Pregenerated sensors for DCLRE1A (Homo sapiens)
Ensembl gene IDs: ENSG00000198924Ensembl transcript IDs: ENST00000361384.7, ENST00000369305.1, ENST00000476112.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACGACTAGTGGATACTCAACCACTTCAGTTTCCCGCGACAGTCCATaGTCTTCCTCCAGCAGCAATGAACAATCCTTTCAGCACTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: TTSGYSTTSVSRDSP*SSSSSNEQSFQHSQ Trigger: CTGGGAGTGCTGAAAGGATTGTTCATTGCTGCTGGAGGAAGATCATGGACTGTCGCGGGAAACTGAAGTGGTTGAGTATCCACTAGTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476112.1 |
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| CDS CCA 90 bp | AGTTGCCTGATGAACAGAAGCAGCAAGCTTCCCTGCCAATGCAGGTaGAAACAACACAAAATCACCACCAGTACATGCCAGATCATAAGG | + |
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Preference number: 5 (lower is better) Translates to: SCLMNRSSKLPCQCR*KQHKITTSTCQIIR Trigger: CCTTATGATCTGGCATGTACTGGTGGTGATTTTGTGTTGTTTCCACCTGCATTGGCAGGGAAGCTTGCTGCTTCTGTTCATCAGGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS GCA 90 bp | CACTCTGTTTCAGAGCGTGGTGGAGAATCCAAACATTCAAAAACATaGCATCGAGGTGTCTGCCCTATCAATGAGGAAAAAGGCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: HSVSERGGESKHSKT*HRGVCPINEEKGIW Trigger: CCAGATGCCTTTTTCCTCATTGATAGGGCAGACACCTCGATGGCATGTTTTTGAATGTTTGGATTCTCCACCACGCTCTGAAACAGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 90 bp | ACAATCCTTCATCATACTTATCCCGAGTTAAGAAGCTGTTCACTTTaGGGCAGCTCTCATCCTGGTCCTTCAGTAAGGGACCATGTCGTT | + |
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Preference number: 5 (lower is better) Translates to: TILHHTYPELRSCSL*GSSHPGPSVRDHVV Trigger: AACGACATGGTCCCTTACTGAAGGACCAGGATGAGAGCTGCCCCAAAGTGAACAGCTTCTTAACTCGGGATAAGTATGATGAAGGATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 90 bp | TCTGGGCTACAATATGTGGTATCTAAGTACAGCATATGGACTTTCTaGTCCGCAAGAAGAGAACGTTCCATGCTGGGATCTGCTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: SGLQYVVSKYSIWTF*SARRERSMLGSALK Trigger: CTTCAGAGCAGATCCCAGCATGGAACGTTCTCTTCTTGCGGACCAGAAAGTCCATATGCTGTACTTAGATACCACATATTGTAGCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 90 bp | AGTAGTTTCCTTGTCTTGGGTCTGCTGAATACCATCTCCACAACTTaGATTCTGACTAGAAGCAACAGAAGTCTGACAACCTGCATTTCC | + |
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Preference number: 5 (lower is better) Translates to: SSFLVLGLLNTISTT*ILTRSNRSLTTCIS Trigger: GGAAATGCAGGTTGTCAGACTTCTGTTGCTTCTAGTCAGAATTCAAGTTGTGGAGATGGTATTCAGCAGACCCAAGACAAGGAAACTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 90 bp | GTCATCAATAAGGGATCATTTGAAACCGAGTTATCAGTTTGGTTCTaGTACGAAGACCATCTTTCCTCAAGGCTACAAAGGACGCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: VINKGSFETELSVWF*YEDHLSSRLQRTPD Trigger: GTCAGGCGTCCTTTGTAGCCTTGAGGAAAGATGGTCTTCGTATCAGAACCAAACTGATAACTCGGTTTCAAATGATCCCTTATTGATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS GCA 90 bp | TCTGGGGCTTCAGCCACTGGACAAAGCGCTTCATTTCTAGGTAGCTaGTGTGTTCACTGTAAGGAATTCCATATATTGAAATGTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: SGASATGQSASFLGS*CVHCKEFHILKCFL Trigger: