RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCHS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000197410

Ensembl transcript IDs: ENST00000339452.2, ENST00000357232.10, ENST00000456341.2, ENST00000504580.1, ENST00000507542.2, ENST00000623568.1, ENST00000623607.4, ENST00000624983.1, ENST00000638365.1, ENST00000638949.2, ENST00000639062.3, ENST00000639512.1, ENST00000640089.1, ENST00000640328.1, ENST00000640742.1, ENST00000640896.1

Found 1340 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGTACTTGTTTaGTGGCATTGTGGCACTGGATACAGACTGATAAACCCATCAATT +
Preference number: 1 (lower is better)
Translates to: SVFTFLTPFPLVVLV*WHCGTGYRLINPSI
Trigger: AATTGATGGGTTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGGAATGGGGTTAAAAATGTGAACACGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR CCA 90 bp GTGTTCACATTTTTAACCCCATTCCCACTTGTAGTACTTGTTTGGTaGCATTGTGGCACTGGATACAGACTGATAAACCCATCAATTAAA +
Preference number: 1 (lower is better)
Translates to: VFTFLTPFPLVVLVW*HCGTGYRLINPSIK
Trigger: TTTAATTGATGGGTTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGGAATGGGGTTAAAAATGTGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR TCA 90 bp GATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTTaGATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGAT +
Preference number: 1 (lower is better)
Translates to: DSCHPSLYLSLQFIC*INWNLYPDIFHDLD
Trigger: ATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTATTCAACAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
3UTR-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAGGGATGAGAATCTGTaGGGGATTCCCAGGCTTATC +
Preference number: 2 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDRDENL*GIPRLI
Trigger: GATAAGCCTGGGAATCCCTCACAGATTCTCATCCCT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTTGTTCATTCATTCATaGCCAATGGTGAGCAGGTAC +
Preference number: 2 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALFIHS*PMVSRY
Trigger: GTACCTGCTCACCATTGGTCATGAATGAATGAACAA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTACAAATGTGAGTCCTaGGAGCAACACATAAGGATT +
Preference number: 2 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDYKCES*EQHIRI
Trigger: AATCCTTATGTGTTGCTCTCAGGACTCACATTTGTA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAAAGCTGCAAGTGTGTaGGCAAATGGTAAAAAGACT +
Preference number: 2 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAKAASV*ANGKKT
Trigger: AGTCTTTTTACCATTTGCTCACACACTTGCAGCTTT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCCAATCTCGAGTTGCTaGCTTGAAAACATTTTGTTC +
Preference number: 2 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAPISSC*LENILF
Trigger: GAACAAAATGTTTTCAAGCCAGCAACTCGAGATTGG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGTTCACTGTGTCCTTTaGAAGTCTAATCATACAGAC +
Preference number: 2 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDVHCVL*KSNHTD
Trigger: GTCTGTATGATTAGACTTCCAAAGGACACAGTGAAC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTACAGACAACAGGTCTaGCAGAATATACACTACTTA +
Preference number: 2 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAYRQQV*QNIHYL
Trigger: TAAGTAGTGTATATTCTGTCAGACCTGTTGTCTGTA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAAGGCTGGAAGAAATTaGAGAAACTTTAATGGGGAA +
Preference number: 2 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAKAGRN*RNFNGE
Trigger: TTCCCCATTAAAGTTTCTCCAATTTCTTCCAGCCTT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAAGGCTGGAAGAAATTaGAGAAACTTTAATGGGGAA +
Preference number: 2 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDKAGRN*RNFNGE
Trigger: TTCCCCATTAAAGTTTCTCCAATTTCTTCCAGCCTT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCCTCTATCAGGAACATaGATTTCTGGTTTATTGAAT +
Preference number: 2 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDPLSGT*ISGLLN
Trigger: ATTCAATAAACCAGAAATGCATGTTCCTGATAGAGG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCCTCTATCAGGAACATaGATTTCTGGTTTATTGAAT +
Preference number: 2 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAPLSGT*ISGLLN
Trigger: ATTCAATAAACCAGAAATGCATGTTCCTGATAGAGG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTAGAGCATTGTATGTaGGCACCATCTAGCACTGCT +
Preference number: 2 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLEHCM*APSSTA
Trigger: AGCAGTGCTAGATGGTGCTCACATACAATGCTCTAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR CAA 90 bp CAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGTACTTGTTaGGTGGCATTGTGGCACTGGATACAGACTGATAAACCCATCAAT +
Preference number: 2 (lower is better)
Translates to: QRVHIFNPIPTCSTC*VALWHWIQTDKPIN
Trigger: ATTGATGGGTTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGGGATGAGAATCTGTaGGGGATTCCCAGGCTTATC +
Preference number: 2 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRDENL*GIPRLI
Trigger: GATAAGCCTGGGAATCCCTCACAGATTCTCATCCCT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAGCCCAATCTCGAGTTaGTGGCTTGAAAACATTTTG +
Preference number: 2 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSPISS*WLENIL
Trigger: CAAAATGTTTTCAAGCCAGCAACTCGAGATTGGGCT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGTTCACTGTGTCCTTTaGAAGTCTAATCATACAGAC +
Preference number: 2 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKVHCVL*KSNHTD
Trigger: GTCTGTATGATTAGACTTCCAAAGGACACAGTGAAC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTAGAGCATTGTATGTaGGCACCATCTAGCACTGCT +
Preference number: 2 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILEHCM*APSSTA
Trigger: AGCAGTGCTAGATGGTGCTCACATACAATGCTCTAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTGCGAGTATCAATCCTaGCCCTCTATCAGGAACATG +
Preference number: 2 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSCEYQS*PSIRNM
Trigger: CATGTTCCTGATAGAGGGCCAGGATTGATACTCGCA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGTTTGGTGGCATTGTaGCACTGGATACAGACTGAT +
Preference number: 2 (lower is better)
Translates to: LKELTYDLLQTLNQRVHICLVAL*HWIQTD
Trigger: ATCAGTCTGTATCCAGTGCCACAATGCCACCAAACA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGTAGTACTTGTTTGGTaGCATTGTGGCACTGGATAC +
Preference number: 2 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIVVLVW*HCGTGY
Trigger: GTATCCAGTGCCACAATGCCACCAAACAAGTACTAC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTTGTAGTACTTGTTTaGTGGCATTGTGGCACTGGA +
Preference number: 2 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILVVLV*WHCGTG
Trigger: TCCAGTGCCACAATGCCACCAAACAAGTACTACAAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAGCCCAATCTCGAGTTaGTGGCTTGAAAACATTTTG +
Preference number: 2 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISPISS*WLENIL
Trigger: CAAAATGTTTTCAAGCCAGCAACTCGAGATTGGGCT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTTGTTCATTCATTCATaGCCAATGGTGAGCAGGTAC +
Preference number: 2 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLFIHS*PMVSRY
Trigger: GTACCTGCTCACCATTGGTCATGAATGAATGAACAA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTACAAATGTGAGTCCTaGGAGCAACACATAAGGATT +
Preference number: 2 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIYKCES*EQHIRI
Trigger: AATCCTTATGTGTTGCTCTCAGGACTCACATTTGTA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAAACCACATAAATATTaGGAGTATCAATCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIKPHKY*EYQSWP
Trigger: GGGCCAGGATTGATACTCGCAATATTTATGTGGTTT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTATGTTTTCCTTAAATTaGGAGGCAGATCTAGAGAAC +
Preference number: 2 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRMFSLN*EADLEN
Trigger: GTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACAT...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
3UTR-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCCAATCTCGAGTTGCTaGCTTGAAAACATTTTGTTC +
Preference number: 2 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSPISSC*LENILF
Trigger: GAACAAAATGTTTTCAAGCCAGCAACTCGAGATTGG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR TCA 72 bp GATGCTGTCCACCTTCCTGAAAGGGATGAGAATCTGTaGGGGATTCCCAGGCTTATCAGAAAGAAGGCTAGA +
Preference number: 3 (lower is better)
Translates to: DAVHLPERDENL*GIPRLIRKKAR
Trigger: TCTAGCCTTCTTTCTGATAAGCCTGGGAATCCCTCACAGATTCTCATCCCTTTCAGGAAGGTGGACAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CAA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTCCATGATCTAGATTaGCTGTTGCATCTCCAACGT +
Preference number: 3 (lower is better)
Translates to: LSRVHHLASTMISSWPILFHDLD*LLHLQR
Trigger: ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAA...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
3UTR CCA 72 bp TTTTTAACCCCATTCCCACTTGTAGTACTTGTTTGGTaGCATTGTGGCACTGGATACAGACTGATAAACCCA +
Preference number: 3 (lower is better)
Translates to: FLTPFPLVVLVW*HCGTGYRLINP
Trigger: TGGGTTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGGAATGGGGTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCTCGAGTTGCTGGCTaGAAAACATTTTGTTCATTC +
Preference number: 3 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSRVAG*KTFCSF
Trigger: GAATGAACAAAATGTTTTCAAGCCAGCAACTCGAGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTACTTGTTTGGTGGCATaGTGGCACTGGATACAGACT +
Preference number: 3 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCTCLVA*WHWIQT
Trigger: AGTCTGTATCCAGTGCCACAATGCCACCAAACAAGT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR CCA 72 bp ACATTTTTAACCCCATTCCCACTTGTAGTACTTGTTTaGTGGCATTGTGGCACTGGATACAGACTGATAAAC +
Preference number: 3 (lower is better)
Translates to: TFLTPFPLVVLV*WHCGTGYRLIN
Trigger: GTTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGGAATGGGGTTAAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGATCTAGATTTGCTGTaGCATCTCCAACGTGTAGCA +
Preference number: 3 (lower is better)
Translates to: SWPILFHLFPMYILRFSHDLDLL*HLQRVA
Trigger: TGCTACACGTTGGAGATGCAACAGCAAATCTAGATC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
3UTR-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTACTTGTTTGGTGGCATaGTGGCACTGGATACAGACT +
Preference number: 3 (lower is better)
Translates to: LKELTYDLLQTLNQRVHITCLVA*WHWIQT
Trigger: AGTCTGTATCCAGTGCCACAATGCCACCAAACAAGT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGATCTAGATTTGCTGTaGCATCTCCAACGTGTAGCA +
Preference number: 3 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSDLDLL*HLQRVA
Trigger: TGCTACACGTTGGAGATGCAACAGCAAATCTAGATC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
3UTR-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTTTCCATGATCTAGATTaGCTGTTGCATCTCCAACGT +
Preference number: 3 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSFHDLD*LLHLQR
Trigger: ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAA...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
3UTR-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTATAGCTTTATACATTaGTTCCCAATCTCAGTCAGC +
Preference number: 3 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCYSFIH*FPISVS
Trigger: GCTGACTGAGATTGGGAACAAATGTATAAAGCTATA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR TCA 72 bp TCTTTGCCCAGGAATCTGTTTTGGAAGCCAATTCAATaGTTACTACTAGGACATGGAATTTTGATATCCATT +
Preference number: 3 (lower is better)
Translates to: SLPRNLFWKPIQ*LLLGHGILISI
Trigger: AATGGATATCAAAATTCCATGTCCTAGTAGTAATCATTGAATTGGCTTCCAAAACAGATTCCTGGGCAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCGTCCTGGCGCCGCTaGTGCCTGACCGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDASWRR*CLTAHG
Trigger: CCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGACGC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCAGCGTCTCCTCCGTaGTCAGCGGCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAAASPP*SAAGTP
Trigger: CGGGGTCCCCGCCGCTGAGCACGGAGGAGACGCTGC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTGCAGGCTGGGGCGCTaGCGAGCTGCGCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDCRLGR*RAAPAP
Trigger: CGGTGCAGGCGCAGCTCGGCAGCGCCCCAGCCTGCA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAGCGTGAGCTCCCGCTaGTCGCCCGCGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSVSSR*SPAPRL
Trigger: CAGCCTGGGCGCGGGCGAGCAGCGGGAGCTCACGCT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGGCGCCGCTGCTGCCTaGCCGCCCATGGGGTGTATC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAGAAAA*PPMGCI
Trigger: GATACACCCCATGGGCGGTCAGGCAGCAGCGGCGCC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCGCCTGCACCGTaGGCACAACCACGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDAAPAP*AQPRAA
Trigger: CGCAGCCCGTGGTTGTGCTCACGGTGCAGGCGCAGC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTCCTGGCGCCGCTGCTaGCTGACCGCCCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASWRRC*LTAHGV
Trigger: CACCCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCAGAGCAGGGAGCGCTaGGTCCTGGCGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAQSRER*VLAPLL
Trigger: CAGCAGCGGCGCCAGGACGCAGCGCTCCCTGCTCTG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTCGATCTGCAGCCGGTaGGCCGCCGCCTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASICSR*AAASSR
Trigger: CCGAGAGGAGGCGGCGGCGCACCGGCTGCAGATCGA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTCCCATGCCTCGATCTaGAGCCGGTGCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASHASI*SRCAAA
Trigger: GGCGGCGGCGCACCGGCTGCAGATCGAGGCATGGGA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGGGGCGCTGCCGAGCTaGGCCTGCACCGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAGALPS*ACTVST
Trigger: TGTGCTCACGGTGCAGGCGCAGCTCGGCAGCGCCCC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCGGAAGGCGGTCCCTaGCGGGCTGAGCTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDAEGGP*RAELGD
Trigger: GTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCCAGGTCGCGGTCGGTaGCGCGCACGCGACAGACCT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAPGRGR*RARDRP
Trigger: AGGTCTGTCGCGTGCGCGCCACCGACCGCGACCTGG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTCGGCCGCCGTCCCATaGCTCGATCTGCAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSAAVP*LDLQPV
Trigger: CACCGGCTGCAGATCGAGGCATGGGACGGCGGCCGA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAGCGCACGAAGCCATTaGGCCCCAGGTCGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSARSH*APGRGR
Trigger: CCGACCGCGACCTGGGGCCCAATGGCTTCGTGCGCT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAGCGCACGAAGCCATTaGGCCCCAGGTCGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASARSH*APGRGR
Trigger: CCGACCGCGACCTGGGGCCCAATGGCTTCGTGCGCT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTGGACACGCGCACCGTaGCAACCTCAGGCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDWTRAP*QPQARR
Trigger: GCGCCGAGCCTGAGGTTGCCACGGTGCGCGTGTCCA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGTGCCCAGCCGCGGGTaGATGGAGAACTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDVPSRG*MENFPP
Trigger: CGGCGGAAAGTTCTCCATTCACCCGCGGCTGGGCAC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGTGCCCAGCCGCGGGTaGATGGAGAACTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAVPSRG*MENFPP
Trigger: CGGCGGAAAGTTCTCCATTCACCCGCGGCTGGGCAC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTGGTGCCAGGCCTGTaGCTCGCGGTCCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALVPGL*LAVQRS
Trigger: AGACCTCTGGACCGCGAGGCACAGGCCTGGCACCAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGCGTGATCACTGCCTaGCTCGTCGGCATCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGVITA*LVGIGG
Trigger: GCCTCCGATGCCGACGAGGCAGGCAGTGATCACGCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTGCCGAGCTGCGCCTaGACCGTGAGCACAACCACG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALPSCA*TVSTTT
Trigger: CGTGGTTGTGCTCACGGTGCAGGCGCAGCTCGGCAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGTGTCCGGGTGCACGTaGAAGTCGTCCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDVSGCT*KSSSSG
Trigger: CCCGCTGCTGGACGACTTCCACGTGCACCCGGACAC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCAGCGCCCAGCAGCGTaGCGGCGACGAAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAQRPAA*RRRSCS
Trigger: ACTACAGCTTCGTCGCCGCCACGCTGCTGGGCGCTG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCGTCCAGCACGGCGATaGACACGCGCACCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDARPARR*TRAPWQ
Trigger: TTGCCACGGTGCGCGTGTCCATCGCCGTGCTGGACG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCAGGTGGCAGAGAGTaGGGGCTCTCCGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDAGGRE*GLSEVL
Trigger: CAGGACCTCGGAGAGCCCCCACTCTCTGCCACCTGC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCAGGAGAGCTGGTCTaGGTCCCTCGGGATACCCGA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAAGELV*VPRDTR
Trigger: TCGGGTATCCCGAGGGACTCAGACCAGCTCTCCTGC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCCCACAGCCACACGTaGACCAAGAGCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAAHSHT*TKSQSR
Trigger: CCTGCTCTGGCTCTTGGTGCACGTGTGGCTGTGGGC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTATGCCGGTGTCCGGGTaGACGTGGAAGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAMPVSG*TWKSSS
Trigger: GCTGGACGACTTCCACGTGCACCCGGACACCGGCAT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATATGCCGGTGTCCGGGTaGACGTGGAAGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDMPVSG*TWKSSS
Trigger: GCTGGACGACTTCCACGTGCACCCGGACACCGGCAT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTACGCGAATCTCCACCTaGACCACAGCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDATRIST*TTAPSS
Trigger: GCTGCTGGGCGCTGTGGTGCAGGTGGAGATTCGCGT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCGCGGTACTCGTCCTaGTCAAAGACCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAARYSS*SKTGGL
Trigger: CAACCCGCCGGTCTTTGAGCAGGACGAGTACCGCGC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTCATGGTGCCCCCGGTaGTCACGATCCAGTGCCACC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSWCPR*SRSSAT
Trigger: GGTGGCACTGGATCGTGAGCACCGGGGGCACCATGA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTGCCTGACCGCCCATaGGGTGTATCTCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALPDRP*GVSLLP
