RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCLRE1C (Homo sapiens)

Ensembl gene IDs: ENSG00000152457

Ensembl transcript IDs: ENST00000357717.6, ENST00000378241.5, ENST00000378242.1, ENST00000378246.6, ENST00000378249.5, ENST00000378254.5, ENST00000378255.5, ENST00000378258.5, ENST00000378278.7, ENST00000378289.8, ENST00000396817.6, ENST00000418843.5, ENST00000456122.1, ENST00000489161.1, ENST00000489845.1, ENST00000492201.5

Found 400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCTGGGCTCAAGCCATTaGCCACCTCAAAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALGSSH*PPQSAG
Trigger: CCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
3UTR-3UTR GCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTTGCCCACCTCAAAGTaGTGGGATTACAAGTGTGAG +
Preference number: 2 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALPTSK*WDYKCE
Trigger: CTCACACTTGTAATCCCAGCACTTTGAGGTGGGCAA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
3UTR-3UTR TCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTAGGCTGAGGTTGCAGTaGGCTGAGATAGGGCCACTG +
Preference number: 2 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFRLRLQ*AEIGPL
Trigger: CAGTGGCCCTATCTCAGCTCACTGCAACCTCAGCCT...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR TCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTTTGAACCCTGGAGGCTaGGGTTGCAGTGAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFLNPGG*GCSELR
Trigger: TCTCAGCTCACTGCAACCTCAGCCTCCAGGGTTCAA...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR GCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTACAGTCATGGCTCACTaGAGCCTCAATCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFTVMAH*SLNLLG
Trigger: GCCCAGGAGATTGAGGCTGCAGTGAGCCATGACTGT...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR GCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTGGTCTCCCTGTGTGTTaGCCAGGCTGGACTCAAAAC +
Preference number: 2 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFGLPVC*PGWTQN
Trigger: GTTTTGAGTCCAGCCTGGGCAACACACAGGGAGACC...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR TCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTGGCAGGAAAATCACTTaGACCCTGGAGGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFGRKIT*TLEAEV
Trigger: AACCTCAGCCTCCAGGGTTCAAGTGATTTTCCTGCC...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR CCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAAGCATGGCTACATATCTaGAGTTGTCAACTCTGGATT +
Preference number: 2 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQAWLHI*SCQLWI
Trigger: AATCCAGAGTTGACAACTCCAGATATGTAGCCATGC...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
3UTR-3UTR CCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCGCAGCCTCAATCTCCTaGGCTCAAGTGATCCTCAAG +
Preference number: 2 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFAASIS*AQVILK
Trigger: CTTGAGGATCACTTGAGCCCAGGAGATTGAGGCTGC...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR TCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTCAAACTGCCTGTGTTTaGATTCTGCCTGTGCCTCAT +
Preference number: 2 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFQTACV*ILPVPH
Trigger: ATGAGGCACAGGCAGAATTCAAACACAGGCAGTTTG...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR CAA 90 bp AACCAAGTAGCTGCTACAATTAACCCTGCTCATGTTTATACTTTTTaGGAGAGACATCAGAGCATAGCAGTTAAGATCATGGTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: NQVAATINPAHVYTF*ERHQSIAVKIMVSE
Trigger: TTCAGAGACCATGATCTTAACTGCTATGCTCTGATGTCTCTCCAAAAAAGTATAAACATGAGCAGGGTTAATTGTAGCAGCTACTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR CCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTTTACCCTGGTTAGTCTaGTGGATCCAATACTTTTTG +
Preference number: 2 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFLPWLV*WIQYFL
Trigger: CAAAAAGTATTGGATCCACCAGACTAACCAGGGTAA...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR CAA 90 bp AATTTGGCCACCGTATTCACATCAAGGTTAAGTGACTTAACATCTTaGGGGATAAATAAGGTGCTGATTTTGTCTATAGCCATCAGTTTA +
Preference number: 2 (lower is better)
Translates to: NLATVFTSRLSDLTS*GINKVLILSIAISL
Trigger: TAAACTGATGGCTATAGACAAAATCAGCACCTTATTTATCCCCAAAGATGTTAAGTCACTTAACCTTGATGTGAATACGGTGGCCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR CCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTGCAAATTGTTTTAAGTaGTGTCTCTGCTTTTGCTTC +
Preference number: 2 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFANCFK*CLCFCF
Trigger: GAAGCAAAAGCAGAGACACCACTTAAAACAATTTGC...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATTCTCTATTGTAATATaGACTGTCATCTCTGTGCAG +
Preference number: 3 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQFSIVI*TVISVQ
Trigger: CTGCACAGAGATGACAGTCAATATTACAATAGAGAA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
3UTR-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTCTCTATTGTAATATaGACTGTCATCTCTGTGCAG +
Preference number: 3 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKFSIVI*TVISVQ
Trigger: CTGCACAGAGATGACAGTCAATATTACAATAGAGAA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
3UTR-3UTR CAA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTGGGTCTCCCTGTGTGTaGCCCAGGCTGGACTCAAAA +
Preference number: 3 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFGSPCV*PRLDSK
Trigger: TTTTGAGTCCAGCCTGGGCAACACACAGGGAGACCC...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR TCA 72 bp CCTGTGTTTGAATTCTGCCTGTGCCTCATAGCTATGTaGACTAACCTCTGTGCCTTTGTCTCATTTGTACAT +
Preference number: 3 (lower is better)
Translates to: PVFEFCLCLIAM*TNLCAFVSFVH
Trigger: ATGTACAAATGAGACAAAGGCACAGAGGTTAGTTCACATAGCTATGAGGCACAGGCAGAATTCAAACACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR CAA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCACACATTTCACTGTGTaGGCCAGGCTGGTGTCGAAC +
Preference number: 3 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFTHFTV*ARLVSN
Trigger: GTTCGACACCAGCCTGGCCAACACAGTGAAATGTGT...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR CAA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTTTGTCCGCTTCTAATTaGGCCACCGTATTCACATCA +
Preference number: 3 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFLSASN*ATVFTS
Trigger: TGATGTGAATACGGTGGCCAAATTAGAAGCGGACAA...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR CAA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTGTGCCTTTGTCTCATTaGTACATGGGGATTAGAAAT +
Preference number: 3 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFVPLSH*YMGIRN
Trigger: ATTTCTAATCCCCATGTACAAATGAGACAAAGGCAC...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR CAA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTCAAAAGCCTAACACATaGATGGACTTCAAGAATGTT +
Preference number: 3 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFQKPNT*MDFKNV
Trigger: AACATTCTTGAAGTCCATCAATGTGTTAGGCTTTTG...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR-3UTR CAA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTATCACTATCGGTTTCTaGATCACATCTGTTGTAGTT +
Preference number: 3 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFITIGF*ITSVVV
Trigger: AACTACAACAGATGTGATCAAGAAACCGATAGTGAT...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGGTACGGGCTCCGAGTaGTCCAGCTTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAGTGSE*SSFGPA
Trigger: AGCTGGTCCGAAGCTGGATCACTCGGAGCCCGTACC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR GCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCCTGCCTTGGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAPALAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACGCAGGAGGCCAAGGCAGG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTAGGCTGAGGTTGCAGTaGGCTGAGATAGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLARLRLQ*AEIGPL
Trigger: CAGTGGCCCTATCTCAGCTCACTGCAACCTCAGCCT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCACTTTGGATGTCTTTaGCTCTGCCCCCGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAHFGCL*LCPRSA
Trigger: TGCACTCCGGGGGCAGAGTCAAAGACATCCAAAGTG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTTGAACCCTGGAGGCTaGGGTTGCAGTGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALNPGG*GCSELR
Trigger: TCTCAGCTCACTGCAACCTCAGCCTCCAGGGTTCAA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGTACGGGCTCCGAGTaGTCCAGCTTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKGTGSE*SSFGPA
Trigger: AGCTGGTCCGAAGCTGGATCACTCGGAGCCCGTACC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGTACGGGCTCCGAGTaGTCCAGCTTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQGTGSE*SSFGPA
Trigger: AGCTGGTCCGAAGCTGGATCACTCGGAGCCCGTACC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTCCAGCTTTCCTTCCTaGCTGCTGGCCGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKSSFPS*LLAGLT
Trigger: GGTCAGCCCGGCCAGCAGTCAGGAAGGAAAGCTGGA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR CCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTATCCCCCTGCCACTGTaGAGGAAGGGAAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAIPLPL*RKGSFP
Trigger: TGGAAAACTTCCCTTCCTCCACAGTGGCAGGGGGAT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGCAGCCTCAATCTCCTaGGCTCAAGTGATCCTCAAG +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAAASIS*AQVILK
Trigger: CTTGAGGATCACTTGAGCCCAGGAGATTGAGGCTGC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTCCTCTGAGTCTCGGTaGACTGTTCTAGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLASSESR*TVLALF
Trigger: GAAGAGAGCTAGAACAGTTCACCGAGACTCAGAGGA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGTCATCTTCCTCCTCTaGGTCTCGGTGAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAVIFLL*VSVNCS
Trigger: AGAACAGTTCACCGAGACTCAGAGGAGGAAGATGAC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCAGATCTCCTTGCAGTaGAGCTGGGATTCCTACTTC +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAQISLQ*SWDSYF
Trigger: GAAGTAGGAATCCCAGCTTCACTGCAAGGAGATCTG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR GCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGGATACTCGGCCATCTaGCCCTCGAAAGAACTCATA +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAGYSAI*PSKELI
Trigger: TATGAGTTCTTTCGAGGGGCAGATGGCCGAGTATCC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR GCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGTGAAACGAGAGCTCTaGATACACTCTGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAVKREL*IHSALQ
Trigger: CTGCAGAGCAGAGTGTATGCAGAGCTCTCGTTTCAC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR GCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTTGCCCAGGCTGGAGTaGAATGACACAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALPRLE*NDTISA
Trigger: AGCTGAGATTGTGTCATTGCACTCCAGCCTGGGCAA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTAAGAATACTTCCCACTaGGGTACATCCCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAKNTSH*GTSPSA
Trigger: GGCTGATGGGGATGTACCCCAGTGGGAAGTATTCTT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCACATTTCACTGTGTTaGCCAGGCTGGTGTCGAACT +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAHISLC*PGWCRT
Trigger: AGTTCGACACCAGCCTGGCCAACACAGTGAAATGTG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAGCTCCTCCGAGTCCTaGGGCAGGTGCATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQSSSES*GRCMCF
Trigger: GAAGCACATGCACCTGCCCCAGGACTCGGAGGAGCT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAGCTCCTCCGAGTCCTaGGGCAGGTGCATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKSSSES*GRCMCF
Trigger: GAAGCACATGCACCTGCCCCAGGACTCGGAGGAGCT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCTCCATCAGAGTCACTaGAAAGCTTTGGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALHQSH*KALVTE
Trigger: CTCAGTCACCAAAGCTTTTCAGTGACTCTGATGGAG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGGAGGAGATGTGAGTTaGTTCTCCATCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAGGDVS*FSIRVT
Trigger: AGTGACTCTGATGGAGAATCAACTCACATCTCCTCC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTAAGCCCAGGGATTTaGGGCCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLSPGI*GQPGQH
Trigger: GTGTTGCCCAGGCTGGCCTCAAATCCCTGGGCTTAA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTGGGCTCAAGCCATTaGCCACCTCAAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLGSSH*PPQSAG
Trigger: CCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACTGGGCTCAAGCCATTaGCCACCTCAAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLGSSH*PPQSAG