AAGGAAACATTTCAATATATGGAATTCCTTACAGTGAACACAGCAGCTACCTAGAAATGAAGCGCTTTGTCCAGTGGCTGAAGCCCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 90 bp | TTTGAGCTAGCAGGAAGTGAGTGTATCTCTTGTAATGAAAAGGAATaGTTGAGGTACACAGAAGACCATCAGGACACTCTGTTTCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: FELAGSECISCNEKE*LRYTEDHQDTLFQS Trigger: GCTCTGAAACAGAGTGTCCTGATGGTCTTCTGTGTACCTCAACCATTCCTTTTCATTACAAGAGATACACTCACTTCCTGCTAGCTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS GCA 90 bp | CCCTGCCAATGCAGGTGGAAACAACACAAAATCACCACCAGTACATaGCAGATCATAAGGCAAAGTACTCTCATTATTTTGAGAAATAGG | + |
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Preference number: 5 (lower is better) Translates to: PCQCRWKQHKITTST*QIIRQSTLIILRNR Trigger: CCTATTTCTCAAAATAATGAGAGTACTTTGCCTTATGATCTGGCATGTACTGGTGGTGATTTTGTGTTGTTTCCACCTGCATTGGCAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 90 bp | CACAGTCCCTGGACAAAGGGCTTAACAGGTATCCCAAACACTAAATaGCTATCTAACAAAACTAGTCACAACATAATCAAAGAGATGTGT | + |
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Preference number: 5 (lower is better) Translates to: HSPWTKGLTGIPNTK*LSNKTSHNIIKEMC Trigger: ACACATCTCTTTGATTATGTTGTGACTAGTTTTGTTAGATAGTCATTTAGTGTTTGGGATACCTGTTAAGCCCTTTGTCCAGGGACTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361384.7 ENST00000369305.1 ENST00000476112.1 |
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| CDS TCA 90 bp | CTTAAAGATTTTTCTGCTTTCCTCTTGCACTGCGAGGACCTCTTTTaGTTAGGACTTGGAACTGGATTTAAGTTTATCCCTTCTAATGCA | + |
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Preference number: 5 (lower is better) Translates to: LKDFSAFLLHCEDLF*LGLGTGFKFIPSNA Trigger: TGCATTAGAAGGGATAAACTTAAATCCAGTTCCAAGTCCTAATCAAAAGAGGTCCTCGCAGTGCAAGAGGAAAGCAGAAAAATCTTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS GCA 90 bp | TATTCTAGTGAACTTGTTAGAGTGTGTCCATCCTGTAGGTCGAAATaGCAAAATCTGATTGTATTTCCCACCACACTTCTTCAAATGACT | + |
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Preference number: 5 (lower is better) Translates to: YSSELVRVCPSCRSK*QNLIVFPTTLLQMT Trigger: AGTCATTTGAAGAAGTGTGGTGGGAAATACAATCAGATTTTGGCATTTCGACCTACAGGATGGACACACTCTAACAAGTTCACTAGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 90 bp | GCAGTGTTGGTAATGAACATATTGGCAAGCTACAAACCTTGTACCTaGCAACACCTGCTATTCCATTTATACCACAATGAAACTAAGATA | + |
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Preference number: 5 (lower is better) Translates to: AVLVMNILASYKPCT*QHLLFHLYHNETKI Trigger: TATCTTAGTTTCATTGTGGTATAAATGGAATAGCAGGTGTTGTCAGGTACAAGGTTTGTAGCTTGCCAATATGTTCATTACCAACACTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361384.7 ENST00000369305.1 ENST00000476112.1 |
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| CDS CCA 90 bp | AACAACTTTGACACCATTCACAATACATTCAGTGTCCAGTGGCAATaGGTGAATATATTGTTCTTGCACATGAAGCTTGTTCTTCAACAA | + |