Trigger: CGGGAGGAGAGATACACCCCATGGGCGGTCAGGCAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGCTCTCCGAGGTCCTaGGCCACCACTTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGSPRS*ATTFSS
Trigger: GGAGCTGAAAGTGGTGGCCCAGGACCTCGGAGAGCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGATGGCAAAGACGCCTaGCTGCGGGCTGGCGATGGA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDADGKDA*LRAGDG
Trigger: TCCATCGCCAGCCCGCAGCCAGGCGTCTTTGCCATC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGATGGCAAAGACGCCTaGCTGCGGGCTGGCGATGGA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDDGKDA*LRAGDG
Trigger: TCCATCGCCAGCCCGCAGCCAGGCGTCTTTGCCATC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATACGCTGGGGGCCAAGTaGGTGCGCCTGTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDTLGAK*VRLCLQ
Trigger: CTGCAAACACAGGCGCACCCACTTGGCCCCCAGCGT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCATGGTGGCGTTTCGTaGTGGGGAGCCGCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAHGGVS*WGAAVC
Trigger: ACAGACCGCGGCTCCCCACCACGAAACGCCACCATG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCGGGATACCCGAGTCTaGCACCCTGGACTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDARDTRV*HPGLVV
Trigger: GACCACGAGTCCAGGGTGCCAGACTCGGGTATCCCG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGGGATGGGAGAGCGTaGGTGTTTCGGAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGDGRA*VFRRHL
Trigger: CAGGTGCCTCCGAAACACCCACGCTCTCCCATCCCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCGCGGCCTCGGACACTaGGGCCTTGTAATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDRGLGH*GLVMLL
Trigger: CAACAGCATTACAAGGCCTCAGTGTCCGAGGCCGCG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGAAGTAAGCTCTAGCTaGCTCTGCCGCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDEVSSS*LCRGSH
Trigger: GTGGCTGCCGCGGCAGAGGCAGCTAGAGCTTACTTC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCAGGGAGCCGAGATTaGAGGGAGCCGAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDAGSRD*REPRVG
Trigger: TCCAACTCTCGGCTCCCTGCAATCTCGGCTCCCTGC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGTGAGGTTGAACAACTaGGCAGAGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDVRLNN*AEEPEA
Trigger: GGCCTCGGGCTCCTCTGCCCAGTTGTTCAACCTCAC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGGACCCCGCGTCCGTaGCCACCAGTAGTAACTCAT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGTPRP*PPVVTH
Trigger: ATGAGTTACTACTGGTGGCCACGGACGCGGGGTCCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAGCTCCACCGCCTCCTaGACCTCTCGGTCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASSTAS*TSRSRV
Trigger: GACTCTAGACCGAGAGGTCCAGGAGGCGGTGGAGCT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGACCCGTGGTTGTCCTaGCTGGAATGCCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDDPWLS*LECPGL
Trigger: CAGACCAGGGCATTCCAGCCAGGACAACCACGGGTC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCCGAGTCTGGCACCCTaGACTCGTGGTCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDPSLAP*TRGHSE
Trigger: CTCTGAGTGACCACGAGTCCAGGGTGCCAGACTCGG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGAGGTGGTTGGTCATTaGGGTCAGCGACCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDEVVGH*GQRPGV
Trigger: TACTCCGGGTCGCTGACCTCAATGACCAACCACCTC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGAGGTGGTTGGTCATTaGGGTCAGCGACCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAEVVGH*GQRPGV
Trigger: TACTCCGGGTCGCTGACCTCAATGACCAACCACCTC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATACCTGGCCCTCATGCTaGCCACAGGAAGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDTWPSC*PQEEDF
Trigger: GAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAGGT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGCAGCGTCTCCTCCGTaGTCAGCGGCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLAASPP*SAAGTP
Trigger: CGGGGTCCCCGCCGCTGAGCACGGAGGAGACGCTGC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGCAGCGTCTCCTCCGTaGTCAGCGGCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKAASPP*SAAGTP
Trigger: CGGGGTCCCCGCCGCTGAGCACGGAGGAGACGCTGC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATGCAGGCTGGGGCGCTaGCGAGCTGCGCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKCRLGR*RAAPAP
Trigger: CGGTGCAGGCGCAGCTCGGCAGCGCCCCAGCCTGCA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTCTGTCTTCCGCACGTaGGAGGTACAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSVFRT*EVQGCA
Trigger: GGCACAGCCTTGTACCTCGCACGTGCGGAAGACAGA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGCGTGAGCTCCCGCTaGTCGCCCGCGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLSVSSR*SPAPRL
Trigger: CAGCCTGGGCGCGGGCGAGCAGCGGGAGCTCACGCT...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAGCGTGAGCTCCCGCTaGTCGCCCGCGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSVSSR*SPAPRL
Trigger: CAGCCTGGGCGCGGGCGAGCAGCGGGAGCTCACGCT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTACAGTCATCTCATGGTaGCCCCGGTGCTCACGATCC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDATVISW*PRCSRS
Trigger: GGATCGTGAGCACCGGGGGCACCATGAGATGACTGT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCCCAGGCTGGGCTACTaGTGTTATCAAAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAPRLGY*CYQRGW
Trigger: CCACCCCCTTTGATAACAGCAGTAGCCCAGCCTGGG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCTGCCCCAGGTTTACTaGCGGCATTCTTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLPQVY*RHSWWD
Trigger: GTCCCACCAAGAATGCCGGCAGTAAACCTGGGGCAG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGAAAGCGGGGCGAGTaGTCATTCACGTCGTTGACG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGKRGE*SFTSLT
Trigger: CGTCAACGACGTGAATGACCACTCGCCCCGCTTTCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCACCAAGCTCCCCTGTaGCCTCATCTTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDHQAPL*PHLPSP
Trigger: GGGAGAAGGAAGATGAGGCCACAGGGGAGCTTGGTG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGGCGAGGCTGCACGCTaGGGGCCAAGTGGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILGEAAR*GPSGCA
Trigger: GGCGCACCCACTTGGCCCCCAGCGTGCAGCCTCGCC...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGGCGAGGCTGCACGCTaGGGGCCAAGTGGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLGEAAR*GPSGCA
Trigger: GGCGCACCCACTTGGCCCCCAGCGTGCAGCCTCGCC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAGACGTAAACCGCCATaGTGGCGTTTCGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDRRKPP*WRFVVG
Trigger: CCCCACCACGAAACGCCACCATGGCGGTTTACGTCT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGGAGCCCGCCGCTGCTaGCGCCCTTCGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKGARRC*RPSPIF
Trigger: GAAGATGGGCGAAGGGCGTCAGCAGCGGCGGGCTCC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGGAGCCCGCCGCTGCTaGCGCCCTTCGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLGARRC*RPSPIF
Trigger: GAAGATGGGCGAAGGGCGTCAGCAGCGGCGGGCTCC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGGCGCCGCTGCTGCCTaGCCGCCCATGGGGTGTATC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLGAAAA*PPMGCI
Trigger: GATACACCCCATGGGCGGTCAGGCAGCAGCGGCGCC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGGTCATTCACGTCGTTaGCGCGAATCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAGHSRR*RESPPA
Trigger: TGCAGGTGGAGATTCGCGTCAACGACGTGAATGACC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCGACGCCTCCCTCTGTaGGAAAGAGCACGTGAATTG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDARRLPL*ERAREL
Trigger: CAATTCACGTGCTCTTTCTCACAGAGGGAGGCGTCG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTCACATCATCTACGGTaGTGCTCACCAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASHHLR*CSPGRW
Trigger: CCACCTGCCTGGTGAGCATCACCGTAGATGATGTGA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCAGATTTGCCCATCATaGGGGTCGATCCGGAATGCC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAQICPS*GSIRNA
Trigger: GGCATTCCGGATCGACCCTCATGATGGGCAAATCTG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGCTGCGCCTGCACCGTaGGCACAACCACGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILAAPAP*AQPRAA
Trigger: CGCAGCCCGTGGTTGTGCTCACGGTGCAGGCGCAGC...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGAGACCACAGTGATGTaGCTCCCTAGAGGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAETTVM*LPRGVL
Trigger: AAGCACCCCTCTAGGGAGTCACATCACTGTGGTCTC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTTTTCTGGAAGGCTTTaGGCACACTGGCATCCCGGG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDFSGRL*AHWHPG
Trigger: CCCGGGATGCCAGTGTGCTCAAAGCCTTCCAGAAAA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCCTGGCGCCGCTGCTaGCTGACCGCCCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSWRRC*LTAHGV
Trigger: CACCCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACAGAGCAGGGAGCGCTaGGTCCTGGCGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKQSRER*VLAPLL
Trigger: CAGCAGCGGCGCCAGGACGCAGCGCTCCCTGCTCTG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGGGGCGCTGCCGAGCTaGGCCTGCACCGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILGALPS*ACTVST
Trigger: TGTGCTCACGGTGCAGGCGCAGCTCGGCAGCGCCCC...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGGGGCGCTGCCGAGCTaGGCCTGCACCGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKGALPS*ACTVST
Trigger: TGTGCTCACGGTGCAGGCGCAGCTCGGCAGCGCCCC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCTGCTGGCGAACACTaGCAAGGGTGTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAAAGEH*QGCSFR
Trigger: TCTGAAGGAACACCCTTGGCAGTGTTCGCCAGCAGC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTCTCCTCCAGCTCCTTaGGAAGGCTCTCGGGTAACT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSPPAP*EGSRVT
Trigger: AGTTACCCGAGAGCCTTCCCAAGGAGCTGGAGGAGA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTGGGAGCGCTGCGTCCTaGCGCCGCTGCTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFGSAAS*RRCCLT
Trigger: GGTCAGGCAGCAGCGGCGCCAGGACGCAGCGCTCCC...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTACCAGGTCGCGGTCGGTaGCGCGCACGCGACAGACCT +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILPGRGR*RARDRP
Trigger: AGGTCTGTCGCGTGCGCGCCACCGACCGCGACCTGG...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGGGCATGCTCTGCAATaGTGGCATTGTACACCTGCC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAGHALQ*WHCTPA
Trigger: GGCAGGTGTACAATGCCACCATTGCAGAGCATGCCC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGGCATGCTCTGCAATaGTGGCATTGTACACCTGCC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGHALQ*WHCTPA
Trigger: GGCAGGTGTACAATGCCACCATTGCAGAGCATGCCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTATCTCGGTGCCTGGCTaGGTCTCATCACTGATGCTC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAISVPG*VSSLML
Trigger: GAGCATCAGTGATGAGACCCAGCCAGGCACCGAGAT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAGAGGAGGCACTCCCTaGTCAGTGGCAATGACACTC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDARGGTP*SVAMTL
Trigger: GAGTGTCATTGCCACTGACCAGGGAGTGCCTCCTCT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCGTGGTTGTCCTGGCTaGAATGCCCTGGTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDRGCPG*NALVCN
Trigger: GTTACAGACCAGGGCATTCCAGCCAGGACAACCACG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTCAACCATTCCGGAGTaGCATCCACAGGGACCACCT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASTIPE*HPQGPP
Trigger: AGGTGGTCCCTGTGGATGCCACTCCGGAATGGTTGA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGATAGGCAGGAGAGCTaGTCTGAGTCCCTCGGGATA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDDRQES*SESLGI
Trigger: TATCCCGAGGGACTCAGACCAGCTCTCCTGCCTATC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGATAGGCAGGAGAGCTaGTCTGAGTCCCTCGGGATA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDADRQES*SESLGI
Trigger: TATCCCGAGGGACTCAGACCAGCTCTCCTGCCTATC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCAAGATGGTAGGGGATaGGAGAGCGTGGGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDQDGRG*ESVGVS
Trigger: CGAAACACCCACGCTCTCCCATCCCCTACCATCTTG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTACATCTGCAACTGGTaGAAGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDYICNW*KRPLPA
Trigger: TGCAGGCAGAGGACGCTTTCACCAGTTGCAGATGTA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACGGTCCCTGGCGGGCTaGGCTCGGAGACGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKRSLAG*ARRRRV
Trigger: AACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGTGAGAAAGAGCACGTaGATTGCTGGCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAVRKST*IAGRLS
Trigger: TGACAACCGGCCAGCAATTCACGTGCTCTTTCTCAC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGTGTGGACCATCTTTaGTTGCAGGGAGCCGAGATT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGVDHL*LQGAEI
Trigger: AATCTCGGCTCCCTGCAATCAAAGATGGTCCACACC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCTCCTTCCATGTGAATaGCCAAGAGACCCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLLPCE*PRDPWL
Trigger: CAACCACGGGTCTCTTGGTCATTCACATGGAAGGAG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTCAGAGCAGGGAGCGCTaGGTCCTGGCGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFQSRER*VLAPLL
Trigger: CAGCAGCGGCGCCAGGACGCAGCGCTCCCTGCTCTG...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCGGCCGCCGTCCCATaGCTCGATCTGCAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSAAVP*LDLQPV
Trigger: CACCGGCTGCAGATCGAGGCATGGGACGGCGGCCGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAGGGTCGATCCGGAATaGCTGAGGTGCTTCATAGCT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDARVDPE*LRCFIA
Trigger: AGCTATGAAGCACCTCAGGCATTCCGGATCGACCCT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCACACGGACTACAAGTaGTCCCTCTGTGTAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDHTDYK*SLCVVH
Trigger: GTGCACTACACAGAGGGAGCACTTGTAGTCCGTGTG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACGGATCGTGGGCAACTaGCAGGCGGAAGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKRIVGN*QAEGGP
Trigger: GGGACCGCCTTCCGCCTGCCAGTTGCCCACGATCCG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTACCGGCGTCCGGATCGTaGGCAACTGGCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILPASGS*ATGRRK
Trigger: CTTCCGCCTGCCAGTTGCCCACGATCCGGACGCCGG...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCGGCGTCCGGATCGTaGGCAACTGGCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPASGS*ATGRRK
Trigger: CTTCCGCCTGCCAGTTGCCCACGATCCGGACGCCGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGGCCTGCGGGGTCCTTaGGCAGGTCGGACGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILGLRGP*AGRTVA
Trigger: TGCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCC...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATGGACACGCGCACCGTaGCAACCTCAGGCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILWTRAP*QPQARR
Trigger: GCGCCGAGCCTGAGGTTGCCACGGTGCGCGTGTCCA...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGAGCACGTGAATTGCTaGCCGGTTGTCATTCACGTC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDEHVNC*PVVIHV
Trigger: GACGTGAATGACAACCGGCCAGCAATTCACGTGCTC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCCACACTCTGCGGTGTaGACCATCTTTGATTGCAGG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDPHSAV*TIFDCR
Trigger: CCTGCAATCAAAGATGGTCCACACCGCAGAGTGTGG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCATGCTCTGCAATGGTaGCATTGTACACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDHALQW*HCTPAS
Trigger: GGAGGCAGGTGTACAATGCCACCATTGCAGAGCATG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGATGATCTCGGTGCCTaGCTGGGTCTCATCACTGAT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDADDLGA*LGLITD
Trigger: ATCAGTGATGAGACCCAGCCAGGCACCGAGATCATC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTTTCCAGGGAGACACTaGGGGAAGAAGGGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDFPGRH*GKKGLL
Trigger: TAACAGGCCCTTCTTCCCCCAGTGTCTCCCTGGAAA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGGGGTGGATGAGAAATaGATTCGTGCCAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAGVDEK*IRARVV
Trigger: CACAACCCTGGCACGAATCCATTTCTCATCCACCCC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCCCCAAATGTTTGGCTaGCTTCTGCTGTTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDPQMFG*LLLFRQ
Trigger: CTGCCGAAACAGCAGAAGCCAGCCAAACATTTGGGG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTGCCGGCATTCTTGGTaGGACTGCTTTAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDCRHSW*DCFNPR
Trigger: CCTGGGATTAAAGCAGTCCCACCAAGAATGCCGGCA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTCCTTCTCTCAACAGTaGAGACAAGGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASFSQQ*RQGRRL
Trigger: CAGCCTCCTGCCTTGTCTCCACTGTTGAGAGAAGGA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTACCAGCAGGGCTGCCTaGGGATGCACGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLTSRAA*GCTPWS
Trigger: GGACCAAGGCGTGCATCCTCAGGCAGCCCTGCTGGT...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCCTGGTCAGTGGCAATaGCACTCATTCTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAPGQWQ*HSFCRK
Trigger: CTTCCTACAGAATGAGTGTCATTGCCACTGACCAGG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCACTAAATGTATGCTaGGATCTGGCTTCACGGTCG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDALNVC*DLASRS
Trigger: CGACCGTGAAGCCAGATCTCAGCATACATTTAGTGC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAGCTGTAGGAGCTGGTaGGCTCGTAATCTAGAATCG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASCRSW*ARNLES
Trigger: CGATTCTAGATTACGAGCTCACCAGCTCCTACAGCT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGTCACGGTCATTTGCTaGGACCACAGTGATGTGACT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDVTVIC*DHSDVT
Trigger: AGTCACATCACTGTGGTCTCAGCAAATGACCGTGAC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGTGGCCACTGGAGTTTaGGTGTCTGTACAGATTGAC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAVATGV*VSVQID
Trigger: GTCAATCTGTACAGACACTCAAACTCCAGTGGCCAC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAGAGGTCGTCTGAGTTaGAAGAGCTGCACACCTTAC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDRGRLS*KSCTPY