Trigger: CCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTGGGGCAGGTGCATGTaGTTCAGAGCCAAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKWGRCM*FRAKAG
Trigger: TCCCGCTTTGGCTCTGAAGCACATGCACCTGCCCCA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATGGGGCAGGTGCATGTaGTTCAGAGCCAAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQWGRCM*FRAKAG
Trigger: TCCCGCTTTGGCTCTGAAGCACATGCACCTGCCCCA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAGCAACATCAGCTTCTaGTGGGTGCCCGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQSNISF*WVPVCS
Trigger: GCTGCACACGGGCACCCAGCAGAAGCTGATGTTGCT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAGCAACATCAGCTTCTaGTGGGTGCCCGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKSNISF*WVPVCS
Trigger: GCTGCACACGGGCACCCAGCAGAAGCTGATGTTGCT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTGGTGTCGAACTCCTaGGCTCAAGCCATTGCCCAC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLVSNS*AQAIAH
Trigger: GTGGGCAATGGCTTGAGCCCAGGAGTTCGACACCAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACTGGTGTCGAACTCCTaGGCTCAAGCCATTGCCCAC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLVSNS*AQAIAH
Trigger: GTGGGCAATGGCTTGAGCCCAGGAGTTCGACACCAG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAACATCAGCTTCTGCTaGGTGCCCGTGTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQNISFC*VPVCSS
Trigger: GGAGCTGCACACGGGCACCCAGCAGAAGCTGATGTT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAGCACAAGGTGGGGGTaGAAACACGGTGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQSTRWG*KHGVPG
Trigger: TCCAGGGACACCGTGTTTCCACCCCCACCTTGTGCT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCTTAATCCTTTCATGTaGTCTTTGTGGCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALNPFM*SLWQWD
Trigger: GTCCCACTGCCACAAAGATCACATGAAAGGATTAAG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCACTTTGGATGTCTTTaGCTCTGCCCCCGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKHFGCL*LCPRSA
Trigger: TGCACTCCGGGGGCAGAGTCAAAGACATCCAAAGTG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACACTTTGGATGTCTTTaGCTCTGCCCCCGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQHFGCL*LCPRSA
Trigger: TGCACTCCGGGGGCAGAGTCAAAGACATCCAAAGTG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGACTGATCCCGGACAGTaGCCAGCTGGTAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKTDPGQ*PAGKRV
Trigger: GACTCTCTTACCAGCTGGTCACTGTCCGGGATCAGT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGACAGTCATGGCTCACTaGAGCCTCAATCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKTVMAH*SLNLLG
Trigger: GCCCAGGAGATTGAGGCTGCAGTGAGCCATGACTGT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR GCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAATCACCCGCGCTTCGCTaGACGCGATGGGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQSPALR*TRWALS
Trigger: GCTCAGGGCCCATCGCGTGCAGCGAAGCGCGGGTGA...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGTCTCCCTGTGTGTTaGCCAGGCTGGACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQGLPVC*PGWTQN
Trigger: GTTTTGAGTCCAGCCTGGGCAACACACAGGGAGACC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAGTCCTGGGGCAGGTaGATGTGCTTCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQESWGR*MCFRAK
Trigger: TTTGGCTCTGAAGCACATGCACCTGCCCCAGGACTC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGAGTCCTGGGGCAGGTaGATGTGCTTCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKESWGR*MCFRAK
Trigger: TTTGGCTCTGAAGCACATGCACCTGCCCCAGGACTC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR CCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGTTATGTGTGTTGACTaGGAAGAATTCTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAVMCVD*EEFWEE
Trigger: CTCCTCCCAGAATTCTTCCCAGTCAACACACATAAC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGTCCTGCCACTTACTaGCTGTGTGACACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKGPATY*LCDTGQ
Trigger: TTGCCCAGTGTCACACAGCCAGTAAGTGGCAGGACC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378258.5
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGTCCTGCCACTTACTaGCTGTGTGACACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQGPATY*LCDTGQ
Trigger: TTGCCCAGTGTCACACAGCCAGTAAGTGGCAGGACC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378258.5
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAGCTGGCTGGAATCCTaGTCCTGCCACTTACTGGCT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKSWLES*SCHLLA
Trigger: AGCCAGTAAGTGGCAGGACCAGGATTCCAGCCAGCT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378258.5
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTGTGTTGCCCAGGCTaGACTCAAAACCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQVCCPG*TQNPEL
Trigger: GAGCTCAGGGTTTTGAGTCCAGCCTGGGCAACACAC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGGATCCAATACTTTTTaGTCGGATTGCCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAGSNTF*SDCHAA
Trigger: TGCTGCATGGCAATCCGACCAAAAAGTATTGGATCC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTAAAATTAGCCAGGTGTaGCACACACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAKISQV*HTPVIP
Trigger: TGGGATTACAGGTGTGTGCCACACCTGGCTAATTTT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAAACACGGTGTCCCTaGACCTCCTCCAACAGTGGT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQETRCP*TSSNSG
Trigger: ACCACTGTTGGAGGAGGTCCAGGGACACCGTGTTTC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAACCAAGAGCACAAGGTaGGGGTGGAAACACGGTGTC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQTKSTR*GWKHGV
Trigger: GACACCGTGTTTCCACCCCCACCTTGTGCTCTTGGT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTCCTTGCGCCAATCTaGAGTCTCCTGTGTACAGGA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLLAPI*SLLCTG
Trigger: TCCTGTACACAGGAGACTTCAGATTGGCGCAAGGAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAAAAGCTTTGGTGACTaGGATCCCCCTGCCACTGTG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKKSFGD*DPPATV
Trigger: CACAGTGGCAGGGGGATCTCAGTCACCAAAGCTTTT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAAAAGCTTTGGTGACTaGGATCCCCCTGCCACTGTG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQKSFGD*DPPATV
Trigger: CACAGTGGCAGGGGGATCTCAGTCACCAAAGCTTTT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGACTGAAAAGCTTTGGTaGCTGAGATCCCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKTEKLW*LRSPCH
Trigger: GTGGCAGGGGGATCTCAGTCACCAAAGCTTTTCAGT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAACTGAAAAGCTTTGGTaGCTGAGATCCCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQTEKLW*LRSPCH
Trigger: GTGGCAGGGGGATCTCAGTCACCAAAGCTTTTCAGT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGCAGGAAAATCACTTaGACCCTGGAGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKGRKIT*TLEAEV
Trigger: AACCTCAGCCTCCAGGGTTCAAGTGATTTTCCTGCC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR GCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGGGTATGGAACTTTGTaGCTTAAAGGTATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAGYGTL*LKGIGR
Trigger: TCTGCCAATACCTTTAAGGCACAAAGTTCCATACCC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGCATACACTCTGCTCTaGAGCATCCTGGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKAYTLL*SILGFV
Trigger: GACAAACCCCAGGATGCTGCAGAGCAGAGTGTATGC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCATACACTCTGCTCTaGAGCATCCTGGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQAYTLL*SILGFV
Trigger: GACAAACCCCAGGATGCTGCAGAGCAGAGTGTATGC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGAGCCCAGATCTCCTTaGAGTGAAGCTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKEPRSP*SEAGIP
Trigger: AGGAATCCCAGCTTCACTGCAAGGAGATCTGGGCTC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAGCCCAGATCTCCTTaGAGTGAAGCTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQEPRSP*SEAGIP
Trigger: AGGAATCCCAGCTTCACTGCAAGGAGATCTGGGCTC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTTGGTCGGATTGCCATaGAGCATCATGATAATGCAT +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALVGLP*SIMIMH
Trigger: ATGCATTATCATGATGCTGCATGGCAATCCGACCAA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGATCCCCCTGCCACTGTaGAGGAAGGGAAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKIPLPL*RKGSFP
Trigger: TGGAAAACTTCCCTTCCTCCACAGTGGCAGGGGGAT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAATCCCCCTGCCACTGTaGAGGAAGGGAAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQIPLPL*RKGSFP
Trigger: TGGAAAACTTCCCTTCCTCCACAGTGGCAGGGGGAT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTGTCCGCTTCTAATTTaGCCACCGTATTCACATCAA +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLACPLLI*PPYSHQ
Trigger: TTGATGTGAATACGGTGGCCAAATTAGAAGCGGACA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCAGTTTCAACCTCCTaGGCTCAATCCATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQAVSTS*AQSILP
Trigger: TGGCAGGATGGATTGAGCCCAGGAGGTTGAAACTGC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATCCTCTGAGTCTCGGTaGACTGTTCTAGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQSSESR*TVLALF
Trigger: GAAGAGAGCTAGAACAGTTCACCGAGACTCAGAGGA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTCCTCTGAGTCTCGGTaGACTGTTCTAGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKSSESR*TVLALF
Trigger: GAAGAGAGCTAGAACAGTTCACCGAGACTCAGAGGA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTCATCTTCCTCCTCTaGGTCTCGGTGAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQVIFLL*VSVNCS
Trigger: AGAACAGTTCACCGAGACTCAGAGGAGGAAGATGAC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGTCATCTTCCTCCTCTaGGTCTCGGTGAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKVIFLL*VSVNCS
Trigger: AGAACAGTTCACCGAGACTCAGAGGAGGAAGATGAC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTAATCTACAAAGTTTGTaGAACGAGAGCTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLANLQSL*NESSAY
Trigger: GTATGCAGAGCTCTCGTTTCACAAACTTTGTAGATT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACAGATCTCCTTGCAGTaGAGCTGGGATTCCTACTTC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQQISLQ*SWDSYF
Trigger: GAAGTAGGAATCCCAGCTTCACTGCAAGGAGATCTG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCAGATCTCCTTGCAGTaGAGCTGGGATTCCTACTTC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKQISLQ*SWDSYF
Trigger: GAAGTAGGAATCCCAGCTTCACTGCAAGGAGATCTG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATGGCTGTCCCAGCCTTaGCTTCCTTGTTCTGTTATG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQWLSQP*LPCSVM
Trigger: CATAACAGAACAAGGAAGTCAAGGCTGGGACAGCCA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTGGCTGTCCCAGCCTTaGCTTCCTTGTTCTGTTATG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKWLSQP*LPCSVM
Trigger: CATAACAGAACAAGGAAGTCAAGGCTGGGACAGCCA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCAGGAATATTCTCTTTaGTTGTTGGTCTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAQEYSL*LLVCSQ
Trigger: CTGACTACAGACCAACAATCAAAGAGAATATTCCTG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTCCCAAAGATCTCCTaGACACTGAGTACTAGTGGG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLPKIS*TLSTSG
Trigger: CCCACTAGTACTCAGTGTTCAGGAGATCTTTGGGAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAATACGCGCTTGTATGTaGTCAGGTGTGTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQIRACM*SGVSAL
Trigger: GAGTGCAGACACACCTGATCACATACAAGCGCGTAT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGATACTCGGCCATCTaGCCCTCGAAAGAACTCATA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKGYSAI*PSKELI
Trigger: TATGAGTTCTTTCGAGGGGCAGATGGCCGAGTATCC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGATACTCGGCCATCTaGCCCTCGAAAGAACTCATA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQGYSAI*PSKELI
Trigger: TATGAGTTCTTTCGAGGGGCAGATGGCCGAGTATCC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACTGAAAATATTCCTCTaGCTTGGGATGCCGGCATGC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLKIFL*LGMPAC
Trigger: GCATGCCGGCATCCCAAGGCAGAGGAATATTTTCAG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTGAAACGAGAGCTCTaGATACACTCTGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQVKREL*IHSALQ
Trigger: CTGCAGAGCAGAGTGTATGCAGAGCTCTCGTTTCAC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGTGAAACGAGAGCTCTaGATACACTCTGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKVKREL*IHSALQ
Trigger: CTGCAGAGCAGAGTGTATGCAGAGCTCTCGTTTCAC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAACTGAGCCCTGCCCAGTaGAAGGCTCATTCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQLSPAQ*KAHSRP
