQLT
Trigger: GGTCAATTGAGTCATTTGTGTGCAAAATATTGTGCAAGGCCCGGGTACAGAACAAGGAATAATAAGACACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548768.1
ENST00000552962.5
CDS CAA 90 bp AATAAGAAGCCTTTTTGGTGTTGTGTCCAGGTGGGCAGAAGTCACTaGATCCAACTACAGAGATATTGTTGTTATGAAGGTAGACAACGT +
Preference number: 6 (lower is better)
Translates to: NKKPFWCCVQVGRSH*IQLQRYCCYEGRQR
Trigger: ACGTTGTCTACCTTCATAACAACAATATCTCTGTAGTTGGATCAAGTGACTTCTGCCCACCTGGACACAACACCAAAAAGGCTTCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441303.6
CDS GCA 72 bp ATTCCTTGTTCTGTACCCGGGCCTTGCACAATATTTTaGACACAAATGACTCAATTGACCATCACTTTATTG +
Preference number: 6 (lower is better)
Translates to: IPCSVPGPCTIF*TQMTQLTITLL
Trigger: CAATAAAGTGATGGTCAATTGAGTCATTTGTGTGCAAAATATTGTGCAAGGCCCGGGTACAGAACAAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548768.1
ENST00000552962.5
CDS CAA 72 bp AACTTATCACATTATATTGCAATTTGTTTTGCGTGCTaGGTCTGTCCCTCACTAGACGATGTACTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: NLSHYIAICFAC*VCPSLDDVLLQ
Trigger: CTGAAGGAGTACATCGTCTAGTGAGGGACAGACCAAGCACGCAAAACAAATTGCAATATAATGTGATAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548768.1
ENST00000552962.5
CDS CAA 90 bp TCTGTACCCGGGCCTTGCACAATATTTTGCACACAAATGACTCAATaGACCATCACTTTATTGACAAGACGATTTATTCCATTTGTTCCA +
Preference number: 6 (lower is better)
Translates to: SVPGPCTIFCTQMTQ*TITLLTRRFIPFVP
Trigger: TGGAACAAATGGAATAAATCGTCTTGTCAATAAAGTGATGGTCAATTGAGTCATTTGTGTGCAAAATATTGTGCAAGGCCCGGGTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548768.1
ENST00000552962.5
CDS CAA 72 bp TATTCCTTGTTCTGTACCCGGGCCTTGCACAATATTTaGCACACAAATGACTCAATTGACCATCACTTTATT +
Preference number: 6 (lower is better)
Translates to: YSLFCTRALHNI*HTNDSIDHHFI
Trigger: AATAAAGTGATGGTCAATTGAGTCATTTGTGTGCAAAATATTGTGCAAGGCCCGGGTACAGAACAAGGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548768.1
ENST00000552962.5
CDS GCA 72 bp CAGATAAAGTCGTTCCAACTTCACCAAAGGTGTAAATaGTCCAGGACTAACTTTGCTAATTTTATTGTTGAC +
Preference number: 6 (lower is better)
Translates to: QIKSFQLHQRCK*SRTNFANFIVD
Trigger: GTCAACAATAAAATTAGCAAAGTTAGTCCTGGAGCATTTACACCTTTGGTGAAGTTGGAACGACTTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000052754.10
ENST00000393155.6
ENST00000547937.5
ENST00000550563.5
ENST00000552145.5
ENST00000552962.5
CDS CAA 72 bp GGGCCTTGCACAATATTTTGCACACAAATGACTCAATaGACCATCACTTTATTGACAAGACGATTTATTCCA +
Preference number: 6 (lower is better)
Translates to: GPCTIFCTQMTQ*TITLLTRRFIP
Trigger: TGGAATAAATCGTCTTGTCAATAAAGTGATGGTCAATTGAGTCATTTGTGTGCAAAATATTGTGCAAGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548768.1
ENST00000552962.5
CDS GCA 72 bp AATATTCATCCAAGCATTAATTCAAGAACCAAGCCATaGATATGTTCGTGTATTCATTCATCAATCGTTCAG +
Preference number: 6 (lower is better)
Translates to: NIHPSINSRTKP*ICSCIHSSIVQ
Trigger: CTGAACGATTGATGAATGAATACACGAACATATGCATGGCTTGGTTCTTGAATTAATGCTTGGATGAATATT
35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546745.5
ENST00000550099.5