Trigger: GTAAGGTGTGCAGCTCTTTCAACTCAGACGACCTCT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGCGTCCTGGCGCCGCTaGTGCCTGACCGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHASWRR*CLTAHG
Trigger: CCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGACGC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCCACCACCAACTGGTaGCAGGCCTGTGCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSTTNW*QACASR
Trigger: CCGCGAGGCACAGGCCTGGCACCAGTTGGTGGTGGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGCAGCGTCTCCTCCGTaGTCAGCGGCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHAASPP*SAAGTP
Trigger: CGGGGTCCCCGCCGCTGAGCACGGAGGAGACGCTGC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGGCGTGATCACTGCCTaGCTCGTCGGCATCGGAGGC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLGVITA*LVGIGG
Trigger: GCCTCCGATGCCGACGAGGCAGGCAGTGATCACGCC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTGCAGGCTGGGGCGCTaGCGAGCTGCGCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRCRLGR*RAAPAP
Trigger: CGGTGCAGGCGCAGCTCGGCAGCGCCCCAGCCTGCA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTACGAGGTACAAGGCTGTaGCAGGGGGCGTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILRGTRL*QGAWSG
Trigger: CCCAGACCACGCCCCCTGGCACAGCCTTGTACCTCG...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAAGCGTGAGCTCCCGCTaGTCGCCCGCGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRSVSSR*SPAPRL
Trigger: CAGCCTGGGCGCGGGCGAGCAGCGGGAGCTCACGCT...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCTCATGGCTAGCACTTaGTTCTCTGTCCAGACTGTG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLMAST*FSVQTV
Trigger: CACAGTCTGGACAGAGAAGCAAGTGCTAGCCATGAG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCAGCCACTGTCAGATaGCAGAATGACAAGCTCATG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDAATVR*QNDKLM
Trigger: CATGAGCTTGTCATTCTGGCATCTGACAGTGGCTGC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGACCACCTCGTTACTaGAGTCGTCAGTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGPPRY*SRQFSG
Trigger: TCCAGAAAACTGACGACTGCAGTAACGAGGTGGTCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGGACCACCTCGTTACTaGAGTCGTCAGTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAGPPRY*SRQFSG
Trigger: TCCAGAAAACTGACGACTGCAGTAACGAGGTGGTCC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTGTTTGGCTGGCTTCTaGTGTTTCGGCAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDCLAGF*CFGSHH
Trigger: ATGGTGACTGCCGAAACAGCAGAAGCCAGCCAAACA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGACAAGGCAGGAGGCTaGATCGTCAATAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDDKAGG*IVNRER
Trigger: TCTTTCCCTATTGACGATGCAGCCTCCTGCCTTGTC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTAGCGCACGAAGCCATTaGGCCCCAGGTCGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFSARSH*APGRGR
Trigger: CCGACCGCGACCTGGGGCCCAATGGCTTCGTGCGCT...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTTGGCTGAAGAGAGGTaGTTGGTCATTGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLAEER*LVIEVS
Trigger: GCTGACCTCAATGACCAACCACCTCTCTTCAGCCAA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTTGGCTGAAGAGAGGTaGTTGGTCATTGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALAEER*LVIEVS
Trigger: GCTGACCTCAATGACCAACCACCTCTCTTCAGCCAA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTTCGAAAGTCCAGGATaGGCTGTGTTCGCGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDFESPG*AVFAFL
Trigger: GAGAAACGCGAACACAGCCCATCCTGGACTTTCGAA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGCGAGGCTGCACGCTaGGGGCCAAGTGGGTGCGCC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGEAAR*GPSGCA
Trigger: GGCGCACCCACTTGGCCCCCAGCGTGCAGCCTCGCC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGGTGGCGTTTCGTGGTaGGGAGCCGCGGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLGGVSW*GAAVCH
Trigger: GTGACAGACCGCGGCTCCCCACCACGAAACGCCACC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATATGTATGCTGAGATCTaGCTTCACGGTCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDMYAEI*LHGRGC
Trigger: ACACCCTCGACCGTGAAGCCAGATCTCAGCATACAT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCCTTCCACAGAACAGTaGCCACTGGAGTTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAPSTEQ*PLEFEC
Trigger: ACACTCAAACTCCAGTGGCCACTGTTCTGTGGAAGG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTATTTTGAGCACAGGTaGTGCTGCAGCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDYFEHR*CCSLPL
Trigger: AAGGGGAAGGCTGCAGCACCACCTGTGCTCAAAATA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTACTGCCGGCATTCTTaGTGGGACTGCTTTAATCCC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDYCRHS*WDCFNP
Trigger: GGGATTAAAGCAGTCCCACCAAGAATGCCGGCAGTA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGGCGCCGCTGCTGCCTaGCCGCCCATGGGGTGTATC +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHGAAAA*PPMGCI
Trigger: GATACACCCCATGGGCGGTCAGGCAGCAGCGGCGCC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGCGCCGCTGCTGCCTaGCCGCCCATGGGGTGTATC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGAAAA*PPMGCI
Trigger: GATACACCCCATGGGCGGTCAGGCAGCAGCGGCGCC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAAAGCCATAGAGTCCTaGATCTGCATCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAKAIES*ICIRGC
Trigger: ACAGCCTCTGATGCAGATTCAGGACTCTATGGCTTT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCGTCACATAGGTTaGTGGGTTAAACACAGGATG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDARHIG*WVKHRM
Trigger: CATCCTGTGTTTAACCCATCAACCTATGTGACGAGC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGCTGCGCCTGCACCGTaGGCACAACCACGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCAAPAP*AQPRAA
Trigger: CGCAGCCCGTGGTTGTGCTCACGGTGCAGGCGCAGC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAAGGAGGAGATTATATaGAGCGCGCACACACAAGGA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAKEEII*SAHTQG
Trigger: TCCTTGTGTGTGCGCGCTTCATATAATCTCCTCCTT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGTCACATTCACAGCCTaGTCAGATGCTGTTACTGTC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDVTFTA*SDAVTV
Trigger: GACAGTAACAGCATCTGATCAGGCTGTGAATGTGAC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTTGGAATTGACTCCTaGATCTCTGTCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALGIDS*ISVQSF
Trigger: GAAGCTCTGGACAGAGATTCAGGAGTCAATTCCAAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGCAGGAGAGCTGGTCTaGGTCCCTCGGGATACCCGA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKAGELV*VPRDTR
Trigger: TCGGGTATCCCGAGGGACTCAGACCAGCTCTCCTGC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCTAGAGCATTGTATGTaGGCACCATCTAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLEHCM*APSSTA
Trigger: AGCAGTGCTAGATGGTGCTCACATACAATGCTCTAG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGCGTCCTGGCGCCGCTaGTGCCTGACCGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIASWRR*CLTAHG
Trigger: CCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGACGC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGATCGATCTGCAGCCGGTaGGCCGCCGCCTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRSICSR*AAASSR
Trigger: CCGAGAGGAGGCGGCGGCGCACCGGCTGCAGATCGA...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTCGATCTGCAGCCGGTaGGCCGCCGCCTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRSICSR*AAASSR
Trigger: CCGAGAGGAGGCGGCGGCGCACCGGCTGCAGATCGA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTCCCATGCCTCGATCTaGAGCCGGTGCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRSHASI*SRCAAA
Trigger: GGCGGCGGCGCACCGGCTGCAGATCGAGGCATGGGA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGCGCGGTACTCGTCCTaGTCAAAGACCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILARYSS*SKTGGL
Trigger: CAACCCGCCGGTCTTTGAGCAGGACGAGTACCGCGC...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAAAGAGCACGTGAATTaGTGGCCGGTTGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAKEHVN*WPVVIH
Trigger: GTGAATGACAACCGGCCAGCAATTCACGTGCTCTTT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAAAGAGCACGTGAATTaGTGGCCGGTTGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDKEHVN*WPVVIH
Trigger: GTGAATGACAACCGGCCAGCAATTCACGTGCTCTTT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTGGCGTGATCACTGCCTaGCTCGTCGGCATCGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFGVITA*LVGIGG
Trigger: GCCTCCGATGCCGACGAGGCAGGCAGTGATCACGCC...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTGCAGGCTGGGGCGCTaGCGAGCTGCGCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLCRLGR*RAAPAP
Trigger: CGGTGCAGGCGCAGCTCGGCAGCGCCCCAGCCTGCA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGCAAAGACGCCTGGCTaGGGGCTGGCGATGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKAKTPG*GLAMEY
Trigger: GTACTCCATCGCCAGCCCGCAGCCAGGCGTCTTTGC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTCTGCCTGACCGCCCATaGGGTGTATCTCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLLPDRP*GVSLLP
Trigger: CGGGAGGAGAGATACACCCCATGGGCGGTCAGGCAG...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGGAGCGCTGCGTCCTaGCGCCGCTGCTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGSAAS*RRCCLT
Trigger: GGTCAGGCAGCAGCGGCGCCAGGACGCAGCGCTCCC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGCGGAAGGCGGTCCCTaGCGGGCTGAGCTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCAEGGP*RAELGD
Trigger: GTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTGCGGAAGGCGGTCCCTaGCGGGCTGAGCTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRAEGGP*RAELGD
Trigger: GTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGC...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCCAGGTCGCGGTCGGTaGCGCGCACGCGACAGACCT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCPGRGR*RARDRP
Trigger: AGGTCTGTCGCGTGCGCGCCACCGACCGCGACCTGG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTCCAGGTCGCGGTCGGTaGCGCGCACGCGACAGACCT +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRPGRGR*RARDRP
Trigger: AGGTCTGTCGCGTGCGCGCCACCGACCGCGACCTGG...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATGCTCACCAGGCAGGTaGCAGAGAGTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILCSPGR*QRVGAL
Trigger: GAGAGCCCCCACTCTCTGCCACCTGCCTGGTGAGCA...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGAGATCATAGGTAGCTaGATCCCTTTCCCTGTCGAT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAEIIGS*IPFPVD
Trigger: ATCGACAGGGAAAGGGATCCAGCTACCTATGATCTC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGAGATCATAGGTAGCTaGATCCCTTTCCCTGTCGAT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDEIIGS*IPFPVD
Trigger: ATCGACAGGGAAAGGGATCCAGCTACCTATGATCTC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGACGACACGTTTCCTaGAATAAGCTCATAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGRHVS*NKLISH
Trigger: GTGGCTTATGAGCTTATTCCAGGAAACGTGTCGTCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGATGGCAAAGACGCCTaGCTGCGGGCTGGCGATGGA +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILDGKDA*LRAGDG
Trigger: TCCATCGCCAGCCCGCAGCCAGGCGTCTTTGCCATC...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTACGCTGGGGGCCAAGTaGGTGCGCCTGTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLTLGAK*VRLCLQ
Trigger: CTGCAAACACAGGCGCACCCACTTGGCCCCCAGCGT...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGTGCCAAATGAGGGGTaGATGAGAAATGGATTCGTG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAVPNEG*MRNGFV
Trigger: CACGAATCCATTTCTCATCCACCCCTCATTTGGCAC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTCTGTCAAGTATGGTaGTTGTCACTACCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALCQVW*LSLPLQ
Trigger: CTGGAGAGGTAGTGACAACCACCATACTTGACAGAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCTGGCTGGAATGCCCTaGTCTGTAACTTTTAACTGC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLAGMP*SVTFNC
Trigger: GCAGTTAAAAGTTACAGACCAGGGCATTCCAGCCAG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTGCTTTCTAAGTCTGTaGCTGACAGAGTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDACFLSL*LTESAL
Trigger: CAGTGCTGACTCTGTCAGCCACAGACTTAGAAAGCA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTACTGAGGCAAGAGGTTaGAATTTGGGCTCCCAACTA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDATEARG*NLGSQL
Trigger: TAGTTGGGAGCCCAAATTCCAACCTCTTGCCTCAGT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATACTGAGGCAAGAGGTTaGAATTTGGGCTCCCAACTA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDTEARG*NLGSQL
Trigger: TAGTTGGGAGCCCAAATTCCAACCTCTTGCCTCAGT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGAGCCCGCCGCTGCTaGCGCCCTTCGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGARRC*RPSPIF
Trigger: GAAGATGGGCGAAGGGCGTCAGCAGCGGCGGGCTCC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGCCGCGCAGTGCGGATaGTGCCGGTGTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSAAQCG*CRCPGA
Trigger: TGCACCCGGACACCGGCATCATCCGCACTGCGCGGC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGCCGCGCAGTGCGGATaGTGCCGGTGTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIAAQCG*CRCPGA
Trigger: TGCACCCGGACACCGGCATCATCCGCACTGCGCGGC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGACGGTCCCTGGCGGGCTaGGCTCGGAGACGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRRSLAG*ARRRRV
Trigger: AACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCG...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTACGCGGCCTCGGACACTaGGGCCTTGTAATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILRGLGH*GLVMLL
Trigger: CAACAGCATTACAAGGCCTCAGTGTCCGAGGCCGCG...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTCCCTGTCGATATCTTaGGAAACACAGATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSLSIS*ETQICP
Trigger: TGGGCAAATCTGTGTTTCTCAAGATATCGACAGGGA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATACGGGCTGCGTCTCGTaGTCCAGGGGCTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHTGCVS*SRGFRV
Trigger: CACCCGGAAGCCCCTGGATCACGAGACGCAGCCCGT...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAACGGGCTGCGTCTCGTaGTCCAGGGGCTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRTGCVS*SRGFRV
Trigger: CACCCGGAAGCCCCTGGATCACGAGACGCAGCCCGT...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGGCTGCGCCTGCACCGTaGGCACAACCACGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLAAPAP*AQPRAA
Trigger: CGCAGCCCGTGGTTGTGCTCACGGTGCAGGCGCAGC...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACGATGGAGTACCGGATaGGTCCGTTCCGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKRWSTG*VRSAHC
Trigger: ACAGTGGGCGGAACGGACTCATCCGGTACTCCATCG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCATCATCTTTGGCATTaGAGACATACACCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAHHLWH*RHTPGF
Trigger: GAACCCTGGTGTATGTCTTCAATGCCAAAGATGATG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTATGAAGCACCTGGCATaGTTTCAAACTGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAMKHLA*FQTEAW
Trigger: CCAAGCTTCAGTTTGAAATCATGCCAGGTGCTTCAT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCATGCTGTCCTGAATTaGGTCAGGAGCAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDHAVLN*VRSKSF
Trigger: AAAGCTTTTGCTCCTGACTCAATTCAGGACAGCATG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGAAGTAAGCTCTAGCTaGCTCTGCCGCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLEVSSS*LCRGSH
Trigger: GTGGCTGCCGCGGCAGAGGCAGCTAGAGCTTACTTC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTCCTGGCGCCGCTGCTaGCTGACCGCCCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLSWRRC*LTAHGV
Trigger: CACCCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGCGTCCTGGCGCCGCTaGTGCCTGACCGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHASWRR*CLTAHG
Trigger: CCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGACGC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCAGAGCAGGGAGCGCTaGGTCCTGGCGCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLQSRER*VLAPLL
Trigger: CAGCAGCGGCGCCAGGACGCAGCGCTCCCTGCTCTG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTATGCCGGTGTCCGGGTaGACGTGGAAGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFMPVSG*TWKSSS
Trigger: GCTGGACGACTTCCACGTGCACCCGGACACCGGCAT...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTACGCGAATCTCCACCTaGACCACAGCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFTRIST*TTAPSS
Trigger: GCTGCTGGGCGCTGTGGTGCAGGTGGAGATTCGCGT...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTCCCATGCCTCGATCTaGAGCCGGTGCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLSHASI*SRCAAA
Trigger: GGCGGCGGCGCACCGGCTGCAGATCGAGGCATGGGA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGATCGGCCGCCGTCCCATaGCTCGATCTGCAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRSAAVP*LDLQPV
Trigger: CACCGGCTGCAGATCGAGGCATGGGACGGCGGCCGA...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGCAGGGAGCCGAGATTaGAGGGAGCCGAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILAGSRD*REPRVG
Trigger: TCCAACTCTCGGCTCCCTGCAATCTCGGCTCCCTGC...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGGGGGCGCTGCCGAGCTaGGCCTGCACCGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLGALPS*ACTVST
Trigger: TGTGCTCACGGTGCAGGCGCAGCTCGGCAGCGCCCC...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGAGGCTTCATACAGGTaGTGCTTAAATACTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAEASYR*CLNTGA
Trigger: AGCTCCAGTATTTAAGCAGCACCTGTATGAAGCCTC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAGAGGATTGTTGTGGTaGTGGACAATGAAGGGAATC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDRGLLW*WTMKGI
Trigger: GATTCCCTTCATTGTCCAGCACCACAACAATCCTCT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGTAAAATTGCTGATTTaGTCCCGGTCCAAAGCACGA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDVKLLI*SRSKAR
Trigger: TCGTGCTTTGGACCGGGAGCAAATCAGCAATTTTAC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTCAAGACTGCTACTTTaGAATAGGCTCTATGCCCAC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSRLLL*NRLYAH