Trigger: TGGGCGGGAATGAGCCTTGCACTGGGCAGGGCTCAG...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR GCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTAAGATAATGTCAACATaGCAAGATCACCCAGTGAAC +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAKIMST*QDHPVN
Trigger: GTTCACTGGGTGATCTTGGCATGTTGACATTATCTT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACCTAGTGGGCCATTCTaGCTTCCAGTTTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQPSGPF*LPVCLC
Trigger: ACAGAGACAAACTGGAAGGCAGAATGGCCCACTAGG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTCTATGGAGATAGTTaGATACTCGGCCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQVYGDS*ILGHLP
Trigger: GGGCAGATGGCCGAGTATCCAACTATCTCCATAGAC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGTCTATGGAGATAGTTaGATACTCGGCCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKVYGDS*ILGHLP
Trigger: GGGCAGATGGCCGAGTATCCAACTATCTCCATAGAC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAATATTCCTCTGCCTTaGGATGCCGGCATGCATGGA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKNIPLP*DAGMHG
Trigger: TCCATGCATGCCGGCATCCCAAGGCAGAGGAATATT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTTGGCTCCGTACTTTaGGAAGACCGGCATAAAGGC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKFGSVL*EDRHKG
Trigger: GCCTTTATGCCGGTCTTCCCAAAGTACGGAGCCAAA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATTTGGCTCCGTACTTTaGGAAGACCGGCATAAAGGC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQFGSVL*EDRHKG
Trigger: GCCTTTATGCCGGTCTTCCCAAAGTACGGAGCCAAA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAAGAATACTTCCCACTaGGGTACATCCCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQKNTSH*GTSPSA
Trigger: GGCTGATGGGGATGTACCCCAGTGGGAAGTATTCTT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAAGAATACTTCCCACTaGGGTACATCCCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKKNTSH*GTSPSA
Trigger: GGCTGATGGGGATGTACCCCAGTGGGAAGTATTCTT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACACATTTCACTGTGTTaGCCAGGCTGGTGTCGAACT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQHISLC*PGWCRT
Trigger: AGTTCGACACCAGCCTGGCCAACACAGTGAAATGTG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCACATTTCACTGTGTTaGCCAGGCTGGTGTCGAACT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKHISLC*PGWCRT
Trigger: AGTTCGACACCAGCCTGGCCAACACAGTGAAATGTG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTGGCTAACATTTTGTaGAGACAGGGTCTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLANIL*RQGLPV
Trigger: CACAGGGAGACCCTGTCTCCACAAAATGTTAGCCAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGACCTCCTCCAACAGTaGTCCCTCACCATTGTTACT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKDLLQQ*SLTIVT
Trigger: AGTAACAATGGTGAGGGACCACTGTTGGAGGAGGTC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGACCTCCTCCAACAGTaGTCCCTCACCATTGTTACT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQDLLQQ*SLTIVT
Trigger: AGTAACAATGGTGAGGGACCACTGTTGGAGGAGGTC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTCCATCAGAGTCACTaGAAAGCTTTGGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLHQSH*KALVTE
Trigger: CTCAGTCACCAAAGCTTTTCAGTGACTCTGATGGAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACTCCATCAGAGTCACTaGAAAGCTTTGGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLHQSH*KALVTE
Trigger: CTCAGTCACCAAAGCTTTTCAGTGACTCTGATGGAG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGAGGAGATGTGAGTTaGTTCTCCATCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKGGDVS*FSIRVT
Trigger: AGTGACTCTGATGGAGAATCAACTCACATCTCCTCC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGAGGAGATGTGAGTTaGTTCTCCATCAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQGGDVS*FSIRVT
Trigger: AGTGACTCTGATGGAGAATCAACTCACATCTCCTCC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTTACATTTTGTTCCATaGGAGAGGCAGGAATATTCT +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALHFVP*ERQEYS
Trigger: AGAATATTCCTGCCTCTCTCATGGAACAAAATGTAA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR TCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATCCCCAGCCGACGAGGTaGGTGGGCTGCGGAACTGCG +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYPQPTR*VGCGTA
Trigger: CGCAGTTCCGCAGCCCACTCACCTCGTCGGCTGGGG...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATGCACGCGATGGGCCCTaGGCCCTGCCCAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYARDGP*ALPSAR
Trigger: CCTTGCACTGGGCAGGGCTCAGGGCCCATCGCGTGC...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTAAAAGCCTAACACATTaGTGGACTTCAAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAKSLTH*WTSRML
Trigger: CAACATTCTTGAAGTCCATCAATGTGTTAGGCTTTT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACAAACTGCCTGTGTTTaGATTCTGCCTGTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQQTACV*ILPVPH
Trigger: ATGAGGCACAGGCAGAATTCAAACACAGGCAGTTTG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGATCCACAGTAAGAGCTaGGAATCACCAATGGGACTC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKIHSKS*ESPMGL
Trigger: GAGTCCCATTGGTGATTCTCAGCTCTTACTGTGGAT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAGATCTCCTGAACACTaGGTACTAGTGGGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQRSPEH*VLVGLE
Trigger: TTCTAGGCCCACTAGTACTCAGTGTTCAGGAGATCT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTGCCCACCTCAAAGTaGTGGGATTACAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLPTSK*WDYKCE
Trigger: CTCACACTTGTAATCCCAGCACTTTGAGGTGGGCAA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATTGCCCACCTCAAAGTaGTGGGATTACAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLPTSK*WDYKCE
Trigger: CTCACACTTGTAATCCCAGCACTTTGAGGTGGGCAA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAAATGGGCCCTGAGCCCTaGCCAGTGCAAGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQMGPEP*PVQGSF
Trigger: GAATGAGCCTTGCACTGGGCAGGGCTCAGGGCCCAT...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATGCTCTGCAGCATCCTaGGGTTTGTCTCAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQCSAAS*GLSQFF
Trigger: GAAAAACTGAGACAAACCCCAGGATGCTGCAGAGCA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTGCTCTGCAGCATCCTaGGGTTTGTCTCAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKCSAAS*GLSQFF
Trigger: GAAAAACTGAGACAAACCCCAGGATGCTGCAGAGCA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCCACTGTTTCTCTCTTaGGAAGATAACAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAPLFLS*EDNKTV
Trigger: TACTGTTTTGTTATCTTCCCAAGAGAGAAACAGTGG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAACGTTGCCCATGTCTGTaGAGGTGCAGTCGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQRCPCL*RCSRGK
Trigger: CTTCCCGCGACTGCACCTCCACAGACATGGGCAACG...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATGCGCTGCCTCGCCATTaGGCGGCCGAACGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYALPRH*AAERSH
Trigger: GTGGCTGCGTTCGGCCGCCCAATGGCGAGGCAGCGC...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGACTCTCTTATGGCTGTaGTTCTCAATGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKTLLWL*FSMLAA
Trigger: TGCAGCCAGCATTGAGAACCACAGCCATAAGAGAGT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACTTAATCCTTTCATGTaGTCTTTGTGGCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLNPFM*SLWQWD
Trigger: GTCCCACTGCCACAAAGATCACATGAAAGGATTAAG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTTAATCCTTTCATGTaGTCTTTGTGGCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLNPFM*SLWQWD
Trigger: GTCCCACTGCCACAAAGATCACATGAAAGGATTAAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAAAACAAGCTCTGTATaGACTCTCTCCAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKKTSSV*TLSSPH
Trigger: GTGAGGACTGGAGAGAGTTCATACAGAGCTTGTTTT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAAAACAAGCTCTGTATaGACTCTCTCCAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQKTSSV*TLSSPH
Trigger: GTGAGGACTGGAGAGAGTTCATACAGAGCTTGTTTT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGAAAATACCTCAGGGTaGAAAGTTTCCGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKENTSG*KVSGYG
Trigger: TCCATACCCGGAAACTTTTCACCCTGAGGTATTTTC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAAAATACCTCAGGGTaGAAAGTTTCCGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQENTSG*KVSGYG
Trigger: TCCATACCCGGAAACTTTTCACCCTGAGGTATTTTC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACTCAGCTTCTGGAGTTaGGGGAACTTCAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLSFWS*GNFKIR
Trigger: TCTGATTTTGAAGTTCCCTCAACTCCAGAAGCTGAG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTCAGCTTCTGGAGTTaGGGGAACTTCAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLSFWS*GNFKIR
Trigger: TCTGATTTTGAAGTTCCCTCAACTCCAGAAGCTGAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCACTTACTGGCTGTGTaGCACTGGGCAACTAATTTA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKHLLAV*HWATNL
Trigger: TAAATTAGTTGCCCAGTGTCACACAGCCAGTAAGTG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378258.5
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACAAGATAAATGTGGCTaGCTGCTGAGTGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQQDKCG*LLSVFC
Trigger: ACAGAAGACACTCAGCAGTCAGCCACATTTATCTTG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACAACAATCTCTACGATaGAACAGGTTGTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQQQSLR*NRLLGE
Trigger: CTCCCCTAACAACCTGTTTCATCGTAGAGATTGTTG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGACAACCCTGCTGTTGTaGCTGCTAATTCGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKTTLLL*LLIRFF
Trigger: GAAGAAACGAATTAGCAGTCACAACAGCAGGGTTGT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAACAACCCTGCTGTTGTaGCTGCTAATTCGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQTTLLL*LLIRFF
Trigger: GAAGAAACGAATTAGCAGTCACAACAGCAGGGTTGT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378255.5
ENST00000396817.6
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCCTGTGTTTGAATTCTaGCTGTGCCTCATAGCTATG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKPVFEF*LCLIAM
Trigger: CATAGCTATGAGGCACAGGCAGAATTCAAACACAGG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTATGTGTGTTGACTaGGAAGAATTCTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQVMCVD*EEFWEE
Trigger: CTCCTCCCAGAATTCTTCCCAGTCAACACACATAAC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGTTATGTGTGTTGACTaGGAAGAATTCTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKVMCVD*EEFWEE
Trigger: CTCCTCCCAGAATTCTTCCCAGTCAACACACATAAC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATCTTCGCTGCACGCGATaGGCCCTGAGCCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYLRCTR*ALSPAQ
Trigger: CTGGGCAGGGCTCAGGGCCCATCGCGTGCAGCGAAG...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAGCAGAACTCTCTTATaGCTGTGGTTCTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKSRTLL*LWFSML
Trigger: CAGCATTGAGAACCACAGCCATAAGAGAGTTCTGCT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS-3UTR TCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAACACTTTGGATGTCTTTaGCTCTGCCCCCGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQHFGCL*LCPRSA
Trigger: TGCACTCCGGGGGCAGAGTCAAAGACATCCAAAGTG...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGTAATTTGCTCCACTaGAAATATTCCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKGNLLH*KYSSAL
Trigger: CAAGGCAGAGGAATATTTTCAGTGGAGCAAATTACC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGTAATTTGCTCCACTaGAAATATTCCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQGNLLH*KYSSAL
Trigger: CAAGGCAGAGGAATATTTTCAGTGGAGCAAATTACC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATTGTGCCAACTGGAATaGCATTTGGATATGCGTTCA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLCQLE*HLDMRS
Trigger: TGAACGCATATCCAAATGTCATTCCAGTTGGCACAA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTGTGCCAACTGGAATaGCATTTGGATATGCGTTCA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLCQLE*HLDMRS
Trigger: TGAACGCATATCCAAATGTCATTCCAGTTGGCACAA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTCTGTTATGTGTGTTaGCTGGGAAGAATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKFCYVC*LGRILG
Trigger: TCCCAGAATTCTTCCCAGTCAACACACATAACAGAA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATTCTGTTATGTGTGTTaGCTGGGAAGAATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQFCYVC*LGRILG
