RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCLK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133083

Ensembl transcript IDs: ENST00000255448.8, ENST00000360631.8, ENST00000379892.4, ENST00000379893.5, ENST00000460982.1, ENST00000477664.1, ENST00000486239.1, ENST00000615680.4

Found 957 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGAATGGGCCCTGCATTCTTCTGAGCTGCCCTTCTGCAGTGTGCTaGGAAACACCCCCTAGCTTCACACGGTCCAGAGTCCCCCTAGAC +
Preference number: 1 (lower is better)
Translates to: LNGPCILLSCPSAVC*ETPPSFTRSRVPLD
Trigger: GTCTAGGGGGACTCTGGACCGTGTGAAGCTAGGGGGTGTTTCTCAGCACACTGCAGAAGGGCAGCTCAGAAGAATGCAGGGCCCATTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 90 bp CTTCACACGGTCCAGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTaGGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATA +
Preference number: 1 (lower is better)
Translates to: LHTVQSPPRRRWEKA*AMHRRLSTLDAVAI
Trigger: TATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCTGGACCGTGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 90 bp AGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCAGCAGCTaGTATGGAAGCAGCATTTCTGGGGCGTCATCAGTACATCTTCAT +
Preference number: 1 (lower is better)
Translates to: SCGDSLRVCAGASSS*YGSSISGASSVHLH
Trigger: ATGAAGATGTACTGATGACGCCCCAGAAATGCTGCTTCCATATCAGCTGCTGCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CCA 90 bp TTATTAAAAGGGCGAGTTAGGGGAGCGAACAGTCTCGGAGGAGCTTaGGGAGTAGTCTTCCGATTCCGAGTTGAGTTCGGGAGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: LLKGRVRGANSLGGA*GVVFRFRVEFGRSW
Trigger: CCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTGTTCGCTCCCCTAACTCGCCCTTTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR TCA 90 bp GTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTaGGTTGGGCACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCT +
Preference number: 1 (lower is better)
Translates to: VVSWIPEPSKPWEYI*VGHLPLRHPRRILS
Trigger: AGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 90 bp TTGTGTTCCCAGTGTGCTTTCTCCTCAGCCATCTTGCAAAGCAACTaGCTCCAGTCCCCTTGTGCCCCAGCTCTCCTATGTGTGGATTTC +
Preference number: 1 (lower is better)
Translates to: LCSQCAFSSAILQSN*LQSPCAPALLCVDF
Trigger: GAAATCCACACATAGGAGAGCTGGGGCACAAGGGGACTGGAGGCAGTTGCTTTGCAAGATGGCTGAGGAGAAAGCACACTGGGAACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CCA 90 bp AGCATTTCTGGGGCGTCATCAGTACATCTTCATGTGGAGACAATTTaGGGGGCACCATCTATTTCCTGGGTCAAGCTCTTTGCCACAAAC +
Preference number: 1 (lower is better)
Translates to: SISGASSVHLHVETI*GAPSISWVKLFATN
Trigger: GTTTGTGGCAAAGAGCTTGACCCAGGAAATAGATGGTGCCCCCCAAATTGTCTCCACATGAAGATGTACTGATGACGCCCCAGAAATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 90 bp TTCCACTGTTTATTCAGCATAGATCACTCAAATTCTACAGTGATGTaGTGGGATCCCCATGCTGAATGGGCCCTGCATTCTTCTGAGCTG +
Preference number: 1 (lower is better)
Translates to: FHCLFSIDHSNSTVM*WDPHAEWALHSSEL
Trigger: CAGCTCAGAAGAATGCAGGGCCCATTCAGCATGGGGATCCCAGCACATCACTGTAGAATTTGAGTGATCTATGCTGAATAAACAGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATaGTGTAGCAATATAGTTAATGCCCACAGAAAAAGCAGTAATTCA +
Preference number: 1 (lower is better)
Translates to: MGKGLSHAPQAQYTR*CSNIVNAHRKSSNS
Trigger: TGAATTACTGCTTTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 90 bp AAAAGCAAAGCAATCTGGATACACCAATGTAGTCAGCATGCCTTGTaGTTGTCTGTTAACCCTCTGAGTACATCTCTGACATTCAGGATC +
Preference number: 1 (lower is better)
Translates to: KSKAIWIHQCSQHAL*LSVNPLSTSLTFRI
Trigger: GATCCTGAATGTCAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTGGTGTATCCAGATTGCTTTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 90 bp AAAGCAGGTGAGAAAAATCACAGGATCTTATTCCCTCTTTCTGTTTaGAATTCCAGCCCTGCAGAGCACCGGGCAATTTATTGCTCTTTT +
Preference number: 1 (lower is better)
Translates to: KAGEKNHRILFPLSV*NSSPAEHRAIYCSF
Trigger: AAAAGAGCAATAAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGATCCTGTGATTTTTCTCACCTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 90 bp CCTCCTCCTCTAGTGTGTAATTACATACAAACTAAAGATTCCTTCTaGCGTCCTAGGAACCCCATTTGTTACCGTTTCATGTGTAAGCAC +
Preference number: 1 (lower is better)
Translates to: PPPLVCNYIQTKDSF*RPRNPICYRFMCKH
Trigger: GTGCTTACACATGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTATGTAATTACACACTAGAGGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR TCA 90 bp GCCACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATaGAATTCATCTAGAGCCAGGCCCTGTACAAAAATCTCAGCATTT +
Preference number: 1 (lower is better)
Translates to: ATWLVCSCTQYWVRV*NSSRARPCTKISAF
Trigger: AAATGCTGAGATTTTTGTACAGGGCCTGGCTCTAGATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379892.4
3UTR GCA 90 bp TCTAAAATGGAATCTGTTCCAGAAGAAACTCAGGCCTGGAGACACTaGACTAGGGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTC +
Preference number: 1 (lower is better)
Translates to: SKMESVPEETQAWRH*TREIDLVTRVKIQV
Trigger: GACCTGTATTTTCACTCTTGTTACCAAATCTATCTCCCTAGTGCAGTGTCTCCAGGCCTGAGTTTCTTCTGGAACAGATTCCATTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 90 bp AAGTATATTCAAAACAGAGAACATAGGTACTGTTCAGCCACCAGATaGAAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCC +
Preference number: 1 (lower is better)
Translates to: KYIQNREHRYCSATR*KFHEISLSGCLVDP
Trigger: GGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTTGCATCTGGTGGCTGAACAGTACCTATGTTCTCTGTTTTGAATATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 90 bp CTACAAAGATACCTGAAAACACTTTCAGTTCTGCCATTCAAGCATTaGGCGCTAGATAGATCAGATGAAACTGTTTTACACAAATTTGGG +
Preference number: 1 (lower is better)
Translates to: LQRYLKTLSVLPFKH*ALDRSDETVLHKFG
Trigger: CCCAAATTTGTGTAAAACAGTTTCATCTGATCTATCTAGCGCTCAATGCTTGAATGGCAGAACTGAAAGTGTTTTCAGGTATCTTTGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 90 bp ATAATTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTaGCACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGT +
Preference number: 1 (lower is better)
Translates to: IIKKKTPSAEILALY*HMVSVFLYSILGPC
Trigger: ACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
3UTR GCA 90 bp AAAGGCCTGAAAAATTCCCAAACAAGAATTCTCAATAAAATTCTATaGACTCAGAGGGTTAACAAGTGCTATATTACATACTGCAGATCC +
Preference number: 1 (lower is better)
Translates to: KGLKNSQTRILNKIL*TQRVNKCYITYCRS
Trigger: GGATCTGCAGTATGTAATATAGCACTTGTTAACCCTCTGAGTGCATAGAATTTTATTGAGAATTCTTGTTTGGGAATTTTTCAGGCCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCATCTCTGGTTGTCTCGTaGATCCCAGAGCCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSSLVVS*IPEPSK
Trigger: TTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGA...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCACACCAACACTCTTTCTaGTGTTCTGTGCCCCCTACC +
Preference number: 2 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSHQHSF*CSVPPT
Trigger: GGTAGGGGGCACAGAACACCAGAAAGAGTGTTGGTG...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCTTCCGATTCCGAGTTaGGTTCGGGAGGAGCTGGCT +
Preference number: 2 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSLPIPS*VREELA
Trigger: AGCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR-3UTR GCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCACCTCCAGTCCCCTTGTaGCCCAGCTCTCCTATGTGT +
Preference number: 2 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAPPVPL*PSSPMC
Trigger: ACACATAGGAGAGCTGGGGCACAAGGGGACTGGAGG...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 90 bp GGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTaGAGTTGGGCACCTGCCTCTAAGACACCCCAGGAGAATCCTCTC +
Preference number: 2 (lower is better)
Translates to: GCLVDPRAQQTLGIH*SWAPASKTPQENPL
Trigger: GAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCACCAACACTCTTTCTaGTGTTCTGTGCCCCCTACC +
Preference number: 2 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSHQHSF*CSVPPT
Trigger: GGTAGGGGGCACAGAACACCAGAAAGAGTGTTGGTG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 90 bp ATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTaGGGAATACATTTGAGTTGGGCACCTGCCTCTAAGACACCCCAG +
Preference number: 2 (lower is better)
Translates to: ISLSGCLVDPRAQQT*GIHLSWAPASKTPQ
Trigger: CTGGGGTGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCACTGGGTCAAGCTCTTTaGCACAAACCCAATTCCCTC +
Preference number: 2 (lower is better)
Translates to: HLPLRHPRRILSEHCGDALGQAL*HKPNSL
Trigger: GAGGGAATTGGGTTTGTGGCAAAGAGCTTGACCCAG...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCACACCGGGCAATTTATTaGTCTTTTCCACCAGTTGTT +
Preference number: 2 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSHRAIY*SFPPVV
Trigger: AACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTG...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTGAGTTCGGGAGGAGCTaGCTGCGCCTTGTACCGGCT +
Preference number: 2 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFEFGRS*LRLVPA
Trigger: AGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTC...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGGGCGCTAGCAGCAGCTaGTATGGAAGCAGCATTTCT +
Preference number: 2 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKGASSS*YGSSIS
Trigger: AGAAATGCTGCTTCCATATCAGCTGCTGCTAGCGCC...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCTTCCCTCTTTCTGTTTaGAATTCCAGCCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSFPLSV*NSSPAE
Trigger: CTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAA...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATCAGGCCTGGAGACACTaGACTAGGGAGATAGATTTG +
Preference number: 2 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNQAWRH*TREIDL
Trigger: CAAATCTATCTCCCTAGTGCAGTGTCTCCAGGCCTG...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCATGTTCAGCCACCAGATaGAAATTTCATGAGATATCC +
Preference number: 2 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSCSATR*KFHEIS
Trigger: GGATATCTCATGAAATTTGCATCTGGTGGCTGAACA...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGTCTGAGCTGCCCTTCTaGAGTGTGCTGAGAAACACC +
Preference number: 2 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKSELPF*SVLRNT
Trigger: GGTGTTTCTCAGCACACTGCAGAAGGGCAGCTCAGA...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGATGCTGAATGGGCCCTaGATTCTTCTGAGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKMLNGP*ILLSCP
Trigger: AGGGCAGCTCAGAAGAATGCAGGGCCCATTCAGCAT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGAGAGTTCGGGAGGAGCTaGCTGCGCCTTGTACCGGCT +
Preference number: 2 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGEFGRS*LRLVPA
Trigger: AGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTC...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615680.4
3UTR-3UTR CCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCATGGAAGCAGCATTTCTaGGGCGTCATCAGTACATCT +
Preference number: 2 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAWKQHF*GVISTS
Trigger: AGATGTACTGATGACGCCCCAGAAATGCTGCTTCCA...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAAAGAAGAAAGAACCGTaGGTGTGTCGAAGTTATAAA +
Preference number: 2 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSKKKEP*VCRSYK
Trigger: TTTATAACTTCGACACACGCACGGTTCTTTCTTCTT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGCTGGGTCAAGCTCTTTaGCACAAACCCAATTCCCTC +
Preference number: 2 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLLGQAL*HKPNSL
Trigger: GAGGGAATTGGGTTTGTGGCAAAGAGCTTGACCCAG...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCCTCCAGTCCCCTTGTaGCCCAGCTCTCCTATGTGT +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLPPVPL*PSSPMC
Trigger: ACACATAGGAGAGCTGGGGCACAAGGGGACTGGAGG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 90 bp CCAGCCCTGCAGAGCACCGGGCAATTTATTGCTCTTTTCCACCAGTaGTTTCTTTCCTGTAGATGTCTGACACTGAGTAGAGAGACCCTC +
Preference number: 2 (lower is better)
Translates to: PALQSTGQFIALFHQ*FLSCRCLTLSRETL
Trigger: GAGGGTCTCTCTACTCAGTGTCAGACATCTACAGGAAAGAAACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTGCTCTGCAGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCCTGCAGATCCTAGCTTaGCTGATGAAAACATTCATT +
Preference number: 2 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGLQILA*LMKTFI
Trigger: AATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAG...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGTTCCCTCTTTCTGTTTaGAATTCCAGCCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLFPLSV*NSSPAE
Trigger: CTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAA...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATGCGTGGAAAAGCAGGTaGGAAAAATCACAGGATCTT +
Preference number: 2 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNAWKSR*EKSQDL
Trigger: AAGATCCTGTGATTTTTCTCACCTGCTTTTCCACGC...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGACTCAAATTCTACAGTaGTGTGCTGGGATCCCCATG +
Preference number: 2 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKTQILQ*CAGIPM
Trigger: CATGGGGATCCCAGCACATCACTGTAGAATTTGAGT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCACTCAATAAAATTCTATaGACTCAGAGGGTTAACAAG +
Preference number: 2 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSLNKIL*TQRVNK
Trigger: CTTGTTAACCCTCTGAGTGCATAGAATTTTATTGAG...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCCAACACCCCTTGATCTaGAGTAAAATCAAGAAACAT +
Preference number: 2 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASQHPLI*SKIKKH
Trigger: ATGTTTCTTGATTTTACTGCAGATCAAGGGGTGTTG...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGAAAAGGCCTGAGCCATaGACCGCAGGCTCAGTACAC +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLKRPEP*TAGSVH
Trigger: GTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGAGTCAGCATGCCTTGTaGTTGTCTGTTAACCCTCTG +
Preference number: 2 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKSQHAL*LSVNPL
Trigger: CAGAGGGTTAACAGACAAGCACAAGGCATGCTGACT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGCATGTGGAGACAATTTaGGGGGCACCATCTATTTCC +
Preference number: 2 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLHVETI*GAPSIS
Trigger: GGAAATAGATGGTGCCCCCCAAATTGTCTCCACATG...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAGAAGAAACTCAGGCCTaGAGACACTGCACTAGGGAG +
Preference number: 2 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQEETQA*RHCTRE
Trigger: CTCCCTAGTGCAGTGTCTCCAGGCCTGAGTTTCTTC...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 90 bp CCAGAAGAAACTCAGGCCTGGAGACACTGCACTAGGGAGATAGATTaGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCC +
Preference number: 2 (lower is better)
Translates to: PEETQAWRHCTREID*VTRVKIQVSDRTWP
Trigger: GGGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCCCTAGTGCAGTGTCTCCAGGCCTGAGTTTCTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGCTGCCATTCAAGCATTaGGCGCTAGATAGATCAGAT +
Preference number: 2 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLLPFKH*ALDRSD
Trigger: ATCTGATCTATCTAGCGCTCAATGCTTGAATGGCAG...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTGGCGCTAGCAGCAGCTaGTATGGAAGCAGCATTTCT +
Preference number: 2 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFGASSS*YGSSIS
Trigger: AGAAATGCTGCTTCCATATCAGCTGCTGCTAGCGCC...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCTCTGAGCTGCCCTTCTaGAGTGTGCTGAGAAACACC +
Preference number: 2 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGSELPF*SVLRNT
Trigger: GGTGTTTCTCAGCACACTGCAGAAGGGCAGCTCAGA...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGGATGGGCCTGTTAACTaGCACCCATGGGGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMDGPVN*HPWGAG
Trigger: ACCTGCTCCCCATGGGTGGCAGTTAACAGGCCCATC...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR CCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTAGTCTCGGAGGAGCTTaGGGAGTAGTCTTCCGATTC +
Preference number: 2 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFSLGGA*GVVFRF
Trigger: GAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACT...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR-3UTR CCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCATTGTTAGAACATTCTaGATTGTGTTCCCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSIVRTF*IVFPVC
Trigger: GCACACTGGGAACACAATCCAGAATGTTCTAACAAT...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGAAGAAACTCAGGCCTaGAGACACTGCACTAGGGAG +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLEETQA*RHCTRE
Trigger: CTCCCTAGTGCAGTGTCTCCAGGCCTGAGTTTCTTC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGTCTCTGGTTGTCTCGTaGATCCCAGAGCCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLSLVVS*IPEPSK
Trigger: TTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGA...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGGCGCTAGCAGCAGCTaGTATGGAAGCAGCATTTCT +
Preference number: 2 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAGASSS*YGSSIS
Trigger: AGAAATGCTGCTTCCATATCAGCTGCTGCTAGCGCC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCCTTGGGAATACATTTaGGTTGGGCACCTGCCTCTA +
Preference number: 2 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGPWEYI*VGHLPL
Trigger: TAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGG...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGCAGATGCAAATTTCATaGGATATCCCTCTCTGGTTG +
Preference number: 2 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKQMQIS*DIPLWL
Trigger: CAACCAGAGAGGGATATCTCATGAAATTTGCATCTG...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAAAGAAGAAAGAACCGTaGGTGTGTCGAAGTTATAAA +
Preference number: 2 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAKKKEP*VCRSYK
Trigger: TTTATAACTTCGACACACGCACGGTTCTTTCTTCTT...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTCTGGGTCAAGCTCTTTaGCACAAACCCAATTCCCTC +
Preference number: 2 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFLGQAL*HKPNSL
Trigger: GAGGGAATTGGGTTTGTGGCAAAGAGCTTGACCCAG...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCCTCCAGTCCCCTTGTaGCCCAGCTCTCCTATGTGT +
Preference number: 2 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEPPVPL*PSSPMC
Trigger: ACACATAGGAGAGCTGGGGCACAAGGGGACTGGAGG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACATGTGGAGACAATTTaGGGGGCACCATCTATTTCC +
Preference number: 2 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQHVETI*GAPSIS
Trigger: GGAAATAGATGGTGCCCCCCAAATTGTCTCCACATG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACACCAACACTCTTTCTaGTGTTCTGTGCCCCCTACC +
Preference number: 2 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKHQHSF*CSVPPT
Trigger: GGTAGGGGGCACAGAACACCAGAAAGAGTGTTGGTG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCTCTACAGTGATGTGCTaGGATCCCCATGCTGAATGG +
Preference number: 2 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGSTVMC*DPHAEW
Trigger: CCATTCAGCATGGGGATCCCAGCACATCACTGTAGA...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGTCTACAGTGATGTGCTaGGATCCCCATGCTGAATGG +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLSTVMC*DPHAEW
Trigger: CCATTCAGCATGGGGATCCCAGCACATCACTGTAGA...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACTGCCATTCAAGCATTaGGCGCTAGATAGATCAGAT +
Preference number: 2 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQLPFKH*ALDRSD
Trigger: ATCTGATCTATCTAGCGCTCAATGCTTGAATGGCAG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGCTGCAGATCCTAGCTTaGCTGATGAAAACATTCATT +
Preference number: 2 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLLQILA*LMKTFI
Trigger: AATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAG...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCACTCAAATTCTACAGTaGTGTGCTGGGATCCCCATG +
Preference number: 2 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGTQILQ*CAGIPM
Trigger: CATGGGGATCCCAGCACATCACTGTAGAATTTGAGT...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACTGGGTCAAGCTCTTTaGCACAAACCCAATTCCCTC +
Preference number: 2 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKLGQAL*HKPNSL
Trigger: GAGGGAATTGGGTTTGTGGCAAAGAGCTTGACCCAG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACTGCAGGTAGGTCTCTaGCCATTGCATTCTTCACAC +
Preference number: 2 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKLQVGL*PLHSSH
Trigger: GTGTGAAGAATGCAATGGGCAGAGACCTACCTGCAG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCCCAATTCCCTCCACTTaGGATGCAGAACTCACTGCA +
Preference number: 2 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAPIPST*DAELTA
Trigger: TGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGG...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCATGTGGAGACAATTTaGGGGGCACCATCTATTTCC +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLHVETI*GAPSIS
Trigger: GGAAATAGATGGTGCCCCCCAAATTGTCTCCACATG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCTGGAAGCAGCATTTCTaGGGCGTCATCAGTACATCT +
Preference number: 2 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGWKQHF*GVISTS
Trigger: AGATGTACTGATGACGCCCCAGAAATGCTGCTTCCA...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGTGGAAGCAGCATTTCTaGGGCGTCATCAGTACATCT +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLWKQHF*GVISTS
Trigger: AGATGTACTGATGACGCCCCAGAAATGCTGCTTCCA...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCGCGTGGAAAAGCAGGTaGGAAAAATCACAGGATCTT +
Preference number: 2 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGAWKSR*EKSQDL
Trigger: AAGATCCTGTGATTTTTCTCACCTGCTTTTCCACGC...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGAAGAAGAAAGAACCGTaGGTGTGTCGAAGTTATAAA +
Preference number: 2 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLKKKEP*VCRSYK
Trigger: TTTATAACTTCGACACACGCACGGTTCTTTCTTCTT...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCATCTGAGCTGCCCTTCTaGAGTGTGCTGAGAAACACC +
Preference number: 2 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSSELPF*SVLRNT
Trigger: GGTGTTTCTCAGCACACTGCAGAAGGGCAGCTCAGA...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR GCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCAATTCTACAGTGATGTaGTGGGATCCCCATGCTGAA +
Preference number: 2 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGNSTVM*WDPHAE
Trigger: TTCAGCATGGGGATCCCAGCACATCACTGTAGAATT...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGAGTCTCGGAGGAGCTTaGGGAGTAGTCTTCCGATTC +
Preference number: 2 (lower is better)
Translates to: AVELLHSLGIVLCFIFLESLGGA*GVVFRF
Trigger: GAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR-3UTR CCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCTGGAAGCAGCATTTCTaGGGCGTCATCAGTACATCT +
Preference number: 2 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAWKQHF*GVISTS
Trigger: AGATGTACTGATGACGCCCCAGAAATGCTGCTTCCA...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGGAATACATTTGAGTTaGGCACCTGCCTCTAAGACA +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLGIHLS*APASKT
Trigger: TGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGAAAAGCAAAGCAATCTaGATACACCAATGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKKSKAI*IHQCSQ
Trigger: CTGACTACATTGGTGTATCCAGATTGCTTTGCTTTT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 90 bp AGCAAAGCAATCTGGATACACCAATGTAGTCAGCATGCCTTGTGCTaGTCTGTTAACCCTCTGAGTACATCTCTGACATTCAGGATCTTG +
Preference number: 2 (lower is better)
Translates to: SKAIWIHQCSQHALC*SVNPLSTSLTFRIL
Trigger: CAAGATCCTGAATGTCAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTGGTGTATCCAGATTGCTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 90 bp GCTAAAAGCAAAGCAATCTGGATACACCAATGTAGTCAGCATGCCTaGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGACATTCAGG +
Preference number: 2 (lower is better)
Translates to: AKSKAIWIHQCSQHA*CLSVNPLSTSLTFR
Trigger: CCTGAATGTCAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTGGTGTATCCAGATTGCTTTGCTTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 90 bp GAATGGGGAAGAAGTTGGAAAGAGAAGGAAGTAAACCTTCACTCTTaGGTACAGCCCTGTATAGCAAACTTCAGCCTGGGGCACATTTTT +
Preference number: 2 (lower is better)
Translates to: EWGRSWKEKEVNLHS*VQPCIANFSLGHIF
Trigger: AAAAATGTGCCCCAGGCTGAAGTTTGCTATACAGGGCTGTACCAAAGAGTGAAGGTTTACTTCCTTCTCTTTCCAACTTCTTCCCCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR TCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTCTTCCGATTCCGAGTTaGGTTCGGGAGGAGCTGGCT +
Preference number: 2 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSLPIPS*VREELA
Trigger: AGCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAG...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR-3UTR TCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGCGTGGAAAAGCAGGTaGGAAAAATCACAGGATCTT +
Preference number: 2 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAAWKSR*EKSQDL
Trigger: AAGATCCTGTGATTTTTCTCACCTGCTTTTCCACGC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCTCAAGATTTCTACTTaGCTGGTCACATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLLKIST*LVTFHC
Trigger: ACAGTGGAATGTGACCAGTCAAGTAGAAATCTTGAG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGTTTAAGCCTCTCCACTaGAGTTCCTGTTTCCCACCA +
Preference number: 2 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMFKPLH*SSCFPP
Trigger: TGGTGGGAAACAGGAACTTCAGTGGAGAGGCTTAAA...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCACCGGGCAATTTATTaGTCTTTTCCACCAGTTGTT +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLHRAIY*SFPPVV
Trigger: AACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCATTGTGTTCCCAGTGTaGTTTCTCCTCAGCCATCTT +
Preference number: 2 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAIVFPV*FLLSHL
Trigger: AAGATGGCTGAGGAGAAAGCACACTGGGAACACAAT...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAATTGTGTTCCCAGTGTaGTTTCTCCTCAGCCATCTT +
Preference number: 2 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKIVFPV*FLLSHL
Trigger: AAGATGGCTGAGGAGAAAGCACACTGGGAACACAAT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCAGGCCTGGAGACACTaGACTAGGGAGATAGATTTG +
Preference number: 2 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEQAWRH*TREIDL
Trigger: CAAATCTATCTCCCTAGTGCAGTGTCTCCAGGCCTG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCACTGCAGGTAGGTCTCTaGCCATTGCATTCTTCACAC +
Preference number: 2 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSLQVGL*PLHSSH
Trigger: GTGTGAAGAATGCAATGGGCAGAGACCTACCTGCAG...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR TCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTCTGCAGATCCTAGCTTaGCTGATGAAAACATTCATT +
Preference number: 2 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFLQILA*LMKTFI
Trigger: AATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAG...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTTCCCTCTTTCTGTTTaGAATTCCAGCCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEFPLSV*NSSPAE
Trigger: CTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGGCAGGAAGGTCTCATTaGACACAAAACACCAAGTGT +
Preference number: 2 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMAGRSH*TQNTKC
Trigger: ACACTTGGTGTTTTGTGTTCAATGAGACCTTCCTGC...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR GCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCTCAATAAAATTCTATaGACTCAGAGGGTTAACAAG +
Preference number: 2 (lower is better)
Translates to: LFATNPIPSTWDAELTATLNKIL*TQRVNK
Trigger: CTTGTTAACCCTCTGAGTGCATAGAATTTTATTGAG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGATTGTTAGAACATTCTaGATTGTGTTCCCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLIVRTF*IVFPVC
Trigger: GCACACTGGGAACACAATCCAGAATGTTCTAACAAT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCGAAGAAACTCAGGCCTaGAGACACTGCACTAGGGAG +
Preference number: 2 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFEETQA*RHCTRE
Trigger: CTCCCTAGTGCAGTGTCTCCAGGCCTGAGTTTCTTC...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGCACCGGGCAATTTATTaGTCTTTTCCACCAGTTGTT +
Preference number: 2 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMHRAIY*SFPPVV
Trigger: AACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTG...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR GCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATATGCTGAATGGGCCCTaGATTCTTCTGAGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: IHQRLMSMASEKLSLENYMLNGP*ILLSCP
Trigger: AGGGCAGCTCAGAAGAATGCAGGGCCCATTCAGCAT...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR CCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAGGAATACATTTGAGTTaGGCACCTGCCTCTAAGACA +
Preference number: 2 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSGIHLS*APASKT
Trigger: TGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCC...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCTCAATAAAATTCTATaGACTCAGAGGGTTAACAAG +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLLNKIL*TQRVNK
Trigger: CTTGTTAACCCTCTGAGTGCATAGAATTTTATTGAG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATCTGCAGGTAGGTCTCTaGCCATTGCATTCTTCACAC +
Preference number: 2 (lower is better)
Translates to: IHQRLMSMASEKLSLENYLQVGL*PLHSSH
Trigger: GTGTGAAGAATGCAATGGGCAGAGACCTACCTGCAG...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGCTCAGTACACTAGATaGTGTAGCAATATAGTTAAT +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLAQYTR*CSNIVN
Trigger: ATTAACTATATTGCTACAGCATCTAGTGTACTGAGC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCATCTTACCCTCTAAACTaGATGCAAAGTAAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSSYPLN*MQSKGL
Trigger: CAGACCCTTACTTTGCATGCAGTTTAGAGGGTAAGA...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR CCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCCATGTGGAGACAATTTaGGGGGCACCATCTATTTCC +