Trigger: GTGGGCATAGAGCCTATTGCAAAGTAGCAGTCTTGA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATGTTTCGGAGGCACCTaGCCCAGGTTTACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKCFGGT*PRFTAG
Trigger: GCCGGCAGTAAACCTGGGGCAGGTGCCTCCGAAACA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGGGAGCGCTGCGTCCTaGCGCCGCTGCTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAGSAAS*RRCCLT
Trigger: GGTCAGGCAGCAGCGGCGCCAGGACGCAGCGCTCCC...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGTGAGGTTGAACAACTaGGCAGAGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILVRLNN*AEEPEA
Trigger: GGCCTCGGGCTCCTCTGCCCAGTTGTTCAACCTCAC...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCGGATCGTGGGCAACTaGCAGGCGGAAGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRIVGN*QAEGGP
Trigger: GGGACCGCCTTCCGCCTGCCAGTTGCCCACGATCCG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCCGGCGTCCGGATCGTaGGCAACTGGCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCPASGS*ATGRRK
Trigger: CTTCCGCCTGCCAGTTGCCCACGATCCGGACGCCGG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGCCTGCGGGGTCCTTaGGCAGGTCGGACGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGLRGP*AGRTVA
Trigger: TGCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTGGACACGCGCACCGTaGCAACCTCAGGCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRWTRAP*QPQARR
Trigger: GCGCCGAGCCTGAGGTTGCCACGGTGCGCGTGTCCA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCGCTTTCGGAATCAATaGCAAAAGATGGTCCACACT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDRFRNQ*QKMVHT
Trigger: AGTGTGGACCATCTTTTGCCATTGATTCCGAAAGCG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTTGCTCACCAGGCAGGTaGCAGAGAGTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFCSPGR*QRVGAL
Trigger: GAGAGCCCCCACTCTCTGCCACCTGCCTGGTGAGCA...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTACGTAAACCGCCATGGTaGCGTTTCGTGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILRKPPW*RFVVGS
Trigger: GCTCCCCACCACGAAACGCCACCATGGCGGTTTACG...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATACAATGAGCTCATCCTaGAAAGATGGGGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDTMSSS*KDGEWS
Trigger: TGACCATTCCCCATCTTTCCAGGATGAGCTCATTGT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAGAATGACAAGCTCATaGCTAGCACTTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDRMTSS*LALASL
Trigger: CAGAGAAGCAAGTGCTAGCCATGAGCTTGTCATTCT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCGAGTCTGGCACCCTaGACTCGTGGTCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPSLAP*TRGHSE
Trigger: CTCTGAGTGACCACGAGTCCAGGGTGCCAGACTCGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGAGATGGAGAAAAATTaGGAGTCATGCCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDEMEKN*ESCLLA
Trigger: TGCCAGAAGGCATGACTCCCAATTTTTCTCCATCTC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTGTTTGGTGGCATTGTaGCACTGGATACAGACTGAT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDACLVAL*HWIQTD
Trigger: ATCAGTCTGTATCCAGTGCCACAATGCCACCAAACA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGTAGTACTTGTTTGGTaGCATTGTGGCACTGGATAC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAVVLVW*HCGTGY
Trigger: GTATCCAGTGCCACAATGCCACCAAACAAGTACTAC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCTTGTAGTACTTGTTTaGTGGCATTGTGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLVVLV*WHCGTG
Trigger: TCCAGTGCCACAATGCCACCAAACAAGTACTACAAG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGGAGCCCGCCGCTGCTaGCGCCCTTCGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHGARRC*RPSPIF
Trigger: GAAGATGGGCGAAGGGCGTCAGCAGCGGCGGGCTCC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGCCGCGCAGTGCGGATaGTGCCGGTGTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSAAQCG*CRCPGA
Trigger: TGCACCCGGACACCGGCATCATCCGCACTGCGCGGC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGCCGCGCAGTGCGGATaGTGCCGGTGTCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAAAQCG*CRCPGA
Trigger: TGCACCCGGACACCGGCATCATCCGCACTGCGCGGC...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCGGTCCCTGGCGGGCTaGGCTCGGAGACGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIRSLAG*ARRRRV
Trigger: AACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTTGTAGCCCTGAGTGCTaGACAGTCCGGCGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFCSPEC*TVRRPD
Trigger: ATCCGGACGCCGGACTGTTCAGCACTCAGGGCTACA...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTGTGCCCAGCCGCGGGTaGATGGAGAACTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRVPSRG*MENFPP
Trigger: CGGCGGAAAGTTCTCCATTCACCCGCGGCTGGGCAC...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAGTGCCCAGCCGCGGGTaGATGGAGAACTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRVPSRG*MENFPP
Trigger: CGGCGGAAAGTTCTCCATTCACCCGCGGCTGGGCAC...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTACCAGCAGGGCTGCCTaGGGATGCACGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRTSRAA*GCTPWS
Trigger: GGACCAAGGCGTGCATCCTCAGGCAGCCCTGCTGGT...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTACCAGCAGGGCTGCCTaGGGATGCACGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCTSRAA*GCTPWS
Trigger: GGACCAAGGCGTGCATCCTCAGGCAGCCCTGCTGGT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGATAGTGGGATCACCTaGATATTAACAACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDDSGIT*ILTTAC
Trigger: ACAGGCAGTTGTTAATATTCAGGTGATCCCACTATC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAAACAAGTCTCCGGTTaGGCTGTCTATTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAKQVSG*AVYFKV
Trigger: CACTTTGAAATAGACAGCTCAACCGGAGACTTGTTT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCTAGTACTCGAAGGGTaGAGACTTCTTGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLVLEG*RLLEFL
Trigger: GAGAAATTCAAGAAGTCTTCACCCTTCGAGTACTAG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTCTGTGTAGTGCACTaGATCAGAAATTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALCVVH*IRNLDE
Trigger: CTCATCCAAATTTCTGATTCAGTGCACTACACAGAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTATCATCCAGGACACTaGCAAACACAACTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDYHPGH*QTQLQK
Trigger: CTTTTGCAGTTGTGTTTGTCAGTGTCCTGGATGATA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAATACAGCTGAAGCTTaGGAACATAAACTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDANTAEA*EHKLRC
Trigger: GCACCTCAGTTTATGTTCTCAAGCTTCAGCTGTATT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTTGTTCATTCATTCATaGCCAATGGTGAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLFIHS*PMVSRY
Trigger: GTACCTGCTCACCATTGGTCATGAATGAATGAACAA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAAAAGCGTCCTCTGCCTaGAGCTCACGCAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILKASSA*SSRRQG
Trigger: TCCCTGTCTGCGTGAGCTGCAGGCAGAGGACGCTTT...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGGTGAAAGCGTCCTCTaGCTGCAGCTCACGCAGACA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKGESVL*LQLTQT
Trigger: TGTCTGCGTGAGCTGCAGGCAGAGGACGCTTTCACC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGGCTCTCGGGTAACTaGCAGCTTGTGGCAGGATCG +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLRLSGN*QLVAGS
Trigger: CGATCCTGCCACAAGCTGGCAGTTACCCGAGAGCCT...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAGGCTCTCGGGTAACTaGCAGCTTGTGGCAGGATCG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKRLSGN*QLVAGS
Trigger: CGATCCTGCCACAAGCTGGCAGTTACCCGAGAGCCT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATTCCTGGCGCCGCTGCTaGCTGACCGCCCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHSWRRC*LTAHGV
Trigger: CACCCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGA...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCGGAGACGTCGAGTTaGAGGGAGTCGAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSETSS*RESRGK
Trigger: CTTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCCCATGCCTCGATCTaGAGCCGGTGCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSHASI*SRCAAA
Trigger: GGCGGCGGCGCACCGGCTGCAGATCGAGGCATGGGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGACTGGTGCCAGGCCTGTaGCTCGCGGTCCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRLVPGL*LAVQRS
Trigger: AGACCTCTGGACCGCGAGGCACAGGCCTGGCACCAG...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTCCACCACCAACTGGTaGCAGGCCTGTGCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSTTNW*QACASR
Trigger: CCGCGAGGCACAGGCCTGGCACCAGTTGGTGGTGGA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGCCAGGCGTGATCACTaGCTGCCTCGTCGGCATCGG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHARRDH*LPRRHR
Trigger: CCGATGCCGACGAGGCAGGCAGTGATCACGCCTGGC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGCCAGGCGTGATCACTaGCTGCCTCGTCGGCATCGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCARRDH*LPRRHR
Trigger: CCGATGCCGACGAGGCAGGCAGTGATCACGCCTGGC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTTCAAACTCAGCAGGTaGCAGAGTTGTCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDFKLSR*QSCLEN
Trigger: ATTTTCCAGACAACTCTGGCACCTGCTGAGTTTGAA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTTCAAACTCAGCAGGTaGCAGAGTTGTCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAFKLSR*QSCLEN
Trigger: ATTTTCCAGACAACTCTGGCACCTGCTGAGTTTGAA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTCTGCCGAGCTGCGCCTaGACCGTGAGCACAACCACG +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRLPSCA*TVSTTT
Trigger: CGTGGTTGTGCTCACGGTGCAGGCGCAGCTCGGCAG...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCTGCCGAGCTGCGCCTaGACCGTGAGCACAACCACG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLPSCA*TVSTTT
Trigger: CGTGGTTGTGCTCACGGTGCAGGCGCAGCTCGGCAG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATCTGCCGAGCTGCGCCTaGACCGTGAGCACAACCACG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHLPSCA*TVSTTT
Trigger: CGTGGTTGTGCTCACGGTGCAGGCGCAGCTCGGCAG...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCGAGGTACAAGGCTGTaGCAGGGGGCGTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRGTRL*QGAWSG
Trigger: CCCAGACCACGCCCCCTGGCACAGCCTTGTACCTCG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCCTAAGAGGCGAGGCTaGACGCTGGGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCPKRRG*TLGAKW
Trigger: CCACTTGGCCCCCAGCGTGCAGCCTCGCCTCTTAGG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTCCTAAGAGGCGAGGCTaGACGCTGGGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRPKRRG*TLGAKW
Trigger: CCACTTGGCCCCCAGCGTGCAGCCTCGCCTCTTAGG...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAACAGTCATCTCATGGTaGCCCCGGTGCTCACGATCC +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILTVISW*PRCSRS
Trigger: GGATCGTGAGCACCGGGGGCACCATGAGATGACTGT...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCTGAATATTAACAACTaGCTGTCCTTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLNINN*LSLKRR
Trigger: CCTCCTCTTCAAGGACAGGCAGTTGTTAATATTCAG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTCATACAGGTGCTaGTTAAATACTGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDASYRC*LNTGAS
Trigger: TGAAGCTCCAGTATTTAAGCAGCACCTGTATGAAGC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTTCTGTAATTTCCACTaGTTCAGAGGGGAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDFCNFH*FRGEKS
Trigger: GCTTTTCTCCCCTCTGAAGCAGTGGAAATTACAGAA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTGCCCCAGGTTTACTaGCGGCATTCTTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLPQVY*RHSWWD
Trigger: GTCCCACCAAGAATGCCGGCAGTAAACCTGGGGCAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCACCTCTTCTGCCCCTaGATTTCTTTAAACGAATCT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDHLFCP*ISLNES
Trigger: AGATTCGTTTAAAGAAATCCAGGGGCAGAAGAGGTG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGTGTCCGGGTGCACGTaGAAGTCGTCCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHVSGCT*KSSSSG
Trigger: CCCGCTGCTGGACGACTTCCACGTGCACCCGGACAC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGACAGCGCCCAGCAGCGTaGCGGCGACGAAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRQRPAA*RRRSCS
Trigger: ACTACAGCTTCGTCGCCGCCACGCTGCTGGGCGCTG...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGCGGAAGGCGGTCCCTaGCGGGCTGAGCTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHAEGGP*RAELGD
Trigger: GTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCGGATCGTGGGCAACTaGCAGGCGGAAGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLRIVGN*QAEGGP
Trigger: GGGACCGCCTTCCGCCTGCCAGTTGCCCACGATCCG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGGACACGCGCACCGTaGCAACCTCAGGCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIWTRAP*QPQARR
Trigger: GCGCCGAGCCTGAGGTTGCCACGGTGCGCGTGTCCA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTCGTCCAGCACGGCGATaGACACGCGCACCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRRPARR*TRAPWQ
Trigger: TTGCCACGGTGCGCGTGTCCATCGCCGTGCTGGACG...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGCAGGTGGCAGAGAGTaGGGGCTCTCCGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHAGGRE*GLSEVL
Trigger: CAGGACCTCGGAGAGCCCCCACTCTCTGCCACCTGC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTCCAGCCGCGGGTGAATaGAGAACTTTCCGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLPAAGE*RTFRRD
Trigger: ATCTCGGCGGAAAGTTCTCCATTCACCCGCGGCTGG...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCAGCCGCGGGTGAATaGAGAACTTTCCGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPAAGE*RTFRRD
Trigger: ATCTCGGCGGAAAGTTCTCCATTCACCCGCGGCTGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAGCACAGTCATCTCATaGTGCCCCCGGTGCTCACGA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSTVIS*CPRCSR
Trigger: TCGTGAGCACCGGGGGCACCATGAGATGACTGTGCT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGCACAGTCATCTCATaGTGCCCCCGGTGCTCACGA +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLSTVIS*CPRCSR
Trigger: TCGTGAGCACCGGGGGCACCATGAGATGACTGTGCT...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGTGGCGTTTCGTGGTaGGGAGCCGCGGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGGVSW*GAAVCH
Trigger: GTGACAGACCGCGGCTCCCCACCACGAAACGCCACC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAAGACGTAAACCGCCATaGTGGCGTTTCGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILRRKPP*WRFVVG
Trigger: CCCCACCACGAAACGCCACCATGGCGGTTTACGTCT...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTGTCAGGATGACAGTTaGAATGCTTTCTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDACQDDS*NAFSVK
Trigger: CTTGACAGAGAAAGCATTCCAACTGTCATCCTGACA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGTAACTGTCAAAGTCTaGGATGAAGAAAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDVTVKV*DEESAG
Trigger: ACCAGCACTTTCTTCATCCCAGACTTTGACAGTTAC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGAAAAGAAGGACTGTaGTCATTGGCATCCAAAACT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGKEGL*SLASKT
Trigger: AGTTTTGGATGCCAATGACCACAGTCCTTCTTTTCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGGAAAAGAAGGACTGTaGTCATTGGCATCCAAAACT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAGKEGL*SLASKT
Trigger: AGTTTTGGATGCCAATGACCACAGTCCTTCTTTTCC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCGGTCCCTGGCGGGCTaGGCTCGGAGACGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHRSLAG*ARRRRV
Trigger: AACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCG...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTACGACGCCTCCCTCTGTaGGAAAGAGCACGTGAATTG +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILRRLPL*ERAREL
Trigger: CAATTCACGTGCTCTTTCTCACAGAGGGAGGCGTCG...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTGAGGTGGTTGGTCATTaGGGTCAGCGACCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFEVVGH*GQRPGV
Trigger: TACTCCGGGTCGCTGACCTCAATGACCAACCACCTC...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCACATCATCTACGGTaGTGCTCACCAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSHHLR*CSPGRW
Trigger: CCACCTGCCTGGTGAGCATCACCGTAGATGATGTGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAGCCCACCACCGTCTTaGGCAGAGACCATCAACGAA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSPPPS*AETINE
Trigger: TTCGTTGATGGTCTCTGCTCAAGACGGTGGTGGGCT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTACGGGCTGCGTCTCGTaGTCCAGGGGCTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSTGCVS*SRGFRV
Trigger: CACCCGGAAGCCCCTGGATCACGAGACGCAGCCCGT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTTCTCATCCGAGGTCCTaGGGAACGCTGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFSHPRS*GTLGGC
Trigger: ACAACCACCCAGCGTTCCTCAGGACCTCGGATGAGA...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCTTCGTCTGGATCGTaGGCAGTTATGTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPSSGS*AVMWWT
Trigger: GGTCCACCACATAACTGCTCACGATCCAGACGAAGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATATAAACTCTGGTGCGTaGTCGTTTTCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDINSGA*SFSSST
Trigger: TGTTGAAGATGAAAACGATCACGCACCAGAGTTTAT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAAAACGATGAGTTaGACCTCATTTCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDAKTMS*TSFLTS
Trigger: TGAAGTCAGAAATGAGGTTCAACTCATCGTTTTAGC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTTGATTCAGGAACTGTaGCCTGATAGAAATCTTGAG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDLIQEL*PDRNLE
Trigger: CTCAAGATTTCTATCAGGTCACAGTTCCTGAATCAA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGTACTTGTATTGATATaGCAGCTGTGGAACTCAATG +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDVLVLI*QLWNSM
Trigger: CATTGAGTTCCACAGCTGTCATATCAATACAAGTAC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCATGGCATGTACCACTaGTGTGTGTTCCTAATAATT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDHGMYH*CVFLII
Trigger: AATTATTAGGAACACACATCAGTGGTACATGCCATG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCATGGCATGTACCACTaGTGTGTGTTCCTAATAATT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAHGMYH*CVFLII