Trigger: TCCCAGAATTCTTCCCAGTCAACACACATAACAGAA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGGCAGAAAAATACTaGTGTATTGACTACGTGCTA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQGAEKY*CIDYVL
Trigger: TAGCACGTAGTCAATACATCAGTATTTTTCTGCCCC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGTATGGAACTTTGTaGCTTAAAGGTATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQGYGTL*LKGIGR
Trigger: TCTGCCAATACCTTTAAGGCACAAAGTTCCATACCC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGGTATGGAACTTTGTaGCTTAAAGGTATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKGYGTL*LKGIGR
Trigger: TCTGCCAATACCTTTAAGGCACAAAGTTCCATACCC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR GCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAAGTTCTAGGCGCCCGCTaGTTGGGTTTAAATCACCCG +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQVLGAR*LGLNHP
Trigger: CGGGTGATTTAAACCCAAGCAGCGGGCGCCTAGAAC...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR GCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTCAGTTTCCTCATCTaGACTCCAACCTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLSFLI*TPTFFS
Trigger: TGAAAAGAAGGTTGGAGTGCAGATGAGGAAACTGAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378258.5
ENST00000396817.6
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACTCAGTTTCCTCATCTaGACTCCAACCTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLSFLI*TPTFFS
Trigger: TGAAAAGAAGGTTGGAGTGCAGATGAGGAAACTGAG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378258.5
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACAGTGGTTTATACTTTaGCTCCGTACTTTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQQWFIL*LRTLGR
Trigger: TCTTCCCAAAGTACGGAGCCAAAGTATAAACCACTG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCAGTGGTTTATACTTTaGCTCCGTACTTTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKQWFIL*LRTLGR
Trigger: TCTTCCCAAAGTACGGAGCCAAAGTATAAACCACTG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATGGTACGGGCTCCGAGTaGTCCAGCTTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYGTGSE*SSFGPA
Trigger: AGCTGGTCCGAAGCTGGATCACTCGGAGCCCGTACC...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAATCTACAAAGTTTGTaGAACGAGAGCTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKNLQSL*NESSAY
Trigger: GTATGCAGAGCTCTCGTTTCACAAACTTTGTAGATT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAATCTACAAAGTTTGTaGAACGAGAGCTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQNLQSL*NESSAY
Trigger: GTATGCAGAGCTCTCGTTTCACAAACTTTGTAGATT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACAGGAATATTCTCTTTaGTTGTTGGTCTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQQEYSL*LLVCSQ
Trigger: CTGACTACAGACCAACAATCAAAGAGAATATTCCTG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCAGGAATATTCTCTTTaGTTGTTGGTCTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKQEYSL*LLVCSQ
Trigger: CTGACTACAGACCAACAATCAAAGAGAATATTCCTG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAAGACAGAGTGAGACCCTaGGTCTCGGTGAACTGTTCT +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQDRVRP*VSVNCS
Trigger: AGAACAGTTCACCGAGACTCAGGGTCTCACTCTGTC...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAGAGCTCATATTCATTaGCCCAGTCTTTTATGCCTT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQRAHIH*PSLLCL
Trigger: AAGGCATAAAAGACTGGGTCAATGAATATGAGCTCT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTACTTCAGAAATTTTTaGGCATTGTCACTCACCAGG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKYFRNF*ALSLTR
Trigger: CCTGGTGAGTGACAATGCTCAAAAATTTCTGAAGTA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAAACCACATGGTGGATaGCTTAATGCTGATTATGTG +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQKPHGG*LNADYV
Trigger: CACATAATCAGCATTAAGCCATCCACCATGTGGTTT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAAACCACATGGTGGATaGCTTAATGCTGATTATGTG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKKPHGG*LNADYV
Trigger: CACATAATCAGCATTAAGCCATCCACCATGTGGTTT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAACTGGAATGACATTTaGATATGCGTTCACAGGACA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKNWNDI*ICVHRT
Trigger: TGTCCTGTGAACGCATATCCAAATGTCATTCCAGTT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAACTGGAATGACATTTaGATATGCGTTCACAGGACA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQNWNDI*ICVHRT
Trigger: TGTCCTGTGAACGCATATCCAAATGTCATTCCAGTT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTACCCTGGTTAGTCTaGTGGATCCAATACTTTTTG +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLPWLV*WIQYFL
Trigger: CAAAAAGTATTGGATCCACCAGACTAACCAGGGTAA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTCACCATTGTTACTTaGAAATACGCGCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLTIVT*KYALVC
Trigger: ACATACAAGCGCGTATTTCCAAGTAACAATGGTGAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACTCACCATTGTTACTTaGAAATACGCGCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLTIVT*KYALVC
Trigger: ACATACAAGCGCGTATTTCCAAGTAACAATGGTGAG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR TCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCGGTACGGGCTCCGAGTaGTCCAGCTTCGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFGTGSE*SSFGPA
Trigger: AGCTGGTCCGAAGCTGGATCACTCGGAGCCCGTACC...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTACATTTTGTTCCATaGGAGAGGCAGGAATATTCT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLHFVP*ERQEYS
Trigger: AGAATATTCCTGCCTCTCTCATGGAACAAAATGTAA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR TCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATTACATTTTGTTCCATaGGAGAGGCAGGAATATTCT +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLHFVP*ERQEYS
Trigger: AGAATATTCCTGCCTCTCTCATGGAACAAAATGTAA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACCACTGTTTCTCTCTTaGGAAGATAACAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQPLFLS*EDNKTV
Trigger: TACTGTTTTGTTATCTTCCCAAGAGAGAAACAGTGG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCCACTGTTTCTCTCTTaGGAAGATAACAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKPLFLS*EDNKTV
Trigger: TACTGTTTTGTTATCTTCCCAAGAGAGAAACAGTGG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGCAAATTGTTTTAAGTaGTGTCTCTGCTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKANCFK*CLCFCF
Trigger: GAAGCAAAAGCAGAGACACCACTTAAAACAATTTGC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGCTGAGAATCACCAATaGGACTCAAAGATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKAENHQ*DSKILF
Trigger: AAAAAGAATCTTTGAGTCCCATTGGTGATTCTCAGC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS-3UTR GCA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATTTAAGTGGTGTCTCTaGTTTTGCTTCCATAATCTA +
Preference number: 4 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQFKWCL*FCFHNL
Trigger: TAGATTATGGAAGCAAAAGCAGAGACACCACTTAAA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTCATGTTTCCTCTTGTaGTTTATGATTCTTGACGTA +
Preference number: 4 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKSCFLL*FMILDV
Trigger: TACGTCAAGAATCATAAACCACAAGAGGAAACATGA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTACTGATCCCGGACAGTaGCCAGCTGGTAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFTDPGQ*PAGKRV
Trigger: GACTCTCTTACCAGCTGGTCACTGTCCGGGATCAGT...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATACTGATCCCGGACAGTaGCCAGCTGGTAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYTDPGQ*PAGKRV
Trigger: GACTCTCTTACCAGCTGGTCACTGTCCGGGATCAGT...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR GCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATCCATGTCTGTGGAGGTaGAGTCGCGGGAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYPCLWR*SRGKGN
Trigger: ATTTCCCTTCCCGCGACTGCACCTCCACAGACATGG...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATGACCCTGAGTCTCGGTaGACTGTTCTAGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYDPESR*TVLALF
Trigger: GAAGAGAGCTAGAACAGTTCACCGAGACTCAGGGTC...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR GCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCGGGGTCTTGCTTTGTTaGCCAGGCTGGGCACAATCA +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFGVLLC*PGWAQS
Trigger: TGATTGTGCCCAGCCTGGGCAACAAAGCAAGACCCC...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAACAGTGGTTTATACTTTaGCTCCGTACTTTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQQWFIL*LRTLGR
Trigger: TCTTCCCAAAGTACGGAGCCAAAGTATAAACCACTG...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATAGCAATGGACGTGGCTaGGGTGTAAAGACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYSNGRG*GVKTLV
Trigger: CACAAGGGTCTTTACACCCCAGCCACGTCCATTGCT...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
3UTR CAA 72 bp TTGTTACCCTGGTTAGTCTGGTGGATCCAATACTTTTaGGTCGGATTGCCATGCAGCATCATGATAATGCAT +
Preference number: 4 (lower is better)
Translates to: LLPWLVWWIQYF*VGLPCSIMIMH
Trigger: ATGCATTATCATGATGCTGCATGGCAATCCGACCAAAAAGTATTGGATCCACCAGACTAACCAGGGTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR GCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATGGATACTCGGCCATCTaGCCCTCGAAAGAACTCATA +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYGYSAI*PSKELI
Trigger: TATGAGTTCTTTCGAGGGGCAGATGGCCGAGTATCC...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR GCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCGAGCCCAGATCTCCTTaGAGTGAAGCTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFEPRSP*SEAGIP
Trigger: AGGAATCCCAGCTTCACTGCAAGGAGATCTGGGCTC...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR GCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATAACAAACACAGGTGTTaGTCTGGTAAGGCGTTGCCC +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYNKHRC*SGKALP
Trigger: GGGCAACGCCTTACCAGAGCAACACCTGTGTTTGTT...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR GCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATACCATGGCACCACACTaGTTCAAACTGAAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYTMAPH*FKLKGR
Trigger: CCTACCCTTCAGTTTGAAGCAGTGTGGTGCCATGGT...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTGTCTATGGAGATAGTTaGATACTCGGCCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFVYGDS*ILGHLP
Trigger: GGGCAGATGGCCGAGTATCCAACTATCTCCATAGAC...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATGTCTATGGAGATAGTTaGATACTCGGCCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYVYGDS*ILGHLP
Trigger: GGGCAGATGGCCGAGTATCCAACTATCTCCATAGAC...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAAAACTGGAATGACATTTaGATATGCGTTCACAGGACA +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQNWNDI*ICVHRT
Trigger: TGTCCTGTGAACGCATATCCAAATGTCATTCCAGTT...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTTTTGGCTCCGTACTTTaGGAAGACCGGCATAAAGGC +
Preference number: 4 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFFGSVL*EDRHKG
Trigger: GCCTTTATGCCGGTCTTCCCAAAGTACGGAGCCAAA...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATTTTGGCTCCGTACTTTaGGAAGACCGGCATAAAGGC +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYFGSVL*EDRHKG
Trigger: GCCTTTATGCCGGTCTTCCCAAAGTACGGAGCCAAA...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTAAGAATACTTCCCACTaGGGTACATCCCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFKNTSH*GTSPSA
Trigger: GGCTGATGGGGATGTACCCCAGTGGGAAGTATTCTT...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR CAA 72 bp TGGTTAGTCTGGTGGATCCAATACTTTTTGGTCGGATaGCCATGCAGCATCATGATAATGCATATCAAGTGT +
Preference number: 4 (lower is better)
Translates to: WLVWWIQYFLVG*PCSIMIMHIKC
Trigger: ACACTTGATATGCATTATCATGATGCTGCATGGCAATCCGACCAAAAAGTATTGGATCCACCAGACTAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCTGGCTGTCCCAGCCTTaGCTTCCTTGTTCTGTTATG +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFWLSQP*LPCSVM
Trigger: CATAACAGAACAAGGAAGTCAAGGCTGGGACAGCCA...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAATCTGTAACTTACTTTTaGACTGTGAAGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQSVTYF*TVKTIL
Trigger: GAGAATGGTCTTCACAGTTCAAAAGTAAGTTACAGA...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR GCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTTTGCCCACCTCAAAGTaGTGGGATTACAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFLPTSK*WDYKCE
Trigger: CTCACACTTGTAATCCCAGCACTTTGAGGTGGGCAA...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR GCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAAGAGGTATGTTTCATTTaGCACGTAGTAAATGATGGA +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQEVCFI*HVVNDG