Preference number: 2 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFHVETI*GAPSIS
Trigger: GGAAATAGATGGTGCCCCCCAAATTGTCTCCACATG...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGAGATTTCTACTTGACTaGTCACATTCCACTGTTTAT +
Preference number: 2 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLRFLLD*SHSTVY
Trigger: ATAAACAGTGGAATGTGACCAGTCAAGTAGAAATCT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 90 bp TGCACATGGAATTGTCTTGCCAGTGGTTTATTCACTGAAAACTTATaGTTAGAACATTCTGGATTGTGTTCCCAGTGTGCTTTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: CTWNCLASGLFTENL*LEHSGLCSQCAFSS
Trigger: TGAGGAGAAAGCACACTGGGAACACAATCCAGAATGTTCTAACAATAAGTTTTCAGTGAATAAACCACTGGCAAGACAATTCCATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCCTGCCATTCAAGCATTaGGCGCTAGATAGATCAGAT +
Preference number: 2 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFLPFKH*ALDRSD
Trigger: ATCTGATCTATCTAGCGCTCAATGCTTGAATGGCAG...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAACTGCAGATCCTAGCTTaGCTGATGAAAACATTCATT +
Preference number: 2 (lower is better)
Translates to: FILIFLGDYIGNLKVHMELQILA*LMKTFI
Trigger: AATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAG...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATTTCCCTCTTTCTGTTTaGAATTCCAGCCCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: IHQRLMSMASEKLSLENYFPLSV*NSSPAE
Trigger: CTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAA...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR TCA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTATATTGGGTCCGTGTATaGAATTCATCTAGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLYWVRV*NSSRAR
Trigger: CCTGGCTCTAGATGAATTTCATACACGGACCCAATA...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
3UTR-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTGTTCAGCCACCAGATaGAAATTTCATGAGATATCC +
Preference number: 2 (lower is better)
Translates to: AVELLHSLGIVLCFIFLECSATR*KFHEIS
Trigger: GGATATCTCATGAAATTTGCATCTGGTGGCTGAACA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGAAGAAGAAAGAACCGTaGGTGTGTCGAAGTTATAAA +
Preference number: 2 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEKKKEP*VCRSYK
Trigger: TTTATAACTTCGACACACGCACGGTTCTTTCTTCTT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCCACCGGGCAATTTATTaGTCTTTTCCACCAGTTGTT +
Preference number: 2 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFHRAIY*SFPPVV
Trigger: AACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTG...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR TCA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTATTTGCTTCAGAAATGTaGAACCTTCACCCAATCACA +
Preference number: 2 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLFASEM*NLHPIT
Trigger: TGTGATTGGGTGAAGGTTTCACATTTCTGAAGCAAA...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
3UTR-3UTR CCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCATGTTCCTCATTAATATaGAATCTACCTACACACCAA +
Preference number: 2 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSCSSLI*NLPTHQ
Trigger: TTGGTGTGTAGGTAGATTCCATATTAATGAGGAACA...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR GCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCCAACACCCCTTGATCTaGAGTAAAATCAAGAAACAT +
Preference number: 2 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFQHPLI*SKIKKH
Trigger: ATGTTTCTTGATTTTACTGCAGATCAAGGGGTGTTG...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR GCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATTGTTCAGCCACCAGATaGAAATTTCATGAGATATCC +
Preference number: 2 (lower is better)
Translates to: IHQRLMSMASEKLSLENYCSATR*KFHEIS
Trigger: GGATATCTCATGAAATTTGCATCTGGTGGCTGAACA...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR TCA 72 bp CGGAGGAGCTTGGGGAGTAGTCTTCCGATTCCGAGTTaGGTTCGGGAGGAGCTGGCTGCGCCTTGTACCGGC +
Preference number: 3 (lower is better)
Translates to: RRSLGSSLPIPS*VREELAAPCTG
Trigger: GCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGACTACTCCCCAAGCTCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR-3UTR CAA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCATCTTCCGATTCCGAGTaGAGTTCGGGAGGAGCTGGC +
Preference number: 3 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSSSDSE*SSGGAG
Trigger: GCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGA...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR CCA 72 bp GGGCGAGTTAGGGGAGCGAACAGTCTCGGAGGAGCTTaGGGAGTAGTCTTCCGATTCCGAGTTGAGTTCGGG +
Preference number: 3 (lower is better)
Translates to: GRVRGANSLGGA*GVVFRFRVEFG
Trigger: CCCGAACTCAACTCGGAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTGTTCGCTCCCCTAACTCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR-3UTR CAA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCCCCAATTCCCTCCACTaGGGATGCAGAACTCACTGC +
Preference number: 3 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASPNSLH*GCRTHC
Trigger: GCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGG...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 72 bp GTCCAGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTaGGCCATGCACCGCAGGCTCAGTACACTAGATGCT +
Preference number: 3 (lower is better)
Translates to: VQSPPRRRWEKA*AMHRRLSTLDA
Trigger: AGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCATCTTCCGATTCCGAGTaGAGTTCGGGAGGAGCTGGC +
Preference number: 3 (lower is better)
Translates to: HLPLRHPRRILSEHCGDASSDSE*SSGGAG
Trigger: GCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGA...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR-3UTR CAA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCCCCAATTCCCTCCACTaGGGATGCAGAACTCACTGC +
Preference number: 3 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGPNSLH*GCRTHC
Trigger: GCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGG...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 72 bp GACTCCCTGAGAGTCTGCGCTGGCGCTAGCAGCAGCTaGTATGGAAGCAGCATTTCTGGGGCGTCATCAGTA +
Preference number: 3 (lower is better)
Translates to: DSLRVCAGASSS*YGSSISGASSV
Trigger: TACTGATGACGCCCCAGAAATGCTGCTTCCATATCAGCTGCTGCTAGCGCCAGCGCAGACTCTCAGGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 72 bp CCCTGCATTCTTCTGAGCTGCCCTTCTGCAGTGTGCTaGGAAACACCCCCTAGCTTCACACGGTCCAGAGTC +
Preference number: 3 (lower is better)
Translates to: PCILLSCPSAVC*ETPPSFTRSRV
Trigger: GACTCTGGACCGTGTGAAGCTAGGGGGTGTTTCTCAGCACACTGCAGAAGGGCAGCTCAGAAGAATGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCAGTCTCGGAGGAGCTaGGGGAGTAGTCTTCCGATT +
Preference number: 3 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSQSRRS*GSSLPI
Trigger: AATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR-3UTR CAA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAAGAGCCCAGCAAACCTaGGGAATACATTTGAGTTGG +
Preference number: 3 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSRAQQT*GIHLSW
Trigger: CCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCATTCACACTTTTAGAGTaGAGGCCAGGCTGTAGAGCT +
Preference number: 3 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSFTLLE*RPGCRA
Trigger: AGCTCTACAGCCTGGCCTCAACTCTAAAAGTGTGAA...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATCAGTCTCGGAGGAGCTaGGGGAGTAGTCTTCCGATT +
Preference number: 3 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNQSRRS*GSSLPI
Trigger: AATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTG...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
3UTR-3UTR CAA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGCACATGGAATTGTCTaGCCAGTGGTTTATTCACTG +
Preference number: 3 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSAHGIV*PVVYSL
Trigger: CAGTGAATAAACCACTGGCAAGACAATTCCATGTGC...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 72 bp TGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTaGGTTGGGCACCTGCCTCTAAGACACCCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: WIPEPSKPWEYI*VGHLPLRHPRR
Trigger: TCTCCTGGGGTGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CCA 72 bp CCCAGAGCCCAGCAAACCTTGGGAATACATTTGAGTTaGGCACCTGCCTCTAAGACACCCCAGGAGAATCCT +
Preference number: 3 (lower is better)
Translates to: PRAQQTLGIHLS*APASKTPQENP
Trigger: AGGATTCTCCTGGGGTGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 72 bp GATGGGCCTGTTAACTGCCACCCATGGGGAGCAGGTTaGAGGAAGGTCTCATTGAACACAAAACACCAAGTG +
Preference number: 3 (lower is better)
Translates to: DGPVNCHPWGAG*RKVSLNTKHQV
Trigger: CACTTGGTGTTTTGTGTTCAATGAGACCTTCCTGCAACCTGCTCCCCATGGGTGGCAGTTAACAGGCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR CCA 72 bp AATTCTACAGTGATGTGCTGGGATCCCCATGCTGAATaGGCCCTGCATTCTTCTGAGCTGCCCTTCTGCAGT +
Preference number: 3 (lower is better)
Translates to: NSTVMCWDPHAE*ALHSSELPFCS
Trigger: ACTGCAGAAGGGCAGCTCAGAAGAATGCAGGGCCCATTCAGCATGGGGATCCCAGCACATCACTGTAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAACTGCAGATCCTAGCTaGACTGATGAAAACATTCAT +
Preference number: 3 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSTADPS*TDENIH
Trigger: ATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAGT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCGCACCGGGCAATTTATaGCTCTTTTCCACCAGTTGT +
Preference number: 3 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSAPGNL*LFSTSC
Trigger: ACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTGC...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAACCATAGTTTCAGGGTaGAAGAGTAAAAATGCAGCA +
Preference number: 3 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSTIVSG*KSKNAA
Trigger: TGCTGCATTTTTACTCTTCAACCCTGAAACTATGGT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCGCTCTTTTCCACCAGTaGTTTCTTTCCTGTAGATGT +
Preference number: 3 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSALFHQ*FLSCRC
Trigger: ACATCTACAGGAAAGAAACAACTGGTGGAAAAGAGC...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAATTCTCCTCAGCCATCTaGCAAAGCAACTGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQFSSAI*QSNCLQ
Trigger: CTGGAGGCAGTTGCTTTGCAAGATGGCTGAGGAGAA...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGTTCACACTTTTAGAGTaGAGGCCAGGCTGTAGAGCT +
Preference number: 3 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKFTLLE*RPGCRA
Trigger: AGCTCTACAGCCTGGCCTCAACTCTAAAAGTGTGAA...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 72 bp GGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATaGTGTAGCAATATAGTTAATGCCCACAGAAAAAGC +
Preference number: 3 (lower is better)
Translates to: GLSHAPQAQYTR*CSNIVNAHRKS
Trigger: GCTTTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CCA 72 bp GGGGCGTCATCAGTACATCTTCATGTGGAGACAATTTaGGGGGCACCATCTATTTCCTGGGTCAAGCTCTTT +
Preference number: 3 (lower is better)
Translates to: GASSVHLHVETI*GAPSISWVKLF
Trigger: AAAGAGCTTGACCCAGGAAATAGATGGTGCCCCCCAAATTGTCTCCACATGAAGATGTACTGATGACGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGATTGGCCTTAACCCTTaGAGGACTCTATTAGCAGCA +
Preference number: 3 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKIGLNP*RTLLAA
Trigger: TGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAAT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAACTGCAGATCCTAGCTaGACTGATGAAAACATTCAT +
Preference number: 3 (lower is better)
Translates to: HLPLRHPRRILSEHCGDATADPS*TDENIH
Trigger: ATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAGT...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCCCCAATTCCCTCCACTaGGGATGCAGAACTCACTGC +
Preference number: 3 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAPNSLH*GCRTHC
Trigger: GCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGG...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGATTCCCTCTTTCTGTTaGAAATTCCAGCCCTGCAGA +
Preference number: 3 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKIPSFC*KFQPCR
Trigger: TCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAAT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCACCTTGGGAATACATTaGAGTTGGGCACCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGTLGIH*SWAPAS
Trigger: AGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGT...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCACCCAATTCCCTCCACTaGGGATGCAGAACTCACTGC +
Preference number: 3 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSPNSLH*GCRTHC
Trigger: GCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGG...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR CAA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAACCTTGGGAATACATTaGAGTTGGGCACCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKTLGIH*SWAPAS
Trigger: AGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGCACCGGGCAATTTATaGCTCTTTTCCACCAGTTGT +
Preference number: 3 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKAPGNL*LFSTSC
Trigger: ACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTGC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTTCTCCTCAGCCATCTaGCAAAGCAACTGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEFSSAI*QSNCLQ
Trigger: CTGGAGGCAGTTGCTTTGCAAGATGGCTGAGGAGAA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCGCACATGGAATTGTCTaGCCAGTGGTTTATTCACTG +
Preference number: 3 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGAHGIV*PVVYSL
Trigger: CAGTGAATAAACCACTGGCAAGACAATTCCATGTGC...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAAAGGTGCACATGGAATaGTCTTGCCAGTGGTTTATT +
Preference number: 3 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQKVHME*SCQWFI
Trigger: AATAAACCACTGGCAAGACAATTCCATGTGCACCTT...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 72 bp ATCCTCTCTGAGCACTGTGGTGATGCACAGAACCTGTaGATCCCCATTCTAAAATGGAATCTGTTCCAGAAG +
Preference number: 3 (lower is better)
Translates to: ILSEHCGDAQNL*IPILKWNLFQK
Trigger: CTTCTGGAACAGATTCCATTTTAGAATGGGGATTCACAGGTTCTGTGCATCACCACAGTGCTCAGAGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 72 bp CACAGTAATATTAAGAAAGCTCTCCCTCAGCACGATTaGGCTTCAGCGCAAGGGATAGAGTTGTCTAGTGGA +
Preference number: 3 (lower is better)
Translates to: HSNIKKALPQHD*ASAQGIELSSG
Trigger: TCCACTAGACAACTCTATCCCTTGCGCTGAAGCTCAATCGTGCTGAGGGAGAGCTTTCTTAATATTACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR GCA 72 bp GATCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTaGAGAGCACCGGGCAATTTATTGCTCTTTTCCACC +
Preference number: 3 (lower is better)
Translates to: DLIPSFCLKFQP*RAPGNLLLFST
Trigger: GGTGGAAAAGAGCAATAAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 72 bp GCTCTCCTATGTGTGGATTTCATACTAGATGTAGATTaGACAGTGATGACCACAGTGCGTGGAAAAGCAGGT +
Preference number: 3 (lower is better)
Translates to: ALLCVDFILDVD*TVMTTVRGKAG
Trigger: ACCTGCTTTTCCACGCACTGTGGTCATCACTGTGCAATCTACATCTAGTATGAAATCCACACATAGGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 72 bp TTATTCAGCATAGATCACTCAAATTCTACAGTGATGTaGTGGGATCCCCATGCTGAATGGGCCCTGCATTCT +
Preference number: 3 (lower is better)
Translates to: LFSIDHSNSTVM*WDPHAEWALHS
Trigger: AGAATGCAGGGCCCATTCAGCATGGGGATCCCAGCACATCACTGTAGAATTTGAGTGATCTATGCTGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 72 bp GCAATCTGGATACACCAATGTAGTCAGCATGCCTTGTaGTTGTCTGTTAACCCTCTGAGTACATCTCTGACA +
Preference number: 3 (lower is better)
Translates to: AIWIHQCSQHAL*LSVNPLSTSLT
Trigger: TGTCAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTGGTGTATCCAGATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTGCTCTTTTCCACCAGTaGTTTCTTTCCTGTAGATGT +
Preference number: 3 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFALFHQ*FLSCRC
Trigger: ACATCTACAGGAAAGAAACAACTGGTGGAAAAGAGC...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGCTCTTTTCCACCAGTaGTTTCTTTCCTGTAGATGT +
Preference number: 3 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLALFHQ*FLSCRC
Trigger: ACATCTACAGGAAAGAAACAACTGGTGGAAAAGAGC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCTGCTACTTTGTGATTTaGCGTGTTATCACTTCCGGA +
Preference number: 3 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGCYFVI*RVITSG
Trigger: TCCGGAAGTGATAACACGCAAAATCACAAAGTAGCA...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGATGCAGGAAGGTCTCATaGAACACAAAACACCAAGTG +
Preference number: 3 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGCRKVS*NTKHQV
Trigger: CACTTGGTGTTTTGTGTTCAATGAGACCTTCCTGCA...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR CAA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAGCACCGGGCAATTTATaGCTCTTTTCCACCAGTTGT +
Preference number: 3 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEAPGNL*LFSTSC
Trigger: ACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTGC...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGAACTCAAGATTTCTACTaGACTGGTCACATTCCACTG +
Preference number: 3 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGTQDFY*TGHIPL
Trigger: CAGTGGAATGTGACCAGTCAAGTAGAAATCTTGAGT...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR TCA 72 bp GAGAAAAATCACAGGATCTTATTCCCTCTTTCTGTTTaGAATTCCAGCCCTGCAGAGCACCGGGCAATTTAT +
Preference number: 3 (lower is better)
Translates to: EKNHRILFPLSV*NSSPAEHRAIY
Trigger: ATAAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGATCCTGTGATTTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 72 bp CAAAACAGAGAACATAGGTACTGTTCAGCCACCAGATaGAAATTTCATGAGATATCCCTCTCTGGTTGTCTC +
Preference number: 3 (lower is better)
Translates to: QNREHRYCSATR*KFHEISLSGCL
Trigger: GAGACAACCAGAGAGGGATATCTCATGAAATTTGCATCTGGTGGCTGAACAGTACCTATGTTCTCTGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CCA 72 bp CTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATaGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGT +
Preference number: 3 (lower is better)
Translates to: LHLQKFWLYIAT*LVCSCTQYWVR
Trigger: ACGGACCCAATATTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
3UTR-3UTR CAA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGATTCCCTCTTTCTGTTaGAAATTCCAGCCCTGCAGA +
Preference number: 3 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEIPSFC*KFQPCR
Trigger: TCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAAT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGCTACCATCTTGGATCTaGGTGCTTTCCAAAATTCTG +
Preference number: 3 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMLPSWI*VLSKIL
Trigger: CAGAATTTTGGAAAGCACCAAGATCCAAGATGGTAG...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR TCA 72 bp TTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATaGAATTCATCTAGAGCCAGGCCCTGTACAAAAATC +
Preference number: 3 (lower is better)
Translates to: LVCSCTQYWVRV*NSSRARPCTKI
Trigger: GATTTTTGTACAGGGCCTGGCTCTAGATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379892.4
3UTR-3UTR CAA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCGCTCTTTTCCACCAGTaGTTTCTTTCCTGTAGATGT +
Preference number: 3 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFALFHQ*FLSCRC
Trigger: ACATCTACAGGAAAGAAACAACTGGTGGAAAAGAGC...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR-3UTR CAA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGAAAAATCTCAGCATTTaGTGTTCAAACTCTCCCCAA +
Preference number: 3 (lower is better)
Translates to: KKTPSAEILALYCHMVSVKNLSI*CSNSPQ
Trigger: TTGGGGAGAGTTTGAACACAAAATGCTGAGATTTTT...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379892.4
3UTR-3UTR CAA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTTGTACTCAATATaGGGTCCGTGTATGAAATTC +
Preference number: 3 (lower is better)
Translates to: KKTPSAEILALYCHMVSVFLYSI*GPCMKF
Trigger: GAATTTCATACACGGACCCAATATTGAGTACAAGAA...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
3UTR TCA 72 bp TACCTGAAAACACTTTCAGTTCTGCCATTCAAGCATTaGGCGCTAGATAGATCAGATGAAACTGTTTTACAC +
Preference number: 3 (lower is better)
Translates to: YLKTLSVLPFKH*ALDRSDETVLH
Trigger: GTGTAAAACAGTTTCATCTGATCTATCTAGCGCTCAATGCTTGAATGGCAGAACTGAAAGTGTTTTCAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR TCA 72 bp CTAGTGTGTAATTACATACAAACTAAAGATTCCTTCTaGCGTCCTAGGAACCCCATTTGTTACCGTTTCATG +
Preference number: 3 (lower is better)
Translates to: LVCNYIQTKDSF*RPRNPICYRFM
Trigger: CATGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTATGTAATTACACACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR-3UTR CAA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCACTGCAGATCCTAGCTaGACTGATGAAAACATTCAT +
Preference number: 3 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFTADPS*TDENIH
Trigger: ATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAGT...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR GCA 72 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTaGCACATGGTTAGTGTGTTCTTGTACTCAATATTG +
Preference number: 3 (lower is better)
Translates to: KKTPSAEILALY*HMVSVFLYSIL
Trigger: CAATATTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCGAGGAGCCGCCATGCTaGGAGCTCCTCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASEEPPC*ELLCFR
Trigger: GCGGAAGCAGAGGAGCTCTCAGCATGGCGGCTCCTC...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCTCGGGAGGAGCTGGCTaGGCCTTGTACCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASSGGAG*ALYRLL
Trigger: GAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGA...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCCGATGGGAAAAGGCCTaGGCCATGCACCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASRWEKA*AMHRRL
Trigger: GAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCG...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCGGCTTCCTGGGCTGGTaGGTGATGGGCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASGFLGW*VMGLAT
Trigger: AGTCGCCAAGCCCATCACCCACCAGCCCAGGAAGCC...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCGAGTTCGGGAGGAGCTaGCTGCGCCTTGTACCGGCT +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASEFGRS*LRLVPA
Trigger: AGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTC...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCCTTCTTCTCGGAGCTaGGCGTCTGCAGCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSPSSRS*ASAACG
Trigger: CCCGCACGCTGCAGACGCTCAGCTCCGAGAAGAAGG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAAGGGGTTCCATTAACTaGGCTGGTGGAGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSRGSIN*AGGGRG
Trigger: TCCCCTGCCTCCACCAGCTCAGTTAATGGAACCCCT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTTGGCGACTTGCCTaGGCGCGGAGTAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGAWRLA*ARSREL
Trigger: CAGCTCTCTACTCCGCGCTCAGGCAAGTCGCCAAGC...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCGAGGAGCCGCCATGCTaGGAGCTCCTCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSEEPPC*ELLCFR
Trigger: GCGGAAGCAGAGGAGCTCTCAGCATGGCGGCTCCTC...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGGGGGCCGTCTACAATaGTGGCCAGTCCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSGGRLQ*WPVQSH
Trigger: GTGACTTTGGACTGGCCACCATTGTAGACGGCCCCC...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCGATGGGAAAAGGCCTaGGCCATGCACCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSRWEKA*AMHRRL
Trigger: GAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCCCTCCAGTCCCCTTGTaGCCCAGCTCTCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASPPVPL*PSSPMC
Trigger: ACACATAGGAGAGCTGGGGCACAAGGGGACTGGAGG...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCCCGTCCTCATTGAAATaGGGCGCTTCGCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASPSSLK*GASHSL
Trigger: GAGGCTGTGCGAAGCGCCGCATTTCAATGAGGACGG...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS-3UTR CCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACTGGGGGCCGCCTCCTaGTGCTGTCCTCGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQLGAAS*CCPRRA
Trigger: AGCCCGGCGAGGACAGCACCAGGAGGCGGCCCCCAG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGGCCGTCTACAATGGTaGCCAGTCCAAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSGRLQW*PVQSHP
Trigger: TGGGTGACTTTGGACTGGCCACCATTGTAGACGGCC...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCGGGGGCCGTCTACAATaGTGGCCAGTCCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASGGRLQ*WPVQSH
Trigger: GTGACTTTGGACTGGCCACCATTGTAGACGGCCCCC...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAGAGTTCGGGAGGAGCTaGCTGCGCCTTGTACCGGCT +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAEFGRS*LRLVPA
Trigger: AGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTC...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGGAGGAGCCGCCATGCTaGGAGCTCCTCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKEEPPC*ELLCFR
Trigger: GCGGAAGCAGAGGAGCTCTCAGCATGGCGGCTCCTC...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCCTTCCGATTCCGAGTTaGGTTCGGGAGGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGLPIPS*VREELA
Trigger: AGCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAG...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGGCGCTAGCAGCAGCTaGTATGGAAGCAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSGASSS*YGSSIS
Trigger: AGAAATGCTGCTTCCATATCAGCTGCTGCTAGCGCC...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGGCCCTGCATTCTTCTaGGCTGCCCTTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGGPAFF*AALLQC
Trigger: ACACTGCAGAAGGGCAGCTCAGAAGAATGCAGGGCC...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCACCTCGGCTGTATCTCTaGGCCTTATCCCGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAPRLYL*ALSRSS
Trigger: CGACGAGCGGGATAAGGCGCAGAGATACAGCCGAGG...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCCCACGTATGTTGGGGTaGCACAGACTGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASPRMLG*HRLCTG
Trigger: CCCTGTACACAGTCTGTGGCACCCCAACATACGTGG...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCAAACTCCAGCTGCTGTaGTATTCGGCTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASKLQLL*YSAWGL
Trigger: CAGGCCCCAAGCCGAATAGCACAGCAGCTGGAGTTT...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGTCGGGAGGAGCTGGCTaGGCCTTGTACCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLSGGAG*ALYRLL
Trigger: GAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGA...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAATGCTGAATGGGCCCTaGATTCTTCTGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSMLNGP*ILLSCP
Trigger: AGGGCAGCTCAGAAGAATGCAGGGCCCATTCAGCAT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCTGGGGGCCGCCTCCTaGTGCTGTCCTCGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLLGAAS*CCPRRA
Trigger: AGCCCGGCGAGGACAGCACCAGGAGGCGGCCCCCAG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCATGTTCAGCAGAATCCTaGCAGCTTTCCGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSCSAES*QLSVAS
Trigger: TGAAGCCACGGAAAGCTGTCAGGATTCTGCTGAACA...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGGCTTGGCGACTTGCCTaGGCGCGGAGTAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKAWRLA*ARSREL
Trigger: CAGCTCTCTACTCCGCGCTCAGGCAAGTCGCCAAGC...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCACTTCCGATTCCGAGTTaGGTTCGGGAGGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDALPIPS*VREELA
Trigger: AGCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAG...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGCGATGGGAAAAGGCCTaGGCCATGCACCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKRWEKA*AMHRRL
Trigger: GAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCG...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCAAACTCCAGCTGCTGTaGTATTCGGCTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGKLQLL*YSAWGL
Trigger: CAGGCCCCAAGCCGAATAGCACAGCAGCTGGAGTTT...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAAAACCCGTGGTCCAGTaGTATGACAGAAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSKPVVQ*YDRNSS
Trigger: GCTGGAGTTTCTGTCATAGCACTGGACCACGGGTTT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCATGCTGAATGGGCCCTaGATTCTTCTGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASMLNGP*ILLSCP
Trigger: AGGGCAGCTCAGAAGAATGCAGGGCCCATTCAGCAT...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAGGCTTCCTTTGGCAGTaGCCAGTGAAGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAGFLWQ*PVKTLP
Trigger: GGGCAGTGTCTTCACTGGCCACTGCCAAAGGAAGCC...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGACGCCTGGACGGTCCTaGGCTCTTGGTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKTPGRS*ALGGAP
Trigger: AGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGGGCTTCCTGGGCTGGTaGGTGATGGGCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKGFLGW*VMGLAT
Trigger: AGTCGCCAAGCCCATCACCCACCAGCCCAGGAAGCC...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGGCTTGATATCACGGTaGACGATGTTCAGGCTATGC +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSGLISR*TMFRLC
Trigger: GCATAGCCTGAACATCGTCCACCGTGATATCAAGCC...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCACCACTTCCACGGAATaGAGGGAAACCACACAGCAG +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASTTSTE*RETTQQ
Trigger: CTGCTGTGTGGTTTCCCTCCATTCCGTGGAAGTGGT...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCGAAGAAACTCAGGCCTaGAGACACTGCACTAGGGAG +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASEETQA*RHCTRE
Trigger: CTCCCTAGTGCAGTGTCTCCAGGCCTGAGTTTCTTC...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCTCTCTGGTTGTCTCGTaGATCCCAGAGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASSLVVS*IPEPSK
Trigger: TTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGA...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCCACCAACACTCTTTCTaGTGTTCTGTGCCCCCTACC +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASHQHSF*CSVPPT