Trigger: AATTATTAGGAACACACATCAGTGGTACATGCCATG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTACAAATGTGAGTCCTaGGAGCAACACATAAGGATT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAYKCES*EQHIRI
Trigger: AATCCTTATGTGTTGCTCTCAGGACTCACATTTGTA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTACAAAATTTCACAGATaGGGCCTATGGAAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDATKFHR*GLWKKN
Trigger: GTTCTTCTTCCATAGGCCTCATCTGTGAAATTTTGT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTGGAAGCCAATTCAATaGTTACTACTAGGACATGGA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAWKPIQ*LLLGHG
Trigger: TCCATGTCCTAGTAGTAATCATTGAATTGGCTTCCA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATAGCTCTAGCTGCCTCTaGCGCGGCAGCCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHSSSCL*RGSHLF
Trigger: GAAGAGGTGGCTGCCGCGGCAGAGGCAGCTAGAGCT...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTGCCCACAGCCACACGTaGACCAAGAGCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRAHSHT*TKSQSR
Trigger: CCTGCTCTGGCTCTTGGTGCACGTGTGGCTGTGGGC...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTATGCCGGTGTCCGGGTaGACGTGGAAGTCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRMPVSG*TWKSSS
Trigger: GCTGGACGACTTCCACGTGCACCCGGACACCGGCAT...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTACGCGAATCTCCACCTaGACCACAGCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCTRIST*TTAPSS
Trigger: GCTGCTGGGCGCTGTGGTGCAGGTGGAGATTCGCGT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAACGCGAATCTCCACCTaGACCACAGCGCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRTRIST*TTAPSS
Trigger: GCTGCTGGGCGCTGTGGTGCAGGTGGAGATTCGCGT...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCATCGGCCGCCGTCCCATaGCTCGATCTGCAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEASAAVP*LDLQPV
Trigger: CACCGGCTGCAGATCGAGGCATGGGACGGCGGCCGA...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCTGGTGCCAGGCCTGTaGCTCGCGGTCCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLLVPGL*LAVQRS
Trigger: AGACCTCTGGACCGCGAGGCACAGGCCTGGCACCAG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTCCACCACCAACTGGTaGCAGGCCTGTGCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLSTTNW*QACASR
Trigger: CCGCGAGGCACAGGCCTGGCACCAGTTGGTGGTGGA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTTCCACCACCAACTGGTaGCAGGCCTGTGCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSSTTNW*QACASR
Trigger: CCGCGAGGCACAGGCCTGGCACCAGTTGGTGGTGGA...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCAAGGACAGAGAGATaGTCCCGTCTCCAAGACCCA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPRTER*SRLQDP
Trigger: TGGGTCTTGGAGACGGGAGCATCTCTCTGTCCTTGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGCGTGATCACTGCCTaGCTCGTCGGCATCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGVITA*LVGIGG
Trigger: GCCTCCGATGCCGACGAGGCAGGCAGTGATCACGCC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGCCAGGCGTGATCACTaGCTGCCTCGTCGGCATCGG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIARRDH*LPRRHR
Trigger: CCGATGCCGACGAGGCAGGCAGTGATCACGCCTGGC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATGTCCAACCGGGGCATaGTCTGCAATGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKCPTGA*SAMVAL
Trigger: CAATGCCACCATTGCAGAGCATGCCCCGGTTGGACA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATGTCCAACCGGGGCATaGTCTGCAATGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILCPTGA*SAMVAL
Trigger: CAATGCCACCATTGCAGAGCATGCCCCGGTTGGACA...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCGAGGTACAAGGCTGTaGCAGGGGGCGTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLRGTRL*QGAWSG
Trigger: CCCAGACCACGCCCCCTGGCACAGCCTTGTACCTCG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGCAAAGACGCCTGGCTaGGGGCTGGCGATGGAGTAC +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHAKTPG*GLAMEY
Trigger: GTACTCCATCGCCAGCCCGCAGCCAGGCGTCTTTGC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCCTAAGAGGCGAGGCTaGACGCTGGGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSPKRRG*TLGAKW
Trigger: CCACTTGGCCCCCAGCGTGCAGCCTCGCCTCTTAGG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATTCATGGTGCCCCCGGTaGTCACGATCCAGTGCCACC +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHSWCPR*SRSSAT
Trigger: GGTGGCACTGGATCGTGAGCACCGGGGGCACCATGA...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTCATGGTGCCCCCGGTaGTCACGATCCAGTGCCACC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSWCPR*SRSSAT
Trigger: GGTGGCACTGGATCGTGAGCACCGGGGGCACCATGA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTATCCTGTATCAAGACTaGTACTTTGCAATAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAILYQD*YFAIGS
Trigger: AGAGCCTATTGCAAAGTAGCAGTCTTGATACAGGAT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGCTGCTGGCGAACACTaGCAAGGGTGTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKAAGEH*QGCSFR
Trigger: TCTGAAGGAACACCCTTGGCAGTGTTCGCCAGCAGC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGAATGCCAGGCATATaGAAATGTTCATCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGMPGI*KCSSFS
Trigger: ACTAAAGGATGAACATTTGCATATGCCTGGCATTCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAAACCACATAAATATTaGGAGTATCAATCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAKPHKY*EYQSWP
Trigger: GGGCCAGGATTGATACTCGCAATATTTATGTGGTTT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGGTGTCCGGGTGCACGTaGAAGTCGTCCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLVSGCT*KSSSSG
Trigger: CCCGCTGCTGGACGACTTCCACGTGCACCCGGACAC...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCAGCGCCCAGCAGCGTaGCGGCGACGAAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIQRPAA*RRRSCS
Trigger: ACTACAGCTTCGTCGCCGCCACGCTGCTGGGCGCTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCAGCGCCCAGCAGCGTaGCGGCGACGAAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLQRPAA*RRRSCS
Trigger: ACTACAGCTTCGTCGCCGCCACGCTGCTGGGCGCTG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCACGGATCGTGGGCAACTaGCAGGCGGAAGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEARIVGN*QAEGGP
Trigger: GGGACCGCCTTCCGCCTGCCAGTTGCCCACGATCCG...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGGCCTGCGGGGTCCTTaGGCAGGTCGGACGGTTGCA +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHGLRGP*AGRTVA
Trigger: TGCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGCCTGCGGGGTCCTTaGGCAGGTCGGACGGTTGCA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGLRGP*AGRTVA
Trigger: TGCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATAGCGCACGAAGCCATTaGGCCCCAGGTCGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHSARSH*APGRGR
Trigger: CCGACCGCGACCTGGGGCCCAATGGCTTCGTGCGCT...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTCACCAAGCTCCCCTGTaGCCTCATCTTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFHQAPL*PHLPSP
Trigger: GGGAGAAGGAAGATGAGGCCACAGGGGAGCTTGGTG...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGGCTCTCCGAGGTCCTaGGCCACCACTTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHGSPRS*ATTFSS
Trigger: GGAGCTGAAAGTGGTGGCCCAGGACCTCGGAGAGCC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGCTCTCCGAGGTCCTaGGCCACCACTTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGSPRS*ATTFSS
Trigger: GGAGCTGAAAGTGGTGGCCCAGGACCTCGGAGAGCC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGCAGGTGGCAGAGAGTaGGGGCTCTCCGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSAGGRE*GLSEVL
Trigger: CAGGACCTCGGAGAGCCCCCACTCTCTGCCACCTGC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGGGCATGCTCTGCAATaGTGGCATTGTACACCTGCC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLGHALQ*WHCTPA
Trigger: GGCAGGTGTACAATGCCACCATTGCAGAGCATGCCC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAATCTCGGTGCCTGGCTaGGTCTCATCACTGATGCTC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKISVPG*VSSLML
Trigger: GAGCATCAGTGATGAGACCCAGCCAGGCACCGAGAT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCATGGTGGCGTTTCGTaGTGGGGAGCCGCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCHGGVS*WGAAVC
Trigger: ACAGACCGCGGCTCCCCACCACGAAACGCCACCATG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAGAGGAGGCACTCCCTaGTCAGTGGCAATGACACTC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKRGGTP*SVAMTL
Trigger: GAGTGTCATTGCCACTGACCAGGGAGTGCCTCCTCT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCCAATCTCGAGTTGCTaGCTTGAAAACATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDPISSC*LENILF
Trigger: GAACAAAATGTTTTCAAGCCAGCAACTCGAGATTGG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGTTCACTGTGTCCTTTaGAAGTCTAATCATACAGAC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAVHCVL*KSNHTD
Trigger: GTCTGTATGATTAGACTTCCAAAGGACACAGTGAAC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTTACATCTGCAACTGGTaGAAGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLYICNW*KRPLPA
Trigger: TGCAGGCAGAGGACGCTTTCACCAGTTGCAGATGTA...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATACATCTGCAACTGGTaGAAGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILYICNW*KRPLPA
Trigger: TGCAGGCAGAGGACGCTTTCACCAGTTGCAGATGTA...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTGTAGCCCTGAGTGCTaGACAGTCCGGCGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCCSPEC*TVRRPD
Trigger: ATCCGGACGCCGGACTGTTCAGCACTCAGGGCTACA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTGTAGCCCTGAGTGCTaGACAGTCCGGCGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRCSPEC*TVRRPD
Trigger: ATCCGGACGCCGGACTGTTCAGCACTCAGGGCTACA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATCGCGGCCTCGGACACTaGGGCCTTGTAATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHRGLGH*GLVMLL
Trigger: CAACAGCATTACAAGGCCTCAGTGTCCGAGGCCGCG...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCGATGGAGTACCGGATaGGTCCGTTCCGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRWSTG*VRSAHC
Trigger: ACAGTGGGCGGAACGGACTCATCCGGTACTCCATCG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTACCAGCAGGGCTGCCTaGGGATGCACGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSTSRAA*GCTPWS
Trigger: GGACCAAGGCGTGCATCCTCAGGCAGCCCTGCTGGT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCGTCAATCTTAAAGTaGTCAGAACTATCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAASILK*SELSSE
Trigger: TTCAGAAGATAGTTCTGATCACTTTAAGATTGACGC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAAATGTCTAATATTCTaGGACATGATTGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDKCLIF*DMIALP
Trigger: AGGGAGAGCAATCATGTCTCAGAATATTAGACATTT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTACAGACAACAGGTCTaGCAGAATATACACTACTTA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDYRQQV*QNIHYL
Trigger: TAAGTAGTGTATATTCTGTCAGACCTGTTGTCTGTA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGCGCGGTACTCGTCCTaGTCAAAGACCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIARYSS*SKTGGL
Trigger: CAACCCGCCGGTCTTTGAGCAGGACGAGTACCGCGC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGCCAGGCGTGATCACTaGCTGCCTCGTCGGCATCGG +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAARRDH*LPRRHR
Trigger: CCGATGCCGACGAGGCAGGCAGTGATCACGCCTGGC...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAGCAGGGAGCCGAGATTaGAGGGAGCCGAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRAGSRD*REPRVG
Trigger: TCCAACTCTCGGCTCCCTGCAATCTCGGCTCCCTGC...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAACCGGGGCATGCTCTaGAATGGTGGCATTGTACAC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLNRGML*NGGIVH
Trigger: GTGTACAATGCCACCATTGCAGAGCATGCCCCGGTT...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAACCGGGGCATGCTCTaGAATGGTGGCATTGTACAC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKNRGML*NGGIVH
Trigger: GTGTACAATGCCACCATTGCAGAGCATGCCCCGGTT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTCCGGAATGCCTGAGGTaGTTCATAGCTCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLPECLR*FIAQES
Trigger: GGATTCCTGAGCTATGAAGCACCTCAGGCATTCCGG...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCGGAATGCCTGAGGTaGTTCATAGCTCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPECLR*FIAQES
Trigger: GGATTCCTGAGCTATGAAGCACCTCAGGCATTCCGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCGAGGTACAAGGCTGTaGCAGGGGGCGTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSRGTRL*QGAWSG
Trigger: CCCAGACCACGCCCCCTGGCACAGCCTTGTACCTCG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCCTAAGAGGCGAGGCTaGACGCTGGGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSPKRRG*TLGAKW
Trigger: CCACTTGGCCCCCAGCGTGCAGCCTCGCCTCTTAGG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTCATGGTGCCCCCGGTaGTCACGATCCAGTGCCACC +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLSWCPR*SRSSAT
Trigger: GGTGGCACTGGATCGTGAGCACCGGGGGCACCATGA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTTCATCAGGATCCTTTaGAAACACAGTTGTAACCAA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAFIRIL*KHSCNQ
Trigger: TTGGTTACAACTGTGTTTGCAAAGGATCCTGATGAA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCCTGGTAAAGTCAGGTaGATTATTTCTTTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDPGKVR*IISFAK
Trigger: TTTGGCAAAAGAAATAATGCACCTGACTTTACCAGG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAACAATAAACTCTGGTaGGTGATCGTTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDNNKLW*VIVFIF
Trigger: GAAGATGAAAACGATCACGCACCAGAGTTTATTGTT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACACGGTCGAGGGTGTTaGTGGTTTTCAATGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKHGRGC*WFSMCL
Trigger: CAGGCACATTGAAAACCAGCAACACCCTCGACCGTG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACATTCTTGGTGGGACTaGTTTAATCCCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKHSWWD*FNPRLG
Trigger: GCCCAGCCTGGGATTAAAGCAGTCCCACCAAGAATG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCTGCCTGACCGCCCATaGGGTGTATCTCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSLPDRP*GVSLLP
Trigger: CGGGAGGAGAGATACACCCCATGGGCGGTCAGGCAG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTGCCTGACCGCCCATaGGGTGTATCTCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILPDRP*GVSLLP
Trigger: CGGGAGGAGAGATACACCCCATGGGCGGTCAGGCAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCACGTCCAGCACGGCGATaGACACGCGCACCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEARPARR*TRAPWQ
Trigger: TTGCCACGGTGCGCGTGTCCATCGCCGTGCTGGACG...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGGACCCCGCGTCCGTaGCCACCAGTAGTAACTCAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGTPRP*PPVVTH
Trigger: ATGAGTTACTACTGGTGGCCACGGACGCGGGGTCCC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTGGGACCCCGCGTCCGTaGCCACCAGTAGTAACTCAT +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRGTPRP*PPVVTH
Trigger: ATGAGTTACTACTGGTGGCCACGGACGCGGGGTCCC...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGGCTCTCCGAGGTCCTaGGCCACCACTTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSGSPRS*ATTFSS
Trigger: GGAGCTGAAAGTGGTGGCCCAGGACCTCGGAGAGCC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGCAGGTGGCAGAGAGTaGGGGCTCTCCGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSAGGRE*GLSEVL
Trigger: CAGGACCTCGGAGAGCCCCCACTCTCTGCCACCTGC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGCTCACCAGGCAGGTaGCAGAGAGTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHICSPGR*QRVGAL
Trigger: GAGAGCCCCCACTCTCTGCCACCTGCCTGGTGAGCA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGATGGCAAAGACGCCTaGCTGCGGGCTGGCGATGGA +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSDGKDA*LRAGDG
Trigger: TCCATCGCCAGCCCGCAGCCAGGCGTCTTTGCCATC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCCAGGGCTCTGTCGATaGCAAAGACGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIPGLCR*QRRLAA
Trigger: CGCAGCCAGGCGTCTTTGCCATCGACAGAGCCCTGG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGTGGCGTTTCGTGGTaGGGAGCCGCGGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGGVSW*GAAVCH
Trigger: GTGACAGACCGCGGCTCCCCACCACGAAACGCCACC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCATGGTGGCGTTTCGTaGTGGGGAGCCGCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLHGGVS*WGAAVC
Trigger: ACAGACCGCGGCTCCCCACCACGAAACGCCACCATG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCGTAAACCGCCATGGTaGCGTTTCGTGGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRKPPW*RFVVGS
Trigger: GCTCCCCACCACGAAACGCCACCATGGCGGTTTACG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTTTTCCAGGGAGACACTaGGGGAAGAAGGGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLFPGRH*GKKGLL
Trigger: TAACAGGCCCTTCTTCCCCCAGTGTCTCCCTGGAAA...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGTGCTGCTTAAATACTaGAGCTTCATCATTTACATC +
Preference number: 4 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDVLLKY*SFIIYI
Trigger: GATGTAAATGATGAAGCTCCAGTATTTAAGCAGCAC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTGCTCATTTATCCTCTaGATTTCCTTATCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDACSFIL*ISLSSA
Trigger: TGCAGAAGATAAGGAAATCCAGAGGATAAATGAGCA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGTAGCCCTGAGTGCTaGACAGTCCGGCGTCCGGAT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHICSPEC*TVRRPD
Trigger: ATCCGGACGCCGGACTGTTCAGCACTCAGGGCTACA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCGCGGCCTCGGACACTaGGGCCTTGTAATGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIRGLGH*GLVMLL
Trigger: CAACAGCATTACAAGGCCTCAGTGTCCGAGGCCGCG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGATCTCATCCGAGGTCCTaGGGAACGCTGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRSHPRS*GTLGGC
Trigger: ACAACCACCCAGCGTTCCTCAGGACCTCGGATGAGA...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCGATGGAGTACCGGATaGGTCCGTTCCGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSRWSTG*VRSAHC
Trigger: ACAGTGGGCGGAACGGACTCATCCGGTACTCCATCG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATATTTGTGCTGTCAGTaGTCTCAGTCGCCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKYLCCQ*SQSPVC