Trigger: TCCATCATTTACTACGTGGCAAATGAAACATACCTC...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR GCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAAACACAGTATTCGCTTTaGATCTTTCGAACTAGCAAT +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQTQYSL*IFRTSN
Trigger: ATTGCTAGTTCGAAAGATGCAAAGCGAATACTGTGT...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATCTTAATCCTTTCATGTaGTCTTTGTGGCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYLNPFM*SLWQWD
Trigger: GTCCCACTGCCACAAAGATCACATGAAAGGATTAAG...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATAAAACAAGCTCTGTATaGACTCTCTCCAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYKTSSV*TLSSPH
Trigger: GTGAGGACTGGAGAGAGTTCATACAGAGCTTGTTTT...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCTGCTCTGCAGCATCCTaGGGTTTGTCTCAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFCSAAS*GLSQFF
Trigger: GAAAAACTGAGACAAACCCCAGGATGCTGCAGAGCA...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAAGGCAGAACTCTATTTTaGATCAACATGAAAGATACT +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQGRTLF*INMKDT
Trigger: AGTATCTTTCATGTTGATCCAAAATAGAGTTCTGCC...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAATGTCATGGAATATGTTaGAGAGGTATGTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQCHGIC*RGMFHL
Trigger: CAAATGAAACATACCTCTCCAACATATTCCATGACA...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCGCACACCACCATGTCTaGCTAACATTTTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFAHHHV*LTFCGD
Trigger: GTCTCCACAAAATGTTAGCCAGACATGGTGGTGTGC...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTGGTAATTTGCTCCACTaGAAATATTCCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFGNLLH*KYSSAL
Trigger: CAAGGCAGAGGAATATTTTCAGTGGAGCAAATTACC...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATGGTAATTTGCTCCACTaGAAATATTCCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYGNLLH*KYSSAL
Trigger: CAAGGCAGAGGAATATTTTCAGTGGAGCAAATTACC...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATTTGTGCCAACTGGAATaGCATTTGGATATGCGTTCA +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYLCQLE*HLDMRS
Trigger: TGAACGCATATCCAAATGTCATTCCAGTTGGCACAA...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCCTCAGCTTCTGGAGTTaGGGGAACTTCAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFLSFWS*GNFKIR
Trigger: TCTGATTTTGAAGTTCCCTCAACTCCAGAAGCTGAG...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCAATGTGGCTGACTGCTaGGTGTCTTCTGTGATACAT +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFNVADC*VSSVIH
Trigger: ATGTATCACAGAAGACACTCAGCAGTCAGCCACATT...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR GCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTGGGTATGGAACTTTGTaGCTTAAAGGTATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFGYGTL*LKGIGR
Trigger: TCTGCCAATACCTTTAAGGCACAAAGTTCCATACCC...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATGCATGGCTACATATCTaGAGTTGTCAACTCTGGATT +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYAWLHI*SCQLWI
Trigger: AATCCAGAGTTGACAACTCCAGATATGTAGCCATGC...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCCCCTGGTTAGTCTGGTaGATCCAATACTTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFPWLVW*IQYFLV
Trigger: GACCAAAAAGTATTGGATCCACCAGACTAACCAGGG...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378278.7
3UTR CAA 72 bp GCTGCTACAATTAACCCTGCTCATGTTTATACTTTTTaGGAGAGACATCAGAGCATAGCAGTTAAGATCATG +
Preference number: 4 (lower is better)
Translates to: AATINPAHVYTF*ERHQSIAVKIM
Trigger: CATGATCTTAACTGCTATGCTCTGATGTCTCTCCAAAAAAGTATAAACATGAGCAGGGTTAATTGTAGCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCTTGTGCCAACTGGAATaGCATTTGGATATGCGTTCA +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFLCQLE*HLDMRS
Trigger: TGAACGCATATCCAAATGTCATTCCAGTTGGCACAA...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTAATCTACAAAGTTTGTaGAACGAGAGCTCTGCATAC +
Preference number: 4 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFNLQSL*NESSAY
Trigger: GTATGCAGAGCTCTCGTTTCACAAACTTTGTAGATT...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCTTCTGTTATGTGTGTTaGCTGGGAAGAATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFFCYVC*LGRILG
Trigger: TCCCAGAATTCTTCCCAGTCAACACACATAACAGAA...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATTTGCCACGTAGTAAATaGTGGACATGCAAGGTTTAT +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYLPRSK*WTCKVY
Trigger: ATAAACCTTGCATGTCCATCATTTACTACGTGGCAA...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR TCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTCACATCAAGGTTAAGTaGCTTAACATCTTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFHIKVK*LNIFGD
Trigger: ATCCCCAAAGATGTTAAGTCACTTAACCTTGATGTG...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATAAACCACATGGTGGATaGCTTAATGCTGATTATGTG +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYKPHGG*LNADYV
Trigger: CACATAATCAGCATTAAGCCATCCACCATGTGGTTT...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CCA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATAGAAAGACACAAGCATaGCTACATATCTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: HILADLVLNIQLCPVESYRKTQA*LHIWSC
Trigger: ACAACTCCAGATATGTAGCCATGCTTGTGTCTTTCT...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
3UTR CAA 72 bp ACCGTATTCACATCAAGGTTAAGTGACTTAACATCTTaGGGGATAAATAAGGTGCTGATTTTGTCTATAGCC +
Preference number: 4 (lower is better)
Translates to: TVFTSRLSDLTS*GINKVLILSIA
Trigger: GGCTATAGACAAAATCAGCACCTTATTTATCCCCAAAGATGTTAAGTCACTTAACCTTGATGTGAATACGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTGGACTTCAAGAATGTTaGATGACTCACAGAATAACA +
Preference number: 4 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFGLQEC*MTHRIT
Trigger: TGTTATTCTGTGAGTCATTCAACATTCTTGAAGTCC...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCATGAACCTGTCAGGTTaGTGTAAGGTAACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFMNLSG*CKVTSL
Trigger: TAAGCTTGTTACCTTACACCAACCTGACAGGTTCAT...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR TCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCCTCAAAGGGTGGTTGTaGAAATTAAAGGAGTTCATA +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFLKGWL*KLKEFI
Trigger: TATGAACTCCTTTAATTTTCACAACCACCCTTTGAG...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCCCACTGTTTCTCTCTTaGGAAGATAACAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFPLFLS*EDNKTV
Trigger: TACTGTTTTGTTATCTTCCCAAGAGAGAAACAGTGG...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR GCA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCTACTATGGTAAGTACTaGCTAGAAATGCAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFYYGKY*LEMQRN
Trigger: ATTCCTTTGCATTTCTAGGCAGTACTTACCATAGTA...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS CCA 90 bp CTGACCGCGCCGCCACTTCCGGGAAGCCGCGCGCTGCCTCGCCATTaGGCGGCCGAACGCAGCCACGTCCAATCAGAGGAGTCCGGAGAC +
Preference number: 5 (lower is better)
Translates to: LTAPPLPGSRALPRH*AAERSHVQSEESGD
Trigger: GTCTCCGGACTCCTCTGATTGGACGTGGCTGCGTTCGGCCGCCCAATGGCGAGGCAGCGCGCGGCTTCCCGGAAGTGGCGGCGCGGTCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 90 bp CTGGGGCAGGGCCGCAGCAACATCAGCTTCTGCTGGGTGCCCGTGTaGAGCTCCTCCGAGTCCTGGGGCAGGTGCATGTGCTTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LGQGRSNISFCWVPV*SSSESWGRCMCFRA
Trigger: GGCTCTGAAGCACATGCACCTGCCCCAGGACTCGGAGGAGCTGCACACGGGCACCCAGCAGAAGCTGATGTTGCTGCGGCCCTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378241.5
ENST00000378255.5
ENST00000396817.6
ENST00000456122.1
CDS GCA 90 bp CGGGGGCAAAGTCAAGGAGCATCCGGTCGGGTTCTAGGCGCCCGCTaGTTGGGTTTAAATCACCCGCGCTTCGCTGCACGCGATGGGCCC +
Preference number: 5 (lower is better)
Translates to: RGQSQGASGRVLGAR*LGLNHPRFAARDGP
Trigger: GGGCCCATCGCGTGCAGCGAAGCGCGGGTGATTTAAACCCAAGCAGCGGGCGCCTAGAACCCGACCGGATGCTCCTTGACTTTGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 90 bp CGCCCGCTGCTTGGGTTTAAATCACCCGCGCTTCGCTGCACGCGATaGGCCCTGAGCCCTGCCCAGTGCAAGGCTCATTCCCGCCCAACA +
Preference number: 5 (lower is better)
Translates to: RPLLGFKSPALRCTR*ALSPAQCKAHSRPT
Trigger: TGTTGGGCGGGAATGAGCCTTGCACTGGGCAGGGCTCAGGGCCCATCGCGTGCAGCGAAGCGCGGGTGATTTAAACCCAAGCAGCGGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 90 bp GGTTCTAGGCGCCCGCTGCTTGGGTTTAAATCACCCGCGCTTCGCTaGACGCGATGGGCCCTGAGCCCTGCCCAGTGCAAGGCTCATTCC +
Preference number: 5 (lower is better)
Translates to: GSRRPLLGFKSPALR*TRWALSPAQCKAHS
Trigger: GGAATGAGCCTTGCACTGGGCAGGGCTCAGGGCCCATCGCGTGCAGCGAAGCGCGGGTGATTTAAACCCAAGCAGCGGGCGCCTAGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 90 bp TCACCCGCGCTTCGCTGCACGCGATGGGCCCTGAGCCCTGCCCAGTaGAAGGCTCATTCCCGCCCAACAAACACAGGTGTTGCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: SPALRCTRWALSPAQ*KAHSRPTNTGVALV
Trigger: TACCAGAGCAACACCTGTGTTTGTTGGGCGGGAATGAGCCTTGCACTGGGCAGGGCTCAGGGCCCATCGCGTGCAGCGAAGCGCGGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 90 bp TTAACTCAGAGTCTGGGGCAGGGCCGCAGCAACATCAGCTTCTGCTaGGTGCCCGTGTGCAGCTCCTCCGAGTCCTGGGGCAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: LTQSLGQGRSNISFC*VPVCSSSESWGRCM
Trigger: CATGCACCTGCCCCAGGACTCGGAGGAGCTGCACACGGGCACCCAGCAGAAGCTGATGTTGCTGCGGCCCTGCCCCAGACTCTGAGTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378241.5
ENST00000378255.5
ENST00000396817.6
ENST00000456122.1
CDS CCA 90 bp AACATCAGCTTCTGCTGGGTGCCCGTGTGCAGCTCCTCCGAGTCCTaGGGCAGGTGCATGTGCTTCAGAGCCAAAGCGGGAGACCAGCAC +
Preference number: 5 (lower is better)
Translates to: NISFCWVPVCSSSES*GRCMCFRAKAGDQH
Trigger: GTGCTGGTCTCCCGCTTTGGCTCTGAAGCACATGCACCTGCCCCAGGACTCGGAGGAGCTGCACACGGGCACCCAGCAGAAGCTGATGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378255.5
ENST00000396817.6
ENST00000456122.1
CDS TCA 90 bp TGCTTGGGTTTAAATCACCCGCGCTTCGCTGCACGCGATGGGCCCTaGGCCCTGCCCAGTGCAAGGCTCATTCCCGCCCAACAAACACAG +
Preference number: 5 (lower is better)
Translates to: CLGLNHPRFAARDGP*ALPSARLIPAQQTQ
Trigger: CTGTGTTTGTTGGGCGGGAATGAGCCTTGCACTGGGCAGGGCTCAGGGCCCATCGCGTGCAGCGAAGCGCGGGTGATTTAAACCCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 90 bp CCCTGCCCAGTGCAAGGCTCATTCCCGCCCAACAAACACAGGTGTTaGTCTGGTAAGGCGTTGCCCATGTCTGTGGAGGTGCAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: PCPVQGSFPPNKHRC*SGKALPMSVEVQSR
Trigger: CCGCGACTGCACCTCCACAGACATGGGCAACGCCTTACCAGAGCAACACCTGTGTTTGTTGGGCGGGAATGAGCCTTGCACTGGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 90 bp AACATCAGCTTCTGCTGGGTGCCCGTGTGCAGCTCCTCCGAGTCCTaGGGCAGGTGCATGTGCTTCAGAGCCAAAGCGGGAGACCAGCAA +
Preference number: 5 (lower is better)
Translates to: NISFCWVPVCSSSES*GRCMCFRAKAGDQQ
Trigger: TTGCTGGTCTCCCGCTTTGGCTCTGAAGCACATGCACCTGCCCCAGGACTCGGAGGAGCTGCACACGGGCACCCAGCAGAAGCTGATGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378241.5
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTAGTGATTCTCCTGCCTaGGCCTCCTGCGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLASDSPA*ASCVAG
Trigger: CCCAGCTACGCAGGAGGCCAAGGCAGGAGAATCACT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS GCA 90 bp TTCTGCTGGGTGCCCGTGTGCAGCTCCTCCGAGTCCTGGGGCAGGTaGATGTGCTTCAGAGCCAAAGCGGGAGACCAGCAAATTCGTTTC +
Preference number: 5 (lower is better)
Translates to: FCWVPVCSSSESWGR*MCFRAKAGDQQIRF
Trigger: GAAACGAATTTGCTGGTCTCCCGCTTTGGCTCTGAAGCACATGCACCTGCCCCAGGACTCGGAGGAGCTGCACACGGGCACCCAGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378241.5
CDS GCA 90 bp AACACAGGTGTTGCTCTGGTAAGGCGTTGCCCATGTCTGTGGAGGTaGAGTCGCGGGAAGGGAAATCGAAACTCCCAGAGCAGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: NTGVALVRRCPCLWR*SRGKGNRNSQSRWP
Trigger: GGGCCACCTGCTCTGGGAGTTTCGATTTCCCTTCCCGCGACTGCACCTCCACAGACATGGGCAACGCCTTACCAGAGCAACACCTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 90 bp TGGGTGCCCGTGTGCAGCTCCTCCGAGTCCTGGGGCAGGTGCATGTaGTTCAGAGCCAAAGCGGGAGACCAGCAAATTCGTTTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: WVPVCSSSESWGRCM*FRAKAGDQQIRFFQ
Trigger: TTGGAAGAAACGAATTTGCTGGTCTCCCGCTTTGGCTCTGAAGCACATGCACCTGCCCCAGGACTCGGAGGAGCTGCACACGGGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378241.5
CDS CCA 90 bp GCGGGCCCTCAGGTTCTCCCTATCGAAGCGGTCTATGGAGATAGTTaGATACTCGGCCATCTGCCCCTCGAAAGAACTCATAGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: AGPQVLPIEAVYGDS*ILGHLPLERTHSAA
Trigger: GGCGGCGCTATGAGTTCTTTCGAGGGGCAGATGGCCGAGTATCCAACTATCTCCATAGACCGCTTCGATAGGGAGAACCTGAGGGCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000378289.8