Trigger: GGTAGGGGGCACAGAACACCAGAAAGAGTGTTGGTG...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCATCTACAGTGATGTGCTaGGATCCCCATGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSSTVMC*DPHAEW
Trigger: CCATTCAGCATGGGGATCCCAGCACATCACTGTAGA...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATAAGCCGAGGTGGTCTTaGCGTTCACCGACCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNKPRWS*RSPTSW
Trigger: CCAACTGGTCGGTGAACGTCAAGACCACCTCGGCTT...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAGAGGAGCCGCCATGCTaGGAGCTCCTCTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQEEPPC*ELLCFR
Trigger: GCGGAAGCAGAGGAGCTCTCAGCATGGCGGCTCCTC...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATCCCAGATGTCCACCTTaGGGCCGTATCCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNPRCPP*GRIQSL
Trigger: CAGAGACTGGATACGGCCTCAAGGTGGACATCTGGG...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATGGCCCTGCATTCTTCTaGGCTGCCCTTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNGPAFF*AALLQC
Trigger: ACACTGCAGAAGGGCAGCTCAGAAGAATGCAGGGCC...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCACTCCAATATGGCAAATaGACTGAGGAGCGTACCCTT +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSLQYGK*TEERTL
Trigger: AAGGGTACGCTCCTCAGTTCATTTGCCATATTGGAG...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCTCTCATCCATCGAGCTaGAGACTTTGGTGGACGCAA +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASSHPSS*RLWWTQ
Trigger: TTGCGTCCACCAAAGTCTGCAGCTCGATGGATGAGA...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAACGATGTTCAGGCTATaGAGGTATTTGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSTMFRL*RYLMAL
Trigger: CAGCGCCATCAAATACCTGCATAGCCTGAACATCGT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCACCAGCTTCAGTGATTTaGTGCCATCTTGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSPASVI*CHLGAH
Trigger: ATGAGCACCAAGATGGCAGCAAATCACTGAAGCTGG...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAAAAAGGCCTGAGCCATaGACCGCAGGCTCAGTACAC +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAKRPEP*TAGSVH
Trigger: GTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTT...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCCCTGACAGCTTTCCGTaGCTTCACGCCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGPDSFP*LHATSD
Trigger: ATCAGAAGTGGCGTGAAGCCACGGAAAGCTGTCAGG...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTACGGTCCTGGGCTCTTaGTGGTGCTCCTGCGGGATG +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATTVLGS*WCSCGM
Trigger: CATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTACGCCTGGACGGTCCTaGGCTCTTGGTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATTPGRS*ALGGAP
Trigger: AGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTGGCTTCCTGGGCTGGTaGGTGATGGGCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATGFLGW*VMGLAT
Trigger: AGTCGCCAAGCCCATCACCCACCAGCCCAGGAAGCC...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCGATTTGCTGCCATCTTaGTGCTCATACACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASDLLPS*CSYTSR
Trigger: CCTGCTGGTGTATGAGCACCAAGATGGCAGCAAATC...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAGGCCGTCTACAATGGTaGCCAGTCCAAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAGRLQW*PVQSHP
Trigger: TGGGTGACTTTGGACTGGCCACCATTGTAGACGGCC...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATGGGGGCCGTCTACAATaGTGGCCAGTCCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNGGRLQ*WPVQSH
Trigger: GTGACTTTGGACTGGCCACCATTGTAGACGGCCCCC...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCATGGAAGCAGCATTTCTaGGGCGTCATCAGTACATCT +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSWKQHF*GVISTS
Trigger: AGATGTACTGATGACGCCCCAGAAATGCTGCTTCCA...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 72 bp GTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTaGAGTTGGGCACCTGCCTCTAAGACACCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VDPRAQQTLGIH*SWAPASKTPQE
Trigger: CTCCTGGGGTGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCTCTGCCGAAGGACATaGTGGACTTCAAGTAGGACC +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSLCRRT*WTSSRT
Trigger: GGTCCTACTTGAAGTCCATCATGTCCTTCGGCAGAG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCCTTCTTCTCGGAGCTaGGCGTCTGCAGCGTGCGGG +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLPSSRS*ASAACG
Trigger: CCCGCACGCTGCAGACGCTCAGCTCCGAGAAGAAGG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCTCCTGGGCTGGTGGGTaGTGGGCTTGGCGACTTGCC +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGSWAGG*WAWRLA
Trigger: GGCAAGTCGCCAAGCCCATCACCCACCAGCCCAGGA...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCCCTTGGGAATACATTTaGGTTGGGCACCTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGPWEYI*VGHLPL
Trigger: TAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGG...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGCTGGGATCCCCATGCTaGATGGGCCCTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKLGSPC*MGPAFF
Trigger: GAAGAATGCAGGGCCCATTCAGCATGGGGATCCCAG...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCACTCAAATTCTACAGTaGTGTGCTGGGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASTQILQ*CAGIPM
Trigger: CATGGGGATCCCAGCACATCACTGTAGAATTTGAGT...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGCAGGAAGGTCTCATTaGACACAAAACACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSAGRSH*TQNTKC
Trigger: ACACTTGGTGTTTTGTGTTCAATGAGACCTTCCTGC...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAACTAAAGATTCCTTCTaGCGTCCTAGGAACCCCATT +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSTKDSF*RPRNPI
Trigger: AATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCATATGGCAAATGAACTaGGGAGCGTACCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASIWQMN*GAYPSA
Trigger: AGCTGAAGGGTACGCTCCTCAGTTCATTTGCCATAT...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCACTGCAGTGGGCGCTGTaGGTCGGGCTCGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSLQWAL*VGLGRP
Trigger: CGGCCTGCCGAGCCCGACGCACAGCGCCCACTGCAG...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS-3UTR GCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAATGGAGGCAGGGGACTTaGTACGCCTGGACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQWRQGT*YAWTVL
Trigger: CAGGACCGTCCAGGCGTAGCAAGTCCCCTGCCTCCA...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGTCGGGAGGAGCTGGCTaGGCCTTGTACCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLSGGAG*ALYRLL
Trigger: GAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGA...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGCCTCCAGTCCCCTTGTaGCCCAGCTCTCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKPPVPL*PSSPMC
Trigger: ACACATAGGAGAGCTGGGGCACAAGGGGACTGGAGG...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCCAGGCCTGGAGACACTaGACTAGGGAGATAGATTTG +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGQAWRH*TREIDL
Trigger: CAAATCTATCTCCCTAGTGCAGTGTCTCCAGGCCTG...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGGATGGGCCTGTTAACTaGCACCCATGGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKDGPVN*HPWGAG
Trigger: ACCTGCTCCCCATGGGTGGCAGTTAACAGGCCCATC...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGCAGGCTTCCTGGGCTaGTGGGTGATGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLAGFLG*WVMGLA
Trigger: CGCCAAGCCCATCACCCACCAGCCCAGGAAGCCTGC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTGCAGGCTTCCTGGGCTaGTGGGTGATGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFAGFLG*WVMGLA
Trigger: CGCCAAGCCCATCACCCACCAGCCCAGGAAGCCTGC...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCTCAAAAAGCACCTCCTaGTCATCACCACTTCCACGG +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGSKSTS*SSPLPR
Trigger: CCGTGGAAGTGGTGATGACCAGGAGGTGCTTTTTGA...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCGAAGAAACTCAGGCCTaGAGACACTGCACTAGGGAG +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSEETQA*RHCTRE
Trigger: CTCCCTAGTGCAGTGTCTCCAGGCCTGAGTTTCTTC...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCACATACACAATCCCTTTaGAGTATCGATCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSHTQSL*SIDLRF
Trigger: GAAACGGAGATCGATACTTCAAAGGGATTGTGTATG...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCTGTACTCCAGTTTCTTaGAGGGCTCTATGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSCTPVS*RALWSH
Trigger: GTGGCTCCATAGAGCCCTTCAAGAAACTGGAGTACA...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTTTTGGCAGTGGCCAGTaGAGACACTGCCCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATFGSGQ*RHCPRS
Trigger: GCTTCTCGGGCAGTGTCTTCACTGGCCACTGCCAAA...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATATTCTCTCGCACCTCTaGAGGGCTTCCTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNILSHL*RASFGS
Trigger: ACTGCCAAAGGAAGCCCTTCAGAGGTGCGAGAGAAT...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAATCCTGGGCTGGTGGGTaGTGGGCTTGGCGACTTGCC +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKSWAGG*WAWRLA
Trigger: GGCAAGTCGCCAAGCCCATCACCCACCAGCCCAGGA...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTTTTGGTGGACGCAAGTaGCGTAGAGGAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATFGGRK*RRGAAM
Trigger: CATGGCGGCTCCTCTACGTCACTTGCGTCCACCAAA...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCCCAGATGTCCACCTTaGGGCCGTATCCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATPRCPP*GRIQSL
Trigger: CAGAGACTGGATACGGCCTCAAGGTGGACATCTGGG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCGCTTGGGGCCTGTGTTaGAATGCTTCTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASAWGLC*NASLSF
Trigger: GAAAGATAAAGAAGCATTTCAACACAGGCCCCAAGC...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCACTCAAATTCTACAGTaGTGTGCTGGGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGTQILQ*CAGIPM
Trigger: CATGGGGATCCCAGCACATCACTGTAGAATTTGAGT...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCTCTTGGTGGTGCTCCTaGGGGATGATGAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGSWWCS*GMMKLF
Trigger: AAATAGCTTCATCATCCCGCAGGAGCACCACCAAGA...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGGGCCTGTGTTGAAATaGTTCTTTATCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSGPVLK*FFIFPA
Trigger: AGCTGGAAAGATAAAGAAGCATTTCAACACAGGCCC...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCATCCTCACATCCTGGTTaGGTCTTCGTCGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDASSHPG*VFVGKP
Trigger: AGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGA...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCCTCCAGTCCCCTTGTaGCCCAGCTCTCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATPPVPL*PSSPMC
Trigger: ACACATAGGAGAGCTGGGGCACAAGGGGACTGGAGG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCTGCAGGTAGGTCTCTaGCCATTGCATTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSLQVGL*PLHSSH
Trigger: GTGTGAAGAATGCAATGGGCAGAGACCTACCTGCAG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTGATGGGCCTGTTAACTaGCACCCATGGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATDGPVN*HPWGAG
Trigger: ACCTGCTCCCCATGGGTGGCAGTTAACAGGCCCATC...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAATGAAATACACACTGTaGTATGGAGGACATGTGGGA +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSMKYTL*YGGHVG
Trigger: TCCCACATGTCCTCCATAGCACAGTGTGTATTTCAT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATTTCCGGAAGCCCCAGTaGTGTCAGTACTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNFRKPQ*CQYFAL
Trigger: CAGTGCAAAGTACTGACAGCACTGGGGCTTCCGGAA...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615680.4
CDS-3UTR CCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTACGGTCCTGGGCTCTTaGTGGTGCTCCTGCGGGATG +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFTVLGS*WCSCGM
Trigger: CATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGT...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGCAGGCTTCCTGGGCTaGTGGGTGATGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAAGFLG*WVMGLA
Trigger: CGCCAAGCCCATCACCCACCAGCCCAGGAAGCCTGC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAGATTTGCTGCCATCTTaGTGCTCATACACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDADLLPS*CSYTSR
Trigger: CCTGCTGGTGTATGAGCACCAAGATGGCAGCAAATC...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGGGCCGTCTACAATGGTaGCCAGTCCAAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKGRLQW*PVQSHP
Trigger: TGGGTGACTTTGGACTGGCCACCATTGTAGACGGCC...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCTCAAAAAGCACCTCCTaGTCATCACCACTTCCACGG +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSSKSTS*SSPLPR
Trigger: CCGTGGAAGTGGTGATGACCAGGAGGTGCTTTTTGA...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCACCAATTCCCTCCACTTaGGATGCAGAACTCACTGCA +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAPIPST*DAELTA
Trigger: TGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGG...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATCACCAACACTCTTTCTaGTGTTCTGTGCCCCCTACC +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNHQHSF*CSVPPT
Trigger: GGTAGGGGGCACAGAACACCAGAAAGAGTGTTGGTG...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 72 bp TCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTaGGGAATACATTTGAGTTGGGCACCTGCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SGCLVDPRAQQT*GIHLSWAPASK
Trigger: CTTAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATTGTTCAGCAGAATCCTaGCAGCTTTCCGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNCSAES*QLSVAS
Trigger: TGAAGCCACGGAAAGCTGTCAGGATTCTGCTGAACA...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGCTTGGCGACTTGCCTaGGCGCGGAGTAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKAWRLA*ARSREL
Trigger: CAGCTCTCTACTCCGCGCTCAGGCAAGTCGCCAAGC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACCCAGATGTCCACCTTaGGGCCGTATCCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQPRCPP*GRIQSL
Trigger: CAGAGACTGGATACGGCCTCAAGGTGGACATCTGGG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCATTCCCTCTTTCTGTTTaGAATTCCAGCCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAFPLSV*NSSPAE
Trigger: CTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAA...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAGGCCCTGCATTCTTCTaGGCTGCCCTTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQGPAFF*AALLQC
Trigger: ACACTGCAGAAGGGCAGCTCAGAAGAATGCAGGGCC...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCCTGCAGTGGGCGCTGTaGGTCGGGCTCGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFLQWAL*VGLGRP
Trigger: CGGCCTGCCGAGCCCGACGCACAGCGCCCACTGCAG...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR GCA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTACTGCAGTGGGCGCTGTaGGTCGGGCTCGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLLQWAL*VGLGRP
Trigger: CGGCCTGCCGAGCCCGACGCACAGCGCCCACTGCAG...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR GCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACTGGGCTCTTGGTGGTaGTCCTGCGGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQLGSWW*SCGMMK
Trigger: CTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR GCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGATGGAGGCAGGGGACTTaGTACGCCTGGACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGWRQGT*YAWTVL
Trigger: CAGGACCGTCCAGGCGTAGCAAGTCCCCTGCCTCCA...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGGTAATGAGCTCCTTTaGAGAATCGGAAACATTATC +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSGNELL*RIGNII
Trigger: GATAATGTTTCCGATTCTGCAAAGGAGCTCATTACC...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTAAACTCCAGCTGCTGTaGTATTCGGCTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATKLQLL*YSAWGL
Trigger: CAGGCCCCAAGCCGAATAGCACAGCAGCTGGAGTTT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGGACAGAAACTCCAGCTaGTGTGCTATTCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLDRNSS*CAIRLG
Trigger: CCCAAGCCGAATAGCACAGCAGCTGGAGTTTCTGTC...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCTCTTACCCTCTAAACTaGATGCAAAGTAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASSYPLN*MQSKGL
Trigger: CAGACCCTTACTTTGCATGCAGTTTAGAGGGTAAGA...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGGCGGCAGCAGCTGCTaGAGCGCGGCGCCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLGGSSC*SAAPRL
Trigger: CAACCGAGGCGCCGCGCTCCAGCAGCTGCTGCCGCC...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGTCCTGGGCTCTTGGTaGTGCTCCTGCGGGATGATG +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLVLGSW*CSCGMM
Trigger: CATCATCCCGCAGGAGCACCACCAAGAGCCCAGGAC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGGGACTTGCTACGCCTaGACGGTCCTGGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKGTCYA*TVLGSW
Trigger: CCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAATAGACACTTCATTCTaGATCATGTGCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSIDTSF*IMCSLP
Trigger: AGGCAAAGAGCACATGATCCAGAATGAAGTGTCTAT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATTGTACAGCATCCCACTaGCGTCTCTCTCGGTGTATT +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNCTASH*RLSRCI
Trigger: AATACACCGAGAGAGACGCCAGTGGGATGCTGTACA...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGAGTTCGGGAGGAGCTaGCTGCGCCTTGTACCGGCT +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKEFGRS*LRLVPA
Trigger: AGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGAGTCTCGGAGGAGCTTaGGGAGTAGTCTTCCGATTC +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKSLGGA*GVVFRF
Trigger: GAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATCCAATTCCCTCCACTTaGGATGCAGAACTCACTGCA +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNPIPST*DAELTA
Trigger: TGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGG...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGGAAGAAACTCAGGCCTaGAGACACTGCACTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLEETQA*RHCTRE
Trigger: CTCCCTAGTGCAGTGTCTCCAGGCCTGAGTTTCTTC...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCATCTAGTGGACGCCCTTaGCCAGTAAACAACCATGAT +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDASSGRP*PVNNHD
Trigger: ATCATGGTTGTTTACTGGCCAAGGGCGTCCACTAGA...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATGGCTGGAAATCTTCTTaGGCCCATCAATGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNGWKSS*AHQWCR
Trigger: TCTACACCATTGATGGGCTCAAGAAGATTTCCAGCC...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTTTTGGCAGTGGCCAGTaGAGACACTGCCCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFFGSGQ*RHCPRS
Trigger: GCTTCTCGGGCAGTGTCTTCACTGGCCACTGCCAAA...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACGCGGAGTAGAGAGCTaGCTACCAGGGGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQRGVES*LPGVPL
Trigger: TAATGGAACCCCTGGTAGTCAGCTCTCTACTCCGCG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGCCAGCTACTGACAGCTaGTGTTCATTTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLPATDS*CSFSGR
Trigger: CCTCCCAGAAAATGAACATCAGCTGTCAGTAGCTGG...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCTATCTTTCCAGCTACTaGCAGCTGATGTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASYLSSY*QLMFIF
Trigger: GAAAATGAACATCAGCTGTCAGTAGCTGGAAAGATA...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCGCGTGGAAAAGCAGGTaGGAAAAATCACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSAWKSR*EKSQDL
Trigger: AAGATCCTGTGATTTTTCTCACCTGCTTTTCCACGC...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTGGCCCTGCATTCTTCTaGGCTGCCCTTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFGPAFF*AALLQC
Trigger: ACACTGCAGAAGGGCAGCTCAGAAGAATGCAGGGCC...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCACTAAAGATTCCTTCTaGCGTCCTAGGAACCCCATT +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSTKDSF*RPRNPI
Trigger: AATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGT...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGTCTCATCCATCGAGCTaGAGACTTTGGTGGACGCAA +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKSHPSS*RLWWTQ
Trigger: TTGCGTCCACCAAAGTCTGCAGCTCGATGGATGAGA...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCGGTAATGAGCTCCTTTaGAGAATCGGAAACATTATC +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASGNELL*RIGNII
Trigger: GATAATGTTTCCGATTCTGCAAAGGAGCTCATTACC...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGAAACCCGTGGTCCAGTaGTATGACAGAAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLKPVVQ*YDRNSS
Trigger: GCTGGAGTTTCTGTCATAGCACTGGACCACGGGTTT...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTCGGGAGGAGCTGGCTaGGCCTTGTACCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLESGGAG*ALYRLL
Trigger: GAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCTGTTCAGCCACCAGATaGAAATTTCATGAGATATCC +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASCSATR*KFHEIS
Trigger: GGATATCTCATGAAATTTGCATCTGGTGGCTGAACA...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTGGCGGCAGCAGCTGCTaGAGCGCGGCGCCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSGGSSC*SAAPRL
Trigger: CAACCGAGGCGCCGCGCTCCAGCAGCTGCTGCCGCC...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATGGCGGCAGCAGCTGCTaGAGCGCGGCGCCTCGGTTG +
Preference number: 4 (lower is better)
Translates to: IHQRLMSMASEKLSLENYGGSSC*SAAPRL
Trigger: CAACCGAGGCGCCGCGCTCCAGCAGCTGCTGCCGCC...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS-3UTR CCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAATTGTTCTCACTCCCTaGGGCAAATTCACGTTATCC +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAIVLTP*GKFTLS
Trigger: GGATAACGTGAATTTGCCCCAGGGAGTGAGAACAAT...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGTCCTGGGCTCTTGGTaGTGCTCCTGCGGGATGATG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKVLGSW*CSCGMM
Trigger: CATCATCCCGCAGGAGCACCACCAAGAGCCCAGGAC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGGCAGGCTTCCTGGGCTaGTGGGTGATGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEAGFLG*WVMGLA
Trigger: CGCCAAGCCCATCACCCACCAGCCCAGGAAGCCTGC...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCATCAGAAGAACGATATTaGGATGCTTCACTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSSEERY*DASLFL
Trigger: TAAGAAGAGTGAAGCATCCCAATATCGTTCTTCTGA...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGTGTACAGCATCCCACTaGCGTCTCTCTCGGTGTATT +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLCTASH*RLSRCI
Trigger: AATACACCGAGAGAGACGCCAGTGGGATGCTGTACA...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGGGCTTGATATCACGGTaGACGATGTTCAGGCTATGC +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLGLISR*TMFRLC
Trigger: GCATAGCCTGAACATCGTCCACCGTGATATCAAGCC...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGTCAAAAAGCACCTCCTaGTCATCACCACTTCCACGG +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKSKSTS*SSPLPR
Trigger: CCGTGGAAGTGGTGATGACCAGGAGGTGCTTTTTGA...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGCCAATTCCCTCCACTTaGGATGCAGAACTCACTGCA +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLPIPST*DAELTA
Trigger: TGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGG...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATCATGTGGAGACAATTTaGGGGGCACCATCTATTTCC +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNHVETI*GAPSIS
Trigger: GGAAATAGATGGTGCCCCCCAAATTGTCTCCACATG...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGAAATGGGAATCGGTTaGATGAGTTTAAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGEMGIG*MSLRMA
Trigger: AGCCATCCTTAAACTCATCCAACCGATTCCCATTTC...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACTCTGCCGAAGGACATaGTGGACTTCAAGTAGGACC +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQLCRRT*WTSSRT
Trigger: GGTCCTACTTGAAGTCCATCATGTCCTTCGGCAGAG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCATACACAATCCCTTTaGAGTATCGATCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSHTQSL*SIDLRF
Trigger: GAAACGGAGATCGATACTTCAAAGGGATTGTGTATG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGGGCTGGAAATCTTCTTaGGCCCATCAATGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKGWKSS*AHQWCR
Trigger: TCTACACCATTGATGGGCTCAAGAAGATTTCCAGCC...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCCAGCTTGGGCCGAATaGAATCCTTATTCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATPAWAE*NPYSLA
Trigger: TGCGAGAGAATAAGGATTTCATTCGGCCCAAGCTGG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp CTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTTGTACTCAAGCTTGGCGACTTGCCTaGGCGCGGAGTAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQKFWLYIATWLVCSCTQAWRLA*ARSREL
Trigger: CAGCTCTCTACTCCGCGCTCAGGCAAGTCGCCAAGC...TTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAGCTTGGCGACTTGCCTaGGCGCGGAGTAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSAWRLA*ARSREL
Trigger: CAGCTCTCTACTCCGCGCTCAGGCAAGTCGCCAAGC...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTTCCTGGGCTGGTGGGTaGTGGGCTTGGCGACTTGCC +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLSWAGG*WAWRLA
Trigger: GGCAAGTCGCCAAGCCCATCACCCACCAGCCCAGGA...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAATTTGGTGGACGCAAGTaGCGTAGAGGAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKFGGRK*RRGAAM
Trigger: CATGGCGGCTCCTCTACGTCACTTGCGTCCACCAAA...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAGGCTATGCAGGTATTTaGTGGCGCTGGCTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQGYAGI*WRWLGC
Trigger: ACAACCTAGCCAGCGCCATCAAATACCTGCATAGCC...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGACAGCAGAAAATCGCTaGTCTACATCGACCAACAGC +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLTAENR*STSTNS
Trigger: GCTGTTGGTCGATGTAGATCAGCGATTTTCTGCTGT...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCGTGGTCCAGTGCTATaGCAGAAACTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLRGPVL*QKLQLL
Trigger: CAGCAGCTGGAGTTTCTGTCATAGCACTGGACCACG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGGTAGTCCAAAGACCCTaGTCTCTTGATGGTAAACCC +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKVVQRP*SLDGKP
Trigger: GGGTTTACCATCAAGAGATCAGGGTCTTTGGACTAC...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACTGGGATCCCCATGCTaGATGGGCCCTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKLGSPC*MGPAFF
Trigger: GAAGAATGCAGGGCCCATTCAGCATGGGGATCCCAG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGTCGGCCCGTCCTCATTaGAATGCGGCGCTTCGCACA +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMSARPH*NAALRT
Trigger: TGTGCGAAGCGCCGCATTTCAATGAGGACGGGCCGA...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS-3UTR TCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCTCCCTCAGCACGATTaGGCTTCAGCGCAAGGGATA +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGLPQHD*ASAQGI
Trigger: TATCCCTTGCGCTGAAGCTCAATCGTGCTGAGGGAG...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCTCCCGCTCGTCGAAGTaGTCCAGCTCCATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLASRSSK*SSSMSL
Trigger: CAGAGACATGGAGCTGGAGCACTTCGACGAGCGGGA...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR GCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAGGATCATGTGCTCTTTaGCTCGACATTTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAGSCAL*LDICFS
Trigger: AGAAAAGCAAATGTCGAGGCAAAGAGCACATGATCC...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCTTCGTCGGAAAACCTaGCTCTCCTTATCAAGAGCG +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATLRRKT*LSLSRA
Trigger: CGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCACACCGGGCAATTTATTaGTCTTTTCCACCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAHRAIY*SFPPVV
Trigger: AACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTG...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATATTGTGTTCCCAGTGTaGTTTCTCCTCAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNIVFPV*FLLSHL
Trigger: AAGATGGCTGAGGAGAAAGCACACTGGGAACACAAT...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGCTCAGTACACTAGATaGTGTAGCAATATAGTTAAT +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSAQYTR*CSNIVN
Trigger: ATTAACTATATTGCTACAGCATCTAGTGTACTGAGC...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATAATTCTACAGTGATGTaGTGGGATCCCCATGCTGAA +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNNSTVM*WDPHAE
Trigger: TTCAGCATGGGGATCCCAGCACATCACTGTAGAATT...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGAGTCAGCATGCCTTGTaGTTGTCTGTTAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLSQHAL*LSVNPL
Trigger: CAGAGGGTTAACAGACAAGCACAAGGCATGCTGACT...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCTAGAGCCAGGCCCTGTAGGCTTCCTTTGGCAGTaGCCAGTGAAGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: LVLNIGSVYEIHLEPGPVGFLWQ*PVKTLP
Trigger: GGGCAGTGTCTTCACTGGCCACTGCCAAAGGAAGCC...TACAGGGCCTGGCTCTAGATGAATTTCATACACGGACCCAATATTGAGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp CTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTTGTACTCAAACGGTCCTGGGCTCTTaGTGGTGCTCCTGCGGGATG +
Preference number: 4 (lower is better)
Translates to: LQKFWLYIATWLVCSCTQTVLGS*WCSCGM
Trigger: CATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGT...TTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp AATATTGGGTCCGTGTATGAAATTCATCTAGAGCCAGGCCCTGTACAAAAATCTGGGACTTGCTACGCCTaGACGGTCCTGGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NIGSVYEIHLEPGPVQKSGTCYA*TVLGSW