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Preference number: 5 (lower is better) Translates to: NNFDTIHNTFSVQWQ*VNILFLHMKLVLQQ Trigger: TTGTTGAAGAACAAGCTTCATGTGCAAGAACAATATATTCACCCATTGCCACTGGACACTGAATGTATTGTGAATGGTGTCAAAGTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 90 bp | AAGCAAAACAACTTTGACACCATTCACAATACATTCAGTGTCCAGTaGCAATGGGTGAATATATTGTTCTTGCACATGAAGCTTGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: KQNNFDTIHNTFSVQ*QWVNILFLHMKLVL Trigger: AAGAACAAGCTTCATGTGCAAGAACAATATATTCACCCATTGCCACTGGACACTGAATGTATTGTGAATGGTGTCAAAGTTGTTTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS GCA 90 bp | CACACCTATATCCATTTGCTTCATTACCTTGGTAGAAGGATGTCTTaGATTATACTTAAGACCAGAAGGCAATATTTTCAAATACTTCGG | + |
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Preference number: 5 (lower is better) Translates to: HTYIHLLHYLGRRMS*IILKTRRQYFQILR Trigger: CCGAAGTATTTGAAAATATTGCCTTCTGGTCTTAAGTATAATGCAAGACATCCTTCTACCAAGGTAATGAAGCAAATGGATATAGGTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 90 bp | CTAATTGTATTTTGGGTTGGTTGGGAAGAAAGATACCCTTCTACCTaGCTTTCAAAAGGTTTCAACATTAAACTCTTAACTAACGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LIVFWVGWEERYPST*LSKGFNIKLLTNGR Trigger: TCTTCCGTTAGTTAAGAGTTTAATGTTGAAACCTTTTGAAAGTCAGGTAGAAGGGTATCTTTCTTCCCAACCAACCCAAAATACAATTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 72 bp | CCCATGGTTCCGAAGGTGGCCAGCCCTCTGTCCACCTaGCTCAAAACGGGGTCACACGCCAGCCTCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: PMVPKVASPLST*LKTGSHASLSL Trigger: AAGGGAGAGGCTGGCGTGTGACCCCGTTTTGAGTCAGGTGGACAGAGGGCTGGCCACCTTCGGAACCATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361384.7 |
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| CDS CCA 72 bp | AGGTCTGACTCCGTATTGCACCCATGGTTCCGAAGGTaGCCAGCCCTCTGTCCACCTGACTCAAAACGGGGT | + |
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Preference number: 6 (lower is better) Translates to: RSDSVLHPWFRR*PALCPPDSKRG Trigger: ACCCCGTTTTGAGTCAGGTGGACAGAGGGCTGGCCACCTTCGGAACCATGGGTGCAATACGGAGTCAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361384.7 |
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| CDS CCA 72 bp | ACGCCAGCCTCTCCCTTATCTTTTGGCATTAGAGGCTaGGAGGCCAGGAAGCGGGGCCTTAATCATCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TPASPLSFGIRG*EARKRGLNHLQ Trigger: CTGGAGATGATTAAGGCCCCGCTTCCTGGCCTCCCAGCCTCTAATGCCAAAAGATAAGGGAGAGGCTGGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000361384.7 |
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| CDS TCA 72 bp | TTCAAATATGTGAAAGAGTGGGCTTGTATTGAGGTCTaGCTCCGTATTGCACCCATGGTTCCGAAGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: FKYVKEWACIEV*LRIAPMVPKVA Trigger: GGCCACCTTCGGAACCATGGGTGCAATACGGAGTCAGACCTCAATACAAGCCCACTCTTTCACATATTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000361384.7 |
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| CDS GCA 72 bp | TGCCTGATGAACAGAAGCAGCAAGCTTCCCTGCCAATaGAGGTGGAAACAACACAAAATCACCACCAGTACA | + |