ENST00000396817.6
ENST00000418843.5
ENST00000456122.1
CDS GCA 90 bp TCCCTATCGAAGCGGTCTATGGAGATAGTTGGATACTCGGCCATCTaGCCCTCGAAAGAACTCATAGCGCCGCCGATCCCAGAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: SLSKRSMEIVGYSAI*PSKELIAPPIPESG
Trigger: CCCGGACTCTGGGATCGGCGGCGCTATGAGTTCTTTCGAGGGGCAGATGGCCGAGTATCCAACTATCTCCATAGACCGCTTCGATAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000378289.8
ENST00000396817.6
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTAAATATTCCTCTGCCTaGGGATGCCGGCATGCATGG +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAKYSSA*GCRHAW
Trigger: CCATGCATGCCGGCATCCCAAGGCAGAGGAATATTT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGCAGCATCCTGGGGTTaGTCTCAGTTTTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAAASWG*SQFFRL
Trigger: CAGCCTGAAAAACTGAGACAAACCCCAGGATGCTGC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTATCCCCATCAGCCTTTaGCAGGTGAAGTACAGAGCC +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAIPISL*QVKYRA
Trigger: GGCTCTGTACTTCACCTGCAAAAGGCTGATGGGGAT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS GCA 90 bp GCTCATTCCCGCCCAACAAACACAGGTGTTGCTCTGGTAAGGCGTTaGCCATGTCTGTGGAGGTGCAGTCGCGGGAAGGGAAATCGAAAC +
Preference number: 5 (lower is better)
Translates to: AHSRPTNTGVALVRR*PCLWRCSRGKGNRN
Trigger: GTTTCGATTTCCCTTCCCGCGACTGCACCTCCACAGACATGGGCAACGCCTTACCAGAGCAACACCTGTGTTTGTTGGGCGGGAATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 90 bp CCAACAAACACAGGTGTTGCTCTGGTAAGGCGTTGCCCATGTCTGTaGAGGTGCAGTCGCGGGAAGGGAAATCGAAACTCCCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PTNTGVALVRRCPCL*RCSRGKGNRNSQSR
Trigger: CCTGCTCTGGGAGTTTCGATTTCCCTTCCCGCGACTGCACCTCCACAGACATGGGCAACGCCTTACCAGAGCAACACCTGTGTTTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 90 bp CCTTCAAGCTATGCACACCATTTCAGTGCCACCAAGAGCACAAGGTaGGGGTGGAAACACGGTGTCCCTGGACCTCCTCCAACAGTGGTC +
Preference number: 5 (lower is better)
Translates to: PSSYAHHFSATKSTR*GWKHGVPGPPPTVV
Trigger: GACCACTGTTGGAGGAGGTCCAGGGACACCGTGTTTCCACCCCCACCTTGTGCTCTTGGTGGCACTGAAATGGTGTGCATAGCTTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378254.5
ENST00000378255.5
ENST00000418843.5
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAGTGATTCTCCTGCCTaGGCCTCCTGCGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQSDSPA*ASCVAG
Trigger: CCCAGCTACGCAGGAGGCCAAGGCAGGAGAATCACT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CAA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAACGCGCTGCCTCGCCATaGGGCGGCCGAACGCAGCCA +
Preference number: 5 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQRAASP*GGRTQP
Trigger: TGGCTGCGTTCGGCCGCCCAATGGCGAGGCAGCGCG...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTGTCTGGCTAACATTTaGTGGAGACAGGGTCTCCCT +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLACLANI*WRQGLP
Trigger: AGGGAGACCCTGTCTCCACAAAATGTTAGCCAGACA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTCCGGGTATGGAACTTaGTGCCTTAAAGGTATTGGC +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLASGYGT*CLKGIG
Trigger: GCCAATACCTTTAAGGCACAAAGTTCCATACCCGGA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTGGATCCAATACTTTTaGGTCGGATTGCCATGCAGC +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAWIQYF*VGLPCS
Trigger: GCTGCATGGCAATCCGACCAAAAAGTATTGGATCCA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCTAACCTCTGTGCCTTaGTCTCATTTGTACATGGGG +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALTSVP*SHLYMG
Trigger: CCCCATGTACAAATGAGACAAAGGCACAGAGGTTAG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGACACTTTGGATGTCTTaGACTCTGCCCCCGGAGTGC +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKTLWMS*TLPPEC
Trigger: GCACTCCGGGGGCAGAGTCAAAGACATCCAAAGTGT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAACACTTTGGATGTCTTaGACTCTGCCCCCGGAGTGC +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQTLWMS*TLPPEC
Trigger: GCACTCCGGGGGCAGAGTCAAAGACATCCAAAGTGT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGTTCTGTTATGTGTGTaGACTGGGAAGAATTCTGGG +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAVLLCV*TGKNSG
Trigger: CCCAGAATTCTTCCCAGTCAACACACATAACAGAAC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTGGGCAAATTACATTTaGTTCCATGAGAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAWANYI*FHERGR
Trigger: CCTGCCTCTCTCATGGAACAAAATGTAATTTGCCCA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTACTCAGCTTCTGGAGTaGAGGGAACTTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLATQLLE*RELQNQ
Trigger: CTGATTTTGAAGTTCCCTCAACTCCAGAAGCTGAGT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTTGTCCGCTTCTAATTaGGCCACCGTATTCACATCA +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALSASN*ATVFTS
Trigger: TGATGTGAATACGGTGGCCAAATTAGAAGCGGACAA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS CCA 90 bp CAAGGTGGGGGTGGAAACACGGTGTCCCTGGACCTCCTCCAACAGTaGTCCCTCACCATTGTTACTTGGAAATACGCGCTTGTATGTGAT +
Preference number: 5 (lower is better)
Translates to: QGGGGNTVSLDLLQQ*SLTIVTWKYALVCD
Trigger: ATCACATACAAGCGCGTATTTCCAAGTAACAATGGTGAGGGACCACTGTTGGAGGAGGTCCAGGGACACCGTGTTTCCACCCCCACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378254.5
ENST00000378255.5
ENST00000418843.5
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAAATATTCCTCTGCCTaGGGATGCCGGCATGCATGG +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKKYSSA*GCRHAW
Trigger: CCATGCATGCCGGCATCCCAAGGCAGAGGAATATTT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCTGATACTGCAGTCATaGAAAATACCTCAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALILQS*KIPQGE
Trigger: TTCACCCTGAGGTATTTTCAATGACTGCAGTATCAG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCAGCATCCTGGGGTTaGTCTCAGTTTTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQAASWG*SQFFRL
Trigger: CAGCCTGAAAAACTGAGACAAACCCCAGGATGCTGC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGCAGCATCCTGGGGTTaGTCTCAGTTTTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKAASWG*SQFFRL
Trigger: CAGCCTGAAAAACTGAGACAAACCCCAGGATGCTGC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAATCCCCATCAGCCTTTaGCAGGTGAAGTACAGAGCC +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQIPISL*QVKYRA
Trigger: GGCTCTGTACTTCACCTGCAAAAGGCTGATGGGGAT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGATCCCCATCAGCCTTTaGCAGGTGAAGTACAGAGCC +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKIPISL*QVKYRA
Trigger: GGCTCTGTACTTCACCTGCAAAAGGCTGATGGGGAT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAACACATTTCACTGTGTaGGCCAGGCTGGTGTCGAAC +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQTHFTV*ARLVSN
Trigger: GTTCGACACCAGCCTGGCCAACACAGTGAAATGTGT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGACACATTTCACTGTGTaGGCCAGGCTGGTGTCGAAC +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKTHFTV*ARLVSN
Trigger: GTTCGACACCAGCCTGGCCAACACAGTGAAATGTGT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS GCA 90 bp AGTGAGAGACAGAAGTGGGTTTCGGTCTGTCCTAGTGGGCCATTCTaGCTTCCAGTTTGTCTCTGTTCCCCTCCACTTCTCTTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SERQKWVSVCPSGPF*LPVCLCSPPLLFQL
Trigger: AAGCTGGAAGAGAAGTGGAGGGGAACAGAGACAAACTGGAAGGCAGAATGGCCCACTAGGACAGACCGAAACCCACTTCTGTCTCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378255.5
ENST00000396817.6
ENST00000456122.1
CDS CCA 90 bp GTGTCCCTGGACCTCCTCCAACAGTGGTCCCTCACCATTGTTACTTaGAAATACGCGCTTGTATGTGATCAGGTGTGTCTGCACTCCAAC +
Preference number: 5 (lower is better)
Translates to: VSLDLLQQWSLTIVT*KYALVCDQVCLHSN
Trigger: GTTGGAGTGCAGACACACCTGATCACATACAAGCGCGTATTTCCAAGTAACAATGGTGAGGGACCACTGTTGGAGGAGGTCCAGGGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378254.5
ENST00000378255.5
ENST00000418843.5
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGGAGGAGATGTGAGTaGATTCTCCATCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKGRRCE*ILHQSH
Trigger: GTGACTCTGATGGAGAATCAACTCACATCTCCTCCC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGGAGGAGATGTGAGTaGATTCTCCATCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQGRRCE*ILHQSH
Trigger: GTGACTCTGATGGAGAATCAACTCACATCTCCTCCC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTCTATACTCTCACCAGTaGCCAGCTTCTCATATAAAT +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLALYSHQ*PASHIN
Trigger: ATTTATATGAGAAGCTGGCAACTGGTGAGAGTATAG...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTGTGCCTTTGTCTCATTaGTACATGGGGATTAGAAAT +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAVPLSH*YMGIRN
Trigger: ATTTCTAATCCCCATGTACAAATGAGACAAAGGCAC...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAGTGGTCCCTCACCATaGTTACTTGGAAATACGCGC +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKSGPSP*LLGNTR
Trigger: GCGCGTATTTCCAAGTAACAATGGTGAGGGACCACT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACCAGTGGTTTATACTTaGGCTCCGTACTTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQPVVYT*APYFGK
Trigger: CTTCCCAAAGTACGGAGCCAAAGTATAAACCACTGG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCCAGTGGTTTATACTTaGGCTCCGTACTTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKPVVYT*APYFGK
Trigger: CTTCCCAAAGTACGGAGCCAAAGTATAAACCACTGG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTCCGGGTATGGAACTTaGTGCCTTAAAGGTATTGGC +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKSGYGT*CLKGIG
Trigger: GCCAATACCTTTAAGGCACAAAGTTCCATACCCGGA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATCCGGGTATGGAACTTaGTGCCTTAAAGGTATTGGC +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQSGYGT*CLKGIG
Trigger: GCCAATACCTTTAAGGCACAAAGTTCCATACCCGGA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTGGCTGTCCCAGCCTaGACTTCCTTGTTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLAVPA*TSLFCY
Trigger: ATAACAGAACAAGGAAGTCAAGGCTGGGACAGCCAA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATTGGCTGTCCCAGCCTaGACTTCCTTGTTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLAVPA*TSLFCY
Trigger: ATAACAGAACAAGGAAGTCAAGGCTGGGACAGCCAA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCAAAACAGTATCAGATaGGCTGTCCCAGCCTTGACT +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKQNSIR*AVPALT
Trigger: AGTCAAGGCTGGGACAGCCAATCTGATACTGTTTTG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACAAAACAGTATCAGATaGGCTGTCCCAGCCTTGACT +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQQNSIR*AVPALT
Trigger: AGTCAAGGCTGGGACAGCCAATCTGATACTGTTTTG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTTTCTCTATTGTAATATaGACTGTCATCTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAFSIVI*TVISVQ
Trigger: CTGCACAGAGATGACAGTCAATATTACAATAGAGAA...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378246.6
ENST00000378278.7
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGATAAACCTTCAAGCTTaGTGGCAGTGGGACAGGAAG +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKINLQA*WQWDRK
Trigger: CTTCCTGTCCCACTGCCACAAAGCTTGAAGGTTTAT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378249.5
CDS-3UTR CAA 90 bp TGGGCTCAAGTGATCCTCAAGGGCCTCCAGAGTAGCCCACCACCATGCCTGGCTATCACTATCGGTTTCTaGATCACATCTGTTGTAGTT +
Preference number: 5 (lower is better)
Translates to: WAQVILKGLQSSPPPCLAITIGF*ITSVVV
Trigger: AACTACAACAGATGTGATCAAGAAACCGATAGTGAT...AGCCAGGCATGGTGGTGGGCTACTCTGGAGGCCCTTGAGGATCACTTGAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTTGGAAATACGCGCTaGTATGTGATCAGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLGNTR*YVIRCV
Trigger: GACACACCTGATCACATACAAGCGCGTATTTCCAAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGTTCTGTTATGTGTGTaGACTGGGAAGAATTCTGGG +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKVLLCV*TGKNSG
Trigger: CCCAGAATTCTTCCCAGTCAACACACATAACAGAAC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTTCTGTTATGTGTGTaGACTGGGAAGAATTCTGGG +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQVLLCV*TGKNSG
Trigger: CCCAGAATTCTTCCCAGTCAACACACATAACAGAAC...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATGGGCAAATTACATTTaGTTCCATGAGAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQWANYI*FHERGR
Trigger: CCTGCCTCTCTCATGGAACAAAATGTAATTTGCCCA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTGGGCAAATTACATTTaGTTCCATGAGAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKWANYI*FHERGR
Trigger: CCTGCCTCTCTCATGGAACAAAATGTAATTTGCCCA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGACTCAGCTTCTGGAGTaGAGGGAACTTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKTQLLE*RELQNQ