Trigger: CCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCC...AGATTTTTGTACAGGGCCTGGCTCTAGATGAATTTCATACACGGACCCAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp GCTGTAAGACTTTTGCTTCAGAAATGTGAAACCTTCACCCAATCACAAACCATAGCAGGCTTCCTGGGCTaGTGGGTGATGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AVRLLLQKCETFTQSQTIAGFLG*WVMGLA
Trigger: CGCCAAGCCCATCACCCACCAGCCCAGGAAGCCTGC...TATGGTTTGTGATTGGGTGAAGGTTTCACATTTCTGAAGCAAAAGTCTTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGGCCGTCTACAATGGTaGCCAGTCCAAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLGRLQW*PVQSHP
Trigger: TGGGTGACTTTGGACTGGCCACCATTGTAGACGGCC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCACTTCCACGGAATaGAGGGAAACCACACAGCAG +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQTTSTE*RETTQQ
Trigger: CTGCTGTGTGGTTTCCCTCCATTCCGTGGAAGTGGT...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATGGAATACATTTGAGTTaGGCACCTGCCTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNGIHLS*APASKT
Trigger: TGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCC...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCATGTTCCTCATTAATATaGAATCTACCTACACACCAA +
Preference number: 4 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSCSSLI*NLPTHQ
Trigger: TTGGTGTGTAGGTAGATTCCATATTAATGAGGAACA...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCTCTCATTTGTCTGTATaGGCAAGATATGGTAAACCT +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASSHLSV*ARYGKP
Trigger: AGGTTTACCATATCTTGCCCATACAGACAAATGAGA...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCTCCTGGGCTGGTGGGTaGTGGGCTTGGCGACTTGCC +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFSWAGG*WAWRLA
Trigger: GGCAAGTCGCCAAGCCCATCACCCACCAGCCCAGGA...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTATCCTGGGCTGGTGGGTaGTGGGCTTGGCGACTTGCC +
Preference number: 4 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLSWAGG*WAWRLA
Trigger: GGCAAGTCGCCAAGCCCATCACCCACCAGCCCAGGA...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGTTTGGTGGACGCAAGTaGCGTAGAGGAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMFGGRK*RRGAAM
Trigger: CATGGCGGCTCCTCTACGTCACTTGCGTCCACCAAA...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTACAGCAGAAAATCGCTaGTCTACATCGACCAACAGC +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATTAENR*STSTNS
Trigger: GCTGTTGGTCGATGTAGATCAGCGATTTTCTGCTGT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACCAGCTACTGACAGCTaGTGTTCATTTTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQPATDS*CSFSGR
Trigger: CCTCCCAGAAAATGAACATCAGCTGTCAGTAGCTGG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGACGTGGTCCAGTGCTATaGCAGAAACTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGRGPVL*QKLQLL
Trigger: CAGCAGCTGGAGTTTCTGTCATAGCACTGGACCACG...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615680.4
CDS-3UTR TCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCTGCAGATCCTAGCTTaGCTGATGAAAACATTCATT +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSLQILA*LMKTFI
Trigger: AATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCGGCGCTAGCAGCAGCTaGTATGGAAGCAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGGASSS*YGSSIS
Trigger: AGAAATGCTGCTTCCATATCAGCTGCTGCTAGCGCC...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTTTCCCTCTTTCTGTTTaGAATTCCAGCCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATFPLSV*NSSPAE
Trigger: CTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAA...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGAGCGGTGGTTGCTATaGCAGAAACTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKERWLL*QKLQLL
Trigger: CAGCAGCTGGAGTTTCTGTCATAGCAACCACCGCTC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000379893.5
CDS-3UTR TCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGAGCGGTGGTTGCTATaGCAGAAACTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAERWLL*QKLQLL
Trigger: CAGCAGCTGGAGTTTCTGTCATAGCAACCACCGCTC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000379893.5
CDS-3UTR TCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGAAAAATCTGAGTTTTaGACTGACCAACTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGEKSEF*TDQLQV
Trigger: GACTTGAAGTTGGTCAGTTCAAAACTCAGATTTTTC...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCTTTTCTTACTACATTTaGTTGGACTGGAGTGAACTG +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGFSYYI*LDWSEL
Trigger: CAGTTCACTCCAGTCCAATCAAATGTAGTAAGAAAA...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp CACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCTGGAGGCAGGGGACTTaGTACGCCTGGACGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HMVSVFLYSILGPCMKFIWRQGT*YAWTVL
Trigger: CAGGACCGTCCAGGCGTAGCAAGTCCCCTGCCTCCA...GATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR GCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAATTGCTGCCATCTTGGTaGTCATACACCAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQLLPSW*SYTSRF
Trigger: GAACCTGCTGGTGTATGAGCACCAAGATGGCAGCAA...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAATCCTCACATCCTGGTTaGGTCTTCGTCGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQSSHPG*VFVGKP
Trigger: AGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGA...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCAAGAAGAAAGAACCGTaGGTGTGTCGAAGTTATAAA +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGKKKEP*VCRSYK
Trigger: TTTATAACTTCGACACACGCACGGTTCTTTCTTCTT...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATCACCGGGCAATTTATTaGTCTTTTCCACCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNHRAIY*SFPPVV
Trigger: AACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTG...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAAAAAGGCCTGAGCCATaGACCGCAGGCTCAGTACAC +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKKRPEP*TAGSVH
Trigger: GTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
49% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGTCTGAGCTGCCCTTCTaGAGTGTGCTGAGAAACACC +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLSELPF*SVLRNT
Trigger: GGTGTTTCTCAGCACACTGCAGAAGGGCAGCTCAGA...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGATGCTGAATGGGCCCTaGATTCTTCTGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLMLNGP*ILLSCP
Trigger: AGGGCAGCTCAGAAGAATGCAGGGCCCATTCAGCAT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCAACCATGATTTAATGTaGTTGAGACTTGGTCATATG +
Preference number: 4 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASNHDLM*LRLGHM
Trigger: CATATGACCAAGTCTCAAGCACATTAAATCATGGTT...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATATGAAATACACACTGTaGTATGGAGGACATGTGGGA +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNMKYTL*YGGHVG
Trigger: TCCCACATGTCCTCCATAGCACAGTGTGTATTTCAT...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp CACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCCGGTACAGGTCCCTCTaGTTCCGCAGGCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HMVSVFLYSILGPCMKFIRYRSL*FRRLPG
Trigger: CCCAGGAAGCCTGCGGAAGCAGAGGGACCTGTACCG...GATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCCTGACAGCTTTCCGTaGCTTCACGCCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLPDSFP*LHATSD
Trigger: ATCAGAAGTGGCGTGAAGCCACGGAAAGCTGTCAGG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp CTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTTGTACTCAAGTCCTGGGCTCTTGGTaGTGCTCCTGCGGGATGATG +
Preference number: 4 (lower is better)
Translates to: LQKFWLYIATWLVCSCTQVLGSW*CSCGMM
Trigger: CATCATCCCGCAGGAGCACCACCAAGAGCCCAGGAC...TTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp CACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCACGCCTGGACGGTCCTaGGCTCTTGGTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HMVSVFLYSILGPCMKFITPGRS*ALGGAP
Trigger: AGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGT...GATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATAACATTATCCCAGTATaGAGAAGGAAAGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNNIIPV*RRKVHL
Trigger: CAGGTGGACTTTCCTTCTCCATACTGGGATAATGTT...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACGGCTCCTCACATCCTaGTTGCGTCTTCGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKRLLTS*LRLRRK
Trigger: TTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCCGGCTCCTCACATCCTaGTTGCGTCTTCGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLARLLTS*LRLRRK
Trigger: TTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCG...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAATTGTTAGAACATTCTaGATTGTGTTCCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAIVRTF*IVFPVC
Trigger: GCACACTGGGAACACAATCCAGAATGTTCTAACAAT...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCACCAACACTCTTTCTaGTGTTCTGTGCCCCCTACC +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLHQHSF*CSVPPT
Trigger: GGTAGGGGGCACAGAACACCAGAAAGAGTGTTGGTG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCGATCCCCATGCTGAATaGGCCCTGCATTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGDPHAE*ALHSSE
Trigger: CTCAGAAGAATGCAGGGCCCATTCAGCATGGGGATC...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAATCTACAGTGATGTGCTaGGATCCCCATGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQSTVMC*DPHAEW
Trigger: CCATTCAGCATGGGGATCCCAGCACATCACTGTAGA...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCAAAAGCAAAGCAATCTaGATACACCAATGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGKSKAI*IHQCSQ
Trigger: CTGACTACATTGGTGTATCCAGATTGCTTTGCTTTT...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGATACACACTGTGCTATaGAGGACATGTGGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLIHTVL*RTCGKA
Trigger: AGCTTTCCCACATGTCCTCCATAGCACAGTGTGTAT...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAAAGCCGAGGTGGTCTTaGCGTTCACCGACCAGTTGG +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEKPRWS*RSPTSW
Trigger: CCAACTGGTCGGTGAACGTCAAGACCACCTCGGCTT...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp AATATTGGGTCCGTGTATGAAATTCATCTAGAGCCAGGCCCTGTACAAAAATCTTTTGGCAGTGGCCAGTaGAGACACTGCCCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: NIGSVYEIHLEPGPVQKSFGSGQ*RHCPRS
Trigger: GCTTCTCGGGCAGTGTCTTCACTGGCCACTGCCAAA...AGATTTTTGTACAGGGCCTGGCTCTAGATGAATTTCATACACGGACCCAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGAGGGGTTCCATTAACTaGGCTGGTGGAGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLERGSIN*AGGGRG
Trigger: TCCCCTGCCTCCACCAGCTCAGTTAATGGAACCCCT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGAGGGGTTCCATTAACTaGGCTGGTGGAGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: KKTPSAEILALYCHMVSVRGSIN*AGGGRG
Trigger: TCCCCTGCCTCCACCAGCTCAGTTAATGGAACCCCT...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACAGCAGAAAATCGCTaGTCTACATCGACCAACAGC +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQTAENR*STSTNS
Trigger: GCTGTTGGTCGATGTAGATCAGCGATTTTCTGCTGT...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTGCTTGGGGCCTGTGTTaGAATGCTTCTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATAWGLC*NASLSF
Trigger: GAAAGATAAAGAAGCATTTCAACACAGGCCCCAAGC...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCTTCCGATTCCGAGTTaGGTTCGGGAGGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLELPIPS*VREELA
Trigger: AGCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGGCGCTAGCAGCAGCTaGTATGGAAGCAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKGASSS*YGSSIS
Trigger: AGAAATGCTGCTTCCATATCAGCTGCTGCTAGCGCC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCTGGGATCCCCATGCTaGATGGGCCCTGCATTCTTC +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLELGSPC*MGPAFF
Trigger: GAAGAATGCAGGGCCCATTCAGCATGGGGATCCCAG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCATATGGGAGCTCTGTaGCCCTCTAAGCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATHMGAL*PSKPNF
Trigger: AAAATTTGGCTTAGAGGGTCACAGAGCTCCCATATG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATTGGACTGGAGTGAACTaGCATTATAGCATCTTTATC +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNWTGVN*HYSIFI
Trigger: GATAAAGATGCTATAATGTCAGTTCACTCCAGTCCA...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGTTAACCTATGCCATCTaGTCCATGCAGCAAGTGATA +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLLTYAI*SMQQVI
Trigger: TATCACTTGCTGCATGGATCAGATGGCATAGGTTAA...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGCTCCCAGAGCAGGCTaGATGAGATGCAGGATTCAT +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKAPRAG*MRCRIH
Trigger: ATGAATCCTGCATCTCATTCAGCCTGCTCTGGGAGC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615680.4
CDS-3UTR GCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAATCCCGCTCGTCGAAGTaGTCCAGCTCCATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMESRSSK*SSSMSL
Trigger: CAGAGACATGGAGCTGGAGCACTTCGACGAGCGGGA...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR GCA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGCTGGGCTCTTGGTGGTaGTCCTGCGGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: KKTPSAEILALYCHMVSVLGSWW*SCGMMK
Trigger: CTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAG...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR GCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACCAGCTTCAGTGATTTaGTGCCATCTTGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQPASVI*CHLGAH
Trigger: ATGAGCACCAAGATGGCAGCAAATCACTGAAGCTGG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGACAGAAACTCCAGCTaGTGTGCTATTCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLADRNSS*CAIRLG
Trigger: CCCAAGCCGAATAGCACAGCAGCTGGAGTTTCTGTC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGACAGAAACTCCAGCTaGTGTGCTATTCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKDRNSS*CAIRLG
Trigger: CCCAAGCCGAATAGCACAGCAGCTGGAGTTTCTGTC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCTTCGTCGGAAAACCTaGCTCTCCTTATCAAGAGCG +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGLRRKT*LSLSRA
Trigger: CGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAG...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCTCCTCACATCCTGGTTaGGTCTTCGTCGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGSSHPG*VFVGKP
Trigger: AGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGA...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCCTCAATAAAATTCTATaGACTCAGAGGGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGLNKIL*TQRVNK
Trigger: CTTGTTAACCCTCTGAGTGCATAGAATTTTATTGAG...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCAACACCCCTTGATCTaGAGTAAAATCAAGAAACAT +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSQHPLI*SKIKKH
Trigger: ATGTTTCTTGATTTTACTGCAGATCAAGGGGTGTTG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAACCTCCAGTCCCCTTGTaGCCCAGCTCTCCTATGTGT +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEPPVPL*PSSPMC
Trigger: ACACATAGGAGAGCTGGGGCACAAGGGGACTGGAGG...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCAGGCCTGGAGACACTaGACTAGGGAGATAGATTTG +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGQAWRH*TREIDL
Trigger: CAAATCTATCTCCCTAGTGCAGTGTCTCCAGGCCTG...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGACTAGTGCAGGGATGTaGCTCGGCCCGTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLETSAGM*LGPSSL
Trigger: CAATGAGGACGGGCCGAGGCACATCCCTGCACTAGT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS-3UTR GCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTAGAAACTTGTTTAAATaGGCCAAGTCCCTACGCACC +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATRNLFK*AKSLRT
Trigger: GGTGCGTAGGGACTTGGCGCATTTAAACAAGTTTCT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGAGATCGGAACCGGTCTaGGGAGATGGCATACACAAT +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLRSEPV*GDGIHN
Trigger: ATTGTGTATGCCATCTCCCCAGACCGGTTCCGATCT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAGGCTTCCTTTGGCAGTaGCCAGTGAAGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSGFLWQ*PVKTLP
Trigger: GGGCAGTGTCTTCACTGGCCACTGCCAAAGGAAGCC...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS-3UTR CCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCTTTTGGTGTAAGAAGTaGACTTTACCACTCGACATT +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSFWCKK*TLPLDI
Trigger: AATGTCGAGTGGTAAAGTCCACTTCTTACACCAAAA...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGGCTTCCTGGGCTGGTaGGTGATGGGCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLGFLGW*VMGLAT
Trigger: AGTCGCCAAGCCCATCACCCACCAGCCCAGGAAGCC...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTGATTTGCTGCCATCTTaGTGCTCATACACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFDLLPS*CSYTSR
Trigger: CCTGCTGGTGTATGAGCACCAAGATGGCAGCAAATC...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGGGGGGCCGTCTACAATaGTGGCCAGTCCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEGGRLQ*WPVQSH
Trigger: GTGACTTTGGACTGGCCACCATTGTAGACGGCCCCC...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGCGGCTCCTCACATCCTaGTTGCGTCTTCGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMRLLTS*LRLRRK
Trigger: TTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCG...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCGAGTTCGGGAGGAGCTaGCTGCGCCTTGTACCGGCT +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFEFGRS*LRLVPA
Trigger: AGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTC...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAAGTCTCGGAGGAGCTTaGGGAGTAGTCTTCCGATTC +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKSLGGA*GVVFRF
Trigger: GAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTCCAATTCCCTCCACTTaGGATGCAGAACTCACTGCA +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFPIPST*DAELTA
Trigger: TGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGG...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGAAGAAACTCAGGCCTaGAGACACTGCACTAGGGAG +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAEETQA*RHCTRE
Trigger: CTCCCTAGTGCAGTGTCTCCAGGCCTGAGTTTCTTC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCTCTCTGGTTGTCTCGTaGATCCCAGAGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLASLVVS*IPEPSK
Trigger: TTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGA...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGATCCCCATGCTGAATaGGCCCTGCATTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLADPHAE*ALHSSE
Trigger: CTCAGAAGAATGCAGGGCCCATTCAGCATGGGGATC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCAGATTTCTACTTGACTaGTCACATTCCACTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGRFLLD*SHSTVY
Trigger: ATAAACAGTGGAATGTGACCAGTCAAGTAGAAATCT...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCTCTCATTTGTCTGTATaGGCAAGATATGGTAAACCT +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSSHLSV*ARYGKP
Trigger: AGGTTTACCATATCTTGCCCATACAGACAAATGAGA...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACCAGCTTGGGCCGAATaGAATCCTTATTCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKPAWAE*NPYSLA
Trigger: TGCGAGAGAATAAGGATTTCATTCGGCCCAAGCTGG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCGCGGAGTAGAGAGCTaGCTACCAGGGGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLERGVES*LPGVPL
Trigger: TAATGGAACCCCTGGTAGTCAGCTCTCTACTCCGCG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGACAGCAGGATATAAGTaGTTACACCTGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLTAGYK*LHLLPR
Trigger: TCTGGGCAGCAGGTGTAATCACTTATATCCTGCTGT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGTATCTTTCCAGCTACTaGCAGCTGATGTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKYLSSY*QLMFIF
Trigger: GAAAATGAACATCAGCTGTCAGTAGCTGGAAAGATA...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGTAGTCCAAAGACCCTaGTCTCTTGATGGTAAACCC +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLVVQRP*SLDGKP
Trigger: GGGTTTACCATCAAGAGATCAGGGTCTTTGGACTAC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGTTCCCTCTTTCTGTTTaGAATTCCAGCCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLFPLSV*NSSPAE
Trigger: CTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAA...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACCTTGGGAATACATTTaGGTTGGGCACCTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKPWEYI*VGHLPL
Trigger: TAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGACCTTGGGAATACATTTaGGTTGGGCACCTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGPWEYI*VGHLPL
Trigger: TAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGG...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCAGATGCAAATTTCATaGGATATCCCTCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATQMQIS*DIPLWL
Trigger: CAACCAGAGAGGGATATCTCATGAAATTTGCATCTG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATCGATGGGAAAAGGCCTaGGCCATGCACCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: IHQRLMSMASEKLSLENYRWEKA*AMHRRL
Trigger: GAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCG...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGACTCAAATTCTACAGTaGTGTGCTGGGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLTQILQ*CAGIPM
Trigger: CATGGGGATCCCAGCACATCACTGTAGAATTTGAGT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCTCAAGATTTCTACTTaGCTGGTCACATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATLKIST*LVTFHC
Trigger: ACAGTGGAATGTGACCAGTCAAGTAGAAATCTTGAG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACATATGGGAGCTCTGTaGCCCTCTAAGCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQHMGAL*PSKPNF
Trigger: AAAATTTGGCTTAGAGGGTCACAGAGCTCCCATATG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCACTCCCTCAGCACGATTaGGCTTCAGCGCAAGGGATA +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSLPQHD*ASAQGI
Trigger: TATCCCTTGCGCTGAAGCTCAATCGTGCTGAGGGAG...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTTGGGCTATTCCTTCGTaGACTGAATGTGTCAATTGT +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATWAIPS*TECVNC
Trigger: ACAATTGACACATTCAGTTCACGAAGGAATAGCCCA...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp CACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCTCCCGCTCGTCGAAGTaGTCCAGCTCCATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: HMVSVFLYSILGPCMKFISRSSK*SSSMSL
Trigger: CAGAGACATGGAGCTGGAGCACTTCGACGAGCGGGA...GATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR GCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCTCTCATCCATCGAGCTaGAGACTTTGGTGGACGCAA +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLASHPSS*RLWWTQ
Trigger: TTGCGTCCACCAAAGTCTGCAGCTCGATGGATGAGA...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTACGATGTTCAGGCTATaGAGGTATTTGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFTMFRL*RYLMAL
Trigger: CAGCGCCATCAAATACCTGCATAGCCTGAACATCGT...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGATTGCTGCCATCTTGGTaGTCATACACCAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGLLPSW*SYTSRF
Trigger: GAACCTGCTGGTGTATGAGCACCAAGATGGCAGCAA...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTGGGCCTGTGTTGAAATaGTTCTTTATCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATGPVLK*FFIFPA
Trigger: AGCTGGAAAGATAAAGAAGCATTTCAACACAGGCCC...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACTTCGTCGGAAAACCTaGCTCTCCTTATCAAGAGCG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKLRRKT*LSLSRA
Trigger: CGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCACCGGGCAATTTATTaGTCTTTTCCACCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATHRAIY*SFPPVV
Trigger: AACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGACTGCAGGTAGGTCTCTaGCCATTGCATTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGLQVGL*PLHSSH
Trigger: GTGTGAAGAATGCAATGGGCAGAGACCTACCTGCAG...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAGCTCAGTACACTAGATaGTGTAGCAATATAGTTAAT +
Preference number: 4 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAAQYTR*CSNIVN
Trigger: ATTAACTATATTGCTACAGCATCTAGTGTACTGAGC...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCGCTCAGTACACTAGATaGTGTAGCAATATAGTTAAT +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSAQYTR*CSNIVN
Trigger: ATTAACTATATTGCTACAGCATCTAGTGTACTGAGC...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAAAAAGGCCTGAGCCATaGACCGCAGGCTCAGTACAC +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEKRPEP*TAGSVH
Trigger: GTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTT...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGTCTGAGCTGCCCTTCTaGAGTGTGCTGAGAAACACC +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMSELPF*SVLRNT
Trigger: GGTGTTTCTCAGCACACTGCAGAAGGGCAGCTCAGA...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCAGTCAGCATGCCTTGTaGTTGTCTGTTAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGSQHAL*LSVNPL
Trigger: CAGAGGGTTAACAGACAAGCACAAGGCATGCTGACT...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGATCAAGAGCGGTGGTTaGTATGACAGAAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLIKSGG*YDRNSS
Trigger: GCTGGAGTTTCTGTCATAGCAACCACCGCTCTTGAT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000379893.5
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTGGGACTTGCTACGCCTaGACGGTCCTGGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSGTCYA*TVLGSW
Trigger: CCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCC...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTGGCTTCCTGGGCTGGTaGGTGATGGGCTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSGFLGW*VMGLAT
Trigger: AGTCGCCAAGCCCATCACCCACCAGCCCAGGAAGCC...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGAAGATACAGTTCAGTTaGCACATCCATCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLKIQFS*HIHLLN
Trigger: ATTGAGGAGATGGATGTGCCAACTGAACTGTATCTT...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGGCTTGATATCACGGTaGACGATGTTCAGGCTATGC +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKGLISR*TMFRLC
Trigger: GCATAGCCTGAACATCGTCCACCGTGATATCAAGCC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGATTTGCTGCCATCTTaGTGCTCATACACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLADLLPS*CSYTSR
Trigger: CCTGCTGGTGTATGAGCACCAAGATGGCAGCAAATC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTAACATTATCCCAGTATaGAGAAGGAAAGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATNIIPV*RRKVHL
Trigger: CAGGTGGACTTTCCTTCTCCATACTGGGATAATGTT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGAGTCTCGGAGGAGCTTaGGGAGTAGTCTTCCGATTC +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMSLGGA*GVVFRF
Trigger: GAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACT...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTTGGAAGCAGCATTTCTaGGGCGTCATCAGTACATCT +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFWKQHF*GVISTS
Trigger: AGATGTACTGATGACGCCCCAGAAATGCTGCTTCCA...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAGGAATACATTTGAGTTaGGCACCTGCCTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQGIHLS*APASKT
Trigger: TGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCC...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGTCTCTGGTTGTCTCGTaGATCCCAGAGCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMSLVVS*IPEPSK
Trigger: TTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGA...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGGATCCCCATGCTGAATaGGCCCTGCATTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMDPHAE*ALHSSE
Trigger: CTCAGAAGAATGCAGGGCCCATTCAGCATGGGGATC...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCTTCCTTCTAACGATCTaGAGCAAATCACATATTCAT +
Preference number: 4 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSFLLTI*SKSHIH
Trigger: ATGAATATGTGATTTGCTCCAGATCGTTAGAAGGAA...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAGTTAACTGCCACCCATaGGGAGCAGGTTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSVNCHP*GAGCRK
Trigger: CTTCCTGCAACCTGCTCCCCATGGGTGGCAGTTAAC...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAAATGTGCTTGAGACTTaGTCATATGGGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQNVLET*SYGSSV
Trigger: CACAGAGCTCCCATATGACCAAGTCTCAAGCACATT...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCATCTCCCAAGCAGCAGTaGGAGGTGCAGGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSSPKQQ*EVQVLS
Trigger: AGACAGAACCTGCACCTCCCACTGCTGCTTGGGAGA...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615680.4
3UTR CAA 72 bp ACTCAGGCCTGGAGACACTGCACTAGGGAGATAGATTaGGTAACAAGAGTGAAAATACAGGTCTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: TQAWRHCTREID*VTRVKIQVSDR
Trigger: CCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCCCTAGTGCAGTGTCTCCAGGCCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAAAGCCGAGGTGGTCTTaGCGTTCACCGACCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLKPRWS*RSPTSW
Trigger: CCAACTGGTCGGTGAACGTCAAGACCACCTCGGCTT...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp CACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCCGCGGAGTAGAGAGCTaGCTACCAGGGGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: HMVSVFLYSILGPCMKFIRGVES*LPGVPL
Trigger: TAATGGAACCCCTGGTAGTCAGCTCTCTACTCCGCG...GATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGCCTTTACTAATTCCATaGCAAGATACAGTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKPLLIP*QDTVQL
Trigger: CAACTGAACTGTATCTTGTCATGGAATTAGTAAAGG...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGGGCTATGCAGGTATTTaGTGGCGCTGGCTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEGYAGI*WRWLGC