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Preference number: 6 (lower is better) Translates to: CLMNRSSKLPCQ*RWKQHKITTST Trigger: TGTACTGGTGGTGATTTTGTGTTGTTTCCACCTGCATTGGCAGGGAAGCTTGCTGCTTCTGTTCATCAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 72 bp | CATCATACTTATCCCGAGTTAAGAAGCTGTTCACTTTaGGGCAGCTCTCATCCTGGTCCTTCAGTAAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: HHTYPELRSCSL*GSSHPGPSVRD Trigger: GTCCCTTACTGAAGGACCAGGATGAGAGCTGCCCCAAAGTGAACAGCTTCTTAACTCGGGATAAGTATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CAA 90 bp | TACAATCCTTCATCATACTTATCCCGAGTTAAGAAGCTGTTCACTTaGGGGCAGCTCTCATCCTGGTCCTTCAGTAAGGGACCATGTCGT | + |
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Preference number: 6 (lower is better) Translates to: YNPSSYLSRVKKLFT*GQLSSWSFSKGPCR Trigger: ACGACATGGTCCCTTACTGAAGGACCAGGATGAGAGCTGCCCCAAAGTGAACAGCTTCTTAACTCGGGATAAGTATGATGAAGGATTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 72 bp | CAGAAGACCATCAGGACACTCTGTTTCAGAGCGTGGTaGAGAATCCAAACATTCAAAAACATGCCATCGAGG | + |
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Preference number: 6 (lower is better) Translates to: QKTIRTLCFRAW*RIQTFKNMPSR Trigger: CCTCGATGGCATGTTTTTGAATGTTTGGATTCTCCACCACGCTCTGAAACAGAGTGTCCTGATGGTCTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 72 bp | TTCCAGGTGCCCACATTTACAGTAGGTATGATTTTCTaGGGCTTCAGCCACTGGACAAAGCGCTTCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: FQVPTFTVGMIF*GFSHWTKRFIS Trigger: AGAAATGAAGCGCTTTGTCCAGTGGCTGAAGCCCCAGAAAATCATACCTACTGTAAATGTGGGCACCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CAA 72 bp | TCATCATACTTATCCCGAGTTAAGAAGCTGTTCACTTaGGGGCAGCTCTCATCCTGGTCCTTCAGTAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SSYLSRVKKLFT*GQLSSWSFSKG Trigger: TCCCTTACTGAAGGACCAGGATGAGAGCTGCCCCAAAGTGAACAGCTTCTTAACTCGGGATAAGTATGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CAA 72 bp | ATCCTTTCAGCACTCCCAGATGACAAAACGCTGTGTTaGTGTATAAGTGAAAGCCACTCGCGCCAGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: ILSALPDDKTLC*CISESHSRQSL Trigger: AAGTGACTGGCGCGAGTGGCTTTCACTTATACACAAACACAGCGTTTTGTCATCTGGGAGTGCTGAAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476112.1 |
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| CDS CAA 90 bp | ATCGAGGTGTCTGCCCTATCAATGAGGAAAAAGGCATCTGGCAATTaGGACAGTATCCATCATAAACTGGACGTATCTTTGGGGACACGT | + |
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Preference number: 6 (lower is better) Translates to: IEVSALSMRKKASGN*DSIHHKLDVSLGTR Trigger: ACGTGTCCCCAAAGATACGTCCAGTTTATGATGGATACTGTCCAAATTGCCAGATGCCTTTTTCCTCATTGATAGGGCAGACACCTCGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CAA 90 bp | GAGCTAGCAGGAAGTGAGTGTATCTCTTGTAATGAAAAGGAATGGTaGAGGTACACAGAAGACCATCAGGACACTCTGTTTCAGAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: ELAGSECISCNEKEW*RYTEDHQDTLFQSV Trigger: CACGCTCTGAAACAGAGTGTCCTGATGGTCTTCTGTGTACCTCAACCATTCCTTTTCATTACAAGAGATACACTCACTTCCTGCTAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CAA 90 bp | AGTTACAGCCTCAAAGGCAGTGTTGATGGCAAACCGGATAACCTCTaGCTGAGATGGAAAGGTGTATTCTGGGCTACAATATGTGGTATC | + |
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Preference number: 6 (lower is better) Translates to: SYSLKGSVDGKPDNL*LRWKGVFWATICGI Trigger: GATACCACATATTGTAGCCCAGAATACACCTTTCCATCTCAGCAAGAGGTTATCCGGTTTGCCATCAACACTGCCTTTGAGGCTGTAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CAA 72 bp | CTCAAAGGCAGTGTTGATGGCAAACCGGATAACCTCTaGCTGAGATGGAAAGGTGTATTCTGGGCTACAATA | + |