Trigger: ACAGACCGGCGACTGAGATCACTGACAGCACAAATA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATGTCAAAGTCTGGGATaGAGAAAGTGCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKCQSLG*RKCWCA
Trigger: GGCACACCAGCACTTTCTTCATCCCAGACTTTGACA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGATAGCTCAGGCTGCTaGAGTTTGGGGGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKDSSGC*SLGDCH
Trigger: ATGACAATCCCCCAAACTTCAGCAGCCTGAGCTATC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAGGGATGAGAATCTGTaGGGGATTCCCAGGCTTATC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKRDENL*GIPRLI
Trigger: GATAAGCCTGGGAATCCCTCACAGATTCTCATCCCT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGGCAGCCACCTCTTCTaGCCCTGGATTTCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLGSHLF*PWISLN
Trigger: GTTTAAAGAAATCCAGGGGCAGAAGAGGTGGCTGCC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGAAGTAAGCTCTAGCTaGCTCTGCCGCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIEVSSS*LCRGSH
Trigger: GTGGCTGCCGCGGCAGAGGCAGCTAGAGCTTACTTC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGGAAGTAAGCTCTAGCTaGCTCTGCCGCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLEVSSS*LCRGSH
Trigger: GTGGCTGCCGCGGCAGAGGCAGCTAGAGCTTACTTC...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAAAGCGTCCTCTGCCTaGAGCTCACGCAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCKASSA*SSRRQG
Trigger: TCCCTGTCTGCGTGAGCTGCAGGCAGAGGACGCTTT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGTGAAAGCGTCCTCTaGCTGCAGCTCACGCAGACA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGESVL*LQLTQT
Trigger: TGTCTGCGTGAGCTGCAGGCAGAGGACGCTTTCACC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAGGTGAAAGCGTCCTCTaGCTGCAGCTCACGCAGACA +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRGESVL*LQLTQT
Trigger: TGTCTGCGTGAGCTGCAGGCAGAGGACGCTTTCACC...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGGCTCTCGGGTAACTaGCAGCTTGTGGCAGGATCG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRLSGN*QLVAGS
Trigger: CGATCCTGCCACAAGCTGGCAGTTACCCGAGAGCCT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGCCCACAGCCACACGTaGACCAAGAGCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSAHSHT*TKSQSR
Trigger: CCTGCTCTGGCTCTTGGTGCACGTGTGGCTGTGGGC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTCGGAGACGTCGAGTTaGAGGGAGTCGAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRSETSS*RESRGK
Trigger: CTTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGCGCGGTACTCGTCCTaGTCAAAGACCGGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHARYSS*SKTGGL
Trigger: CAACCCGCCGGTCTTTGAGCAGGACGAGTACCGCGC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTAGGGTCGATCCGGAATaGCTGAGGTGCTTCATAGCT +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFRVDPE*LRCFIA
Trigger: AGCTATGAAGCACCTCAGGCATTCCGGATCGACCCT...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATTCTGTCTTCCGCACGTaGGAGGTACAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHSVFRT*EVQGCA
Trigger: GGCACAGCCTTGTACCTCGCACGTGCGGAAGACAGA...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTCTGTCTTCCGCACGTaGGAGGTACAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSVFRT*EVQGCA
Trigger: GGCACAGCCTTGTACCTCGCACGTGCGGAAGACAGA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGTAGTGCTCACATTTTaGAAGAATCCGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKVVLTF*KNPSSG
Trigger: CCCCGAGGACGGATTCTTGCAAAATGTGAGCACTAC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAACAGTCATCTCATGGTaGCCCCGGTGCTCACGATCC +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRTVISW*PRCSRS
Trigger: GGATCGTGAGCACCGGGGGCACCATGAGATGACTGT...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTCATGGCTAGCACTTaGTTCTCTGTCCAGACTGTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLMAST*FSVQTV
Trigger: CACAGTCTGGACAGAGAAGCAAGTGCTAGCCATGAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGCAGCCACTGTCAGATaGCAGAATGACAAGCTCATG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKAATVR*QNDKLM
Trigger: CATGAGCTTGTCATTCTGGCATCTGACAGTGGCTGC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCACCAAGCTCCCCTGTaGCCTCATCTTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCHQAPL*PHLPSP
Trigger: GGGAGAAGGAAGATGAGGCCACAGGGGAGCTTGGTG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGACACCAAGCTCCCCTGTaGCCTCATCTTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRHQAPL*PHLPSP
Trigger: GGGAGAAGGAAGATGAGGCCACAGGGGAGCTTGGTG...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGGGACCCCGCGTCCGTaGCCACCAGTAGTAACTCAT +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSGTPRP*PPVVTH
Trigger: ATGAGTTACTACTGGTGGCCACGGACGCGGGGTCCC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTAGCTCCACCGCCTCCTaGACCTCTCGGTCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSSSTAS*TSRSRV
Trigger: GACTCTAGACCGAGAGGTCCAGGAGGCGGTGGAGCT...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGAGCTCCACCGCCTCCTaGACCTCTCGGTCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLSSTAS*TSRSRV
Trigger: GACTCTAGACCGAGAGGTCCAGGAGGCGGTGGAGCT...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTCTGAGGAACGCTGGGTaGTTGTCATTGACATCCATG +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLLRNAG*LSLTSM
Trigger: CATGGATGTCAATGACAACCACCCAGCGTTCCTCAG...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTGAGGAACGCTGGGTaGTTGTCATTGACATCCATG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLRNAG*LSLTSM
Trigger: CATGGATGTCAATGACAACCACCCAGCGTTCCTCAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTCCAGGGGGCGTGGTCTaGGATATTCTAATCTCATCC +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFPGGVV*DILISS
Trigger: GGATGAGATTAGAATATCCCAGACCACGCCCCCTGG...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCACCAGGGCTCTGTCGATaGCAAAGACGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAPGLCR*QRRLAA
Trigger: CGCAGCCAGGCGTCTTTGCCATCGACAGAGCCCTGG...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCCAGGGCTCTGTCGATaGCAAAGACGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSPGLCR*QRRLAA
Trigger: CGCAGCCAGGCGTCTTTGCCATCGACAGAGCCCTGG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCCAGGGCTCTGTCGATaGCAAAGACGCCTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHPGLCR*QRRLAA
Trigger: CGCAGCCAGGCGTCTTTGCCATCGACAGAGCCCTGG...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTACGCTGGGGGCCAAGTaGGTGCGCCTGTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSTLGAK*VRLCLQ
Trigger: CTGCAAACACAGGCGCACCCACTTGGCCCCCAGCGT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAACGCTGGGGGCCAAGTaGGTGCGCCTGTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEATLGAK*VRLCLQ
Trigger: CTGCAAACACAGGCGCACCCACTTGGCCCCCAGCGT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTTTGCCTATTACCCCTTaGGGAACAGGGCTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFLPITP*GTGLSS
Trigger: CGAAGAGAGCCCTGTTCCCCAAGGGGTAATAGGCAA...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCATGGTGGCGTTTCGTaGTGGGGAGCCGCGGTCTGT +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHHGGVS*WGAAVC
Trigger: ACAGACCGCGGCTCCCCACCACGAAACGCCACCATG...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGACGTAAACCGCCATaGTGGCGTTTCGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRRKPP*WRFVVG
Trigger: CCCCACCACGAAACGCCACCATGGCGGTTTACGTCT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGGTCGAGGGTGTTGCTaGTTTTCAATGTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKGRGCC*FSMCLT
Trigger: TGTCAGGCACATTGAAAACCAGCAACACCCTCGACC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAACAATGACAGTTGTCTaGTTTGTAGGCGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKTMTVV*FVGDSG
Trigger: CCCCGAGTCGCCTACAAACCAGACAACTGTCATTGT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTATCTTGAGAAAACACTaGTGGATTATCATTGACATC +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAILRKH*WIIIDI
Trigger: GATGTCAATGATAATCCACCAGTGTTTTCTCAAGAT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTACTTGGAATCTGATTTaGGACTATGAGCGATTATTT +
Preference number: 4 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDATWNLI*DYERLF
Trigger: AAATAATCGCTCATAGTCCCAAATCAGATTCCAAGT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCTTCCACAGAACAGTaGCCACTGGAGTTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPSTEQ*PLEFEC
Trigger: ACACTCAAACTCCAGTGGCCACTGTTCTGTGGAAGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCGGGATACCCGAGTCTaGCACCCTGGACTCGTGGTC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSRDTRV*HPGLVV
Trigger: GACCACGAGTCCAGGGTGCCAGACTCGGGTATCCCG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGGGATGGGAGAGCGTaGGTGTTTCGGAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGDGRA*VFRRHL
Trigger: CAGGTGCCTCCGAAACACCCACGCTCTCCCATCCCC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGGGAGTCATGCCTTCTaGCAGAGAACCAAGATGGTA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKGSHAF*QRTKMV
Trigger: TACCATCTTGGTTCTCTGCCAGAAGGCATGACTCCC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAGGTCATTCACGTCGTTaGCGCGAATCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRGHSRR*RESPPA
Trigger: TGCAGGTGGAGATTCGCGTCAACGACGTGAATGACC...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTGGTCATTCACGTCGTTaGCGCGAATCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRGHSRR*RESPPA
Trigger: TGCAGGTGGAGATTCGCGTCAACGACGTGAATGACC...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCGACGCCTCCCTCTGTaGGAAAGAGCACGTGAATTG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRRLPL*ERAREL
Trigger: CAATTCACGTGCTCTTTCTCACAGAGGGAGGCGTCG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATGTAATGCTGTTGGCTaGAGAGAGGTGGTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILCNAVG*REVVGH
Trigger: ATGACCAACCACCTCTCTTCAGCCAACAGCATTACA...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAAAAGCCATAGAGTCCTaGATCTGCATCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILKAIES*ICIRGC
Trigger: ACAGCCTCTGATGCAGATTCAGGACTCTATGGCTTT...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTCAGATTTGCCCATCATaGGGGTCGATCCGGAATGCC +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRQICPS*GSIRNA
Trigger: GGCATTCCGGATCGACCCTCATGATGGGCAAATCTG...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGCTCGTCACATAGGTTaGTGGGTTAAACACAGGATG +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLARHIG*WVKHRM
Trigger: CATCCTGTGTTTAACCCATCAACCTATGTGACGAGC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATAGCCCACCACCGTCTTaGGCAGAGACCATCAACGAA +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHSPPPS*AETINE
Trigger: TTCGTTGATGGTCTCTGCTCAAGACGGTGGTGGGCT...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTCTCATCCGAGGTCCTaGGGAACGCTGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISHPRS*GTLGGC
Trigger: ACAACCACCCAGCGTTCCTCAGGACCTCGGATGAGA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACATTTGTGTCATCGGTaGGAGAGACTCACTGACTTC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKHLCHR*ERLTDF
Trigger: GAAGTCAGTGAGTCTCTCTCACCGATGACACAAATG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGCAGATCTAGAGAACTaGCCAGATTCAGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLADLEN*PDSGQD
Trigger: ATCCTGACCTGAATCTGGTCAGTTCTCTAGATCTGC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAAGGAGGAGATTATATaGAGCGCGCACACACAAGGA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKKEEII*SAHTQG
Trigger: TCCTTGTGTGTGCGCGCTTCATATAATCTCCTCCTT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTTGGAATTGACTCCTaGATCTCTGTCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLGIDS*ISVQSF
Trigger: GAAGCTCTGGACAGAGATTCAGGAGTCAATTCCAAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGATGATTTCTGCATGTaGCCCTGTGTCACGGTCATT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKDDFCM*PCVTVI
Trigger: AATGACCGTGACACAGGGTCACATGCAGAAATCATC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTTTTCTGGAAGGCTTTaGGCACACTGGCATCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCFSGRL*AHWHPG
Trigger: CCCGGGATGCCAGTGTGCTCAAAGCCTTCCAGAAAA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAAAGCGTCCTCTGCCTaGAGCTCACGCAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIKASSA*SSRRQG
Trigger: TCCCTGTCTGCGTGAGCTGCAGGCAGAGGACGCTTT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGAAAGCGTCCTCTGCCTaGAGCTCACGCAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLKASSA*SSRRQG
Trigger: TCCCTGTCTGCGTGAGCTGCAGGCAGAGGACGCTTT...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGGTGAAAGCGTCCTCTaGCTGCAGCTCACGCAGACA +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSGESVL*LQLTQT
Trigger: TGTCTGCGTGAGCTGCAGGCAGAGGACGCTTTCACC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTCGGAGACGTCGAGTTaGAGGGAGTCGAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLSETSS*RESRGK
Trigger: CTTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTCGGAGACGTCGAGTTaGAGGGAGTCGAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISETSS*RESRGK
Trigger: CTTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGACCAAGGACAGAGAGATaGTCCCGTCTCCAAGACCCA +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRPRTER*SRLQDP
Trigger: TGGGTCTTGGAGACGGGAGCATCTCTCTGTCCTTGG...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGCAGGGAGCCGAGATTaGAGGGAGCCGAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSAGSRD*REPRVG
Trigger: TCCAACTCTCGGCTCCCTGCAATCTCGGCTCCCTGC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTGTCCAACCGGGGCATaGTCTGCAATGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCCPTGA*SAMVAL
Trigger: CAATGCCACCATTGCAGAGCATGCCCCGGTTGGACA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTGGGGGCCAAGTGGGTaGGCCTGTGTTTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLWGPSG*ACVCSI
Trigger: AATGCTGCAAACACAGGCGCACCCACTTGGCCCCCA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGGGGGCCAAGTGGGTaGGCCTGTGTTTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIWGPSG*ACVCSI
Trigger: AATGCTGCAAACACAGGCGCACCCACTTGGCCCCCA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTACAGTCATCTCATGGTaGCCCCGGTGCTCACGATCC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHITVISW*PRCSRS
Trigger: GGATCGTGAGCACCGGGGGCACCATGAGATGACTGT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTCGACTGCTTCCCAAATaGTGTTTTTCCCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLRLLPK*CFSLQR
Trigger: CCTCTGAAGGGAAAAACAGCATTTGGGAAGCAGTCG...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACACAGCCTGATCAGATaGTGTTACTGTCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKHSLIR*CYCQDD
Trigger: GTCATCCTGACAGTAACAGCATCTGATCAGGCTGTG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTGAGGCTTCCACTCTaGCAATCAACTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLRLPL*QSTVCL
Trigger: AAGACAGACAGTTGATTGGCAGAGTGGAAGCCTCAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCCCAGGCTGGGCTACTaGTGTTATCAAAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIPRLGY*CYQRGW
Trigger: CCACCCCCTTTGATAACAGCAGTAGCCCAGCCTGGG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTGTTTCGGAGGCACCTaGCCCAGGTTTACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSCFGGT*PRFTAG
Trigger: GCCGGCAGTAAACCTGGGGCAGGTGCCTCCGAAACA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGTAACTGCCAGCTTGTaGCAGGATCGCAGAAAAATC +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILVTASL*QDRRKI
Trigger: GATTTTTCTGCGATCCTGCCACAAGCTGGCAGTTAC...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTCTCCTCCAGCTCCTTaGGAAGGCTCTCGGGTAACT +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRSPPAP*EGSRVT
Trigger: AGTTACCCGAGAGCCTTCCCAAGGAGCTGGAGGAGA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGTGAGGTTGAACAACTaGGCAGAGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAVRLNN*AEEPEA
Trigger: GGCCTCGGGCTCCTCTGCCCAGTTGTTCAACCTCAC...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGTGAGGTTGAACAACTaGGCAGAGGAGCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSVRLNN*AEEPEA
Trigger: GGCCTCGGGCTCCTCTGCCCAGTTGTTCAACCTCAC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGAAAGCGGGGCGAGTaGTCATTCACGTCGTTGACG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGKRGE*SFTSLT
Trigger: CGTCAACGACGTGAATGACCACTCGCCCCGCTTTCC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAATCAATGGCAAAAGATaGTCCACACTCTGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKINGKR*STLCGV
Trigger: CACACCGCAGAGTGTGGACCATCTTTTGCCATTGAT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAGCTCCACCGCCTCCTaGACCTCTCGGTCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSSTAS*TSRSRV
Trigger: GACTCTAGACCGAGAGGTCCAGGAGGCGGTGGAGCT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTACCTGCCTCCAGAAGATaGGCTCATTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILPASRR*AHCHSH
Trigger: ATGTGAATGACAATGAGCCCATCTTCTGGAGGCAGG...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCTGCCTCCAGAAGATaGGCTCATTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPASRR*AHCHSH
Trigger: ATGTGAATGACAATGAGCCCATCTTCTGGAGGCAGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGAGATCATAGGTAGCTaGATCCCTTTCCCTGTCGAT +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLEIIGS*IPFPVD
Trigger: ATCGACAGGGAAAGGGATCCAGCTACCTATGATCTC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATACACGAACAAAGGCTTaGGCACTTAGCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHTRTKA*ALSPPP
Trigger: TGGGGGTGGGCTAAGTGCCCAAGCCTTTGTTCGTGT...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTACACGAACAAAGGCTTaGGCACTTAGCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCTRTKA*ALSPPP
Trigger: TGGGGGTGGGCTAAGTGCCCAAGCCTTTGTTCGTGT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAGGACGACACGTTTCCTaGAATAAGCTCATAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILGRHVS*NKLISH