Trigger: ACAACCTAGCCAGCGCCATCAAATACCTGCATAGCC...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAACAGCAGGATATAAGTaGTTACACCTGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKTAGYK*LHLLPR
Trigger: TCTGGGCAGCAGGTGTAATCACTTATATCCTGCTGT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGCGTGGAAAAGCAGGTaGGAAAAATCACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLAWKSR*EKSQDL
Trigger: AAGATCCTGTGATTTTTCTCACCTGCTTTTCCACGC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACTCAAGATTTCTACTTaGCTGGTCACATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQLKIST*LVTFHC
Trigger: ACAGTGGAATGTGACCAGTCAAGTAGAAATCTTGAG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAATTTAAGCCTCTCCACTaGAGTTCCTGTTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKFKPLH*SSCFPP
Trigger: TGGTGGGAAACAGGAACTTCAGTGGAGAGGCTTAAA...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTAATGTCAATGGCAAGTaGGAAATTGTCCCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATNVNGK*EIVPRE
Trigger: TTCTCTAGGGACAATTTCTCACTTGCCATTGACATT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCATATGGCAAATGAACTaGGGAGCGTACCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAIWQMN*GAYPSA
Trigger: AGCTGAAGGGTACGCTCCTCAGTTCATTTGCCATAT...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGACTCCAATATGGCAAATaGACTGAGGAGCGTACCCTT +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGLQYGK*TEERTL
Trigger: AAGGGTACGCTCCTCAGTTCATTTGCCATATTGGAG...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATCCTCGGCTGTATCTCTaGGCCTTATCCCGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: IHQRLMSMASEKLSLENYPRLYL*ALSRSS
Trigger: CGACGAGCGGGATAAGGCGCAGAGATACAGCCGAGG...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS-3UTR GCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCCTGGGCTCTTGGTGGTaGTCCTGCGGGATGATGAAG +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFLGSWW*SCGMMK
Trigger: CTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAG...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAACGATGTTCAGGCTATaGAGGTATTTGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKTMFRL*RYLMAL
Trigger: CAGCGCCATCAAATACCTGCATAGCCTGAACATCGT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTCCACGTATGTTGGGGTaGCACAGACTGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLPRMLG*HRLCTG
Trigger: CCCTGTACACAGTCTGTGGCACCCCAACATACGTGG...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTAAACTCCAGCTGCTGTaGTATTCGGCTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLKLQLL*YSAWGL
Trigger: CAGGCCCCAAGCCGAATAGCACAGCAGCTGGAGTTT...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGATTGTGTTCCCAGTGTaGTTTCTCCTCAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLIVFPV*FLLSHL
Trigger: AAGATGGCTGAGGAGAAAGCACACTGGGAACACAAT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTAAAAGGCCTGAGCCATaGACCGCAGGCTCAGTACAC +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLKRPEP*TAGSVH
Trigger: GTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTT...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTCTGAGCTGCCCTTCTaGAGTGTGCTGAGAAACACC +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLESELPF*SVLRNT
Trigger: GGTGTTTCTCAGCACACTGCAGAAGGGCAGCTCAGA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAATCTGAGCTGCCCTTCTaGAGTGTGCTGAGAAACACC +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMESELPF*SVLRNT
Trigger: GGTGTTTCTCAGCACACTGCAGAAGGGCAGCTCAGA...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAAGTCAGCATGCCTTGTaGTTGTCTGTTAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKSQHAL*LSVNPL
Trigger: CAGAGGGTTAACAGACAAGCACAAGGCATGCTGACT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAATCAAGAGCGGTGGTTaGTATGACAGAAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKIKSGG*YDRNSS
Trigger: GCTGGAGTTTCTGTCATAGCAACCACCGCTCTTGAT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000379893.5
CDS-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGATTGTTCTCACTCCCTaGGGCAAATTCACGTTATCC +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLIVLTP*GKFTLS
Trigger: GGATAACGTGAATTTGCCCCAGGGAGTGAGAACAAT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGACCACTTCCACGGAATaGAGGGAAACCACACAGCAG +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLETTSTE*RETTQQ
Trigger: CTGCTGTGTGGTTTCCCTCCATTCCGTGGAAGTGGT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAACCACTTCCACGGAATaGAGGGAAACCACACAGCAG +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSTTSTE*RETTQQ
Trigger: CTGCTGTGTGGTTTCCCTCCATTCCGTGGAAGTGGT...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATAGATTTCTACTTGACTaGTCACATTCCACTGTTTAT +
Preference number: 4 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNRFLLD*SHSTVY
Trigger: ATAAACAGTGGAATGTGACCAGTCAAGTAGAAATCT...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGAATGTGCTTGAGACTTaGTCATATGGGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLNVLET*SYGSSV
Trigger: CACAGAGCTCCCATATGACCAAGTCTCAAGCACATT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTATTTATCCAAGTCAGTaGCCCAGGCAGGAACGTAAT +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFIYPSQ*PRQERN
Trigger: ATTACGTTCCTGCCTGGGCCACTGACTTGGATAAAT...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR CAA 72 bp AGCTCTCCTATGTGTGGATTTCATACTAGATGTAGATaGCACAGTGATGACCACAGTGCGTGGAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSPMCGFHTRCR*HSDDHSAWKSR
Trigger: CCTGCTTTTCCACGCACTGTGGTCATCACTGTGCAATCTACATCTAGTATGAAATCCACACATAGGAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTGTACTCCAGTTTCTTaGAGGGCTCTATGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLECTPVS*RALWSH
Trigger: GTGGCTCCATAGAGCCCTTCAAGAAACTGGAGTACA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTGTACTCCAGTTTCTTaGAGGGCTCTATGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: KKTPSAEILALYCHMVSVCTPVS*RALWSH
Trigger: GTGGCTCCATAGAGCCCTTCAAGAAACTGGAGTACA...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp CTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTTGTACTCAATGTTCAGCAGAATCCTaGCAGCTTTCCGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LQKFWLYIATWLVCSCTQCSAES*QLSVAS
Trigger: TGAAGCCACGGAAAGCTGTCAGGATTCTGCTGAACA...TTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTTTGGTGGACGCAAGTaGCGTAGAGGAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSFGGRK*RRGAAM
Trigger: CATGGCGGCTCCTCTACGTCACTTGCGTCCACCAAA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTGGCTATGCAGGTATTTaGTGGCGCTGGCTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLGYAGI*WRWLGC
Trigger: ACAACCTAGCCAGCGCCATCAAATACCTGCATAGCC...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGCTTGGGGCCTGTGTTaGAATGCTTCTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAAWGLC*NASLSF
Trigger: GAAAGATAAAGAAGCATTTCAACACAGGCCCCAAGC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGAGCTTGGGGCCTGTGTTaGAATGCTTCTTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGAWGLC*NASLSF
Trigger: GAAAGATAAAGAAGCATTTCAACACAGGCCCCAAGC...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACTGCCATTCAAGCATTaGGCGCTAGATAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKLPFKH*ALDRSD
Trigger: ATCTGATCTATCTAGCGCTCAATGCTTGAATGGCAG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGCGTGGAAAAGCAGGTaGGAAAAATCACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKAWKSR*EKSQDL
Trigger: AAGATCCTGTGATTTTTCTCACCTGCTTTTCCACGC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTCTCAAGATTTCTACTTaGCTGGTCACATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFLKIST*LVTFHC
Trigger: ACAGTGGAATGTGACCAGTCAAGTAGAAATCTTGAG...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGAGCAGGAAGGTCTCATTaGACACAAAACACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGAGRSH*TQNTKC
Trigger: ACACTTGGTGTTTTGTGTTCAATGAGACCTTCCTGC...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCTTAACCTATGCCATCTaGTCCATGCAGCAAGTGATA +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGLTYAI*SMQQVI
Trigger: TATCACTTGCTGCATGGATCAGATGGCATAGGTTAA...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGTGGGCTATTCCTTCGTaGACTGAATGTGTCAATTGT +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLWAIPS*TECVNC
Trigger: ACAATTGACACATTCAGTTCACGAAGGAATAGCCCA...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTCCAGAGCAGGCTGAATaGGATGCAGGATTCATCAGC +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLPEQAE*DAGFIS
Trigger: GCTGATGAATCCTGCATCTCATTCAGCCTGCTCTGG...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615680.4
CDS-3UTR GCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCGGATCATGTGCTCTTTaGCTCGACATTTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGGSCAL*LDICFS
Trigger: AGAAAAGCAAATGTCGAGGCAAAGAGCACATGATCC...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTGACAGAAACTCCAGCTaGTGTGCTATTCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLDRNSS*CAIRLG
Trigger: CCCAAGCCGAATAGCACAGCAGCTGGAGTTTCTGTC...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCTTCGTCGGAAAACCTaGCTCTCCTTATCAAGAGCG +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLELRRKT*LSLSRA
Trigger: CGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTCCTCACATCCTGGTTaGGTCTTCGTCGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLESSHPG*VFVGKP
Trigger: AGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCTGGGTCAAGCTCTTTaGCACAAACCCAATTCCCTC +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLELGQAL*HKPNSL
Trigger: GAGGGAATTGGGTTTGTGGCAAAGAGCTTGACCCAG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCTGCAGGTAGGTCTCTaGCCATTGCATTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLELQVGL*PLHSSH
Trigger: GTGTGAAGAATGCAATGGGCAGAGACCTACCTGCAG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCAATTCTACAGTGATGTaGTGGGATCCCCATGCTGAA +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLANSTVM*WDPHAE
Trigger: TTCAGCATGGGGATCCCAGCACATCACTGTAGAATT...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGAGGATTCATCAGCAGATaGCTTTTCTGCGTAAAGCTG +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGGFISR*LFCVKL
Trigger: CAGCTTTACGCAGAAAAGGCATCTGCTGATGAATCC...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615680.4
CDS-3UTR CCA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGAGATCGGAACCGGTCTaGGGAGATGGCATACACAAT +
Preference number: 4 (lower is better)
Translates to: KKTPSAEILALYCHMVSVRSEPV*GDGIHN
Trigger: ATTGTGTATGCCATCTCCCCAGACCGGTTCCGATCT...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTCTCCTTCCACCAGTTaGTCCAGGCTGGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLESPSTS*SRLEIF
Trigger: GAAGATTTCCAGCCTGGACCAACTGGTGGAAGGAGA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp CACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCCCTGACAGCTTTCCGTaGCTTCACGCCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: HMVSVFLYSILGPCMKFIPDSFP*LHATSD
Trigger: ATCAGAAGTGGCGTGAAGCCACGGAAAGCTGTCAGG...GATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTTCAGAAGAACGATATTaGGATGCTTCACTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATSEERY*DASLFL
Trigger: TAAGAAGAGTGAAGCATCCCAATATCGTTCTTCTGA...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAAAGATACAGTTCAGTTaGCACATCCATCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQKIQFS*HIHLLN
Trigger: ATTGAGGAGATGGATGTGCCAACTGAACTGTATCTT...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTGTACAGCATCCCACTaGCGTCTCTCTCGGTGTATT +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLECTASH*RLSRCI
Trigger: AATACACCGAGAGAGACGCCAGTGGGATGCTGTACA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAATCAAAAAGCACCTCCTaGTCATCACCACTTCCACGG +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMESKSTS*SSPLPR
Trigger: CCGTGGAAGTGGTGATGACCAGGAGGTGCTTTTTGA...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCTTGATGGTAAACCCGTaGTCCAGTGCTATGACAGAA +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLALMVNP*SSAMTE
Trigger: TTCTGTCATAGCACTGGACCACGGGTTTACCATCAA...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTCTACAGTGATGTGCTaGGATCCCCATGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLESTVMC*DPHAEW
Trigger: CCATTCAGCATGGGGATCCCAGCACATCACTGTAGA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 72 bp CAGAGCACCGGGCAATTTATTGCTCTTTTCCACCAGTaGTTTCTTTCCTGTAGATGTCTGACACTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: QSTGQFIALFHQ*FLSCRCLTLSR
Trigger: TCTACTCAGTGTCAGACATCTACAGGAAAGAAACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 72 bp TTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTATaGCTCTTTTCCACCAGTTGTTTCTTTCCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LKFQPCRAPGNL*LFSTSCFFPVD
Trigger: ATCTACAGGAAAGAAACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 72 bp ATCTGGATACACCAATGTAGTCAGCATGCCTTGTGCTaGTCTGTTAACCCTCTGAGTACATCTCTGACATTC +
Preference number: 4 (lower is better)
Translates to: IWIHQCSQHALC*SVNPLSTSLTF
Trigger: GAATGTCAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTGGTGTATCCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 72 bp AAAGCAATCTGGATACACCAATGTAGTCAGCATGCCTaGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTG +
Preference number: 4 (lower is better)
Translates to: KAIWIHQCSQHA*CLSVNPLSTSL
Trigger: CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTGGTGTATCCAGATTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTACTCTGCCGAAGGACATaGTGGACTTCAAGTAGGACC +
Preference number: 4 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLLCRRT*WTSSRT
Trigger: GGTCCTACTTGAAGTCCATCATGTCCTTCGGCAGAG...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCATTCTCTCGCACCTCTaGAGGGCTTCCTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFILSHL*RASFGS
Trigger: ACTGCCAAAGGAAGCCCTTCAGAGGTGCGAGAGAAT...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR TCA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAATTCTCTCGCACCTCTaGAGGGCTTCCTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLILSHL*RASFGS
Trigger: ACTGCCAAAGGAAGCCCTTCAGAGGTGCGAGAGAAT...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp CACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCCCAGCTTGGGCCGAATaGAATCCTTATTCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: HMVSVFLYSILGPCMKFIPAWAE*NPYSLA
Trigger: TGCGAGAGAATAAGGATTTCATTCGGCCCAAGCTGG...GATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTCGCGGAGTAGAGAGCTaGCTACCAGGGGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSRGVES*LPGVPL
Trigger: TAATGGAACCCCTGGTAGTCAGCTCTCTACTCCGCG...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCGGCTATGCAGGTATTTaGTGGCGCTGGCTAGGTTGT +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFGYAGI*WRWLGC
Trigger: ACAACCTAGCCAGCGCCATCAAATACCTGCATAGCC...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGTATCTTTCCAGCTACTaGCAGCTGATGTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLYLSSY*QLMFIF
Trigger: GAAAATGAACATCAGCTGTCAGTAGCTGGAAAGATA...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTCCTTGGGAATACATTTaGGTTGGGCACCTGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLPWEYI*VGHLPL
Trigger: TAGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGG...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGACAGATGCAAATTTCATaGGATATCCCTCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGQMQIS*DIPLWL
Trigger: CAACCAGAGAGGGATATCTCATGAAATTTGCATCTG...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACTCAAGATTTCTACTTaGCTGGTCACATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKLKIST*LVTFHC
Trigger: ACAGTGGAATGTGACCAGTCAAGTAGAAATCTTGAG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAATTTAAGCCTCTCCACTaGAGTTCCTGTTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEFKPLH*SSCFPP
Trigger: TGGTGGGAAACAGGAACTTCAGTGGAGAGGCTTAAA...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTTGGACTGGAGTGAACTaGCATTATAGCATCTTTATC +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFWTGVN*HYSIFI
Trigger: GATAAAGATGCTATAATGTCAGTTCACTCCAGTCCA...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTTTGATTGGACTGGAGTaGACTGACATTATAGCATCT +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFLIGLE*TDIIAS
Trigger: AGATGCTATAATGTCAGTTCACTCCAGTCCAATCAA...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTTACACTCTGACCGCATaGCTAATTTTTAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFYTLTA*LIFKAL
Trigger: CAAGGCTTTAAAAATTAGTCATGCGGTCAGAGTGTA...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp CTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTTGTACTCAATCTTGGTGGTGCTCCTaGGGGATGATGAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: LQKFWLYIATWLVCSCTQSWWCS*GMMKLF
Trigger: AAATAGCTTCATCATCCCGCAGGAGCACCACCAAGA...TTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGACGATGTTCAGGCTATaGAGGTATTTGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLETMFRL*RYLMAL
Trigger: CAGCGCCATCAAATACCTGCATAGCCTGAACATCGT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTCCACGTATGTTGGGGTaGCACAGACTGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSPRMLG*HRLCTG
Trigger: CCCTGTACACAGTCTGTGGCACCCCAACATACGTGG...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGGTAATGAGCTCCTTTaGAGAATCGGAAACATTATC +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLGNELL*RIGNII
Trigger: GATAATGTTTCCGATTCTGCAAAGGAGCTCATTACC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGAGAAACTTGTTTAAATaGGCCAAGTCCCTACGCACC +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMRNLFK*AKSLRT
Trigger: GGTGCGTAGGGACTTGGCGCATTTAAACAAGTTTCT...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp CACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCTCTCCTTCCACCAGTTaGTCCAGGCTGGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: HMVSVFLYSILGPCMKFISPSTS*SRLEIF
Trigger: GAAGATTTCCAGCCTGGACCAACTGGTGGAAGGAGA...GATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCAAGATACAGTTCAGTTaGCACATCCATCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGKIQFS*HIHLLN
Trigger: ATTGAGGAGATGGATGTGCCAACTGAACTGTATCTT...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAAACATTATCCCAGTATaGAGAAGGAAAGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKNIIPV*RRKVHL
Trigger: CAGGTGGACTTTCCTTCTCCATACTGGGATAATGTT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTGGAAGCAGCATTTCTaGGGCGTCATCAGTACATCT +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEWKQHF*GVISTS
Trigger: AGATGTACTGATGACGCCCCAGAAATGCTGCTTCCA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGGGAATACATTTGAGTTaGGCACCTGCCTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMGIHLS*APASKT
Trigger: TGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCC...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTTGTTCCTCATTAATATaGAATCTACCTACACACCAA +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATCSSLI*NLPTHQ
Trigger: TTGGTGTGTAGGTAGATTCCATATTAATGAGGAACA...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCGATCCCCATGCTGAATaGGCCCTGCATTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFDPHAE*ALHSSE
Trigger: CTCAGAAGAATGCAGGGCCCATTCAGCATGGGGATC...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTTTCCTTCTAACGATCTaGAGCAAATCACATATTCAT +
Preference number: 4 (lower is better)
Translates to: LFATNPIPSTWDAELTATFLLTI*SKSHIH
Trigger: ATGAATATGTGATTTGCTCCAGATCGTTAGAAGGAA...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTGTTAACTGCCACCCATaGGGAGCAGGTTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSVNCHP*GAGCRK
Trigger: CTTCCTGCAACCTGCTCCCCATGGGTGGCAGTTAAC...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAATCTAGTGGACGCCCTTaGCCAGTAAACAACCATGAT +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMESSGRP*PVNNHD
Trigger: ATCATGGTTGTTTACTGGCCAAGGGCGTCCACTAGA...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGATACACACTGTGCTATaGAGGACATGTGGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMIHTVL*RTCGKA
Trigger: AGCTTTCCCACATGTCCTCCATAGCACAGTGTGTAT...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp GCTGTAAGACTTTTGCTTCAGAAATGTGAAACCTTCACCCAATCACAAACCATAGGCTGGAAATCTTCTTaGGCCCATCAATGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: AVRLLLQKCETFTQSQTIGWKSS*AHQWCR
Trigger: TCTACACCATTGATGGGCTCAAGAAGATTTCCAGCC...TATGGTTTGTGATTGGGTGAAGGTTTCACATTTCTGAAGCAAAAGTCTTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTCCTTTACTAATTCCATaGCAAGATACAGTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFPLLIP*QDTVQL
Trigger: CAACTGAACTGTATCTTGTCATGGAATTAGTAAAGG...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTACAGCAGGATATAAGTaGTTACACCTGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLTAGYK*LHLLPR
Trigger: TCTGGGCAGCAGGTGTAATCACTTATATCCTGCTGT...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCTGCCATTCAAGCATTaGGCGCTAGATAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLELPFKH*ALDRSD
Trigger: ATCTGATCTATCTAGCGCTCAATGCTTGAATGGCAG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAGCGTGGAAAAGCAGGTaGGAAAAATCACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEAWKSR*EKSQDL
Trigger: AAGATCCTGTGATTTTTCTCACCTGCTTTTCCACGC...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCTTGATTGGACTGGAGTaGACTGACATTATAGCATCT +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLALIGLE*TDIIAS
Trigger: AGATGCTATAATGTCAGTTCACTCCAGTCCAATCAA...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp AATATTGGGTCCGTGTATGAAATTCATCTAGAGCCAGGCCCTGTACAAAAATCTTATTGGGTCCGTGTATaGAATTCATCTAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: NIGSVYEIHLEPGPVQKSYWVRV*NSSRAR
Trigger: CCTGGCTCTAGATGAATTTCATACACGGACCCAATA...AGATTTTTGTACAGGGCCTGGCTCTAGATGAATTTCATACACGGACCCAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR GCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCCTTCTCCGGTCCACATaGAATAAAAATGTCATCATC +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLALLRST*NKNVII
Trigger: GATGATGACATTTTTATTGCATGTGGACCGGAGAAG...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR GCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCAAGAAGAAAGAACCGTaGGTGTGTCGAAGTTATAAA +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGKKKEP*VCRSYK
Trigger: TTTATAACTTCGACACACGCACGGTTCTTTCTTCTT...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAATTGTGTTCCCAGTGTaGTTTCTCCTCAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSIVFPV*FLLSHL
Trigger: AAGATGGCTGAGGAGAAAGCACACTGGGAACACAAT...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAATGTTCAGCCACCAGATaGAAATTTCATGAGATATCC +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKCSATR*KFHEIS
Trigger: GGATATCTCATGAAATTTGCATCTGGTGGCTGAACA...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAGCTCAGTACACTAGATaGTGTAGCAATATAGTTAAT +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQAQYTR*CSNIVN
Trigger: ATTAACTATATTGCTACAGCATCTAGTGTACTGAGC...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAAACCATGATTTAATGTaGTTGAGACTTGGTCATATG +
Preference number: 4 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQNHDLM*LRLGHM
Trigger: CATATGACCAAGTCTCAAGCACATTAAATCATGGTT...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCAGATCGGAACCGGTCTaGGGAGATGGCATACACAAT +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFRSEPV*GDGIHN
Trigger: ATTGTGTATGCCATCTCCCCAGACCGGTTCCGATCT...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp CTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTTGTACTCAAATTGTTCTCACTCCCTaGGGCAAATTCACGTTATCC +
Preference number: 4 (lower is better)
Translates to: LQKFWLYIATWLVCSCTQIVLTP*GKFTLS
Trigger: GGATAACGTGAATTTGCCCCAGGGAGTGAGAACAAT...TTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAATAGACACTTCATTCTaGATCATGTGCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKIDTSF*IMCSLP
Trigger: AGGCAAAGAGCACATGATCCAGAATGAAGTGTCTAT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCATAGACACTTCATTCTaGATCATGTGCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAIDTSF*IMCSLP
Trigger: AGGCAAAGAGCACATGATCCAGAATGAAGTGTCTAT...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTAGTCTCGGAGGAGCTTaGGGAGTAGTCTTCCGATTC +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSSLGGA*GVVFRF
Trigger: GAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACT...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTTGGAAGCAGCATTTCTaGGGCGTCATCAGTACATCT +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLWKQHF*GVISTS
Trigger: AGATGTACTGATGACGCCCCAGAAATGCTGCTTCCA...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAATTTATCCAAGTCAGTaGCCCAGGCAGGAACGTAAT +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSIYPSQ*PRQERN
Trigger: ATTACGTTCCTGCCTGGGCCACTGACTTGGATAAAT...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACCTTTACTAATTCCATaGCAAGATACAGTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKPLLIP*QDTVQL
Trigger: CAACTGAACTGTATCTTGTCATGGAATTAGTAAAGG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCACAGCAGGATATAAGTaGTTACACCTGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFTAGYK*LHLLPR
Trigger: TCTGGGCAGCAGGTGTAATCACTTATATCCTGCTGT...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCAGATGCAAATTTCATaGGATATCCCTCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEQMQIS*DIPLWL
Trigger: CAACCAGAGAGGGATATCTCATGAAATTTGCATCTG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAACAGATGCAAATTTCATaGGATATCCCTCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEQMQIS*DIPLWL
Trigger: CAACCAGAGAGGGATATCTCATGAAATTTGCATCTG...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGGCCAGTAAACAACCATaGTTTAATGTGCTTGAGACT +
Preference number: 4 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMASKQP*FNVLET
Trigger: AGTCTCAAGCACATTAAATCATGGTTGTTTACTGGC...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGAGAAAAATCTGAGTTTTaGACTGACCAACTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGEKSEF*TDQLQV
Trigger: GACTTGAAGTTGGTCAGTTCAAAACTCAGATTTTTC...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGATGTATCAGCTTAAACTaGAGGATTAGGGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGCISLN*RIRGKN
Trigger: ATTTTTCCCCCTAATCCTTCAGTTTAAGCTGATACA...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCTCTTGGTGGTGCTCCTaGGGGATGATGAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFSWWCS*GMMKLF
Trigger: AAATAGCTTCATCATCCCGCAGGAGCACCACCAAGA...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR GCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATTCTCATCCATCGAGCTaGAGACTTTGGTGGACGCAA +
Preference number: 4 (lower is better)
Translates to: IHQRLMSMASEKLSLENYSHPSS*RLWWTQ
Trigger: TTGCGTCCACCAAAGTCTGCAGCTCGATGGATGAGA...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGGGATCATGTGCTCTTTaGCTCGACATTTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEGSCAL*LDICFS
Trigger: AGAAAAGCAAATGTCGAGGCAAAGAGCACATGATCC...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTTGCTGCCATCTTGGTaGTCATACACCAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSLLPSW*SYTSRF
Trigger: GAACCTGCTGGTGTATGAGCACCAAGATGGCAGCAA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAGGGCCTGTGTTGAAATaGTTCTTTATCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEGPVLK*FFIFPA
Trigger: AGCTGGAAAGATAAAGAAGCATTTCAACACAGGCCC...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACAACACCCCTTGATCTaGAGTAAAATCAAGAAACAT +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKQHPLI*SKIKKH
Trigger: ATGTTTCTTGATTTTACTGCAGATCAAGGGGTGTTG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTCTGGGTCAAGCTCTTTaGCACAAACCCAATTCCCTC +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSLGQAL*HKPNSL
Trigger: GAGGGAATTGGGTTTGTGGCAAAGAGCTTGACCCAG...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAACACCGGGCAATTTATTaGTCTTTTCCACCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEHRAIY*SFPPVV
Trigger: AACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTG...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTCAGGCCTGGAGACACTaGACTAGGGAGATAGATTTG +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSQAWRH*TREIDL
Trigger: CAAATCTATCTCCCTAGTGCAGTGTCTCCAGGCCTG...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTCTCCTTCCACCAGTTaGTCCAGGCTGGAAATCTTC +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSSPSTS*SRLEIF
Trigger: GAAGATTTCCAGCCTGGACCAACTGGTGGAAGGAGA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTGTACAGCATCCCACTaGCGTCTCTCTCGGTGTATT +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSCTASH*RLSRCI
Trigger: AATACACCGAGAGAGACGCCAGTGGGATGCTGTACA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTGGCTTGATATCACGGTaGACGATGTTCAGGCTATGC +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSGLISR*TMFRLC
Trigger: GCATAGCCTGAACATCGTCCACCGTGATATCAAGCC...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGTGTTCCTCATTAATATaGAATCTACCTACACACCAA +
Preference number: 4 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLCSSLI*NLPTHQ
Trigger: TTGGTGTGTAGGTAGATTCCATATTAATGAGGAACA...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAAAAAGCAAAGCAATCTaGATACACCAATGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKKSKAI*IHQCSQ
Trigger: CTGACTACATTGGTGTATCCAGATTGCTTTGCTTTT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
41% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCTTAAAACTACCATCTTaGATCTTGGTGCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGLKLPS*ILVLSK
Trigger: TTTGGAAAGCACCAAGATCCAAGATGGTAGTTTTAA...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp GCTGTAAGACTTTTGCTTCAGAAATGTGAAACCTTCACCCAATCACAAACCATACATACACAATCCCTTTaGAGTATCGATCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: AVRLLLQKCETFTQSQTIHTQSL*SIDLRF
Trigger: GAAACGGAGATCGATACTTCAAAGGGATTGTGTATG...TATGGTTTGTGATTGGGTGAAGGTTTCACATTTCTGAAGCAAAAGTCTTACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCTGCAGATCCTAGCTTaGCTGATGAAAACATTCATT +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLELQILA*LMKTFI
Trigger: AATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTTGCTTCAGAAATGTaGAACCTTCACCCAATCACA +
Preference number: 4 (lower is better)
Translates to: KKTPSAEILALYCHMVSVFASEM*NLHPIT
Trigger: TGTGATTGGGTGAAGGTTTCACATTTCTGAAGCAAA...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR GCA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGCTTCTCCGGTCCACATaGAATAAAAATGTCATCATC +
Preference number: 4 (lower is better)
Translates to: KKTPSAEILALYCHMVSVLLRST*NKNVII
Trigger: GATGATGACATTTTTATTGCATGTGGACCGGAGAAG...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTCCAGCTTCAGTGATTTaGTGCCATCTTGGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSPASVI*CHLGAH
Trigger: ATGAGCACCAAGATGGCAGCAAATCACTGAAGCTGG...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAGGTAATGAGCTCCTTTaGAGAATCGGAAACATTATC +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEGNELL*RIGNII
Trigger: GATAATGTTTCCGATTCTGCAAAGGAGCTCATTACC...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTAGTCAGCATGCCTTGTaGTTGTCTGTTAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSSQHAL*LSVNPL
Trigger: CAGAGGGTTAACAGACAAGCACAAGGCATGCTGACT...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTAACATTATCCCAGTATaGAGAAGGAAAGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLNIIPV*RRKVHL
Trigger: CAGGTGGACTTTCCTTCTCCATACTGGGATAATGTT...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGATTGTTAGAACATTCTaGATTGTGTTCCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEIVRTF*IVFPVC
Trigger: GCACACTGGGAACACAATCCAGAATGTTCTAACAAT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCGGAATACATTTGAGTTaGGCACCTGCCTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFGIHLS*APASKT
Trigger: TGTCTTAGAGGCAGGTGCCCAACTCAAATGTATTCC...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTTATCTTTCCAGCTACTaGCAGCTGATGTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLYLSSY*QLMFIF
Trigger: GAAAATGAACATCAGCTGTCAGTAGCTGGAAAGATA...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAGGGTCTCAATTTCATTaGACAGAAACAAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSGSQFH*TETNAE
Trigger: TTCAGCATTTGTTTCTGTTCAATGAAATTGAGACCC...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAGGGTCTCAATTTCATTaGACAGAAACAAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEGSQFH*TETNAE
Trigger: TTCAGCATTTGTTTCTGTTCAATGAAATTGAGACCC...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTTGTTCAGCCACCAGATaGAAATTTCATGAGATATCC +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLCSATR*KFHEIS
Trigger: GGATATCTCATGAAATTTGCATCTGGTGGCTGAACA...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTAATTCTACAGTGATGTaGTGGGATCCCCATGCTGAA +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSNSTVM*WDPHAE
Trigger: TTCAGCATGGGGATCCCAGCACATCACTGTAGAATT...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp CACATGGTTAGTGTGTTCTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCATTCTGGCTCTATATTaGCACATGGTTAGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: HMVSVFLYSILGPCMKFIILALY*HMVSVF
Trigger: GAACACACTAACCATGTGGCAATATAGAGCCAGAAT...GATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp CTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTTGTACTCAATTTTGGTGTAAGAAGTaGACTTTACCACTCGACATT +
Preference number: 4 (lower is better)
Translates to: LQKFWLYIATWLVCSCTQFWCKK*TLPLDI
Trigger: AATGTCGAGTGGTAAAGTCCACTTCTTACACCAAAA...TTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTTGATGGTAAACCCGTaGTCCAGTGCTATGACAGAA +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSLMVNP*SSAMTE
Trigger: TTCTGTCATAGCACTGGACCACGGGTTTACCATCAA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGAAAAGCAAAGCAATCTaGATACACCAATGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEKSKAI*IHQCSQ
Trigger: CTGACTACATTGGTGTATCCAGATTGCTTTGCTTTT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
3UTR CAA 72 bp ATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTaGTACTCAATATTGGGTCCGTGTATGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: ILALYCHMVSVF*YSILGPCMKFI
Trigger: GATGAATTTCATACACGGACCCAATATTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR TCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCGCCAGTAAACAACCATaGTTTAATGTGCTTGAGACT +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFASKQP*FNVLET
Trigger: AGTCTCAAGCACATTAAATCATGGTTGTTTACTGGC...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTTTTTCTTACTACATTTaGTTGGACTGGAGTGAACTG +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLFSYYI*LDWSEL
Trigger: CAGTTCACTCCAGTCCAATCAAATGTAGTAAGAAAA...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTGGATCATGTGCTCTTTaGCTCGACATTTGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSGSCAL*LDICFS
Trigger: AGAAAAGCAAATGTCGAGGCAAAGAGCACATGATCC...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCACTCAATAAAATTCTATaGACTCAGAGGGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSLNKIL*TQRVNK
Trigger: CTTGTTAACCCTCTGAGTGCATAGAATTTTATTGAG...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTCTTACCCTCTAAACTaGATGCAAAGTAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSSYPLN*MQSKGL
Trigger: CAGACCCTTACTTTGCATGCAGTTTAGAGGGTAAGA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCTCAAAGATTAACCTATaGCATCTGATCCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFSKINL*HLIHAA
Trigger: TGCTGCATGGATCAGATGGCATAGGTTAATCTTTGA...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp GCTGTAAGACTTTTGCTTCAGAAATGTGAAACCTTCACCCAATCACAAACCATAGAAGAAAACTCCATCTaGAGAAATTCTGGCTCTATA +
Preference number: 4 (lower is better)
Translates to: AVRLLLQKCETFTQSQTIEENSI*RNSGSI
Trigger: TATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTC...TATGGTTTGTGATTGGGTGAAGGTTTCACATTTCTGAAGCAAAAGTCTTACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTTCAGAAGAACGATATTaGGATGCTTCACTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLSEERY*DASLFL
Trigger: TAAGAAGAGTGAAGCATCCCAATATCGTTCTTCTGA...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCTATCCAATACATTCCTaGTTGCTGGTAGTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFYPIHS*LLVVVQ
Trigger: TTGGACTACTACCAGCAACCAGGAATGTATTGGATA...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR CCA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTTCCTTCTAACGATCTaGAGCAAATCACATATTCAT +
Preference number: 4 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEFLLTI*SKSHIH
Trigger: ATGAATATGTGATTTGCTCCAGATCGTTAGAAGGAA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCTGTTGTTCTTTTCCTTaGAGAATGGGGAAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFCCSFP*RMGKKL
Trigger: CAACTTCTTCCCCATTCTCCAAGGAAAAGAACAACA...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAATTAAAACTACCATCTTaGATCTTGGTGCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: FILIFLGDYIGNLKVHMELKLPS*ILVLSK
Trigger: TTTGGAAAGCACCAAGATCCAAGATGGTAGTTTTAA...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTGAAATGGGAATCGGTTaGATGAGTTTAAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSEMGIG*MSLRMA
Trigger: AGCCATCCTTAAACTCATCCAACCGATTCCCATTTC...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCCCTTTACTAATTCCATaGCAAGATACAGTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFPLLIP*QDTVQL
Trigger: CAACTGAACTGTATCTTGTCATGGAATTAGTAAAGG...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATAATGTCAATGGCAAGTaGGAAATTGTCCCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: IHQRLMSMASEKLSLENYNVNGK*EIVPRE
Trigger: TTCTCTAGGGACAATTTCTCACTTGCCATTGACATT...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR TCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTACACTCTGACCGCATaGCTAATTTTTAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSYTLTA*LIFKAL
Trigger: CAAGGCTTTAAAAATTAGTCATGCGGTCAGAGTGTA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTCTCAATAAAATTCTATaGACTCAGAGGGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLLNKIL*TQRVNK
Trigger: CTTGTTAACCCTCTGAGTGCATAGAATTTTATTGAG...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTCAAAGATTAACCTATaGCATCTGATCCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSSKINL*HLIHAA
Trigger: TGCTGCATGGATCAGATGGCATAGGTTAATCTTTGA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCTTTTGGTGTAAGAAGTaGACTTTACCACTCGACATT +
Preference number: 4 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFFWCKK*TLPLDI
Trigger: AATGTCGAGTGGTAAAGTCCACTTCTTACACCAAAA...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTATCCAATACATTCCTaGTTGCTGGTAGTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSYPIHS*LLVVVQ
Trigger: TTGGACTACTACCAGCAACCAGGAATGTATTGGATA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR CCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATATTGTTAGAACATTCTaGATTGTGTTCCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: IHQRLMSMASEKLSLENYIVRTF*IVFPVC
Trigger: GCACACTGGGAACACAATCCAGAATGTTCTAACAAT...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTAGATTTCTACTTGACTaGTCACATTCCACTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLRFLLD*SHSTVY
Trigger: ATAAACAGTGGAATGTGACCAGTCAAGTAGAAATCT...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR TCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTGTATCAGCTTAAACTaGAGGATTAGGGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSCISLN*RIRGKN
Trigger: ATTTTTCCCCCTAATCCTTCAGTTTAAGCTGATACA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR GCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTAAGAAGAAAGAACCGTaGGTGTGTCGAAGTTATAAA +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSKKKEP*VCRSYK
Trigger: TTTATAACTTCGACACACGCACGGTTCTTTCTTCTT...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTCAGAAGAACGATATTaGGATGCTTCACTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSSEERY*DASLFL
Trigger: TAAGAAGAGTGAAGCATCCCAATATCGTTCTTCTGA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATAAAAGCAAAGCAATCTaGATACACCAATGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: IHQRLMSMASEKLSLENYKSKAI*IHQCSQ
Trigger: CTGACTACATTGGTGTATCCAGATTGCTTTGCTTTT...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR CAA 72 bp TGTGTGCGAATGAGTAACTACATTAAAACTACCATCTaGGATCTTGGTGCTTTCCAAAATTCTGAAATCACT +
Preference number: 4 (lower is better)
Translates to: CVRMSNYIKTTI*DLGAFQNSEIT
Trigger: AGTGATTTCAGAATTTTGGAAAGCACCAAGATCCAAGATGGTAGTTTTAATGTAGTTACTCATTCGCACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
3UTR CAA 72 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATaGTCCCTAGAGAACTATTCAAGGACTTTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: IHQRLMSMASEK*SLENYSRTFSY
Trigger: GTAAGAAAAAGTCCTTGAATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CCA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATTGTTCCTCATTAATATaGAATCTACCTACACACCAA +
Preference number: 4 (lower is better)
Translates to: IHQRLMSMASEKLSLENYCSSLI*NLPTHQ
Trigger: TTGGTGTGTAGGTAGATTCCATATTAATGAGGAACA...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS GCA 90 bp CTGCTGGAGCGCGGCGCCTCGGTTGCGGCCACTAGTGCAGGGATGTaGCTCGGCCCGTCCTCATTGAAATGCGGCGCTTCGCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: LLERGASVAATSAGM*LGPSSLKCGASHSL
Trigger: GAGGCTGTGCGAAGCGCCGCATTTCAATGAGGACGGGCCGAGGCACATCCCTGCACTAGTGGCCGCAACCGAGGCGCCGCGCTCCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS GCA 90 bp GTCGGGCTCGGCAGGCCGTTCACCCGCGACCCTCGGCTGTATCTCTaGGCCTTATCCCGCTCGTCGAAGTGCTCCAGCTCCATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: VGLGRPFTRDPRLYL*ALSRSSKCSSSMSL
Trigger: CAGAGACATGGAGCTGGAGCACTTCGACGAGCGGGATAAGGCGCAGAGATACAGCCGAGGGTCGCGGGTGAACGGCCTGCCGAGCCCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS TCA 90 bp CGGTTGCGGCCACTAGTGCAGGGATGTGCCTCGGCCCGTCCTCATTaGAATGCGGCGCTTCGCACAGCCTCACTCCAGCCTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RLRPLVQGCASARPH*NAALRTASLQPLSP
Trigger: TGGAGAGAGAGGCTGGAGTGAGGCTGTGCGAAGCGCCGCATTTCAATGAGGACGGGCCGAGGCACATCCCTGCACTAGTGGCCGCAACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS GCA 90 bp GCGGCCACTAGTGCAGGGATGTGCCTCGGCCCGTCCTCATTGAAATaGGGCGCTTCGCACAGCCTCACTCCAGCCTCTCTCTCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: AATSAGMCLGPSSLK*GASHSLTPASLSRG
Trigger: TCCTCTGGAGAGAGAGGCTGGAGTGAGGCTGTGCGAAGCGCCGCATTTCAATGAGGACGGGCCGAGGCACATCCCTGCACTAGTGGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS-3UTR CAA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTGGAGGCAGGGGACTaGCTACGCCTGGACGGTCCT +
Preference number: 5 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSVEAGD*LRLDGP
Trigger: AGGACCGTCCAGGCGTAGCAAGTCCCCTGCCTCCAC...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS GCA 90 bp CGGGAGGAGCTGGCTGCGCCTTGTACCGGCTCCTCACATCCTGGTTaGGTCTTCGTCGGAAAACCTGCCTCTCCTTATCAAGAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: REELAAPCTGSSHPG*VFVGKPASPYQERW
Trigger: CCACCGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGTGGAGGCAGGGGACTaGCTACGCCTGGACGGTCCT +
Preference number: 5 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGVEAGD*LRLDGP
Trigger: AGGACCGTCCAGGCGTAGCAAGTCCCCTGCCTCCAC...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS CCA 90 bp GCTTGGGGAGTAGTCTTCCGATTCCGAGTTGAGTTCGGGAGGAGCTaGCTGCGCCTTGTACCGGCTCCTCACATCCTGGTTGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: AWGVVFRFRVEFGRS*LRLVPAPHILVASS
Trigger: CGAAGACGCAACCAGGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGACTACTCCCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGATGGGCTTGGCGACTaGCCTGAGCGCGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGDGLGD*PERGVE
Trigger: CTCTACTCCGCGCTCAGGCAAGTCGCCAAGCCCATC...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS TCA 90 bp GCCATCGTTCTCATCCATCGAGCTGCAGACTTTGGTGGACGCAAGTaGCGTAGAGGAGCCGCCATGCTGAGAGCTCCTCTGCTTCCGCAG +
Preference number: 5 (lower is better)
Translates to: AIVLIHRAADFGGRK*RRGAAMLRAPLLPQ
Trigger: CTGCGGAAGCAGAGGAGCTCTCAGCATGGCGGCTCCTCTACGTCACTTGCGTCCACCAAAGTCTGCAGCTCGATGGATGAGAACGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS TCA 90 bp GAACAGTCTCGGAGGAGCTTGGGGAGTAGTCTTCCGATTCCGAGTTaGGTTCGGGAGGAGCTGGCTGCGCCTTGTACCGGCTCCTCACAT +
Preference number: 5 (lower is better)
Translates to: EQSRRSLGSSLPIPS*VREELAAPCTGSSH
Trigger: ATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS GCA 90 bp CGCGACCCTCGGCTGTATCTCTGCGCCTTATCCCGCTCGTCGAAGTaGTCCAGCTCCATGTCTCTGCCGAAGGACATGATGGACTTCAAG +
Preference number: 5 (lower is better)
Translates to: RDPRLYLCALSRSSK*SSSMSLPKDMMDFK
Trigger: CTTGAAGTCCATCATGTCCTTCGGCAGAGACATGGAGCTGGAGCACTTCGACGAGCGGGATAAGGCGCAGAGATACAGCCGAGGGTCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS CCA 90 bp AGTTCGGGAGGAGCTGGCTGCGCCTTGTACCGGCTCCTCACATCCTaGTTGCGTCTTCGTCGGAAAACCTGCCTCTCCTTATCAAGAGCG +
Preference number: 5 (lower is better)
Translates to: SSGGAGCALYRLLTS*LRLRRKTCLSLSRA
Trigger: CGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATGGAGCTGGCTGCGCCTaGTACCGGCTCCTCACATCC +
Preference number: 5 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNGAGCA*YRLLTS
Trigger: GGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCC...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCACCCAATTCCCTCCACTaGGGATGCAGAACTCACTGC +
Preference number: 5 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSPNSLH*GCRTHC
Trigger: GCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGG...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CCA 90 bp TGGAGGCAGGGGACTTGCTACGCCTGGACGGTCCTGGGCTCTTGGTaGTGCTCCTGCGGGATGATGAAGCTATTTTGGTGTAAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: WRQGTCYAWTVLGSW*CSCGMMKLFWCKKW
Trigger: CCACTTCTTACACCAAAATAGCTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCCCTGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS CCA 90 bp TGGTGGAGGCAGGGGACTTGCTACGCCTGGACGGTCCTGGGCTCTTaGTGGTGCTCCTGCGGGATGATGAAGCTATTTTGGTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: WWRQGTCYAWTVLGS*WCSCGMMKLFWCKK
Trigger: CTTCTTACACCAAAATAGCTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCCCTGCCTCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAAGCGCGGCGCCTCGGTaGCGGCCACTAGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQSAAPR*RPLVQG
Trigger: TCCCTGCACTAGTGGCCGCAACCGAGGCGCCGCGCT...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATGATGGGCTTGGCGACTaGCCTGAGCGCGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNDGLGD*PERGVE
Trigger: CTCTACTCCGCGCTCAGGCAAGTCGCCAAGCCCATC...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS GCA 90 bp AGGCAGGGGACTTGCTACGCCTGGACGGTCCTGGGCTCTTGGTGGTaGTCCTGCGGGATGATGAAGCTATTTTGGTGTAAGAAGTGGACT +
Preference number: 5 (lower is better)
Translates to: RQGTCYAWTVLGSWW*SCGMMKLFWCKKWT
Trigger: AGTCCACTTCTTACACCAAAATAGCTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS-3UTR CAA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCGAAGCCGAGGTGGTCTaGACGTTCACCGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSEAEVV*TFTDQL
Trigger: CAACTGGTCGGTGAACGTCAAGACCACCTCGGCTTC...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTGACGGTCCTGGGCTCTaGGTGGTGCTCCTGCGGGAT +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATDGPGL*VVLLRD
Trigger: ATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTC...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCAGGCTATGCAGGTATTaGATGGCGCTGGCTAGGTTG +
Preference number: 5 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASRLCRY*MALARL
Trigger: CAACCTAGCCAGCGCCATCAAATACCTGCATAGCCT...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCCCCAGCTTCAGTGATTaGCTGCCATCTTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASPSFSD*LPSWCS
Trigger: TGAGCACCAAGATGGCAGCAAATCACTGAAGCTGGG...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTGGAGCTGGCTGCGCCTaGTACCGGCTCCTCACATCC +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATGAGCA*YRLLTS
Trigger: GGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCC...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCCAGTCTCGGAGGAGCTaGGGGAGTAGTCTTCCGATT +
Preference number: 5 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGQSRRS*GSSLPI
Trigger: AATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTG...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAACCTTGGGAATACATTaGAGTTGGGCACCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSTLGIH*SWAPAS
Trigger: AGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTGATGGGCTTGGCGACTaGCCTGAGCGCGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATDGLGD*PERGVE
Trigger: CTCTACTCCGCGCTCAGGCAAGTCGCCAAGCCCATC...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGATGGCGCTGGCTAGGTaGTACAGCATCCCACTGGCG +
Preference number: 5 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLMALAR*YSIPLA
Trigger: CGCCAGTGGGATGCTGTACAACCTAGCCAGCGCCAT...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCAGGCTATGCAGGTATTaGATGGCGCTGGCTAGGTTG +
Preference number: 5 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGRLCRY*MALARL
Trigger: CAACCTAGCCAGCGCCATCAAATACCTGCATAGCCT...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAGCTGTGCTATTCGGCTaGGGGCCTGTGTTGAAATGC +
Preference number: 5 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAAVLFG*GPVLKC
Trigger: GCATTTCAACACAGGCCCCAAGCCGAATAGCACAGC...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCACAGTCTCGGAGGAGCTaGGGGAGTAGTCTTCCGATT +
Preference number: 5 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAQSRRS*GSSLPI
Trigger: AATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTG...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCCCAATTCCCTCCACTaGGGATGCAGAACTCACTGC +
Preference number: 5 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSPNSLH*GCRTHC
Trigger: GCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCACCTTGGGAATACATTaGAGTTGGGCACCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASTLGIH*SWAPAS
Trigger: AGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGT...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS GCA 90 bp GGGACTTGCTACGCCTGGACGGTCCTGGGCTCTTGGTGGTGCTCCTaGGGGATGATGAAGCTATTTTGGTGTAAGAAGTGGACTTTACCA +
Preference number: 5 (lower is better)
Translates to: GTCYAWTVLGSWWCS*GMMKLFWCKKWTLP
Trigger: TGGTAAAGTCCACTTCTTACACCAAAATAGCTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS-3UTR CAA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGACGGTCCTGGGCTCTaGGTGGTGCTCCTGCGGGAT +
Preference number: 5 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLDGPGL*VVLLRD
Trigger: ATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTTGGTGGGTGATGGGCTaGGCGACTTGCCTGAGCGCG +
Preference number: 5 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFWWVMG*ATCLSA
Trigger: CGCGCTCAGGCAAGTCGCCAAGCCCATCACCCACCA...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTATGGCGCTGGCTAGGTaGTACAGCATCCCACTGGCG +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATMALAR*YSIPLA
Trigger: CGCCAGTGGGATGCTGTACAACCTAGCCAGCGCCAT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCCCCAGCTTCAGTGATTaGCTGCCATCTTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSPSFSD*LPSWCS
Trigger: TGAGCACCAAGATGGCAGCAAATCACTGAAGCTGGG...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGGCCCAGATGTCCACCTaGAGGCCGTATCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLAQMST*RPYPVS
Trigger: AGAGACTGGATACGGCCTCAAGGTGGACATCTGGGC...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCTTCACACTTTTAGAGTaGAGGCCAGGCTGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASFTLLE*RPGCRA
Trigger: AGCTCTACAGCCTGGCCTCAACTCTAAAAGTGTGAA...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCCAGCATGCCTTGTGCTaGTCTGTTAACCCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGQHALC*SVNPLS
Trigger: ACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTG...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCTGTAGTCAGCATGCCTaGTGCTTGTCTGTTAACCCT +
Preference number: 5 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASCSQHA*CLSVNP
Trigger: AGGGTTAACAGACAAGCACAAGGCATGCTGACTACA...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAAGCGCGGCGCCTCGGTaGCGGCCACTAGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: FILIFLGDYIGNLKVHMESAAPR*RPLVQG
Trigger: TCCCTGCACTAGTGGCCGCAACCGAGGCGCCGCGCT...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp CTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTTGTACTCAAAGCGCGGCGCCTCGGTaGCGGCCACTAGTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LQKFWLYIATWLVCSCTQSAAPR*RPLVQG
Trigger: TCCCTGCACTAGTGGCCGCAACCGAGGCGCCGCGCT...TTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CAA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCGTGTACTCCAGTTTCTaGAAGGGCTCTATGGAGCCA +
Preference number: 5 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSVYSSF*KGSMEP
Trigger: TGGCTCCATAGAGCCCTTCAAGAAACTGGAGTACAC...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp CTTGTACTCAATATTGGGTCCGTGTATGAAATTCATCTAGAGCCAGGCCCTGTAGACGGTCCTGGGCTCTaGGTGGTGCTCCTGCGGGAT +
Preference number: 5 (lower is better)
Translates to: LVLNIGSVYEIHLEPGPVDGPGL*VVLLRD
Trigger: ATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTC...TACAGGGCCTGGCTCTAGATGAATTTCATACACGGACCCAATATTGAGTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCGATGGGCTTGGCGACTaGCCTGAGCGCGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGDGLGD*PERGVE
Trigger: CTCTACTCCGCGCTCAGGCAAGTCGCCAAGCCCATC...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCTGGTGGGTGATGGGCTaGGCGACTTGCCTGAGCGCG +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAWWVMG*ATCLSA
Trigger: CGCGCTCAGGCAAGTCGCCAAGCCCATCACCCACCA...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGGCTGTGCTATTCGGCTaGGGGCCTGTGTTGAAATGC +
Preference number: 5 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKAVLFG*GPVLKC
Trigger: GCATTTCAACACAGGCCCCAAGCCGAATAGCACAGC...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGCCCAATTCCCTCCACTaGGGATGCAGAACTCACTGC +
Preference number: 5 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLPNSLH*GCRTHC
Trigger: GCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGG...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATTTCTCCTCAGCCATCTaGCAAAGCAACTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNFSSAI*QSNCLQ
Trigger: CTGGAGGCAGTTGCTTTGCAAGATGGCTGAGGAGAA...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCTCGGCCCGTCCTCATaGAAATGCGGCGCTTCGCAC +
Preference number: 5 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLLGPSS*KCGASH
Trigger: GTGCGAAGCGCCGCATTTCAATGAGGACGGGCCGAG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS-3UTR CAA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGGAAATGGGAATCGGTaGGATGAGTTTAAGGATGGC +
Preference number: 5 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGGNGNR*DEFKDG
Trigger: GCCATCCTTAAACTCATCCAACCGATTCCCATTTCC...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCGACACAGTCTTAGTGTaGGACCTGAATACCAACGGC +
Preference number: 5 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSDTVLV*DLNTNG
Trigger: GCCGTTGGTATTCAGGTCCAACACTAAGACTGTGTC...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379893.5
ENST00000615680.4
CDS GCA 90 bp TTGTACCGGCTCCTCACATCCTGGTTGCGTCTTCGTCGGAAAACCTaGCTCTCCTTATCAAGAGCGGTGGTTGCTATGACAGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: LYRLLTSWLRLRRKT*LSLSRAVVAMTETP
Trigger: TGGAGTTTCTGTCATAGCAACCACCGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCGGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000379893.5
CDS-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAATCTTCCGATTCCGAGTaGAGTTCGGGAGGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQSSDSE*SSGGAG
Trigger: GCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGA...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGTTCTCCTCAGCCATCTaGCAAAGCAACTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKFSSAI*QSNCLQ
Trigger: CTGGAGGCAGTTGCTTTGCAAGATGGCTGAGGAGAA...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCACATGGAATTGTCTaGCCAGTGGTTTATTCACTG +
Preference number: 5 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGAHGIV*PVVYSL
Trigger: CAGTGAATAAACCACTGGCAAGACAATTCCATGTGC...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTTCTCCCTCAGCACGATaGAGCTTCAGCGCAAGGGAT +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATSPSAR*SFSARD
Trigger: ATCCCTTGCGCTGAAGCTCAATCGTGCTGAGGGAGA...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp AGAGTCCCCCTAGACGTCGATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAATGGCAAGTGAGAAATaGTCCCTAGAGAACTATTCA +
Preference number: 5 (lower is better)
Translates to: RVPLDVDGKRPEPCTAGSMASEK*SLENYS
Trigger: TGAATAGTTCTCTAGGGACAATTTCTCACTTGCCAT...TGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCATCGACGTCTAGGGGGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATGACACAGTCTTAGTGTaGGACCTGAATACCAACGGC +
Preference number: 5 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNDTVLV*DLNTNG
Trigger: GCCGTTGGTATTCAGGTCCAACACTAAGACTGTGTC...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379893.5
ENST00000615680.4
CDS GCA 90 bp TTGTACCGGCTCCTCACATCCTGGTTGCGTCTTCGTCGGAAAACCTaGCTCTCCTTATCAAGAGCGGTGGTCTTATCCAATACATTCCTG +
Preference number: 5 (lower is better)
Translates to: LYRLLTSWLRLRRKT*LSLSRAVVLSNTFL
Trigger: CAGGAATGTATTGGATAAGACCACCGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCGGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTGAAGCCGAGGTGGTCTaGACGTTCACCGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFEAEVV*TFTDQL
Trigger: CAACTGGTCGGTGAACGTCAAGACCACCTCGGCTTC...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATATGATGGTGACCAGCTaGGGCCGAATGAAATCCTTA +
Preference number: 5 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNMMVTS*GRMKSL
Trigger: TAAGGATTTCATTCGGCCCAAGCTGGTCACCATCAT...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp CTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTTCTTGTACTCAAGTGGAGGCAGGGGACTaGCTACGCCTGGACGGTCCT +
Preference number: 5 (lower is better)
Translates to: LQKFWLYIATWLVCSCTQVEAGD*LRLDGP
Trigger: AGGACCGTCCAGGCGTAGCAAGTCCCCTGCCTCCAC...TTGAGTACAAGAACACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CAA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTGGTGGGTGATGGGCTaGGCGACTTGCCTGAGCGCG +
Preference number: 5 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEWWVMG*ATCLSA
Trigger: CGCGCTCAGGCAAGTCGCCAAGCCCATCACCCACCA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AATATTGGGTCCGTGTATGAAATTCATCTAGAGCCAGGCCCTGTACAAAAATCTTGGTGGGTGATGGGCTaGGCGACTTGCCTGAGCGCG +