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Preference number: 6 (lower is better) Translates to: LKGSVDGKPDNL*LRWKGVFWATI Trigger: TATTGTAGCCCAGAATACACCTTTCCATCTCAGCAAGAGGTTATCCGGTTTGCCATCAACACTGCCTTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 72 bp | CTTGTCTTGGGTCTGCTGAATACCATCTCCACAACTTaGATTCTGACTAGAAGCAACAGAAGTCTGACAACC | + |
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Preference number: 6 (lower is better) Translates to: LVLGLLNTISTT*ILTRSNRSLTT Trigger: GGTTGTCAGACTTCTGTTGCTTCTAGTCAGAATTCAAGTTGTGGAGATGGTATTCAGCAGACCCAAGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 72 bp | CACCTGGACAGTGATTGGCATCAAGCAAAACAACTTTaGCACCATTCACAATACATTCAGTGTCCAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: HLDSDWHQAKQL*HHSQYIQCPVA Trigger: TGCCACTGGACACTGAATGTATTGTGAATGGTGTCAAAGTTGTTTTGCTTGATGCCAATCACTGTCCAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 72 bp | GCAGGAAGTGAGTGTATCTCTTGTAATGAAAAGGAATaGTTGAGGTACACAGAAGACCATCAGGACACTCTG | + |
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Preference number: 6 (lower is better) Translates to: AGSECISCNEKE*LRYTEDHQDTL Trigger: CAGAGTGTCCTGATGGTCTTCTGTGTACCTCAACCATTCCTTTTCATTACAAGAGATACACTCACTTCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 72 bp | CAATATGTGGTATCTAAGTACAGCATATGGACTTTCTaGTCCGCAAGAAGAGAACGTTCCATGCTGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: QYVVSKYSIWTF*SARRERSMLGS Trigger: AGATCCCAGCATGGAACGTTCTCTTCTTGCGGACCAGAAAGTCCATATGCTGTACTTAGATACCACATATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 72 bp | TCTGGGCTACAATATGTGGTATCTAAGTACAGCATATaGACTTTCTGGTCCGCAAGAAGAGAACGTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: SGLQYVVSKYSI*TFWSARRERSM Trigger: CATGGAACGTTCTCTTCTTGCGGACCAGAAAGTCCATATGCTGTACTTAGATACCACATATTGTAGCCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 72 bp | AGTGTTGATGGCAAACCGGATAACCTCTTGCTGAGATaGAAAGGTGTATTCTGGGCTACAATATGTGGTATC | + |
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Preference number: 6 (lower is better) Translates to: SVDGKPDNLLLR*KGVFWATICGI Trigger: GATACCACATATTGTAGCCCAGAATACACCTTTCCATCTCAGCAAGAGGTTATCCGGTTTGCCATCAACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 72 bp | GAAGTGAGTGTATCTCTTGTAATGAAAAGGAATGGTTaGGGTACACAGAAGACCATCAGGACACTCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: EVSVSLVMKRNG*GTQKTIRTLCF Trigger: GAAACAGAGTGTCCTGATGGTCTTCTGTGTACCTCAACCATTCCTTTTCATTACAAGAGATACACTCACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 72 bp | TTTTCTGCTTTCCTCTTGCACTGCGAGGACCTCTTTTaGTTAGGACTTGGAACTGGATTTAAGTTTATCCCT | + |
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Preference number: 6 (lower is better) Translates to: FSAFLLHCEDLF*LGLGTGFKFIP Trigger: AGGGATAAACTTAAATCCAGTTCCAAGTCCTAATCAAAAGAGGTCCTCGCAGTGCAAGAGGAAAGCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS GCA 72 bp | AAAGGTAACAAAACCCCCACCAACTCAATGGGAATCTaGAGTGTTGGTAATGAACATATTGGCAAGCTACAA | + |