Trigger: GTGGCTTATGAGCTTATTCCAGGAAACGTGTCGTCC...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAACACCAGGGTTCCTATaGGAACATTCTCCTCTACAC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKTPGFL*EHSPLH
Trigger: GTGTAGAGGAGAATGTTCCCATAGGAACCCTGGTGT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGACCCGTGGTTGTCCTaGCTGGAATGCCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSDPWLS*LECPGL
Trigger: CAGACCAGGGCATTCCAGCCAGGACAACCACGGGTC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTCAACCATTCCGGAGTaGCATCCACAGGGACCACCT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSTIPE*HPQGPP
Trigger: AGGTGGTCCCTGTGGATGCCACTCCGGAATGGTTGA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCAAGATGGTAGGGGATaGGAGAGCGTGGGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCQDGRG*ESVGVS
Trigger: CGAAACACCCACGCTCTCCCATCCCCTACCATCTTG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTACATCTGCAACTGGTaGAAGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCYICNW*KRPLPA
Trigger: TGCAGGCAGAGGACGCTTTCACCAGTTGCAGATGTA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCGACGCCTCCCTCTGTaGGAAAGAGCACGTGAATTG +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSRRLPL*ERAREL
Trigger: CAATTCACGTGCTCTTTCTCACAGAGGGAGGCGTCG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGAGGTGGTTGGTCATTaGGGTCAGCGACCCGGAGTA +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAEVVGH*GQRPGV
Trigger: TACTCCGGGTCGCTGACCTCAATGACCAACCACCTC...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTGGTGTGGACCATCTTTaGTTGCAGGGAGCCGAGATT +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRGVDHL*LQGAEI
Trigger: AATCTCGGCTCCCTGCAATCAAAGATGGTCCACACC...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCAGATTTGCCCATCATaGGGGTCGATCCGGAATGCC +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSQICPS*GSIRNA
Trigger: GGCATTCCGGATCGACCCTCATGATGGGCAAATCTG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCAGATTTGCCCATCATaGGGGTCGATCCGGAATGCC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIQICPS*GSIRNA
Trigger: GGCATTCCGGATCGACCCTCATGATGGGCAAATCTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGCTGGGTCTCATCACTaGTGCTCGTCACATAGGTTG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHAGSHH*CSSHRL
Trigger: CAACCTATGTGACGAGCATCAGTGATGAGACCCAGC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCTCATCCGAGGTCCTaGGGAACGCTGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSHPRS*GTLGGC
Trigger: ACAACCACCCAGCGTTCCTCAGGACCTCGGATGAGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAATTGATGTCAGTAACTaGGACGTAAACCGCCATGGT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKIDVSN*DVNRHG
Trigger: ACCATGGCGGTTTACGTCTCAGTTACTGACATCAAT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTACAGTGGTGCTTCGTaGACCCTGGATGCTACAGTC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCYSGAS*TLDATV
Trigger: GACTGTAGCATCCAGGGTTCACGAAGCACCACTGTA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCTCCTTCCATGTGAATaGCCAAGAGACCCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLLPCE*PRDPWL
Trigger: CAACCACGGGTCTCTTGGTCATTCACATGGAAGGAG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCAGGAAGAGGACTTCTaGACCACCATCGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCQEEDF*TTIVRM
Trigger: CATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTACCTGGCCCTCATGCTaGCCACAGGAAGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSTWPSC*PQEEDF
Trigger: GAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAGGT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATAGGCTCTCGGGTAACTaGCAGCTTGTGGCAGGATCG +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHRLSGN*QLVAGS
Trigger: CGATCCTGCCACAAGCTGGCAGTTACCCGAGAGCCT...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTTGTCCAACCGGGGCATaGTCTGCAATGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSCPTGA*SAMVAL
Trigger: CAATGCCACCATTGCAGAGCATGCCCCGGTTGGACA...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTCAGAGGCTGTCACCTaGAGAAAGCAGTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRSEAVT*RKQCPT
Trigger: GGTTGGACACTGCTTTCTGCAGGTGACAGCCTCTGA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTCAGAGGCTGTCACCTaGAGAAAGCAGTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSEAVT*RKQCPT
Trigger: GGTTGGACACTGCTTTCTGCAGGTGACAGCCTCTGA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCCGGAATGCCTGAGGTaGTTCATAGCTCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCPECLR*FIAQES
Trigger: GGATTCCTGAGCTATGAAGCACCTCAGGCATTCCGG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGACCGGAATGCCTGAGGTaGTTCATAGCTCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRPECLR*FIAQES
Trigger: GGATTCCTGAGCTATGAAGCACCTCAGGCATTCCGG...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGGGTCGATCCGGAATaGCTGAGGTGCTTCATAGCT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRVDPE*LRCFIA
Trigger: AGCTATGAAGCACCTCAGGCATTCCGGATCGACCCT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCATCTGTCTTCCGCACGTaGGAGGTACAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEASVFRT*EVQGCA
Trigger: GGCACAGCCTTGTACCTCGCACGTGCGGAAGACAGA...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTGGGGGCCAAGTGGGTaGGCCTGTGTTTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSWGPSG*ACVCSI
Trigger: AATGCTGCAAACACAGGCGCACCCACTTGGCCCCCA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTCGACTGCTTCCCAAATaGTGTTTTTCCCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFRLLPK*CFSLQR
Trigger: CCTCTGAAGGGAAAAACAGCATTTGGGAAGCAGTCG...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGAGGCTTCATACAGGTaGTGCTTAAATACTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKEASYR*CLNTGA
Trigger: AGCTCCAGTATTTAAGCAGCACCTGTATGAAGCCTC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCAAGACTGCTACTTTaGAATAGGCTCTATGCCCAC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSRLLL*NRLYAH
Trigger: GTGGGCATAGAGCCTATTGCAAAGTAGCAGTCTTGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGAGCACAGGTGGTGCTaGAGCCTTCCCCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSEHRWC*SLPLDL
Trigger: GAGATCAAGGGGAAGGCTGCAGCACCACCTGTGCTC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTTTGAGCACAGGTGGTaGTGCAGCCTTCCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCFEHRW*CSLPLD
Trigger: ATCAAGGGGAAGGCTGCAGCACCACCTGTGCTCAAA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTTCTCCTCCAGCTCCTTaGGAAGGCTCTCGGGTAACT +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSSPPAP*EGSRVT
Trigger: AGTTACCCGAGAGCCTTCCCAAGGAGCTGGAGGAGA...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGGAAAGCGGGGCGAGTaGTCATTCACGTCGTTGACG +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAGKRGE*SFTSLT
Trigger: CGTCAACGACGTGAATGACCACTCGCCCCGCTTTCC...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGGAAAGCGGGGCGAGTaGTCATTCACGTCGTTGACG +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHGKRGE*SFTSLT
Trigger: CGTCAACGACGTGAATGACCACTCGCCCCGCTTTCC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTGAGCACGTGAATTGCTaGCCGGTTGTCATTCACGTC +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQREHVNC*PVVIHV
Trigger: GACGTGAATGACAACCGGCCAGCAATTCACGTGCTC...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGAGCACGTGAATTGCTaGCCGGTTGTCATTCACGTC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCEHVNC*PVVIHV
Trigger: GACGTGAATGACAACCGGCCAGCAATTCACGTGCTC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGAGCACGTGAATTGCTaGCCGGTTGTCATTCACGTC +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHEHVNC*PVVIHV
Trigger: GACGTGAATGACAACCGGCCAGCAATTCACGTGCTC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCCACACTCTGCGGTGTaGACCATCTTTGATTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCPHSAV*TIFDCR
Trigger: CCTGCAATCAAAGATGGTCCACACCGCAGAGTGTGG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACGCTTTCGGAATCAATaGCAAAAGATGGTCCACACT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKRFRNQ*QKMVHT
Trigger: AGTGTGGACCATCTTTTGCCATTGATTCCGAAAGCG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTCGCTTTCGGAATCAATaGCAAAAGATGGTCCACACT +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLRFRNQ*QKMVHT
Trigger: AGTGTGGACCATCTTTTGCCATTGATTCCGAAAGCG...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTCATGCTCTGCAATGGTaGCATTGTACACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRHALQW*HCTPAS
Trigger: GGAGGCAGGTGTACAATGCCACCATTGCAGAGCATG...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATCATGCTCTGCAATGGTaGCATTGTACACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHHALQW*HCTPAS
Trigger: GGAGGCAGGTGTACAATGCCACCATTGCAGAGCATG...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGATGATCTCGGTGCCTaGCTGGGTCTCATCACTGAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCDDLGA*LGLITD
Trigger: ATCAGTGATGAGACCCAGCCAGGCACCGAGATCATC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAGATGATCTCGGTGCCTaGCTGGGTCTCATCACTGAT +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRDDLGA*LGLITD
Trigger: ATCAGTGATGAGACCCAGCCAGGCACCGAGATCATC...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATATATCCCAGAGTCCTaGTCAGTGGCAAGAACATTG +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILYIPES*SVARTL
Trigger: CAATGTTCTTGCCACTGACCAGGACTCTGGGATATA...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATATATCCCAGAGTCCTaGTCAGTGGCAAGAACATTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKYIPES*SVARTL
Trigger: CAATGTTCTTGCCACTGACCAGGACTCTGGGATATA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTGGACGACACGTTTCCTaGAATAAGCTCATAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFGRHVS*NKLISH
Trigger: GTGGCTTATGAGCTTATTCCAGGAAACGTGTCGTCC...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCCAGCCGCGGGTGAATaGAGAACTTTCCGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHPAAGE*RTFRRD
Trigger: ATCTCGGCGGAAAGTTCTCCATTCACCCGCGGCTGG...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCCAGGGGGCGTGGTCTaGGATATTCTAATCTCATCC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCPGGVV*DILISS
Trigger: GGATGAGATTAGAATATCCCAGACCACGCCCCCTGG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTTGCCTATTACCCCTTaGGGAACAGGGCTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLPITP*GTGLSS
Trigger: CGAAGAGAGCCCTGTTCCCCAAGGGGTAATAGGCAA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATAGCACAGTCATCTCATaGTGCCCCCGGTGCTCACGA +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHSTVIS*CPRCSR
Trigger: TCGTGAGCACCGGGGGCACCATGAGATGACTGTGCT...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAAGACGTAAACCGCCATaGTGGCGTTTCGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEARRKPP*WRFVVG
Trigger: CCCCACCACGAAACGCCACCATGGCGGTTTACGTCT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGGGTGGATGAGAAATaGATTCGTGCCAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGVDEK*IRARVV
Trigger: CACAACCCTGGCACGAATCCATTTCTCATCCACCCC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCAAAGGACAGGTTGTaGTTAGTAAGCCTGATGACT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPKDRL*LVSLMT
Trigger: AGTCATCAGGCTTACTAACCACAACCTGTCCTTTGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTACAGAGCTCCTAGGTaGATCTCCCAGGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCYRAPR*ISQVRA
Trigger: TGCTCTGACCTGGGAGATCCACCTAGGAGCTCTGTA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCCCCAAATGTTTGGCTaGCTTCTGCTGTTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCPQMFG*LLLFRQ
Trigger: CTGCCGAAACAGCAGAAGCCAGCCAAACATTTGGGG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTGCCGGCATTCTTGGTaGGACTGCTTTAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCCRHSW*DCFNPR
Trigger: CCTGGGATTAAAGCAGTCCCACCAAGAATGCCGGCA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR CAA 72 bp AACCCCATTCCCACTTGTAGTACTTGTTTGGTGGCATaGTGGCACTGGATACAGACTGATAAACCCATCAAT +
Preference number: 4 (lower is better)
Translates to: NPIPTCSTCLVA*WHWIQTDKPIN
Trigger: ATTGATGGGTTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGGAATGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGTGAGAAAGAGCACGTaGATTGCTGGCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIVRKST*IAGRLS
Trigger: TGACAACCGGCCAGCAATTCACGTGCTCTTTCTCAC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGTGTGGACCATCTTTaGTTGCAGGGAGCCGAGATT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGVDHL*LQGAEI
Trigger: AATCTCGGCTCCCTGCAATCAAAGATGGTCCACACC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCATCACATCATCTACGGTaGTGCTCACCAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEASHHLR*CSPGRW
Trigger: CCACCTGCCTGGTGAGCATCACCGTAGATGATGTGA...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATTCACATCATCTACGGTaGTGCTCACCAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHSHHLR*CSPGRW
Trigger: CCACCTGCCTGGTGAGCATCACCGTAGATGATGTGA...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGCTGGGTCTCATCACTaGTGCTCGTCACATAGGTTG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIAGSHH*CSSHRL
Trigger: CAACCTATGTGACGAGCATCAGTGATGAGACCCAGC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAAGCCCACCACCGTCTTaGGCAGAGACCATCAACGAA +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEASPPPS*AETINE
Trigger: TTCGTTGATGGTCTCTGCTCAAGACGGTGGTGGGCT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAGCCCACCACCGTCTTaGGCAGAGACCATCAACGAA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSPPPS*AETINE
Trigger: TTCGTTGATGGTCTCTGCTCAAGACGGTGGTGGGCT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAAACAAGTCTCCGGTTaGGCTGTCTATTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKKQVSG*AVYFKV
Trigger: CACTTTGAAATAGACAGCTCAACCGGAGACTTGTTT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCAAGACGGGACACAGTaGCTAGTGTGCCAAATGAGG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIQDGTQ*LVCQMR
Trigger: CCTCATTTGGCACACTAGTCACTGTGTCCCGTCTTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCCTTCGTCTGGATCGTaGGCAGTTATGTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSPSSGS*AVMWWT
Trigger: GGTCCACCACATAACTGCTCACGATCCAGACGAAGG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTAGTACTCGAAGGGTaGAGACTTCTTGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLVLEG*RLLEFL
Trigger: GAGAAATTCAAGAAGTCTTCACCCTTCGAGTACTAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGCACTAAATGTATGCTaGGATCTGGCTTCACGGTCG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCALNVC*DLASRS
Trigger: CGACCGTGAAGCCAGATCTCAGCATACATTTAGTGC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGATAGCTCAGGCTGCTaGAGTTTGGGGGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCDSSGC*SLGDCH
Trigger: ATGACAATCCCCCAAACTTCAGCAGCCTGAGCTATC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGAGGGGTGCTTTCCTTaGCATGGGTGTGATAGCTCA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIEGCFP*HGCDSS
Trigger: TGAGCTATCACACCCATGTCAAGGAAAGCACCCCTC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGAGACCACAGTGATGTaGCTCCCTAGAGGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSETTVM*LPRGVL
Trigger: AAGCACCCCTCTAGGGAGTCACATCACTGTGGTCTC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGTCACGGTCATTTGCTaGGACCACAGTGATGTGACT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCVTVIC*DHSDVT
Trigger: AGTCACATCACTGTGGTCTCAGCAAATGACCGTGAC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTTGAGAACATAAACTaGGGTGCATGGTCGTTATCA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLENIN*GAWSLS
Trigger: TGATAACGACCATGCACCTCAGTTTATGTTCTCAAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTGTCAAAGGGTCAATaGGGAAGAGATCATGATCAT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLSKGQ*GRDHDH
Trigger: ATGATCATGATCTCTTCCTCATTGACCCTTTGACAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACAAGGGAGTAAAGAATaGCTCCATCAATACCAGCAT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKQGSKE*LHQYQH
Trigger: ATGCTGGTATTGATGGAGTCATTCTTTACTCCCTTG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGAGGTCGTCTGAGTTaGAAGAGCTGCACACCTTAC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRGRLS*KSCTPY
Trigger: GTAAGGTGTGCAGCTCTTTCAACTCAGACGACCTCT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCAGGAAGAGGACTTCTaGACCACCATCGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIQEEDF*TTIVRM
Trigger: CATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGCAGCCACCTCTTCTaGCCCTGGATTTCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGSHLF*PWISLN
Trigger: GTTTAAAGAAATCCAGGGGCAGAAGAGGTGGCTGCC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCCAAGGACAGAGAGATaGTCCCGTCTCCAAGACCCA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSPRTER*SRLQDP
Trigger: TGGGTCTTGGAGACGGGAGCATCTCTCTGTCCTTGG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCACCAAGGACAGAGAGATaGTCCCGTCTCCAAGACCCA +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAPRTER*SRLQDP
Trigger: TGGGTCTTGGAGACGGGAGCATCTCTCTGTCCTTGG...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTAACCGGGGCATGCTCTaGAATGGTGGCATTGTACAC +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSNRGML*NGGIVH
Trigger: GTGTACAATGCCACCATTGCAGAGCATGCCCCGGTT...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGTAGTGCTCACATTTTaGAAGAATCCGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCVVLTF*KNPSSG
Trigger: CCCCGAGGACGGATTCTTGCAAAATGTGAGCACTAC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGTAGTGCTCACATTTTaGAAGAATCCGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHVVLTF*KNPSSG
Trigger: CCCCGAGGACGGATTCTTGCAAAATGTGAGCACTAC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTGATGCCTGGTAAATaGTTTGTTCAAAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLMPGK*FVQSMV
Trigger: CACCATGCTTTGAACAAAGCATTTACCAGGCATCAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCACACGGACTACAAGTaGTCCCTCTGTGTAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIHTDYK*SLCVVH
Trigger: GTGCACTACACAGAGGGAGCACTTGTAGTCCGTGTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTTTGAGCACAGGTGGTaGTGCAGCCTTCCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIFEHRW*CSLPLD