Preference number: 5 (lower is better)
Translates to: NIGSVYEIHLEPGPVQKSWWVMG*ATCLSA
Trigger: CGCGCTCAGGCAAGTCGCCAAGCCCATCACCCACCA...AGATTTTTGTACAGGGCCTGGCTCTAGATGAATTTCATACACGGACCCAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTATCGAGCTGCAGACTTaGGTGGACGCAAGTGACGTA +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATIELQT*VDASDV
Trigger: TACGTCACTTGCGTCCACCAAAGTCTGCAGCTCGAT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCATGGCGCTGGCTAGGTaGTACAGCATCCCACTGGCG +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAMALAR*YSIPLA
Trigger: CGCCAGTGGGATGCTGTACAACCTAGCCAGCGCCAT...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCCCAGCTTCAGTGATTaGCTGCCATCTTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATPSFSD*LPSWCS
Trigger: TGAGCACCAAGATGGCAGCAAATCACTGAAGCTGGG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCGCCCAGATGTCCACCTaGAGGCCGTATCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGAQMST*RPYPVS
Trigger: AGAGACTGGATACGGCCTCAAGGTGGACATCTGGGC...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATGGGATGCTCAAGTACTaGAACAGCAGAAAATCGCTG +
Preference number: 5 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNGMLKY*NSRKSL
Trigger: CAGCGATTTTCTGCTGTTCAAGTACTTGAGCATCCC...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACTCCTCACATCCTGGTaGCGTCTTCGTCGGAAAACC +
Preference number: 5 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQLLTSW*RLRRKT
Trigger: GGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAGGAGCTGGCTGCGCCTaGTACCGGCTCCTCACATCC +
Preference number: 5 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEGAGCA*YRLLTS
Trigger: GGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCC...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTTCTTCCGATTCCGAGTaGAGTTCGGGAGGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFSSDSE*SSGGAG
Trigger: GCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGA...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCTCTTCCGATTCCGAGTaGAGTTCGGGAGGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGSSDSE*SSGGAG
Trigger: GCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGA...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCAATTGGCCTTAACCCTTaGAGGACTCTATTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: HLPLRHPRRILSEHCGDAIGLNP*RTLLAA
Trigger: TGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAAT...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACCCAATTCCCTCCACTaGGGATGCAGAACTCACTGC +
Preference number: 5 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQPNSLH*GCRTHC
Trigger: GCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCATGGCAAGTGAGAAATaGTCCCTAGAGAACTATTCA +
Preference number: 5 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASMASEK*SLENYS
Trigger: TGAATAGTTCTCTAGGGACAATTTCTCACTTGCCAT...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp ACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCGCTAGCAAACCTTTCAGAAACTaGTTTAAATGCGCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: TKHKTSCGDSLRVCAGASKPFRN*FKCAKS
Trigger: GGACTTGGCGCATTTAAACAAGTTTCTGAAAGGTTT...GCTAGCGCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp AATATTGGGTCCGTGTATGAAATTCATCTAGAGCCAGGCCCTGTACAAAAATCTGATGGGCTTGGCGACTaGCCTGAGCGCGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: NIGSVYEIHLEPGPVQKSDGLGD*PERGVE
Trigger: CTCTACTCCGCGCTCAGGCAAGTCGCCAAGCCCATC...AGATTTTTGTACAGGGCCTGGCTCTAGATGAATTTCATACACGGACCCAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CAA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATTGGATCATGTGCTCTTaGCCTCGACATTTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNWIMCS*PRHLLF
Trigger: GAAAAGCAAATGTCGAGGCAAAGAGCACATGATCCA...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCTCTCTCTCGGTGTATTaGTTAGTGGAAGTAATGGCA +
Preference number: 5 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSSLSVY*LVEVMA
Trigger: TGCCATTACTTCCACTAACAAATACACCGAGAGAGA...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTGCTGTGCTATTCGGCTaGGGGCCTGTGTTGAAATGC +
Preference number: 5 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFAVLFG*GPVLKC
Trigger: GCATTTCAACACAGGCCCCAAGCCGAATAGCACAGC...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTAAAGACCCTGATCTCTaGATGGTAAACCCGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATKDPDL*MVNPWS
Trigger: GGACCACGGGTTTACCATCAAGAGATCAGGGTCTTT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTCTCCTCACATCCTGGTaGCGTCTTCGTCGGAAAACC +
Preference number: 5 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFLLTSW*RLRRKT
Trigger: GGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAG...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTGGAGCTGGCTGCGCCTaGTACCGGCTCCTCACATCC +
Preference number: 5 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLGAGCA*YRLLTS
Trigger: GGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCC...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCAGTCTCGGAGGAGCTaGGGGAGTAGTCTTCCGATT +
Preference number: 5 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLQSRRS*GSSLPI
Trigger: AATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ATGGGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAAGGTGCACATGGAATaGTCTTGCCAGTGGTTTATT +
Preference number: 5 (lower is better)
Translates to: MGKGLSHAPQAQYTRCCSKVHME*SCQWFI
Trigger: AATAAACCACTGGCAAGACAATTCCATGTGCACCTT...GCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTACCTTGGGAATACATTaGAGTTGGGCACCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATTLGIH*SWAPAS
Trigger: AGAGGCAGGTGCCCAACTCAAATGTATTCCCAAGGT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGAGAGCCCAGCAAACCTaGGGAATACATTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLRAQQT*GIHLSW
Trigger: CCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCT...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCACCATAGTTTCAGGGTaGAAGAGTAAAAATGCAGCA +
Preference number: 5 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGTIVSG*KSKNAA
Trigger: TGCTGCATTTTTACTCTTCAACCCTGAAACTATGGT...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGTTCACACTTTTAGAGTaGAGGCCAGGCTGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLFTLLE*RPGCRA
Trigger: AGCTCTACAGCCTGGCCTCAACTCTAAAAGTGTGAA...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTCAGCATGCCTTGTGCTaGTCTGTTAACCCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATQHALC*SVNPLS
Trigger: ACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTG...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGTGTAGTCAGCATGCCTaGTGCTTGTCTGTTAACCCT +
Preference number: 5 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKCSQHA*CLSVNP
Trigger: AGGGTTAACAGACAAGCACAAGGCATGCTGACTACA...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGAGCGCAAGGGATAGAGTaGTCTAGTGGACGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGAQGIE*SSGRPW
Trigger: CCAAGGGCGTCCACTAGACAACTCTATCCCTTGCGC...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp CACCTGCCTCTAAGACACCCCAGGAGAATCCTCTCTGAGCACTGTGGTGATGCACTACCATCTTGGATCTaGGTGCTTTCCAAAATTCTG +
Preference number: 5 (lower is better)
Translates to: HLPLRHPRRILSEHCGDALPSWI*VLSKIL
Trigger: CAGAATTTTGGAAAGCACCAAGATCCAAGATGGTAG...TGCATCACCACAGTGCTCAGAGAGGATTCTCCTGGGGTGTCTTAGAGGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp TCACTCACCAAGCACAAGACAAGCTGTGGTGACTCCCTGAGAGTCTGCGCTGGCAAACCTTTCAGAAACTaGTTTAAATGCGCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: SLTKHKTSCGDSLRVCAGKPFRN*FKCAKS
Trigger: GGACTTGGCGCATTTAAACAAGTTTCTGAAAGGTTT...GCCAGCGCAGACTCTCAGGGAGTCACCACAGCTTGTCTTGTGCTTGGTGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCTCTGAAGGGCTTCCTTaGGCAGTGGCCAGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLASEGLP*AVASED
Trigger: GTCTTCACTGGCCACTGCCAAAGGAAGCCCTTCAGA...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATTCTCTCTCGGTGTATTaGTTAGTGGAAGTAATGGCA +
Preference number: 5 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNSLSVY*LVEVMA
Trigger: TGCCATTACTTCCACTAACAAATACACCGAGAGAGA...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCAGGCTATGCAGGTATTaGATGGCGCTGGCTAGGTTG +
Preference number: 5 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGRLCRY*MALARL
Trigger: CAACCTAGCCAGCGCCATCAAATACCTGCATAGCCT...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGGCCCAGATGTCCACCTaGAGGCCGTATCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMAQMST*RPYPVS
Trigger: AGAGACTGGATACGGCCTCAAGGTGGACATCTGGGC...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTGGGATGCTCAAGTACTaGAACAGCAGAAAATCGCTG +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATGMLKY*NSRKSL
Trigger: CAGCGATTTTCTGCTGTTCAAGTACTTGAGCATCCC...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGCTGTGCTATTCGGCTaGGGGCCTGTGTTGAAATGC +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAAVLFG*GPVLKC
Trigger: GCATTTCAACACAGGCCCCAAGCCGAATAGCACAGC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCCTCCTCACATCCTGGTaGCGTCTTCGTCGGAAAACC +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLALLTSW*RLRRKT
Trigger: GGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAG...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGTCTTCCGATTCCGAGTaGAGTTCGGGAGGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMSSDSE*SSGGAG
Trigger: GCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGA...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAAAAGGCCTGAGCCATGCACCGCAGGCTCAGTACACTAGATGCTGTAGCAATGCTCTTTTCCACCAGTaGTTTCTTTCCTGTAGATGT +
Preference number: 5 (lower is better)
Translates to: GKGLSHAPQAQYTRCCSNALFHQ*FLSCRC
Trigger: ACATCTACAGGAAAGAAACAACTGGTGGAAAAGAGC...ATTGCTACAGCATCTAGTGTACTGAGCCTGCGGTGCATGGCTCAGGCCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTAGAGCCCAGCAAACCTaGGGAATACATTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATRAQQT*GIHLSW
Trigger: CCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACAGCATGCCTTGTGCTaGTCTGTTAACCCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQQHALC*SVNPLS
Trigger: ACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGGCGCAAGGGATAGAGTaGTCTAGTGGACGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMAQGIE*SSGRPW
Trigger: CCAAGGGCGTCCACTAGACAACTCTATCCCTTGCGC...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS CCA 90 bp GTCCTGGGCTCTTGGTGGTGCTCCTGCGGGATGATGAAGCTATTTTaGTGTAAGAAGTGGACTTTACCACTCGACATTCACTTTCATCTA +
Preference number: 5 (lower is better)
Translates to: VLGSWWCSCGMMKLF*CKKWTLPLDIHFHL
Trigger: TAGATGAAAGTGAATGTCGAGTGGTAAAGTCCACTTCTTACACCAAAATAGCTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCGTGTACTCCAGTTTCTaGAAGGGCTCTATGGAGCCA +
Preference number: 5 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGVYSSF*KGSMEP
Trigger: TGGCTCCATAGAGCCCTTCAAGAAACTGGAGTACAC...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGGAAGCCGAGGTGGTCTaGACGTTCACCGACCAGTTG +
Preference number: 5 (lower is better)
Translates to: KKTPSAEILALYCHMVSVEAEVV*TFTDQL
Trigger: CAACTGGTCGGTGAACGTCAAGACCACCTCGGCTTC...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CAA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTGGTGGGTGATGGGCTaGGCGACTTGCCTGAGCGCG +
Preference number: 5 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSWWVMG*ATCLSA
Trigger: CGCGCTCAGGCAAGTCGCCAAGCCCATCACCCACCA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCATCGAGCTGCAGACTTaGGTGGACGCAAGTGACGTA +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAIELQT*VDASDV
Trigger: TACGTCACTTGCGTCCACCAAAGTCTGCAGCTCGAT...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGTCTCTCTCGGTGTATTaGTTAGTGGAAGTAATGGCA +
Preference number: 5 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKSLSVY*LVEVMA
Trigger: TGCCATTACTTCCACTAACAAATACACCGAGAGAGA...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCAGGCTATGCAGGTATTaGATGGCGCTGGCTAGGTTG +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLARLCRY*MALARL
Trigger: CAACCTAGCCAGCGCCATCAAATACCTGCATAGCCT...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAGCACCGGGCAATTTATaGCTCTTTTCCACCAGTTGT +
Preference number: 5 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQAPGNL*LFSTSC
Trigger: ACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTGC...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTATTCCCTCTTTCTGTTaGAAATTCCAGCCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATIPSFC*KFQPCR
Trigger: TCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAAT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAATTCTCCTCAGCCATCTaGCAAAGCAACTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKFSSAI*QSNCLQ
Trigger: CTGGAGGCAGTTGCTTTGCAAGATGGCTGAGGAGAA...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCTTCTCCTCAGCCATCTaGCAAAGCAACTGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAFSSAI*QSNCLQ
Trigger: CTGGAGGCAGTTGCTTTGCAAGATGGCTGAGGAGAA...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGAAGGTGCACATGGAATaGTCTTGCCAGTGGTTTATT +
Preference number: 5 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKKVHME*SCQWFI
Trigger: AATAAACCACTGGCAAGACAATTCCATGTGCACCTT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGTGCTACTTTGTGATTTaGCGTGTTATCACTTCCGGA +
Preference number: 5 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLCYFVI*RVITSG
Trigger: TCCGGAAGTGATAACACGCAAAATCACAAAGTAGCA...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACCTTGGGAATACATTTGACTCAAGATTTCTACTaGACTGGTCACATTCCACTG +
Preference number: 5 (lower is better)
Translates to: LSGCLVDPRAQQTLGIHLTQDFY*TGHIPL
Trigger: CAGTGGAATGTGACCAGTCAAGTAGAAATCTTGAGT...CAAATGTATTCCCAAGGTTTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGACTCAAGATTTCTACTaGACTGGTCACATTCCACTG +
Preference number: 5 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKTQDFY*TGHIPL
Trigger: CAGTGGAATGTGACCAGTCAAGTAGAAATCTTGAGT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS TCA 90 bp GGGCCTGTGTTGAAATGCTTCTTTATCTTTCCAGCTACTGACAGCTaGTGTTCATTTTCTGGGAGGCCATCATCATTAACCCAGGGATGC +
Preference number: 5 (lower is better)
Translates to: GPVLKCFFIFPATDS*CSFSGRPSSLTQGC
Trigger: GCATCCCTGGGTTAATGATGATGGCCTCCCAGAAAATGAACATCAGCTGTCAGTAGCTGGAAAGATAAAGAAGCATTTCAACACAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS TCA 90 bp CCTTATCCAATACATTCCTGGTTGCTGGTAGTAGTCCAAAGACCCTaGTCTCTTGATGGTAAACCCGTGGTCCAGTGCTATGACAGAAAC +
Preference number: 5 (lower is better)
Translates to: PYPIHSWLLVVVQRP*SLDGKPVVQCYDRN
Trigger: GTTTCTGTCATAGCACTGGACCACGGGTTTACCATCAAGAGATCAGGGTCTTTGGACTACTACCAGCAACCAGGAATGTATTGGATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477664.1
CDS TCA 90 bp AGGAACTGGTTAATGGAGACTGCCAGCACGTTGCCATGGAAACACTaGCTGTTGAGCTGCACCATCTCATACCTTATCCAATACATTCCT +
Preference number: 5 (lower is better)
Translates to: RNWLMETASTLPWKH*LLSCTISYLIQYIP
Trigger: AGGAATGTATTGGATAAGGTATGAGATGGTGCAGCTCAACAGTCAGTGTTTCCATGGCAACGTGCTGGCAGTCTCCATTAACCAGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477664.1
CDS GCA 90 bp AATCAAAAGCATGTTTATCCACCGAAGGAACTGGTTAATGGAGACTaGCAGCACGTTGCCATGGAAACACTGACTGTTGAGCTGCACCAT +
Preference number: 5 (lower is better)
Translates to: NQKHVYPPKELVNGD*QHVAMETLTVELHH
Trigger: ATGGTGCAGCTCAACAGTCAGTGTTTCCATGGCAACGTGCTGGCAGTCTCCATTAACCAGTTCCTTCGGTGGATAAACATGCTTTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477664.1
CDS-3UTR CAA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAATCTGAAGGGCTTCCTTaGGCAGTGGCCAGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: FILIFLGDYIGNLKVHMESEGLP*AVASED
Trigger: GTCTTCACTGGCCACTGCCAAAGGAAGCCCTTCAGA...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGTCTGAAGGGCTTCCTTaGGCAGTGGCCAGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: KKTPSAEILALYCHMVSVSEGLP*AVASED
Trigger: GTCTTCACTGGCCACTGCCAAAGGAAGCCCTTCAGA...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAATGGATCATGTGCTCTTaGCCTCGACATTTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQWIMCS*PRHLLF
Trigger: GAAAAGCAAATGTCGAGGCAAAGAGCACATGATCCA...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAACAAGATACAGTTCAGTaGGCACATCCATCTCCTCAA +
Preference number: 5 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQQDTVQ*AHPSPQ
Trigger: TTGAGGAGATGGATGTGCCAACTGAACTGTATCTTG...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTGCCCAGATGTCCACCTaGAGGCCGTATCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLAQMST*RPYPVS
Trigger: AGAGACTGGATACGGCCTCAAGGTGGACATCTGGGC...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTGGGATGCTCAAGTACTaGAACAGCAGAAAATCGCTG +
Preference number: 5 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFGMLKY*NSRKSL
Trigger: CAGCGATTTTCTGCTGTTCAAGTACTTGAGCATCCC...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGAGAGCCCAGCAAACCTaGGGAATACATTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLRAQQT*GIHLSW
Trigger: CCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTTTCACACTTTTAGAGTaGAGGCCAGGCTGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFFTLLE*RPGCRA
Trigger: AGCTCTACAGCCTGGCCTCAACTCTAAAAGTGTGAA...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGTCTCCCTCAGCACGATaGAGCTTCAGCGCAAGGGAT +
Preference number: 5 (lower is better)
Translates to: AVELLHSLGIVLCFIFLESPSAR*SFSARD
Trigger: ATCCCTTGCGCTGAAGCTCAATCGTGCTGAGGGAGA...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS TCA 90 bp TCTTATCCAATACATTCCTGGTTGCTGGTAGTAGTCCAAAGACCCTaGTCTCTTGATGGTAAACCCGTGGTCCAGTGCTATGACAGAAAC +
Preference number: 5 (lower is better)
Translates to: SYPIHSWLLVVVQRP*SLDGKPVVQCYDRN
Trigger: GTTTCTGTCATAGCACTGGACCACGGGTTTACCATCAAGAGATCAGGGTCTTTGGACTACTACCAGCAACCAGGAATGTATTGGATAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS CCA 90 bp ATTGTTCTTCCGACTTTATATCGTTCTGTTATTGTAGCTGGAATCTaGAAGCCTTCCTCCGACACTTCTTCTCCAGGGCCATCGTTCTCA +
Preference number: 5 (lower is better)
Translates to: IVLPTLYRSVIVAGI*KPSSDTSSPGPSFS
Trigger: TGAGAACGATGGCCCTGGAGAAGAAGTGTCGGAGGAAGGCTTCCAGATTCCAGCTACAATAACAGAACGATATAAAGTCGGAAGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CCA 90 bp ATCTCCTATTGTTCTTCCGACTTTATATCGTTCTGTTATTGTAGCTaGAATCTGGAAGCCTTCCTCCGACACTTCTTCTCCAGGGCCATC +
Preference number: 5 (lower is better)
Translates to: ISYCSSDFISFCYCS*NLEAFLRHFFSRAI
Trigger: GATGGCCCTGGAGAAGAAGTGTCGGAGGAAGGCTTCCAGATTCCAGCTACAATAACAGAACGATATAAAGTCGGAAGAACAATAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTGGCTTGGGGCCTGTGTaGAAATGCTTCTTTATCTTT +
Preference number: 5 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFGLGPV*KCFFIF
Trigger: AAAGATAAAGAAGCATTTCAACACAGGCCCCAAGCC...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGGGCTTGGGGCCTGTGTaGAAATGCTTCTTTATCTTT +
Preference number: 5 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLGLGPV*KCFFIF
Trigger: AAAGATAAAGAAGCATTTCAACACAGGCCCCAAGCC...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCGGCTTGGGGCCTGTGTaGAAATGCTTCTTTATCTTT +
Preference number: 5 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGGLGPV*KCFFIF
Trigger: AAAGATAAAGAAGCATTTCAACACAGGCCCCAAGCC...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCCAATACATTCCTGGTaGCTGGTAGTAGTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGPIHSW*LVVVQR
Trigger: TCTTTGGACTACTACCAGCAACCAGGAATGTATTGG...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR CAA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGATTGGCCTTAACCCTTaGAGGACTCTATTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLIGLNP*RTLLAA
Trigger: TGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAAT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGCACCGGGCAATTTATaGCTCTTTTCCACCAGTTGT +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAAPGNL*LFSTSC
Trigger: ACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTGC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCAGAGCCCAGCAAACCTaGGGAATACATTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLARAQQT*GIHLSW
Trigger: CCAACTCAAATGTATTCCCAAGGTTTGCTGGGCTCT...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CTCTTTGCCACAAACCCAATTCCCTCCACTTGGGATGCAGAACTCACTGCAACTACCATAGTTTCAGGGTaGAAGAGTAAAAATGCAGCA +
Preference number: 5 (lower is better)
Translates to: LFATNPIPSTWDAELTATTIVSG*KSKNAA
Trigger: TGCTGCATTTTTACTCTTCAACCCTGAAACTATGGT...AGTTGCAGTGAGTTCTGCATCCCAAGTGGAGGGAATTGGGTTTGTGGCAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TATTGCTTTCTTTCAACAATATCTGATGGGCCTGTTAACTGCCACCCATGGGGATTCACACTTTTAGAGTaGAGGCCAGGCTGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: YCFLSTISDGPVNCHPWGFTLLE*RPGCRA
Trigger: AGCTCTACAGCCTGGCCTCAACTCTAAAAGTGTGAA...TCCCCATGGGTGGCAGTTAACAGGCCCATCAGATATTGTTGAAAGAAAGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGATTAAAACTACCATCTaGGATCTTGGTGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKIKTTI*DLGAFQ
Trigger: TTGGAAAGCACCAAGATCCAAGATGGTAGTTTTAAT...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp GGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCACCACCATAAGTGTCCTCAAGTTTCATaGATTTGTTTGCCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: GHVSVKERRSPSPGHHHKCPQVS*ICLPLS
Trigger: GCTTAAAGGCAAACAAATCAATGAAACTTGAGGACA...CTTATGGTGGTGGCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGGAAATGGGAATCGGTaGGATGAGTTTAAGGATGGC +
Preference number: 5 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKGNGNR*DEFKDG
Trigger: GCCATCCTTAAACTCATCCAACCGATTCCCATTTCC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGGTGTACTCCAGTTTCTaGAAGGGCTCTATGGAGCCA +
Preference number: 5 (lower is better)
Translates to: KKTPSAEILALYCHMVSVVYSSF*KGSMEP
Trigger: TGGCTCCATAGAGCCCTTCAAGAAACTGGAGTACAC...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CAA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTATCGAGCTGCAGACTTaGGTGGACGCAAGTGACGTA +
Preference number: 5 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLIELQT*VDASDV
Trigger: TACGTCACTTGCGTCCACCAAAGTCTGCAGCTCGAT...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAATGGATCATGTGCTCTTaGCCTCGACATTTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKWIMCS*PRHLLF
Trigger: GAAAAGCAAATGTCGAGGCAAAGAGCACATGATCCA...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAACAAGATACAGTTCAGTaGGCACATCCATCTCCTCAA +
Preference number: 5 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKQDTVQ*AHPSPQ
Trigger: TTGAGGAGATGGATGTGCCAACTGAACTGTATCTTG...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAAAAGACCCTGATCTCTaGATGGTAAACCCGTGGTCC +
Preference number: 5 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEKDPDL*MVNPWS
Trigger: GGACCACGGGTTTACCATCAAGAGATCAGGGTCTTT...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR CAA 90 bp AAATTTCATGAGATATCCCTCTCTGGTTGTCTCGTGGATCCCAGAGCCCAGCAAACTGCAGATCCTAGCTaGACTGATGAAAACATTCAT +
Preference number: 5 (lower is better)
Translates to: KFHEISLSGCLVDPRAQQTADPS*TDENIH
Trigger: ATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAGT...TTGCTGGGCTCTGGGATCCACGAGACAACCAGAGAGGGATATCTCATGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCGCTCTTTTCCACCAGTaGTTTCTTTCCTGTAGATGT +
Preference number: 5 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGALFHQ*FLSCRC
Trigger: ACATCTACAGGAAAGAAACAACTGGTGGAAAAGAGC...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAGCACATGGAATTGTCTaGCCAGTGGTTTATTCACTG +
Preference number: 5 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKAHGIV*PVVYSL
Trigger: CAGTGAATAAACCACTGGCAAGACAATTCCATGTGC...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCGCACATGGAATTGTCTaGCCAGTGGTTTATTCACTG +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLAAHGIV*PVVYSL
Trigger: CAGTGAATAAACCACTGGCAAGACAATTCCATGTGC...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAATGCAGGAAGGTCTCATaGAACACAAAACACCAAGTG +
Preference number: 5 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKCRKVS*NTKHQV
Trigger: CACTTGGTGTTTTGTGTTCAATGAGACCTTCCTGCA...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTCTACCATCTTGGATCTaGGTGCTTTCCAAAATTCTG +
Preference number: 5 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFLPSWI*VLSKIL
Trigger: CAGAATTTTGGAAAGCACCAAGATCCAAGATGGTAG...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAATGTCAATTAAGCCTCTaGCCAACAGCAACCCCCATC +
Preference number: 5 (lower is better)
Translates to: FILIFLGDYIGNLKVHMECQLSL*PTATPI
Trigger: GATGGGGGTTGCTGTTGGCAAGAGGCTTAATTGACA...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615680.4
CDS CCA 90 bp TGGTGGTGCTCCTGCGGGATGATGAAGCTATTTTGGTGTAAGAAGTaGACTTTACCACTCGACATTCACTTTCATCTAGCAAGAAATCAT +
Preference number: 5 (lower is better)
Translates to: WWCSCGMMKLFWCKK*TLPLDIHFHLARNH
Trigger: ATGATTTCTTGCTAGATGAAAGTGAATGTCGAGTGGTAAAGTCCACTTCTTACACCAAAATAGCTTCATCATCCCGCAGGAGCACCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS-3UTR CAA 90 bp AAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTAGTGTGATGATGGTGACCAGCTaGGGCCGAATGAAATCCTTA +
Preference number: 5 (lower is better)
Translates to: KKTPSAEILALYCHMVSVMMVTS*GRMKSL
Trigger: TAAGGATTTCATTCGGCCCAAGCTGGTCACCATCAT...CACACTAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CAA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGCAAGATACAGTTCAGTaGGCACATCCATCTCCTCAA +
Preference number: 5 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMQDTVQ*AHPSPQ
Trigger: TTGAGGAGATGGATGTGCCAACTGAACTGTATCTTG...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCCCCAGCTTCAGTGATTaGCTGCCATCTTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFPSFSD*LPSWCS
Trigger: TGAGCACCAAGATGGCAGCAAATCACTGAAGCTGGG...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAGGGATGCTCAAGTACTaGAACAGCAGAAAATCGCTG +
Preference number: 5 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSGMLKY*NSRKSL
Trigger: CAGCGATTTTCTGCTGTTCAAGTACTTGAGCATCCC...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTCAGTCTCGGAGGAGCTaGGGGAGTAGTCTTCCGATT +
Preference number: 5 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSQSRRS*GSSLPI
Trigger: AATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTG...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGACTGCAGATCCTAGCTaGACTGATGAAAACATTCAT +
Preference number: 5 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLTADPS*TDENIH
Trigger: ATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAGT...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TCTTATTCCCTCTTTCTGTTTGAAATTCCAGCCCTGCAGAGCACCGGGCAATTTACCATAGTTTCAGGGTaGAAGAGTAAAAATGCAGCA +
Preference number: 5 (lower is better)
Translates to: SYSLFLFEIPALQSTGQFTIVSG*KSKNAA
Trigger: TGCTGCATTTTTACTCTTCAACCCTGAAACTATGGT...AAATTGCCCGGTGCTCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAATAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAATGCTACTTTGTGATTTaGCGTGTTATCACTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKCYFVI*RVITSG
Trigger: TCCGGAAGTGATAACACGCAAAATCACAAAGTAGCA...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GGAGATAGATTTGGTAACAAGAGTGAAAATACAGGTCTCAGACAGGACTTGGCCTGCTACTTTGTGATTTaGCGTGTTATCACTTCCGGA +
Preference number: 5 (lower is better)
Translates to: GDRFGNKSENTGLRQDLACYFVI*RVITSG
Trigger: TCCGGAAGTGATAACACGCAAAATCACAAAGTAGCA...GGCCAAGTCCTGTCTGAGACCTGTATTTTCACTCTTGTTACCAAATCTATCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CAATGTAGTCAGCATGCCTTGTGCTTGTCTGTTAACCCTCTGAGTACATCTCTGCTTTCTACACATTCCTaGACAACAGCAAAATTTCCA +
Preference number: 5 (lower is better)
Translates to: QCSQHALCLSVNPLSTSLLSTHS*TTAKFP
Trigger: TGGAAATTTTGCTGTTGTCAAGGAATGTGTAGAAAG...CAGAGATGTACTCAGAGGGTTAACAGACAAGCACAAGGCATGCTGACTACATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TACCATATGATTGGTCATGTGTCAGTAAAAGAAAGACGGTCCCCATCACCAGGCCTTTCTACACATTCCTaGACAACAGCAAAATTTCCA +
Preference number: 5 (lower is better)
Translates to: YHMIGHVSVKERRSPSPGLSTHS*TTAKFP
Trigger: TGGAAATTTTGCTGTTGTCAAGGAATGTGTAGAAAG...GCCTGGTGATGGGGACCGTCTTTCTTTTACTGACACATGACCAATCATATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCAAGATACAGTTCAGTaGGCACATCCATCTCCTCAA +
Preference number: 5 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEQDTVQ*AHPSPQ
Trigger: TTGAGGAGATGGATGTGCCAACTGAACTGTATCTTG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAGGCTTGGGGCCTGTGTaGAAATGCTTCTTTATCTTT +
Preference number: 5 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSGLGPV*KCFFIF
Trigger: AAAGATAAAGAAGCATTTCAACACAGGCCCCAAGCC...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGCCAATACATTCCTGGTaGCTGGTAGTAGTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEPIHSW*LVVVQR
Trigger: TCTTTGGACTACTACCAGCAACCAGGAATGTATTGG...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS-3UTR CAA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGATTGGCCTTAACCCTTaGAGGACTCTATTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEIGLNP*RTLLAA
Trigger: TGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAAT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp CCGCAGGCTCAGTACACTAGATGCTGTAGCAATATAGTTAATGCCCACAGAAAAACTGCAGATCCTAGCTaGACTGATGAAAACATTCAT +
Preference number: 5 (lower is better)
Translates to: PQAQYTRCCSNIVNAHRKTADPS*TDENIH
Trigger: ATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAGT...TTTTCTGTGGGCATTAACTATATTGCTACAGCATCTAGTGTACTGAGCCTGCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTGCACCGGGCAATTTATaGCTCTTTTCCACCAGTTGT +