Trigger: CTGATTTTGAAGTTCCCTCAACTCCAGAAGCTGAGT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAACTCAGCTTCTGGAGTaGAGGGAACTTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQTQLLE*RELQNQ
Trigger: CTGATTTTGAAGTTCCCTCAACTCCAGAAGCTGAGT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCCTCACCATTGTTACTaGGAAATACGCGCTTGTATG +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKPHHCY*EIRACM
Trigger: CATACAAGCGCGTATTTCCAAGTAACAATGGTGAGG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACCTCACCATTGTTACTaGGAAATACGCGCTTGTATG +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQPHHCY*EIRACM
Trigger: CATACAAGCGCGTATTTCCAAGTAACAATGGTGAGG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378254.5
ENST00000378255.5
CDS TCA 90 bp AAGAATTCTGGGAGGAGATGTGAGTTGATTCTCCATCAGAGTCACTaGAAAGCTTTGGTGACTGAGATCCCCCTGCCACTGTGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KNSGRRCELILHQSH*KALVTEIPLPLWRK
Trigger: CTTCCTCCACAGTGGCAGGGGGATCTCAGTCACCAAAGCTTTTCAGTGACTCTGATGGAGAATCAACTCACATCTCCTCCCAGAATTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
ENST00000492201.5
CDS CCA 90 bp GCTCTCTTCAGTTTTCCCAGTGGTTTATACTTTGGCTCCGTACTTTaGGAAGACCGGCATAAAGGCTTTAAGCCCTTTCGAAGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: ALFSFPSGLYFGSVL*EDRHKGFKPFRRPH
Trigger: GTGAGGCCTTCGAAAGGGCTTAAAGCCTTTATGCCGGTCTTCCCAAAGTACGGAGCCAAAGTATAAACCACTGGGAAAACTGAAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492201.5
CDS-3UTR CAA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAAACACTTTGGATGTCTTaGACTCTGCCCCCGGAGTGC +
Preference number: 5 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQTLWMS*TLPPEC
Trigger: GCACTCCGGGGGCAGAGTCAAAGACATCCAAAGTGT...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATGTGCCTTAAAGGTATaGGCAGAGGATCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQCALKV*AEDHQR
Trigger: TCTTTGATGATCCTCTGCCAATACCTTTAAGGCACA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGTGTGCCTTAAAGGTATaGGCAGAGGATCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKCALKV*AEDHQR
Trigger: TCTTTGATGATCCTCTGCCAATACCTTTAAGGCACA...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACTGATACTGCAGTCATaGAAAATACCTCAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLILQS*KIPQGE
Trigger: TTCACCCTGAGGTATTTTCAATGACTGCAGTATCAG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTGATACTGCAGTCATaGAAAATACCTCAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLILQS*KIPQGE
Trigger: TTCACCCTGAGGTATTTTCAATGACTGCAGTATCAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAATACTTTTTGGTCGGATaGCCATGCAGCATCATGATA +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQYFLVG*PCSIMI
Trigger: TATCATGATGCTGCATGGCAATCCGACCAAAAAGTA...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS TCA 90 bp AACAGTGTCTTGTCCTGGTCCCAACAGCCAGAGTGGAAAACCTCATaGTCCATGGGCATTTGTAAAAGAACCAAGAAGAGCCTTGCCTCA +
Preference number: 5 (lower is better)
Translates to: NSVLSWSQQPEWKTS*SMGICKRTKKSLAS
Trigger: TGAGGCAAGGCTCTTCTTGGTTCTTTTACAAATGCCCATGGATCATGAGGTTTTCCACTCTGGCTGTTGGGACCAGGACAAGACACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489845.1
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAACTATACTCTCACCAGTaGCCAGCTTCTCATATAAAT +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQLYSHQ*PASHIN
Trigger: ATTTATATGAGAAGCTGGCAACTGGTGAGAGTATAG...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCTATACTCTCACCAGTaGCCAGCTTCTCATATAAAT +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKLYSHQ*PASHIN
Trigger: ATTTATATGAGAAGCTGGCAACTGGTGAGAGTATAG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAAGTGGTTGCTCTAGGTaGAAACGCTTTGAATTCTTA +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQSGCSR*KRFEFL
Trigger: TAAGAATTCAAAGCGTTTCAACCTAGAGCAACCACT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGAGTGGTTGCTCTAGGTaGAAACGCTTTGAATTCTTA +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKSGCSR*KRFEFL
Trigger: TAAGAATTCAAAGCGTTTCAACCTAGAGCAACCACT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATCTAGGCGCCCGCTGCTaGGGTTTAAATCACCCGCGC +
Preference number: 5 (lower is better)
Translates to: HILADLVLNIQLCPVESYLGARC*GLNHPR
Trigger: GCGCGGGTGATTTAAACCCAAGCAGCGGGCGCCTAG...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGGTCCAAGAAGGTCAGTaGCTTATGTTTAACAAATCC +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKVQEGQ*LMFNKS
Trigger: GGATTTGTTAAACATAAGCAACTGACCTTCTTGGAC...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGCAAAAGCCTAACACATaGATGGACTTCAAGAATGTT +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKQKPNT*MDFKNV
Trigger: AACATTCTTGAAGTCCATCAATGTGTTAGGCTTTTG...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGACTTCATGTTTCCTCTaGTGGTTTATGATTCTTGAC +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKTSCFL*WFMILD
Trigger: GTCAAGAATCATAAACCACAAGAGGAAACATGAAGT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp GTGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAATACATCTTGGCATTTaGAAACTTCATGTTTCGGCT +
Preference number: 5 (lower is better)
Translates to: VSNSWAQAIAHLKVLGLQIHLGI*KLHVSA
Trigger: AGCCGAAACATGAAGTTTCAAAATGCCAAGATGTAT...TTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp TGTCGAACTCCTGGGCTCAAGCCATTGCCCACCTCAAAGTGCTGGGATTACAAGATACTTCAGAAATTTTaGAGCATTGTCACTCACCAG +
Preference number: 5 (lower is better)
Translates to: CRTPGLKPLPTSKCWDYKILQKF*SIVTHQ
Trigger: CTGGTGAGTGACAATGCTCAAAAATTTCTGAAGTAT...CTTGTAATCCCAGCACTTTGAGGTGGGCAATGGCTTGAGCCCAGGAGTTCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAACCAGTGGTTTATACTTaGGCTCCGTACTTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQPVVYT*APYFGK
Trigger: CTTCCCAAAGTACGGAGCCAAAGTATAAACCACTGG...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CAA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATTGCTCTGGTAAGGCGTaGCCCATGTCTGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: HILADLVLNIQLCPVESYCSGKA*PMSVEV
Trigger: CACCTCCACAGACATGGGCAACGCCTTACCAGAGCA...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 90 bp CTGTTGGATTCTTCACAATCTACAAAGTTTGTGAAACGAGAGCTCTaGATACACTCTGCTCTGCAGCATCCTGGGGTTTGTCTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: LLDSSQSTKFVKREL*IHSALQHPGVCLSF
Trigger: AAAACTGAGACAAACCCCAGGATGCTGCAGAGCAGAGTGTATGCAGAGCTCTCGTTTCACAAACTTTGTAGATTGTGAAGAATCCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
ENST00000492201.5
CDS TCA 90 bp TCAGGCTGCTTTTCTGATACTGCAGTCATTGAAAATACCTCAGGGTaGAAAGTTTCCGGGTATGGAACTTTGTGCCTTAAAGGTATTGGC +
Preference number: 5 (lower is better)
Translates to: SGCFSDTAVIENTSG*KVSGYGTLCLKGIG
Trigger: GCCAATACCTTTAAGGCACAAAGTTCCATACCCGGAAACTTTTCACCCTGAGGTATTTTCAATGACTGCAGTATCAGAAAAGCAGCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
ENST00000489845.1
ENST00000492201.5
CDS CCA 90 bp GCTCTCTTCAGTTTTCCCAGTGGTTTATACTTTGGCTCCGTACTTTaGGAAGACCGGCATAAAGGCTTTAAGATTTCGACAACTTTATCC +
Preference number: 5 (lower is better)
Translates to: ALFSFPSGLYFGSVL*EDRHKGFKISTTLS
Trigger: GGATAAAGTTGTCGAAATCTTAAAGCCTTTATGCCGGTCTTCCCAAAGTACGGAGCCAAAGTATAAACCACTGGGAAAACTGAAGAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000378289.8
ENST00000396817.6
CDS-3UTR CAA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTGGGAGGAGATGTGAGTaGATTCTCCATCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFGRRCE*ILHQSH
Trigger: GTGACTCTGATGGAGAATCAACTCACATCTCCTCCC...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATGAGAAATTGAGTACCTaGCCCAAGGTCACACAGGTC +
Preference number: 5 (lower is better)
Translates to: HILADLVLNIQLCPVESYEKLST*PKVTQV
Trigger: GACCTGTGTGACCTTGGGCAAGGTACTCAATTTCTC...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CAA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAAATTATTGTAGAGAAATaGAGTACCTTGCCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQIIVEK*STLPKV
Trigger: GACCTTGGGCAAGGTACTCAATTTCTCTACAATAAT...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CAA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTCCAAACTGCCTGTGTTaGAATTCTGCCTGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFPNCLC*NSACAS
Trigger: TGAGGCACAGGCAGAATTCAAACACAGGCAGTTTGG...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS GCA 90 bp GCTATACTCTCACCAGTTGCCAGCTTCTCATATAAATATTGTAAATaGTCTCGTTTAGGTAACTCAGCTTCTGGAGTTGAGGGAACTTCA +
Preference number: 5 (lower is better)
Translates to: AILSPVASFSYKYCK*SRLGNSASGVEGTS
Trigger: TGAAGTTCCCTCAACTCCAGAAGCTGAGTTACCTAAACGAGAGCATTTACAATATTTATATGAGAAGCTGGCAACTGGTGAGAGTATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS CCA 90 bp CTCCTTTCTCCAAACCACATGGTGGATGGCTTAATGCTGATTATGTaGAGTGGAATTCTATTTCTGGAAGTAATTCCACAGGGTAATTTG +
Preference number: 5 (lower is better)
Translates to: LLSPNHMVDGLMLIM*SGILFLEVIPQGNL
Trigger: CAAATTACCCTGTGGAATTACTTCCAGAAATAGAATTCCACTCCACATAATCAGCATTAAGCCATCCACCATGTGGTTTGGAGAAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000378289.8
ENST00000396817.6
CDS-3UTR CAA 90 bp GAGTACCTTGCCCAAGGTCACACAGGTCACATAGTAATAAGAACCGAGATTCAATGGCAGAACTCTATTTaGGATCAACATGAAAGATAC +
Preference number: 5 (lower is better)
Translates to: EYLAQGHTGHIVIRTEIQWQNSI*DQHERY
Trigger: GTATCTTTCATGTTGATCCAAAATAGAGTTCTGCCA...TTGAATCTCGGTTCTTATTACTATGTGACCTGTGTGACCTTGGGCAAGGTACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 90 bp TACATTTTGTTCCATGAGAGAGGCAGGAATATTCTCTTTGATTGTTaGTCTGTAGTCAGCTTTGTCCAAGGAAGTAATATCCCCACTGTT +
Preference number: 5 (lower is better)
Translates to: YILFHERGRNILFDC*SVVSFVQGSNIPTV
Trigger: AACAGTGGGGATATTACTTCCTTGGACAAAGCTGACTACAGACCAACAATCAAAGAGAATATTCCTGCCTCTCTCATGGAACAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCCCAGTGGTTTATACTTaGGCTCCGTACTTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFPVVYT*APYFGK
Trigger: CTTCCCAAAGTACGGAGCCAAAGTATAAACCACTGG...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCTCCGGGTATGGAACTTaGTGCCTTAAAGGTATTGGC +
Preference number: 5 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFSGYGT*CLKGIG
Trigger: GCCAATACCTTTAAGGCACAAAGTTCCATACCCGGA...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCACTCAGCTTCTGGAGTaGAGGGAACTTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFTQLLE*RELQNQ
Trigger: CTGATTTTGAAGTTCCCTCAACTCCAGAAGCTGAGT...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS-3UTR CAA 90 bp CATATACTTGCAGATTTAGTCCTTAACATTCAGTTGTGTCCTGTAGAGAGCTATGTCCTTAACATTCAGTaGTGTCCTGTAGAGAGCTAT +
Preference number: 5 (lower is better)
Translates to: HILADLVLNIQLCPVESYVLNIQ*CPVESY
Trigger: ATAGCTCTCTACAGGACACAACTGAATGTTAAGGAC...ATAGCTCTCTACAGGACACAACTGAATGTTAAGGACTAAATCTGCAAGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS-3UTR CAA 90 bp GATCACCCAGTGAACTTTTTAAAGTATTTAATCTTCGGCTTCAGGCAGACTTTTCAGAGCTCATATTCATaGACCCAGTCTTTTATGCCT +
Preference number: 5 (lower is better)
Translates to: DHPVNFLKYLIFGFRQTFQSSYS*TQSFMP
Trigger: AGGCATAAAAGACTGGGTCAATGAATATGAGCTCTG...AAAAGTCTGCCTGAAGCCGAAGATTAAATACTTTAAAAAGTTCACTGGGTGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS CCA 90 bp AATTACATTTGTTTTTCTGCTCCTTTCTCCAAACCACATGGTGGATaGCTTAATGCTGATTATGTGGAGTGGAATTCTATTTCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: NYICFSAPFSKPHGG*LNADYVEWNSISGS
Trigger: ACTTCCAGAAATAGAATTCCACTCCACATAATCAGCATTAAGCCATCCACCATGTGGTTTGGAGAAAGGAGCAGAAAAACAAATGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000378289.8
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCCATTTGATACTACACTaGATCTTGGCCAAAAGGCCA +
Preference number: 5 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFHLILH*ILAKRP
Trigger: TGGCCTTTTGGCCAAGATCAAGTGTAGTATCAAATG...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS CCA 90 bp TGTCACATCTTTATCTCTGCTTTTCAAATCAGAGTAAGTATCCTTTaGGCAAATTACATTTTGTTCCATGAGAGAGGCAGGAATATTCTC +
Preference number: 5 (lower is better)
Translates to: CHIFISAFQIRVSIL*ANYILFHERGRNIL
Trigger: GAGAATATTCCTGCCTCTCTCATGGAACAAAATGTAATTTGCCCAAAGGATACTTACTCTGATTTGAAAAGCAGAGATAAAGATGTGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS-3UTR CAA 90 bp GTGGTGTGTTCTATAAATGTCAATTTAATCCAGTCGGCTTATGATTTTCAGTTCGTTTACAGGCATTTTTaGAACAACCACTTTCGATCA +
Preference number: 5 (lower is better)
Translates to: VVCSINVNLIQSAYDFQFVYRHF*NNHFRS
Trigger: TGATCGAAAGTGGTTGTTCAAAAAATGCCTGTAAAC...GAACTGAAAATCATAAGCCGACTGGATTAAATTGACATTTATAGAACACACCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378278.7