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Preference number: 6 (lower is better) Translates to: KGNKTPTNSMGI*SVGNEHIGKLQ Trigger: TTGTAGCTTGCCAATATGTTCATTACCAACACTGCAGATTCCCATTGAGTTGGTGGGGGTTTTGTTACCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000361384.7 ENST00000369305.1 ENST00000476112.1 |
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| CDS GCA 72 bp | GAACTTGTTAGAGTGTGTCCATCCTGTAGGTCGAAATaGCAAAATCTGATTGTATTTCCCACCACACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ELVRVCPSCRSK*QNLIVFPTTLL Trigger: AAGAAGTGTGGTGGGAAATACAATCAGATTTTGGCATTTCGACCTACAGGATGGACACACTCTAACAAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS GCA 72 bp | TCAGCCACTGGACAAAGCGCTTCATTTCTAGGTAGCTaGTGTGTTCACTGTAAGGAATTCCATATATTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SATGQSASFLGS*CVHCKEFHILK Trigger: TTTCAATATATGGAATTCCTTACAGTGAACACAGCAGCTACCTAGAAATGAAGCGCTTTGTCCAGTGGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 72 bp | ACCGTCCAAATAATTCATAAATCCAACCACAGTCCCTaGACAAAGGGCTTAACAGGTATCCCAAACACTAAA | + |
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Preference number: 6 (lower is better) Translates to: TVQIIHKSNHSP*TKGLTGIPNTK Trigger: TTTAGTGTTTGGGATACCTGTTAAGCCCTTTGTCCAGGGACTGTGGTTGGATTTATGAATTATTTGGACGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361384.7 ENST00000369305.1 ENST00000476112.1 |
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| CDS CAA 72 bp | GGAAGTGAGTGTATCTCTTGTAATGAAAAGGAATGGTaGAGGTACACAGAAGACCATCAGGACACTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GSECISCNEKEW*RYTEDHQDTLF Trigger: AAACAGAGTGTCCTGATGGTCTTCTGTGTACCTCAACCATTCCTTTTCATTACAAGAGATACACTCACTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 72 bp | CGCTGTGACCTCTCACTAGAAAGTTCCACAGAAAGCTaGCTCTCATGTAAAGTACTTGCATCAAATTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: RCDLSLESSTES*LSCKVLASNSK Trigger: TTTAGAATTTGATGCAAGTACTTTACATGAGAGTCAGCTTTCTGTGGAACTTTCTAGTGAGAGGTCACAGCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS GCA 72 bp | TGCAGGTGGAAACAACACAAAATCACCACCAGTACATaGCAGATCATAAGGCAAAGTACTCTCATTATTTTG | + |
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Preference number: 6 (lower is better) Translates to: CRWKQHKITTST*QIIRQSTLIIL Trigger: CAAAATAATGAGAGTACTTTGCCTTATGATCTGGCATGTACTGGTGGTGATTTTGTGTTGTTTCCACCTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 72 bp | GACACCATTCACAATACATTCAGTGTCCAGTGGCAATaGGTGAATATATTGTTCTTGCACATGAAGCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: DTIHNTFSVQWQ*VNILFLHMKLV Trigger: AACAAGCTTCATGTGCAAGAACAATATATTCACCCATTGCCACTGGACACTGAATGTATTGTGAATGGTGTC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CAA 90 bp | ATGTGTTCTGAGTTGTTTGCAAGACGCAAAGCAACTCCCACTAGTTaGTCATTCTCAACAAAATCTGTAAATTGTAGAGCTTGTTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: MCSELFARRKATPTS*SFSTKSVNCRACWD Trigger: ATCCCAACAAGCTCTACAATTTACAGATTTTGTTGAGAATGACAAACTAGTGGGAGTTGCTTTGCGTCTTGCAAACAACTCAGAACACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CCA 72 bp | AACTTTGACACCATTCACAATACATTCAGTGTCCAGTaGCAATGGGTGAATATATTGTTCTTGCACATGAAG | + |