Preference number: 5 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLAPGNL*LFSTSC
Trigger: ACAACTGGTGGAAAAGAGCAATAAATTGCCCGGTGC...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAATTCCCTCTTTCTGTTaGAAATTCCAGCCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: FILIFLGDYIGNLKVHMEIPSFC*KFQPCR
Trigger: TCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAAT...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTTGTAGTCAGCATGCCTaGTGCTTGTCTGTTAACCCT +
Preference number: 5 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLCSQHA*CLSVNP
Trigger: AGGGTTAACAGACAAGCACAAGGCATGCTGACTACA...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CCA 90 bp CAATCATGTATAGATCTTCAGGGCATGTGTTGGAAATTCCCCGGCTaGTTATGTAGGGTATATATATATATAGTACATCAGCGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: QSCIDLQGMCWKFPG*LCRVYIYIVHQRWF
Trigger: GAACCAGCGCTGATGTACTATATATATATATACCCTACATAACCAGCCGGGGAATTTCCAACACATGCCCTGAAGATCTATACATGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS-3UTR CAA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTATTGGCCTTAACCCTTaGAGGACTCTATTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLIGLNP*RTLLAA
Trigger: TGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAAT...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGGCTCTTTTCCACCAGTaGTTTCTTTCCTGTAGATGT +
Preference number: 5 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEALFHQ*FLSCRC
Trigger: ACATCTACAGGAAAGAAACAACTGGTGGAAAAGAGC...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp GCTGTAGAGCTACTCCATAGCCTTGGAATAGTGCTTTGCTTTATATTTCTAGAGAAGGTGCACATGGAATaGTCTTGCCAGTGGTTTATT +
Preference number: 5 (lower is better)
Translates to: AVELLHSLGIVLCFIFLEKVHME*SCQWFI
Trigger: AATAAACCACTGGCAAGACAATTCCATGTGCACCTT...CTCTAGAAATATAAAGCAAAGCACTATTCCAAGGCTATGGAGTAGCTCTACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAAACTCAAGATTTCTACTaGACTGGTCACATTCCACTG +
Preference number: 5 (lower is better)
Translates to: FILIFLGDYIGNLKVHMETQDFY*TGHIPL
Trigger: CAGTGGAATGTGACCAGTCAAGTAGAAATCTTGAGT...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TACAAACTAAAGATTCCTTCTGACGTCCTAGGAACCCCATTTGTTACCGTTTCAACTCAAGATTTCTACTaGACTGGTCACATTCCACTG +
Preference number: 5 (lower is better)
Translates to: YKLKIPSDVLGTPFVTVSTQDFY*TGHIPL
Trigger: CAGTGGAATGTGACCAGTCAAGTAGAAATCTTGAGT...TGAAACGGTAACAAATGGGGTTCCTAGGACGTCAGAAGGAATCTTTAGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp AATATTGGGTCCGTGTATGAAATTCATCTAGAGCCAGGCCCTGTACAAAAATCTATGGTTAGTGTGTTCTaGTACTCAATATTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: NIGSVYEIHLEPGPVQKSMVSVF*YSILGP
Trigger: CGGACCCAATATTGAGTACAAGAACACACTAACCAT...AGATTTTTGTACAGGGCCTGGCTCTAGATGAATTTCATACACGGACCCAATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS CCA 90 bp AAGTCATATGTTCAAGAGATTAAATGCTGTGGAAAGCACTTCCCTTaGAACTGCTTGAATGGAAAGTTGGCCATGATATCTATCGGCAAT +
Preference number: 5 (lower is better)
Translates to: KSYVQEIKCCGKHFP*NCLNGKLAMISIGN
Trigger: ATTGCCGATAGATATCATGGCCAACTTTCCATTCAAGCAGTTCCAAGGGAAGTGCTTTCCACAGCATTTAATCTCTTGAACATATGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS-3UTR CAA 90 bp TTGCAAATTGGCCTTAACCCTTTGAGGACTCTATTAGCAGCAAATTACCATCTTGCATACACAATCCCTTaGAAGTATCGATCTCCGTTT +
Preference number: 5 (lower is better)
Translates to: LQIGLNPLRTLLAANYHLAYTIP*KYRSPF
Trigger: AAACGGAGATCGATACTTCAAAGGGATTGTGTATGC...AAGATGGTAATTTGCTGCTAATAGAGTCCTCAAAGGGTTAAGGCCAATTTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000360631.8
CDS-3UTR CAA 90 bp GCTGTAAGACTTTTGCTTCAGAAATGTGAAACCTTCACCCAATCACAAACCATAGCATACACAATCCCTTaGAAGTATCGATCTCCGTTT +
Preference number: 5 (lower is better)
Translates to: AVRLLLQKCETFTQSQTIAYTIP*KYRSPF
Trigger: AAACGGAGATCGATACTTCAAAGGGATTGTGTATGC...TATGGTTTGTGATTGGGTGAAGGTTTCACATTTCTGAAGCAAAAGTCTTACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS-3UTR CAA 90 bp ACTGAAGTTCCTGTTTCCCACCAGTTTACGACCCTTAATGTTACTGCATGTATGTGTCCTCAAGTTTCATaGATTTGTTTGCCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: TEVPVSHQFTTLNVTACMCPQVS*ICLPLS
Trigger: GCTTAAAGGCAAACAAATCAATGAAACTTGAGGACA...CATACATGCAGTAACATTAAGGGTCGTAAACTGGTGGGAAACAGGAACTTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp TTCATCCTGATCTTCCTAGGAGACTATATAGGTAACCTAAAGGTGCACATGGAACTTTCTACACATTCCTaGACAACAGCAAAATTTCCA +
Preference number: 5 (lower is better)
Translates to: FILIFLGDYIGNLKVHMELSTHS*TTAKFP
Trigger: TGGAAATTTTGCTGTTGTCAAGGAATGTGTAGAAAG...TTCCATGTGCACCTTTAGGTTACCTATATAGTCTCCTAGGAAGATCAGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTATTCCCTCTTTCTGTTaGAAATTCCAGCCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSIPSFC*KFQPCR
Trigger: TCTGCAGGGCTGGAATTTCAAACAGAAAGAGGGAAT...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTGCACATGGAATTGTCTaGCCAGTGGTTTATTCACTG +
Preference number: 5 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSAHGIV*PVVYSL
Trigger: CAGTGAATAAACCACTGGCAAGACAATTCCATGTGC...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATTGCAGGAAGGTCTCATaGAACACAAAACACCAAGTG +
Preference number: 5 (lower is better)
Translates to: IHQRLMSMASEKLSLENYCRKVS*NTKHQV
Trigger: CACTTGGTGTTTTGTGTTCAATGAGACCTTCCTGCA...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp ATACACCAAAGATTAATGTCAATGGCAAGTGAGAAATTGTCCCTAGAGAACTATTCTCTCTCGGTGTATTaGTTAGTGGAAGTAATGGCA +
Preference number: 5 (lower is better)
Translates to: IHQRLMSMASEKLSLENYSLSVY*LVEVMA
Trigger: TGCCATTACTTCCACTAACAAATACACCGAGAGAGA...ATAGTTCTCTAGGGACAATTTCTCACTTGCCATTGACATTAATCTTTGGTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS-3UTR CAA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTGCTCTTTTCCACCAGTaGTTTCTTTCCTGTAGATGT +
Preference number: 5 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSALFHQ*FLSCRC
Trigger: ACATCTACAGGAAAGAAACAACTGGTGGAAAAGAGC...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTAAGGTGCACATGGAATaGTCTTGCCAGTGGTTTATT +
Preference number: 5 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSKVHME*SCQWFI
Trigger: AATAAACCACTGGCAAGACAATTCCATGTGCACCTT...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTTGCTACTTTGTGATTTaGCGTGTTATCACTTCCGGA +
Preference number: 5 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSCYFVI*RVITSG
Trigger: TCCGGAAGTGATAACACGCAAAATCACAAAGTAGCA...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTATCTATAGCAATGCCATaGGCCAAGTTCTTCATATTG +
Preference number: 5 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLSIAMP*AKFFIL
Trigger: CAATATGAAGAACTTGGCCAATGGCATTGCTATAGA...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS CCA 90 bp TATATCAATTGGCAATATCTACCACTTAGAACAAATAGCATTTATTaGACCTTTCTAGCAGTAGTTGTCCATAAGATTGACAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: YINWQYLPLRTNSIY*TFLAVVVHKIDSAG
Trigger: CCCTGCACTGTCAATCTTATGGACAACTACTGCTAGAAAGGTCCAATAAATGCTATTTGTTCTAAGTGGTAGATATTGCCAATTGATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS-3UTR CAA 90 bp TTCTACTTGACTGGTCACATTCCACTGTTTATTCAGCATAGATCACTCAAATTCCTTTCTACACATTCCTaGACAACAGCAAAATTTCCA +
Preference number: 5 (lower is better)
Translates to: FYLTGHIPLFIQHRSLKFLSTHS*TTAKFP
Trigger: TGGAAATTTTGCTGTTGTCAAGGAATGTGTAGAAAG...GAATTTGAGTGATCTATGCTGAATAAACAGTGGAATGTGACCAGTCAAGTAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTACTGCAGATCCTAGCTaGACTGATGAAAACATTCAT +
Preference number: 5 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSTADPS*TDENIH
Trigger: ATGAATGTTTTCATCAGTCAAGCTAGGATCTGCAGT...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS-3UTR CAA 90 bp TTAAGAAGAAAACTCCATCTGCAGAAATTCTGGCTCTATATTGCCACATGGTTATTCTTGTACTCAATATaGGGTCCGTGTATGAAATTC +
Preference number: 5 (lower is better)
Translates to: LRRKLHLQKFWLYIATWLFLYSI*GPCMKF
Trigger: GAATTTCATACACGGACCCAATATTGAGTACAAGAA...TAACCATGTGGCAATATAGAGCCAGAATTTCTGCAGATGGAGTTTTCTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379892.4
CDS TCA 90 bp TTTTCAACTGACAGTACAACACGCTATATCAGGCAATTGGTATATTaGATTCAGTGTATCTCTATTTTTCACACTATGCCTCTGTGCAAT +
Preference number: 5 (lower is better)
Translates to: FSTDSTTRYIRQLVY*IQCISIFHTMPLCN
Trigger: ATTGCACAGAGGCATAGTGTGAAAAATAGAGATACACTGAATTCAATATACCAATTGCCTGATATAGCGTGTTGTACTGTCAGTTGAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS CCA 90 bp TTTCTTTTTGCCCTGTCTAAACAAAGCCATGGGCTCTATATCAATTaGCAATATCTACCACTTAGAACAAATAGCATTTATTGGACCTTT +
Preference number: 5 (lower is better)
Translates to: FLFALSKQSHGLYIN*QYLPLRTNSIYWTF
Trigger: AAAGGTCCAATAAATGCTATTTGTTCTAAGTGGTAGATATTGCCAATTGATATAGAGCCCATGGCTTTGTTTAGACAGGGCAAAAAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS-3UTR CAA 90 bp AGAAACATGTGTGTATACATCCAAAGGCCTGAAAAATTCCCAAACAAGAATTCTATTAAAACTACCATCTaGGATCTTGGTGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: RNMCVYIQRPEKFPNKNSIKTTI*DLGAFQ
Trigger: TTGGAAAGCACCAAGATCCAAGATGGTAGTTTTAAT...AGAATTCTTGTTTGGGAATTTTTCAGGCCTTTGGATGTATACACACATGTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000615680.4
CDS GCA 72 bp CGCGGCGCCTCGGTTGCGGCCACTAGTGCAGGGATGTaGCTCGGCCCGTCCTCATTGAAATGCGGCGCTTCG +
Preference number: 6 (lower is better)
Translates to: RGASVAATSAGM*LGPSSLKCGAS
Trigger: CGAAGCGCCGCATTTCAATGAGGACGGGCCGAGGCACATCCCTGCACTAGTGGCCGCAACCGAGGCGCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS CAA 72 bp GCCACTAGTGCAGGGATGTGCCTCGGCCCGTCCTCATaGAAATGCGGCGCTTCGCACAGCCTCACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: ATSAGMCLGPSS*KCGASHSLTPA
Trigger: GGCTGGAGTGAGGCTGTGCGAAGCGCCGCATTTCAATGAGGACGGGCCGAGGCACATCCCTGCACTAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS CAA 90 bp TCGGTTGCGGCCACTAGTGCAGGGATGTGCCTCGGCCCGTCCTCATaGAAATGCGGCGCTTCGCACAGCCTCACTCCAGCCTCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: SVAATSAGMCLGPSS*KCGASHSLTPASLS
Trigger: GGAGAGAGAGGCTGGAGTGAGGCTGTGCGAAGCGCCGCATTTCAATGAGGACGGGCCGAGGCACATCCCTGCACTAGTGGCCGCAACCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS TCA 72 bp CCACTAGTGCAGGGATGTGCCTCGGCCCGTCCTCATTaGAATGCGGCGCTTCGCACAGCCTCACTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: PLVQGCASARPH*NAALRTASLQP
Trigger: AGGCTGGAGTGAGGCTGTGCGAAGCGCCGCATTTCAATGAGGACGGGCCGAGGCACATCCCTGCACTAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360631.8
CDS CAA 72 bp GGGGTTCCATTAACTGAGCTGGTGGAGGCAGGGGACTaGCTACGCCTGGACGGTCCTGGGCTCTTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GVPLTELVEAGD*LRLDGPGLLVV
Trigger: CACCACCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCCCTGCCTCCACCAGCTCAGTTAATGGAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS CAA 90 bp TCGGGAGGAGCTGGCTGCGCCTTGTACCGGCTCCTCACATCCTGGTaGCGTCTTCGTCGGAAAACCTGCCTCTCCTTATCAAGAGCGGTG +
Preference number: 6 (lower is better)
Translates to: SGGAGCALYRLLTSW*RLRRKTCLSLSRAV
Trigger: CACCGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS TCA 72 bp GGGCTTGGCGACTTGCCTGAGCGCGGAGTAGAGAGCTaGCTACCAGGGGTTCCATTAACTGAGCTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: GLGDLPERGVES*LPGVPLTELVE
Trigger: CTCCACCAGCTCAGTTAATGGAACCCCTGGTAGTCAGCTCTCTACTCCGCGCTCAGGCAAGTCGCCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS GCA 72 bp TCTTCCGATTCCGAGTTGAGTTCGGGAGGAGCTGGCTaGGCCTTGTACCGGCTCCTCACATCCTGGTTGCGT +
Preference number: 6 (lower is better)
Translates to: SSDSELSSGGAG*ALYRLLTSWLR
Trigger: ACGCAACCAGGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CCA 72 bp CAGGGGACTTGCTACGCCTGGACGGTCCTGGGCTCTTaGTGGTGCTCCTGCGGGATGATGAAGCTATTTTGG +
Preference number: 6 (lower is better)
Translates to: QGTCYAWTVLGS*WCSCGMMKLFW
Trigger: CCAAAATAGCTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS CCA 72 bp GGAGCTGGCTGCGCCTTGTACCGGCTCCTCACATCCTaGTTGCGTCTTCGTCGGAAAACCTGCCTCTCCTTA +
Preference number: 6 (lower is better)
Translates to: GAGCALYRLLTS*LRLRRKTCLSL
Trigger: TAAGGAGAGGCAGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 72 bp GCAGGGGACTTGCTACGCCTGGACGGTCCTGGGCTCTaGGTGGTGCTCCTGCGGGATGATGAAGCTATTTTG +
Preference number: 6 (lower is better)
Translates to: AGDLLRLDGPGL*VVLLRDDEAIL
Trigger: CAAAATAGCTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS CAA 72 bp CCAGGGCCATCGTTCTCATCCATCGAGCTGCAGACTTaGGTGGACGCAAGTGACGTAGAGGAGCCGCCATGC +
Preference number: 6 (lower is better)
Translates to: PGPSFSSIELQT*VDASDVEEPPC
Trigger: GCATGGCGGCTCCTCTACGTCACTTGCGTCCACCAAAGTCTGCAGCTCGATGGATGAGAACGATGGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 72 bp GATTCCGAGTTGAGTTCGGGAGGAGCTGGCTGCGCCTaGTACCGGCTCCTCACATCCTGGTTGCGTCTTCGT +
Preference number: 6 (lower is better)
Translates to: DSELSSGGAGCA*YRLLTSWLRLR
Trigger: ACGAAGACGCAACCAGGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTCAACTCGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS TCA 72 bp CGAAGTGCTCCAGCTCCATGTCTCTGCCGAAGGACATaGTGGACTTCAAGTAGGACCGGTCCGCGGAGAGAC +
Preference number: 6 (lower is better)
Translates to: RSAPAPCLCRRT*WTSSRTGPRRD
Trigger: GTCTCTCCGCGGACCGGTCCTACTTGAAGTCCATCATGTCCTTCGGCAGAGACATGGAGCTGGAGCACTTCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS TCA 72 bp CTCATCCATCGAGCTGCAGACTTTGGTGGACGCAAGTaGCGTAGAGGAGCCGCCATGCTGAGAGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LIHRAADFGGRK*RRGAAMLRAPL
Trigger: CAGAGGAGCTCTCAGCATGGCGGCTCCTCTACGTCACTTGCGTCCACCAAAGTCTGCAGCTCGATGGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS GCA 72 bp CGGCTGTATCTCTGCGCCTTATCCCGCTCGTCGAAGTaGTCCAGCTCCATGTCTCTGCCGAAGGACATGATG +
Preference number: 6 (lower is better)
Translates to: RLYLCALSRSSK*SSSMSLPKDMM
Trigger: CATCATGTCCTTCGGCAGAGACATGGAGCTGGAGCACTTCGACGAGCGGGATAAGGCGCAGAGATACAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS CCA 72 bp TATTCTCTCGCACCTCTGAAGGGCTTCCTTTGGCAGTaGCCAGTGAAGACACTGCCCGAGAAGCCGAGGTGG +
Preference number: 6 (lower is better)
Translates to: YSLAPLKGFLWQ*PVKTLPEKPRW
Trigger: CCACCTCGGCTTCTCGGGCAGTGTCTTCACTGGCCACTGCCAAAGGAAGCCCTTCAGAGGTGCGAGAGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS CCA 72 bp GGGACTTGCTACGCCTGGACGGTCCTGGGCTCTTGGTaGTGCTCCTGCGGGATGATGAAGCTATTTTGGTGT +
Preference number: 6 (lower is better)
Translates to: GTCYAWTVLGSW*CSCGMMKLFWC
Trigger: ACACCAAAATAGCTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS CCA 72 bp GTAGTCTTCCGATTCCGAGTTGAGTTCGGGAGGAGCTaGCTGCGCCTTGTACCGGCTCCTCACATCCTGGTT +
Preference number: 6 (lower is better)
Translates to: VVFRFRVEFGRS*LRLVPAPHILV
Trigger: AACCAGGATGTGAGGAGCCGGTACAAGGCGCAGCCAGCTCCTCCCGAACTCAACTCGGAATCGGAAGACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 72 bp GCTGGCTGCGCCTTGTACCGGCTCCTCACATCCTGGTaGCGTCTTCGTCGGAAAACCTGCCTCTCCTTATCA +
Preference number: 6 (lower is better)
Translates to: AGCALYRLLTSW*RLRRKTCLSLS
Trigger: TGATAAGGAGAGGCAGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCGGTACAAGGCGCAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 90 bp GGCCGAATGAAATCCTTATTCTCTCGCACCTCTGAAGGGCTTCCTTaGGCAGTGGCCAGTGAAGACACTGCCCGAGAAGCCGAGGTGGTC +
Preference number: 6 (lower is better)
Translates to: GRMKSLFSRTSEGLP*AVASEDTAREAEVV
Trigger: GACCACCTCGGCTTCTCGGGCAGTGTCTTCACTGGCCACTGCCAAAGGAAGCCCTTCAGAGGTGCGAGAGAATAAGGATTTCATTCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS GCA 72 bp CTGGCTGCGCCTTGTACCGGCTCCTCACATCCTGGTTaGGTCTTCGTCGGAAAACCTGCCTCTCCTTATCAA +
Preference number: 6 (lower is better)
Translates to: LAAPCTGSSHPG*VFVGKPASPYQ
Trigger: TTGATAAGGAGAGGCAGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAGCCGGTACAAGGCGCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS GCA 72 bp TACGCCTGGACGGTCCTGGGCTCTTGGTGGTGCTCCTaGGGGATGATGAAGCTATTTTGGTGTAAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: YAWTVLGSWWCS*GMMKLFWCKKW
Trigger: CCACTTCTTACACCAAAATAGCTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS GCA 72 bp ACTTGCTACGCCTGGACGGTCCTGGGCTCTTGGTGGTaGTCCTGCGGGATGATGAAGCTATTTTGGTGTAAG +
Preference number: 6 (lower is better)
Translates to: TCYAWTVLGSWW*SCGMMKLFWCK
Trigger: CTTACACCAAAATAGCTTCATCATCCCGCAGGAGCACCACCAAGAGCCCAGGACCGTCCAGGCGTAGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS TCA 72 bp GGGCTTGGCGACTTGCCTGAGCGCGGAGTAGAGAGCTaGCTACCAGGGGTTCCATTAACTTCTATGAGTTCT +
Preference number: 6 (lower is better)
Translates to: GLGDLPERGVES*LPGVPLTSMSS
Trigger: AGAACTCATAGAAGTTAATGGAACCCCTGGTAGTCAGCTCTCTACTCCGCGCTCAGGCAAGTCGCCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379893.5
ENST00000460982.1
ENST00000615680.4
CDS CCA 72 bp GCACTAAGCCAAGCACCCGCGGAAATGGGAATCGGTTaGATGAGTTTAAGGATGGCTAAGGCTGCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: ALSQAPAEMGIG*MSLRMAKAAPR
Trigger: TCTGGGAGCAGCCTTAGCCATCCTTAAACTCATCCAACCGATTCCCATTTCCGCGGGTGCTTGGCTTAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460982.1
ENST00000615680.4
CDS CAA 90 bp CCGTCTACAATGGTGGCCAGTCCAAAGTCACCCAGCTTCAGTGATTaGCTGCCATCTTGGTGCTCATACACCAGCAGGTTCTCTGGCTTG +
Preference number: 6 (lower is better)
Translates to: PSTMVASPKSPSFSD*LPSWCSYTSRFSGL
Trigger: CAAGCCAGAGAACCTGCTGGTGTATGAGCACCAAGATGGCAGCAAATCACTGAAGCTGGGTGACTTTGGACTGGCCACCATTGTAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 90 bp TGCAGGTTCTGTCTTAGGCTACATCAAAGGTGTCAATTAAGCCTCTaGCCAACAGCAACCCCCATCCCGACACCACTCCCTTCCGGAAGC +
Preference number: 6 (lower is better)
Translates to: CRFCLRLHQRCQLSL*PTATPIPTPLPSGS
Trigger: GCTTCCGGAAGGGAGTGGTGTCGGGATGGGGGTTGCTGTTGGCAAGAGGCTTAATTGACACCTTTGATGTAGCCTAAGACAGAACCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615680.4
CDS TCA 72 bp TATCACGGTGGACGATGTTCAGGCTATGCAGGTATTTaGTGGCGCTGGCTAGGTTGTACAGCATCCCACTGG +
Preference number: 6 (lower is better)
Translates to: YHGGRCSGYAGI*WRWLGCTASHW
Trigger: CCAGTGGGATGCTGTACAACCTAGCCAGCGCCATCAAATACCTGCATAGCCTGAACATCGTCCACCGTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS GCA 72 bp TGGCCAGTCCAAAGTCACCCAGCTTCAGTGATTTGCTaGCATCTTGGTGCTCATACACCAGCAGGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: WPVQSHPASVIC*HLGAHTPAGSL
Trigger: CAGAGAACCTGCTGGTGTATGAGCACCAAGATGGCAGCAAATCACTGAAGCTGGGTGACTTTGGACTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS GCA 72 bp TGGTGGCCAGTCCAAAGTCACCCAGCTTCAGTGATTTaGTGCCATCTTGGTGCTCATACACCAGCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: WWPVQSHPASVI*CHLGAHTPAGS
Trigger: AGAACCTGCTGGTGTATGAGCACCAAGATGGCAGCAAATCACTGAAGCTGGGTGACTTTGGACTGGCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS GCA 72 bp AAACCCGTGGTCCAGTGCTATGACAGAAACTCCAGCTaGTGTGCTATTCGGCTTGGGGCCTGTGTTGAAATG +
Preference number: 6 (lower is better)
Translates to: KPVVQCYDRNSS*CAIRLGACVEM
Trigger: CATTTCAACACAGGCCCCAAGCCGAATAGCACAGCAGCTGGAGTTTCTGTCATAGCACTGGACCACGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000477664.1
ENST00000615680.4
CDS GCA 72 bp CTCCTCACATCCTGGTTGCGTCTTCGTCGGAAAACCTaGCTCTCCTTATCAAGAGCGGTGGTTGCTATGACA +
Preference number: 6 (lower is better)
Translates to: LLTSWLRLRRKT*LSLSRAVVAMT
Trigger: TGTCATAGCAACCACCGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000379893.5
CDS CAA 72 bp CGTGGCTTCACGCCACTTCTGATGATGGTGACCAGCTaGGGCCGAATGAAATCCTTATTCTCTCGCACCTCT +
Preference number: 6 (lower is better)
Translates to: RGFTPLLMMVTS*GRMKSLFSRTS
Trigger: AGAGGTGCGAGAGAATAAGGATTTCATTCGGCCCAAGCTGGTCACCATCATCAGAAGTGGCGTGAAGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379892.4
CDS CAA 72 bp TTCAGGCTATGCAGGTATTTGATGGCGCTGGCTAGGTaGTACAGCATCCCACTGGCGTCTCTCTCGGTGTAT +
Preference number: 6 (lower is better)
Translates to: FRLCRYLMALAR*YSIPLASLSVY
Trigger: ATACACCGAGAGAGACGCCAGTGGGATGCTGTACAACCTAGCCAGCGCCATCAAATACCTGCATAGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 90 bp TGGACGATGTTCAGGCTATGCAGGTATTTGATGGCGCTGGCTAGGTaGTACAGCATCCCACTGGCGTCTCTCTCGGTGTATTTGTTAGTG +
Preference number: 6 (lower is better)
Translates to: WTMFRLCRYLMALAR*YSIPLASLSVYLLV
Trigger: CACTAACAAATACACCGAGAGAGACGCCAGTGGGATGCTGTACAACCTAGCCAGCGCCATCAAATACCTGCATAGCCTGAACATCGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS GCA 72 bp TCTGGCTTGATATCACGGTGGACGATGTTCAGGCTATaGAGGTATTTGATGGCGCTGGCTAGGTTGTACAGC +
Preference number: 6 (lower is better)
Translates to: SGLISRWTMFRL*RYLMALARLYS
Trigger: GCTGTACAACCTAGCCAGCGCCATCAAATACCTGCATAGCCTGAACATCGTCCACCGTGATATCAAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS GCA 72 bp CTCCTCACATCCTGGTTGCGTCTTCGTCGGAAAACCTaGCTCTCCTTATCAAGAGCGGTGGTCTTATCCAAT +
Preference number: 6 (lower is better)
Translates to: LLTSWLRLRRKT*LSLSRAVVLSN
Trigger: ATTGGATAAGACCACCGCTCTTGATAAGGAGAGGCAGGTTTTCCGACGAAGACGCAACCAGGATGTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255448.8
ENST00000615680.4
CDS GCA 72 bp ATCAAGAGCGGTGGTTGCTATGACAGAAACTCCAGCTaGTGTGCTATTCGGCTTGGGGCCTGTGTTGAAATG +
Preference number: 6 (lower is better)
Translates to: IKSGGCYDRNSS*CAIRLGACVEM
Trigger: CATTTCAACACAGGCCCCAAGCCGAATAGCACAGCAGCTGGAGTTTCTGTCATAGCAACCACCGCTCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360631.8
ENST00000379893.5
CDS CAA 72 bp ATATCACGGTGGACGATGTTCAGGCTATGCAGGTATTaGATGGCGCTGGCTAGGTTGTACAGCATCCCACTG +
Preference number: 6 (lower is better)
Translates to: ISRWTMFRLCRY*MALARLYSIPL
Trigger: CAGTGGGATGCTGTACAACCTAGCCAGCGCCATCAAATACCTGCATAGCCTGAACATCGTCCACCGTGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 72 bp TGTCTTAGGCTACATCAAAGGTGTCAATTAAGCCTCTaGCCAACAGCAACCCCCATCCCGACACCACTCCCT +
Preference number: 6 (lower is better)
Translates to: CLRLHQRCQLSL*PTATPIPTPLP
Trigger: AGGGAGTGGTGTCGGGATGGGGGTTGCTGTTGGCAAGAGGCTTAATTGACACCTTTGATGTAGCCTAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615680.4
CDS CAA 90 bp TGGTCCAGTGCTATGACAGAAACTCCAGCTGCTGTGCTATTCGGCTaGGGGCCTGTGTTGAAATGCTTCTTTATCTTTCCAGCTACTGAC +
Preference number: 6 (lower is better)
Translates to: WSSAMTETPAAVLFG*GPVLKCFFIFPATD
Trigger: GTCAGTAGCTGGAAAGATAAAGAAGCATTTCAACACAGGCCCCAAGCCGAATAGCACAGCAGCTGGAGTTTCTGTCATAGCACTGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000477664.1
ENST00000615680.4
CDS CCA 72 bp CCGACTTTATATCGTTCTGTTATTGTAGCTGGAATCTaGAAGCCTTCCTCCGACACTTCTTCTCCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: PTLYRSVIVAGI*KPSSDTSSPGP
Trigger: TGGCCCTGGAGAAGAAGTGTCGGAGGAAGGCTTCCAGATTCCAGCTACAATAACAGAACGATATAAAGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS TCA 72 bp ATACATTCCTGGTTGCTGGTAGTAGTCCAAAGACCCTaGTCTCTTGATGGTAAACCCGTGGTCCAGTGCTAT +
Preference number: 6 (lower is better)
Translates to: IHSWLLVVVQRP*SLDGKPVVQCY
Trigger: ATAGCACTGGACCACGGGTTTACCATCAAGAGATCAGGGTCTTTGGACTACTACCAGCAACCAGGAATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255448.8
ENST00000477664.1
ENST00000615680.4
CDS TCA 72 bp AGACTGCCAGCACGTTGCCATGGAAACACTGACTGTTaGGCTGCACCATCTCATACCTTATCCAATACATTC +
Preference number: 6 (lower is better)
Translates to: RLPARCHGNTDC*AAPSHTLSNTF
Trigger: GAATGTATTGGATAAGGTATGAGATGGTGCAGCTCAACAGTCAGTGTTTCCATGGCAACGTGCTGGCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477664.1
CDS TCA 72 bp TTAATGGAGACTGCCAGCACGTTGCCATGGAAACACTaGCTGTTGAGCTGCACCATCTCATACCTTATCCAA +
Preference number: 6 (lower is better)
Translates to: LMETASTLPWKH*LLSCTISYLIQ
Trigger: TTGGATAAGGTATGAGATGGTGCAGCTCAACAGTCAGTGTTTCCATGGCAACGTGCTGGCAGTCTCCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477664.1
CDS CCA 72 bp GAGCTCCTTTGCAGAATCGGAAACATTATCCCAGTATaGAGAAGGAAAGTCCACCTGCCCCATCAAAATCTG +
Preference number: 6 (lower is better)
Translates to: ELLCRIGNIIPV*RRKVHLPHQNL
Trigger: CAGATTTTGATGGGGCAGGTGGACTTTCCTTCTCCATACTGGGATAATGTTTCCGATTCTGCAAAGGAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000486239.1
ENST00000615680.4
CDS CAA 72 bp TTGTACAGCATCCCACTGGCGTCTCTCTCGGTGTATTaGTTAGTGGAAGTAATGGCATCAAAAAGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: LYSIPLASLSVY*LVEVMASKRSP
Trigger: GGGAGACCTTTTTGATGCCATTACTTCCACTAACAAATACACCGAGAGAGACGCCAGTGGGATGCTGTACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 72 bp ACTTCTATGAGTTCTAACATGGACACAGTCTTAGTGTaGGACCTGAATACCAACGGCGGAATCCCGTCTCAG +
Preference number: 6 (lower is better)
Translates to: TSMSSNMDTVLV*DLNTNGGIPSQ
Trigger: CTGAGACGGGATTCCGCCGTTGGTATTCAGGTCCAACACTAAGACTGTGTCCATGTTAGAACTCATAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379893.5
ENST00000460982.1
ENST00000615680.4
CDS CAA 72 bp GAGGCCATCATCATTAACCCAGGGATGCTCAAGTACTaGAACAGCAGAAAATCGCTGATCTACATCGACCAA +
Preference number: 6 (lower is better)
Translates to: EAIIINPGMLKY*NSRKSLIYIDQ
Trigger: TTGGTCGATGTAGATCAGCGATTTTCTGCTGTTCAAGTACTTGAGCATCCCTGGGTTAATGATGATGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 90 bp ATTTTCTGGGAGGCCATCATCATTAACCCAGGGATGCTCAAGTACTaGAACAGCAGAAAATCGCTGATCTACATCGACCAACAGCATCAT +
Preference number: 6 (lower is better)
Translates to: IFWEAIIINPGMLKY*NSRKSLIYIDQQHH
Trigger: ATGATGCTGTTGGTCGATGTAGATCAGCGATTTTCTGCTGTTCAAGTACTTGAGCATCCCTGGGTTAATGATGATGGCCTCCCAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 90 bp GAAATGGTGCGAGTCACTTACATTAACCCAGGGATGCTCAAGTACTaGAACAGCAGAAAATCGCTGATCTACATCGACCAACAGCATCAT +
Preference number: 6 (lower is better)
Translates to: EMVRVTYINPGMLKY*NSRKSLIYIDQQHH
Trigger: ATGATGCTGTTGGTCGATGTAGATCAGCGATTTTCTGCTGTTCAAGTACTTGAGCATCCCTGGGTTAATGTAAGTGACTCGCACCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486239.1
CDS CCA 72 bp TGTTCTTCCGACTTTATATCGTTCTGTTATTGTAGCTaGAATCTGGAAGCCTTCCTCCGACACTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: CSSDFISFCYCS*NLEAFLRHFFS
Trigger: GGAGAAGAAGTGTCGGAGGAAGGCTTCCAGATTCCAGCTACAATAACAGAACGATATAAAGTCGGAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255448.8
ENST00000360631.8
ENST00000379893.5
ENST00000615680.4
CDS CAA 72 bp CGAGTCACTTACATTAACCCAGGGATGCTCAAGTACTaGAACAGCAGAAAATCGCTGATCTACATCGACCAA +
Preference number: 6 (lower is better)
Translates to: RVTYINPGMLKY*NSRKSLIYIDQ
Trigger: TTGGTCGATGTAGATCAGCGATTTTCTGCTGTTCAAGTACTTGAGCATCCCTGGGTTAATGTAAGTGACTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486239.1
CDS CCA 72 bp ATGCTGTGGAAAGCACTTCCCTTGGAACTGCTTGAATaGAAAGTTGGCCATGATATCTATCGGCAATTAGTA +
Preference number: 6 (lower is better)
Translates to: MLWKALPLELLE*KVGHDIYRQLV
Trigger: TACTAATTGCCGATAGATATCATGGCCAACTTTCCATTCAAGCAGTTCCAAGGGAAGTGCTTTCCACAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS CCA 72 bp AGAGCCCAATCATGTATAGATCTTCAGGGCATGTGTTaGAAATTCCCCGGCTGGTTATGTAGGGTATATATA +
Preference number: 6 (lower is better)
Translates to: RAQSCIDLQGMC*KFPGWLCRVYI
Trigger: TATATATACCCTACATAACCAGCCGGGGAATTTCCAACACATGCCCTGAAGATCTATACATGATTGGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS TCA 72 bp GTTCTTTCAAGATGGAATGTTTCAGTTTGCAGCTCTTaGATAACCTGCCAGAGAAGTGTCTTTCTCTCCAAC +
Preference number: 6 (lower is better)
Translates to: VLSRWNVSVCSS*ITCQRSVFLSN
Trigger: GTTGGAGAGAAAGACACTTCTCTGGCAGGTTATTCAAGAGCTGCAAACTGAAACATTCCATCTTGAAAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS TCA 72 bp GATGAGCCAATATATGCGCACAGGGATGTATACAGATaGGAGAACCTGACACTTCTTAAAATTCTATGGCAG +
Preference number: 6 (lower is better)
Translates to: DEPIYAHRDVYR*ENLTLLKILWQ
Trigger: CTGCCATAGAATTTTAAGAAGTGTCAGGTTCTCTCATCTGTATACATCCCTGTGCGCATATATTGGCTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS CCA 72 bp GTTCAAGAGATTAAATGCTGTGGAAAGCACTTCCCTTaGAACTGCTTGAATGGAAAGTTGGCCATGATATCT +
Preference number: 6 (lower is better)
Translates to: VQEIKCCGKHFP*NCLNGKLAMIS
Trigger: AGATATCATGGCCAACTTTCCATTCAAGCAGTTCCAAGGGAAGTGCTTTCCACAGCATTTAATCTCTTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS CAA 72 bp ACACCAGCAAGATTGAGAATTTTTCAGAGTGGAGATTaGGATACTCTGGGCCTGATTTATACAGCACCATTT +
Preference number: 6 (lower is better)
Translates to: TPARLRIFQSGD*DTLGLIYTAPF
Trigger: AAATGGTGCTGTATAAATCAGGCCCAGAGTATCCAAATCTCCACTCTGAAAAATTCTCAATCTTGCTGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS CAA 72 bp TGTTCTTTCAAGATGGAATGTTTCAGTTTGCAGCTCTaGAATAACCTGCCAGAGAAGTGTCTTTCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: CSFKMECFSLQL*NNLPEKCLSLQ
Trigger: TTGGAGAGAAAGACACTTCTCTGGCAGGTTATTCAAGAGCTGCAAACTGAAACATTCCATCTTGAAAGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS CCA 72 bp ATAGATCTTCAGGGCATGTGTTGGAAATTCCCCGGCTaGTTATGTAGGGTATATATATATATAGTACATCAG +
Preference number: 6 (lower is better)
Translates to: IDLQGMCWKFPG*LCRVYIYIVHQ
Trigger: CTGATGTACTATATATATATATACCCTACATAACCAGCCGGGGAATTTCCAACACATGCCCTGAAGATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS CAA 90 bp ACAGGTATTATTATGAACTGTTCTTTCAAGATGGAATGTTTCAGTTaGCAGCTCTTGAATAACCTGCCAGAGAAGTGTCTTTCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: TGIIMNCSFKMECFS*QLLNNLPEKCLSLQ
Trigger: TTGGAGAGAAAGACACTTCTCTGGCAGGTTATTCAAGAGCTGCAAACTGAAACATTCCATCTTGAAAGAACAGTTCATAATAATACCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS CAA 90 bp TATTTTTCACACTATGCCTCTGTGCAATATTTCAATCAAAGACAGTaGTCACTAACATGCACAAATAGAGATGCTAGCAAGGTTAATGCA +
Preference number: 6 (lower is better)
Translates to: YFSHYASVQYFNQRQ*SLTCTNRDASKVNA
Trigger: TGCATTAACCTTGCTAGCATCTCTATTTGTGCATGTTAGTGACAACTGTCTTTGATTGAAATATTGCACAGAGGCATAGTGTGAAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460982.1
CDS TCA 72 bp GAATTTTTCAGAGTGGAGATTTGGATACTCTGGGCCTaGTTTATACAGCACCATTTAAGTGAATTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: EFFRVEIWILWA*FIQHHLSEFCF
Trigger: AAAGCAAAATTCACTTAAATGGTGCTGTATAAATCAGGCCCAGAGTATCCAAATCTCCACTCTGAAAAATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460982.1