CDS CAA 90 bp CCTGACCGCGCCGCCACTTCCGGGAAGCCGCGCGCTGCCTCGCCATaGGGCGGCCGAACGCAGCCACGTCCAATCAGAGGAGTCCGGAGA +
Preference number: 6 (lower is better)
Translates to: PDRAATSGKPRAASP*GGRTQPRPIRGVRR
Trigger: TCTCCGGACTCCTCTGATTGGACGTGGCTGCGTTCGGCCGCCCAATGGCGAGGCAGCGCGCGGCTTCCCGGAAGTGGCGGCGCGGTCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 72 bp CCGCCACTTCCGGGAAGCCGCGCGCTGCCTCGCCATTaGGCGGCCGAACGCAGCCACGTCCAATCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: PPLPGSRALPRH*AAERSHVQSEE
Trigger: CTCCTCTGATTGGACGTGGCTGCGTTCGGCCGCCCAATGGCGAGGCAGCGCGCGGCTTCCCGGAAGTGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CAA 72 bp GCCGCCACTTCCGGGAAGCCGCGCGCTGCCTCGCCATaGGGCGGCCGAACGCAGCCACGTCCAATCAGAGGA +
Preference number: 6 (lower is better)
Translates to: AATSGKPRAASP*GGRTQPRPIRG
Trigger: TCCTCTGATTGGACGTGGCTGCGTTCGGCCGCCCAATGGCGAGGCAGCGCGCGGCTTCCCGGAAGTGGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 72 bp AGTCTGGGGCAGGGCCGCAGCAACATCAGCTTCTGCTaGGTGCCCGTGTGCAGCTCCTCCGAGTCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: SLGQGRSNISFC*VPVCSSSESWG
Trigger: GCCCCAGGACTCGGAGGAGCTGCACACGGGCACCCAGCAGAAGCTGATGTTGCTGCGGCCCTGCCCCAGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378241.5
ENST00000378255.5
ENST00000396817.6
ENST00000456122.1
CDS GCA 72 bp ACCCGCGCTTCGCTGCACGCGATGGGCCCTGAGCCCTaGCCAGTGCAAGGCTCATTCCCGCCCAACAAACAC +
Preference number: 6 (lower is better)
Translates to: TRASLHAMGPEP*PVQGSFPPNKH
Trigger: GTGTTTGTTGGGCGGGAATGAGCCTTGCACTGGGCAGGGCTCAGGGCCCATCGCGTGCAGCGAAGCGCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 72 bp CGCCCGCTGCTTGGGTTTAAATCACCCGCGCTTCGCTaGACGCGATGGGCCCTGAGCCCTGCCCAGTGCAAG +
Preference number: 6 (lower is better)
Translates to: RPLLGFKSPALR*TRWALSPAQCK
Trigger: CTTGCACTGGGCAGGGCTCAGGGCCCATCGCGTGCAGCGAAGCGCGGGTGATTTAAACCCAAGCAGCGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 72 bp GGCCGCAGCAACATCAGCTTCTGCTGGGTGCCCGTGTaGAGCTCCTCCGAGTCCTGGGGCAGGTGCATGTGC +
Preference number: 6 (lower is better)
Translates to: GRSNISFCWVPV*SSSESWGRCMC
Trigger: GCACATGCACCTGCCCCAGGACTCGGAGGAGCTGCACACGGGCACCCAGCAGAAGCTGATGTTGCTGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378241.5
ENST00000378255.5
ENST00000396817.6
ENST00000456122.1
CDS TCA 72 bp TTAAATCACCCGCGCTTCGCTGCACGCGATGGGCCCTaGGCCCTGCCCAGTGCAAGGCTCATTCCCGCCCAA +
Preference number: 6 (lower is better)
Translates to: LNHPRFAARDGP*ALPSARLIPAQ
Trigger: TTGGGCGGGAATGAGCCTTGCACTGGGCAGGGCTCAGGGCCCATCGCGTGCAGCGAAGCGCGGGTGATTTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 72 bp TTCTGCTGGGTGCCCGTGTGCAGCTCCTCCGAGTCCTaGGGCAGGTGCATGTGCTTCAGAGCCAAAGCGGGA +
Preference number: 6 (lower is better)
Translates to: FCWVPVCSSSES*GRCMCFRAKAG
Trigger: TCCCGCTTTGGCTCTGAAGCACATGCACCTGCCCCAGGACTCGGAGGAGCTGCACACGGGCACCCAGCAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378241.5
ENST00000378255.5
ENST00000396817.6
ENST00000456122.1
CDS GCA 72 bp AGTCAAGGAGCATCCGGTCGGGTTCTAGGCGCCCGCTaGTTGGGTTTAAATCACCCGCGCTTCGCTGCACGC +
Preference number: 6 (lower is better)
Translates to: SQGASGRVLGAR*LGLNHPRFAAR
Trigger: GCGTGCAGCGAAGCGCGGGTGATTTAAACCCAAGCAGCGGGCGCCTAGAACCCGACCGGATGCTCCTTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 72 bp CTTGGGTTTAAATCACCCGCGCTTCGCTGCACGCGATaGGCCCTGAGCCCTGCCCAGTGCAAGGCTCATTCC +
Preference number: 6 (lower is better)
Translates to: LGFKSPALRCTR*ALSPAQCKAHS
Trigger: GGAATGAGCCTTGCACTGGGCAGGGCTCAGGGCCCATCGCGTGCAGCGAAGCGCGGGTGATTTAAACCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CAA 72 bp CAAGGAGCATCCGGTCGGGTTCTAGGCGCCCGCTGCTaGGGTTTAAATCACCCGCGCTTCGCTGCACGCGAT +
Preference number: 6 (lower is better)
Translates to: QGASGRVLGARC*GLNHPRFAARD
Trigger: ATCGCGTGCAGCGAAGCGCGGGTGATTTAAACCCAAGCAGCGGGCGCCTAGAACCCGACCGGATGCTCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS TCA 72 bp CGAAACTCCCAGAGCAGGTGGCCCCAGCCGACGAGGTaGGTGGGCTGCGGAACTGCGCTTAGAAATCATTCT +
Preference number: 6 (lower is better)
Translates to: RNSQSRWPQPTR*VGCGTALRNHS
Trigger: AGAATGATTTCTAAGCGCAGTTCCGCAGCCCACTCACCTCGTCGGCTGGGGCCACCTGCTCTGGGAGTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 72 bp CGCCCAACAAACACAGGTGTTGCTCTGGTAAGGCGTTaGCCATGTCTGTGGAGGTGCAGTCGCGGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: RPTNTGVALVRR*PCLWRCSRGKG
Trigger: TCCCTTCCCGCGACTGCACCTCCACAGACATGGGCAACGCCTTACCAGAGCAACACCTGTGTTTGTTGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 72 bp GTTGCTCTGGTAAGGCGTTGCCCATGTCTGTGGAGGTaGAGTCGCGGGAAGGGAAATCGAAACTCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: VALVRRCPCLWR*SRGKGNRNSQS
Trigger: GCTCTGGGAGTTTCGATTTCCCTTCCCGCGACTGCACCTCCACAGACATGGGCAACGCCTTACCAGAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS GCA 72 bp CGGCATAAAGGCTTTAAGCCCTTTCGAAGGCCTCACTaGCAACTGCCTCCTCCTGGCAGATTCCGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: RHKGFKPFRRPH*QLPPPGRFREA
Trigger: GGCTTCCCGGAATCTGCCAGGAGGAGGCAGTTGGCAGTGAGGCCTTCGAAAGGGCTTAAAGCCTTTATGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492201.5
CDS CCA 72 bp ACAGGTGTTGCTCTGGTAAGGCGTTGCCCATGTCTGTaGAGGTGCAGTCGCGGGAAGGGAAATCGAAACTCC +
Preference number: 6 (lower is better)
Translates to: TGVALVRRCPCL*RCSRGKGNRNS
Trigger: GGAGTTTCGATTTCCCTTCCCGCGACTGCACCTCCACAGACATGGGCAACGCCTTACCAGAGCAACACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378289.8
CDS CCA 72 bp TATGCACACCATTTCAGTGCCACCAAGAGCACAAGGTaGGGGTGGAAACACGGTGTCCCTGGACCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: YAHHFSATKSTR*GWKHGVPGPPP
Trigger: TGGAGGAGGTCCAGGGACACCGTGTTTCCACCCCCACCTTGTGCTCTTGGTGGCACTGAAATGGTGTGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378254.5
ENST00000378255.5
ENST00000418843.5
CDS GCA 72 bp AAGCGGTCTATGGAGATAGTTGGATACTCGGCCATCTaGCCCTCGAAAGAACTCATAGCGCCGCCGATCCCA +
Preference number: 6 (lower is better)
Translates to: KRSMEIVGYSAI*PSKELIAPPIP
Trigger: TGGGATCGGCGGCGCTATGAGTTCTTTCGAGGGGCAGATGGCCGAGTATCCAACTATCTCCATAGACCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000378289.8
ENST00000396817.6
ENST00000418843.5
CDS GCA 72 bp AAGGCTTTAAGCCCTTTCGAAGGCCTCACTGCCAACTaGCTCCTCCTGGCAGATTCCGGGAAGCCTTTAGGA +
Preference number: 6 (lower is better)
Translates to: KALSPFEGLTAN*LLLADSGKPLG
Trigger: TCCTAAAGGCTTCCCGGAATCTGCCAGGAGGAGGCAGTTGGCAGTGAGGCCTTCGAAAGGGCTTAAAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492201.5
CDS CCA 72 bp GAAGCAGAACTCTCTTATGGCTGTGGTTCTCAATGCTaGCTGCACGTGGGGATCACCAGGGACCTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: EAELSYGCGSQC*LHVGITRDLLG
Trigger: TCCCAAGAGGTCCCTGGTGATCCCCACGTGCAGCCAGCATTGAGAACCACAGCCATAAGAGAGTTCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS GCA 72 bp AGAGAAGCAGAACTCTCTTATGGCTGTGGTTCTCAATaGTGGCTGCACGTGGGGATCACCAGGGACCTCTTG +
Preference number: 6 (lower is better)
Translates to: REAELSYGCGSQ*WLHVGITRDLL
Trigger: CAAGAGGTCCCTGGTGATCCCCACGTGCAGCCAGCATTGAGAACCACAGCCATAAGAGAGTTCTGCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS GCA 72 bp CAGAAGTGGGTTTCGGTCTGTCCTAGTGGGCCATTCTaGCTTCCAGTTTGTCTCTGTTCCCCTCCACTTCTC +
Preference number: 6 (lower is better)
Translates to: QKWVSVCPSGPF*LPVCLCSPPLL
Trigger: GAGAAGTGGAGGGGAACAGAGACAAACTGGAAGGCAGAATGGCCCACTAGGACAGACCGAAACCCACTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378255.5
ENST00000396817.6
ENST00000456122.1
CDS CCA 72 bp GGTGGAAACACGGTGTCCCTGGACCTCCTCCAACAGTaGTCCCTCACCATTGTTACTTGGAAATACGCGCTT +
Preference number: 6 (lower is better)
Translates to: GGNTVSLDLLQQ*SLTIVTWKYAL
Trigger: AAGCGCGTATTTCCAAGTAACAATGGTGAGGGACCACTGTTGGAGGAGGTCCAGGGACACCGTGTTTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378254.5
ENST00000378255.5
ENST00000418843.5
CDS CCA 72 bp AGCACTATTGAGGCCAGAGGAAGTGAGAGACAGAAGTaGGTTTCGGTCTGTCCTAGTGGGCCATTCTGCCTT +
Preference number: 6 (lower is better)
Translates to: STIEARGSERQK*VSVCPSGPFCL
Trigger: AAGGCAGAATGGCCCACTAGGACAGACCGAAACCCACTTCTGTCTCTCACTTCCTCTGGCCTCAATAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378255.5
ENST00000396817.6
ENST00000456122.1
CDS CAA 90 bp GAAACACGGTGTCCCTGGACCTCCTCCAACAGTGGTCCCTCACCATaGTTACTTGGAAATACGCGCTTGTATGTGATCAGGTGTGTCTGC +
Preference number: 6 (lower is better)
Translates to: ETRCPWTSSNSGPSP*LLGNTRLYVIRCVC
Trigger: GCAGACACACCTGATCACATACAAGCGCGTATTTCCAAGTAACAATGGTGAGGGACCACTGTTGGAGGAGGTCCAGGGACACCGTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378254.5
ENST00000378255.5
ENST00000418843.5
CDS CCA 72 bp CAGGTTCTCCCTATCGAAGCGGTCTATGGAGATAGTTaGATACTCGGCCATCTGCCCCTCGAAAGAACTCAT +
Preference number: 6 (lower is better)
Translates to: QVLPIEAVYGDS*ILGHLPLERTH
Trigger: ATGAGTTCTTTCGAGGGGCAGATGGCCGAGTATCCAACTATCTCCATAGACCGCTTCGATAGGGAGAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357717.6
ENST00000378241.5
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000378289.8
ENST00000396817.6
ENST00000418843.5
ENST00000456122.1
CDS CAA 72 bp TGTCCCTGGACCTCCTCCAACAGTGGTCCCTCACCATaGTTACTTGGAAATACGCGCTTGTATGTGATCAGG +
Preference number: 6 (lower is better)
Translates to: CPWTSSNSGPSP*LLGNTRLYVIR
Trigger: CCTGATCACATACAAGCGCGTATTTCCAAGTAACAATGGTGAGGGACCACTGTTGGAGGAGGTCCAGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378254.5
ENST00000378255.5
ENST00000418843.5
CDS CCA 72 bp GGTCCCAACAGCCAGAGTGGAAAACCTCATGATCCATaGGCATTTGTAAAAGAACCAAGAAGAGCCTTGCCT +
Preference number: 6 (lower is better)
Translates to: GPNSQSGKPHDP*AFVKEPRRALP
Trigger: AGGCAAGGCTCTTCTTGGTTCTTTTACAAATGCCCATGGATCATGAGGTTTTCCACTCTGGCTGTTGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489845.1
CDS CAA 72 bp AGTGGTCCCTCACCATTGTTACTTGGAAATACGCGCTaGTATGTGATCAGGTGTGTCTGCACTCCAACCTTC +
Preference number: 6 (lower is better)
Translates to: SGPSPLLLGNTR*YVIRCVCTPTF
Trigger: GAAGGTTGGAGTGCAGACACACCTGATCACATACAAGCGCGTATTTCCAAGTAACAATGGTGAGGGACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378254.5
ENST00000378255.5
ENST00000418843.5
CDS TCA 72 bp TTTCTGGAAGTAATTCCACAGGGTAATTTGCTCCACTaGAAATATTCCTCTGCCTTGGGATGCCGGCATGCA +
Preference number: 6 (lower is better)
Translates to: FLEVIPQGNLLH*KYSSALGCRHA
Trigger: TGCATGCCGGCATCCCAAGGCAGAGGAATATTTTCAGTGGAGCAAATTACCCTGTGGAATTACTTCCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000378289.8
ENST00000396817.6
CDS TCA 72 bp ATGCCTGGGCCTCACTCCCAAAGATCTCCTGAACACTaGGTACTAGTGGGCCTAGAAATCAGTACATTTAAA +
Preference number: 6 (lower is better)
Translates to: MPGPHSQRSPEH*VLVGLEISTFK
Trigger: TTTAAATGTACTGATTTCTAGGCCCACTAGTACTCAGTGTTCAGGAGATCTTTGGGAGTGAGGCCCAGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378242.1
CDS TCA 72 bp TTTCACTGTTGGATTCTTCACAATCTACAAAGTTTGTaGAACGAGAGCTCTGCATACACTCTGCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: FHCWILHNLQSL*NESSAYTLLCS
Trigger: GCTGCAGAGCAGAGTGTATGCAGAGCTCTCGTTTCACAAACTTTGTAGATTGTGAAGAATCCAACAGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
ENST00000492201.5
CDS CCA 72 bp AACTTTATCCATAGTTGTGCCAACTGGAATGACATTTaGATATGCGTTCACAGGACAGAGGTAGCTCAAGAA +
Preference number: 6 (lower is better)
Translates to: NFIHSCANWNDI*ICVHRTEVAQE
Trigger: TTCTTGAGCTACCTCTGTCCTGTGAACGCATATCCAAATGTCATTCCAGTTGGCACAACTATGGATAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000378289.8
ENST00000396817.6
ENST00000489161.1
ENST00000492201.5
CDS GCA 72 bp TCACCAGTTGCCAGCTTCTCATATAAATATTGTAAATaGTCTCGTTTAGGTAACTCAGCTTCTGGAGTTGAG +
Preference number: 6 (lower is better)
Translates to: SPVASFSYKYCK*SRLGNSASGVE
Trigger: CTCAACTCCAGAAGCTGAGTTACCTAAACGAGAGCATTTACAATATTTATATGAGAAGCTGGCAACTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS CCA 72 bp TTCCATGAGAGAGGCAGGAATATTCTCTTTGATTGTTaGTCTGTAGTCAGCTTTGTCCAAGGAAGTAATATC +
Preference number: 6 (lower is better)
Translates to: FHERGRNILFDC*SVVSFVQGSNI
Trigger: GATATTACTTCCTTGGACAAAGCTGACTACAGACCAACAATCAAAGAGAATATTCCTGCCTCTCTCATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6
CDS CAA 90 bp TCTGCTTTTCAAATCAGAGTAAGTATCCTTTGGGCAAATTACATTTaGTTCCATGAGAGAGGCAGGAATATTCTCTTTGATTGTTGGTCT +
Preference number: 6 (lower is better)
Translates to: SAFQIRVSILWANYI*FHERGRNILFDCWS
Trigger: AGACCAACAATCAAAGAGAATATTCCTGCCTCTCTCATGGAACAAAATGTAATTTGCCCAAAGGATACTTACTCTGATTTGAAAAGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357717.6
ENST00000378242.1
ENST00000378246.6
ENST00000378249.5
ENST00000378254.5
ENST00000378255.5
ENST00000378258.5
ENST00000378278.7
ENST00000396817.6