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Preference number: 6 (lower is better) Translates to: NFDTIHNTFSVQ*QWVNILFLHMK Trigger: CTTCATGTGCAAGAACAATATATTCACCCATTGCCACTGGACACTGAATGTATTGTGAATGGTGTCAAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS CAA 72 bp | AGTGTTGGTAATGAACATATTGGCAAGCTACAAACCTaGTACCTGACAACACCTGCTATTCCATTTATACCA | + |
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Preference number: 6 (lower is better) Translates to: SVGNEHIGKLQT*YLTTPAIPFIP Trigger: TGGTATAAATGGAATAGCAGGTGTTGTCAGGTACAAGGTTTGTAGCTTGCCAATATGTTCATTACCAACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361384.7 ENST00000369305.1 ENST00000476112.1 |
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| CDS CAA 72 bp | GAGTTGTTTGCAAGACGCAAAGCAACTCCCACTAGTTaGTCATTCTCAACAAAATCTGTAAATTGTAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: ELFARRKATPTS*SFSTKSVNCRA Trigger: AGCTCTACAATTTACAGATTTTGTTGAGAATGACAAACTAGTGGGAGTTGCTTTGCGTCTTGCAAACAACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 72 bp | CAGCTTAATCTTAGAACGAGATTTGTAACATTGTTATaGAGCTACTGTCAGTTCTTTCAAGTGGACAACCGT | + |
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Preference number: 6 (lower is better) Translates to: QLNLRTRFVTLL*SYCQFFQVDNR Trigger: ACGGTTGTCCACTTGAAAGAACTGACAGTAGCTTCATAACAATGTTACAAATCTCGTTCTAAGATTAAGCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361384.7 ENST00000369305.1 ENST00000476112.1 |
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| CDS TCA 72 bp | GTAATGAACATATTGGCAAGCTACAAACCTTGTACCTaGCAACACCTGCTATTCCATTTATACCACAATGAA | + |
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Preference number: 6 (lower is better) Translates to: VMNILASYKPCT*QHLLFHLYHNE Trigger: TTCATTGTGGTATAAATGGAATAGCAGGTGTTGTCAGGTACAAGGTTTGTAGCTTGCCAATATGTTCATTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361384.7 ENST00000369305.1 ENST00000476112.1 |
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| CDS TCA 72 bp | TTTTGGGTTGGTTGGGAAGAAAGATACCCTTCTACCTaGCTTTCAAAAGGTTTCAACATTAAACTCTTAACT | + |
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Preference number: 6 (lower is better) Translates to: FWVGWEERYPST*LSKGFNIKLLT Trigger: AGTTAAGAGTTTAATGTTGAAACCTTTTGAAAGTCAGGTAGAAGGGTATCTTTCTTCCCAACCAACCCAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000361384.7 ENST00000369305.1 |
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| CDS TCA 72 bp | TGGACAAAGGGCTTAACAGGTATCCCAAACACTAAATaGCTATCTAACAAAACTAGTCACAACATAATCAAA | + |
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Preference number: 6 (lower is better) Translates to: WTKGLTGIPNTK*LSNKTSHNIIK Trigger: TTTGATTATGTTGTGACTAGTTTTGTTAGATAGTCATTTAGTGTTTGGGATACCTGTTAAGCCCTTTGTCCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361384.7 ENST00000369305.1 ENST00000476112.1 |
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