Trigger: ATCAAGGGGAAGGCTGCAGCACCACCTGTGCTCAAA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCATTCTTGGTGGGACTaGTTTAATCCCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIHSWWD*FNPRLG
Trigger: GCCCAGCCTGGGATTAAAGCAGTCCCACCAAGAATG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAAAAATTGGGAGTCATaGCTTCTGGCAGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKKNWES*LLAENQ
Trigger: TTGGTTCTCTGCCAGAAGGCATGACTCCCAATTTTT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCTCCTCCAGCTCCTTaGGAAGGCTCTCGGGTAACT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSPPAP*EGSRVT
Trigger: AGTTACCCGAGAGCCTTCCCAAGGAGCTGGAGGAGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTTGGCTGAAGAGAGGTaGTTGGTCATTGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRLAEER*LVIEVS
Trigger: GCTGACCTCAATGACCAACCACCTCTCTTCAGCCAA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCCACACTCTGCGGTGTaGACCATCTTTGATTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSPHSAV*TIFDCR
Trigger: CCTGCAATCAAAGATGGTCCACACCGCAGAGTGTGG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCATGCTCTGCAATGGTaGCATTGTACACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIHALQW*HCTPAS
Trigger: GGAGGCAGGTGTACAATGCCACCATTGCAGAGCATG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAACACGAACAAAGGCTTaGGCACTTAGCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEATRTKA*ALSPPP
Trigger: TGGGGGTGGGCTAAGTGCCCAAGCCTTTGTTCGTGT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATATCTCGGTGCCTGGCTaGGTCTCATCACTGATGCTC +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHISVPG*VSSLML
Trigger: GAGCATCAGTGATGAGACCCAGCCAGGCACCGAGAT...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGATGATCTCGGTGCCTaGCTGGGTCTCATCACTGAT +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSDDLGA*LGLITD
Trigger: ATCAGTGATGAGACCCAGCCAGGCACCGAGATCATC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTTTCACTGTTCCAATaGGACTATCTTCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLSLFQ*DYLQAH
Trigger: ATGTGCCTGAAGATAGTCCCATTGGAACAGTGAAAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCCAGGGGGCGTGGTCTaGGATATTCTAATCTCATCC +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLPGGVV*DILISS
Trigger: GGATGAGATTAGAATATCCCAGACCACGCCCCCTGG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCCAGGGGGCGTGGTCTaGGATATTCTAATCTCATCC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIPGGVV*DILISS
Trigger: GGATGAGATTAGAATATCCCAGACCACGCCCCCTGG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTTTGCCTATTACCCCTTaGGGAACAGGGCTCTCTTCG +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSLPITP*GTGLSS
Trigger: CGAAGAGAGCCCTGTTCCCCAAGGGGTAATAGGCAA...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTACAGAGCTCCTAGGTaGATCTCCCAGGTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIYRAPR*ISQVRA
Trigger: TGCTCTGACCTGGGAGATCCACCTAGGAGCTCTGTA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGTGCTTCGTGAACCCTaGATGCTACAGTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSVLREP*MLQSLA
Trigger: GGCCAGAGACTGTAGCATCCAGGGTTCACGAAGCAC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTACAATGACAGTTGTCTaGTTTGTAGGCGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCTMTVV*FVGDSG
Trigger: CCCCGAGTCGCCTACAAACCAGACAACTGTCATTGT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCGTGGTTGTCCTGGCTaGAATGCCCTGGTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSRGCPG*NALVCN
Trigger: GTTACAGACCAGGGCATTCCAGCCAGGACAACCACG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCACGGGTCCAGTCATaGTCGATGTTTGAAAATGTA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSRVQS*SMFENV
Trigger: TACATTTTCAAACATCGACCATGACTGGACCCGTGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCTTTGTCTTTGGCTTaGACTGTGAGGCAGTATTTA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPLSLA*TVRQYL
Trigger: TAAATACTGCCTCACAGTCCAAGCCAAAGACAAAGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTATTTTGAGCACAGGTaGTGCTGCAGCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCYFEHR*CCSLPL
Trigger: AAGGGGAAGGCTGCAGCACCACCTGTGCTCAAAATA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTACTGCCGGCATTCTTaGTGGGACTGCTTTAATCCC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCYCRHS*WDCFNP
Trigger: GGGATTAAAGCAGTCCCACCAAGAATGCCGGCAGTA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGTGAGAAAGAGCACGTaGATTGCTGGCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAVRKST*IAGRLS
Trigger: TGACAACCGGCCAGCAATTCACGTGCTCTTTCTCAC...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGTGAGAAAGAGCACGTaGATTGCTGGCCGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHVRKST*IAGRLS
Trigger: TGACAACCGGCCAGCAATTCACGTGCTCTTTCTCAC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTGTAATGCTGTTGGCTaGAGAGAGGTGGTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCCNAVG*REVVGH
Trigger: ATGACCAACCACCTCTCTTCAGCCAACAGCATTACA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGGTGTGGACCATCTTTaGTTGCAGGGAGCCGAGATT +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHGVDHL*LQGAEI
Trigger: AATCTCGGCTCCCTGCAATCAAAGATGGTCCACACC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAAAGCCATAGAGTCCTaGATCTGCATCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCKAIES*ICIRGC
Trigger: ACAGCCTCTGATGCAGATTCAGGACTCTATGGCTTT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGCTCGTCACATAGGTTaGTGGGTTAAACACAGGATG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHARHIG*WVKHRM
Trigger: CATCCTGTGTTTAACCCATCAACCTATGTGACGAGC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGCTGGGTCTCATCACTaGTGCTCGTCACATAGGTTG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSAGSHH*CSSHRL
Trigger: CAACCTATGTGACGAGCATCAGTGATGAGACCCAGC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGCTGGGTCTCATCACTaGTGCTCGTCACATAGGTTG +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAAGSHH*CSSHRL
Trigger: CAACCTATGTGACGAGCATCAGTGATGAGACCCAGC...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGTGAGAGAGACTCACTaGCTTCCACTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHVRETH*LPLDRP
Trigger: TGGTCTATCAAGTGGAAGTCAGTGAGTCTCTCTCAC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTGTGAGAGAGACTCACTaGCTTCCACTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRVRETH*LPLDRP
Trigger: TGGTCTATCAAGTGGAAGTCAGTGAGTCTCTCTCAC...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATCATTTGTGTCATCGGTaGGAGAGACTCACTGACTTC +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHHLCHR*ERLTDF
Trigger: GAAGTCAGTGAGTCTCTCTCACCGATGACACAAATG...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAGCAGATCTAGAGAACTaGCCAGATTCAGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRADLEN*PDSGQD
Trigger: ATCCTGACCTGAATCTGGTCAGTTCTCTAGATCTGC...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCAAATGAGGGGTGGATaGGAAATGGATTCGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIQMRGG*EMDSCQ
Trigger: CTGGCACGAATCCATTTCTCATCCACCCCTCATTTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGTCACATTCACAGCCTaGTCAGATGCTGTTACTGTC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCVTFTA*SDAVTV
Trigger: GACAGTAACAGCATCTGATCAGGCTGTGAATGTGAC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGTCAAAGTCTGGGATaGAGAAAGTGCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHICQSLG*RKCWCA
Trigger: GGCACACCAGCACTTTCTTCATCCCAGACTTTGACA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAGGGTGAAGACTTCTTaGATTTCTCTGTCAAGTATG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKRVKTS*ISLSSM
Trigger: CATACTTGACAGAGAAATTCAAGAAGTCTTCACCCT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATATACAGGTGGTGGCTaGAGGAAATCTTTACATCTT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKYTGGG*RKSLHL
Trigger: AAGATGTAAAGATTTCCTTCAGCCACCACCTGTATA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATATTTCATGCTGTCCTaGATTGAGTCAGGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKYFMLS*IESGAK
Trigger: TTTTGCTCCTGACTCAATTCAGGACAGCATGAAATA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAGCTGTAGGAGCTGGTaGGCTCGTAATCTAGAATCG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISCRSW*ARNLES
Trigger: CGATTCTAGATTACGAGCTCACCAGCTCCTACAGCT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCTGGTGGATTATCATTaGCATCCAGCACACGGACTA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLVDYH*HPAHGL
Trigger: TAGTCCGTGTGCTGGATGTCAATGATAATCCACCAG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGAGGGGTGCTTTCCTTaGCATGGGTGTGATAGCTCA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSEGCFP*HGCDSS
Trigger: TGAGCTATCACACCCATGTCAAGGAAAGCACCCCTC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTTTGCCTCTCTCTTCTaGACTGTCTGGGGTAACACA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCFASLF*TVWGNT
Trigger: TGTGTTACCCCAGACAGTTCAGAAGAGAGAGGCAAA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCTAGAGCATTGTATGTaGGCACCATCTAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLEHCM*APSSTA
Trigger: AGCAGTGCTAGATGGTGCTCACATACAATGCTCTAG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATGGAAGCCAATTCAATaGTTACTACTAGGACATGGA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKWKPIQ*LLLGHG
Trigger: TCCATGTCCTAGTAGTAATCATTGAATTGGCTTCCA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGCAGCCACCTCTTCTaGCCCTGGATTTCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGSHLF*PWISLN
Trigger: GTTTAAAGAAATCCAGGGGCAGAAGAGGTGGCTGCC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGGGCAGCCACCTCTTCTaGCCCTGGATTTCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLGSHLF*PWISLN
Trigger: GTTTAAAGAAATCCAGGGGCAGAAGAGGTGGCTGCC...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAACCGGGGCATGCTCTaGAATGGTGGCATTGTACAC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSNRGML*NGGIVH
Trigger: GTGTACAATGCCACCATTGCAGAGCATGCCCCGGTT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCAGAGGCTGTCACCTaGAGAAAGCAGTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSEAVT*RKQCPT
Trigger: GGTTGGACACTGCTTTCTGCAGGTGACAGCCTCTGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCATCAGAGGCTGTCACCTaGAGAAAGCAGTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEASEAVT*RKQCPT
Trigger: GGTTGGACACTGCTTTCTGCAGGTGACAGCCTCTGA...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAAGGGTCGATCCGGAATaGCTGAGGTGCTTCATAGCT +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEARVDPE*LRCFIA
Trigger: AGCTATGAAGCACCTCAGGCATTCCGGATCGACCCT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGGTAGTGCTCACATTTTaGAAGAATCCGTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLVVLTF*KNPSSG
Trigger: CCCCGAGGACGGATTCTTGCAAAATGTGAGCACTAC...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCACGGTCGAGGGTGTTaGTGGTTTTCAATGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSHGRGC*WFSMCL
Trigger: CAGGCACATTGAAAACCAGCAACACCCTCGACCGTG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACACAATAGAAGTACCTaGCTCACAATTTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKHNRST*LTIFSH
Trigger: GTGACTGAAAATTGTGAGGCAGGTACTTCTATTGTG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGTTTGGCTGGCTTCTaGTGTTTCGGCAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHICLAGF*CFGSHH
Trigger: ATGGTGACTGCCGAAACAGCAGAAGCCAGCCAAACA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGGAATGCCAGGCATATaGAAATGTTCATCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKGMPGI*KCSSFS
Trigger: ACTAAAGGATGAACATTTGCATATGCCTGGCATTCC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTCACCTCTTCTGCCCCTaGATTTCTTTAAACGAATCT +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFHLFCP*ISLNES
Trigger: AGATTCGTTTAAAGAAATCCAGGGGCAGAAGAGGTG...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTTTGGCTGAAGAGAGGTaGTTGGTCATTGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSLAEER*LVIEVS
Trigger: GCTGACCTCAATGACCAACCACCTCTCTTCAGCCAA...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCCACACTCTGCGGTGTaGACCATCTTTGATTGCAGG +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHPHSAV*TIFDCR
Trigger: CCTGCAATCAAAGATGGTCCACACCGCAGAGTGTGG...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCCTGCCTCCAGAAGATaGGCTCATTGTCATTCACAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCPASRR*AHCHSH
Trigger: ATGTGAATGACAATGAGCCCATCTTCTGGAGGCAGG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAGAGATCATAGGTAGCTaGATCCCTTTCCCTGTCGAT +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTREIIGS*IPFPVD
Trigger: ATCGACAGGGAAAGGGATCCAGCTACCTATGATCTC...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTGAGGAACGCTGGGTaGTTGTCATTGACATCCATG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILRNAG*LSLTSM
Trigger: CATGGATGTCAATGACAACCACCCAGCGTTCCTCAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATTTTCCAGGGAGACACTaGGGGAAGAAGGGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHFPGRH*GKKGLL
Trigger: TAACAGGCCCTTCTTCCCCCAGTGTCTCCCTGGAAA...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGATTGTTGTGGTGCTaGACAATGAAGGGAATCCCC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGLLWC*TMKGIP
Trigger: GGGGATTCCCTTCATTGTCCAGCACCACAACAATCC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAACTGGTAATAAAGTGTaGGAAAAGAAGGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKTGNKV*EKKDCG
Trigger: ACCACAGTCCTTCTTTTCCCACACTTTATTACCAGT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGTCGAGGGTGTTGCTaGTTTTCAATGTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGRGCC*FSMCLT
Trigger: TGTCAGGCACATTGAAAACCAGCAACACCCTCGACC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAAACCACAGTTCCATTaGGCCCCAAGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIKPQFH*APSPGH
Trigger: ATGACCTGGACTTGGGGCCCAATGGAACTGTGGTTT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCTTTATACAGGTGGTaGCTGAAGGAAATCTTTACA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPLYRW*LKEIFT
Trigger: TGTAAAGATTTCCTTCAGCCACCACCTGTATAAAGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATGGAATGCTTCTTCTTaGTTGCCAGACAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKWNASS*LPDRIE
Trigger: TTCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAGCTGTGGAACTCAATaGAGGGCAGCCACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSCGTQ*RAATVR
Trigger: TCTGACAGTGGCTGCCCTCCATTGAGTTCCACAGCT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGGAGTCATGCCTTCTaGCAGAGAACCAAGATGGTA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGSHAF*QRTKMV
Trigger: TACCATCTTGGTTCTCTGCCAGAAGGCATGACTCCC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTGCGAGTATCAATCCTaGCCCTCTATCAGGAACATG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCCEYQS*PSIRNM
Trigger: CATGTTCCTGATAGAGGGCCAGGATTGATACTCGCA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR CAA 72 bp CACATTTTTAACCCCATTCCCACTTGTAGTACTTGTTaGGTGGCATTGTGGCACTGGATACAGACTGATAAA +
Preference number: 4 (lower is better)
Translates to: HIFNPIPTCSTC*VALWHWIQTDK
Trigger: TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGGAATGGGGTTAAAAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTGTAATGCTGTTGGCTaGAGAGAGGTGGTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLCNAVG*REVVGH
Trigger: ATGACCAACCACCTCTCTTCAGCCAACAGCATTACA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTAAAGCCATAGAGTCCTaGATCTGCATCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSKAIES*ICIRGC
Trigger: ACAGCCTCTGATGCAGATTCAGGACTCTATGGCTTT...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGATCCCTGTCGATATCTTaGGAAACACAGATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRSLSIS*ETQICP
Trigger: TGGGCAAATCTGTGTTTCTCAAGATATCGACAGGGA...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGTGAGAGAGACTCACTaGCTTCCACTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIVRETH*LPLDRP
Trigger: TGGTCTATCAAGTGGAAGTCAGTGAGTCTCTCTCAC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCATTTGTGTCATCGGTaGGAGAGACTCACTGACTTC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIHLCHR*ERLTDF
Trigger: GAAGTCAGTGAGTCTCTCTCACCGATGACACAAATG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCATTTGTGTCATCGGTaGGAGAGACTCACTGACTTC +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLHLCHR*ERLTDF
Trigger: GAAGTCAGTGAGTCTCTCTCACCGATGACACAAATG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATATTGATGTCAGTAACTaGGACGTAAACCGCCATGGT +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHIDVSN*DVNRHG
Trigger: ACCATGGCGGTTTACGTCTCAGTTACTGACATCAAT...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAAATGTCTAATATTCTaGGACATGATTGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKKCLIF*DMIALP
Trigger: AGGGAGAGCAATCATGTCTCAGAATATTAGACATTT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCATCATCTTTGGCATTaGAGACATACACCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCHHLWH*RHTPGF
Trigger: GAACCCTGGTGTATGTCTTCAATGCCAAAGATGATG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGATGATTTCTGCATGTaGCCCTGTGTCACGGTCATT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIDDFCM*PCVTVI
Trigger: AATGACCGTGACACAGGGTCACATGCAGAAATCATC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGGATTTGCTTAGCATaGATATCCCCTGTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRICLA*ISPVKG
Trigger: CCCTTTGACAGGGGATATTCATGCTAAGCAAATCCT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCTTTGGCTTGGACTGTaGGGCAGTATTTATTGCCAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLWLGL*GSIYCH
Trigger: ATGGCAATAAATACTGCCTCACAGTCCAAGCCAAAG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGTAACACATTATTTTaGGCACAGGTGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGNTLF*AQVVLQ
Trigger: CTGCAGCACCACCTGTGCTCAAAATAATGTGTTACC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATACTTCCTGATCACCTaGAATAAAGACAGACTCTTT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKYFLIT*NKDRLF
Trigger: AAAGAGTCTGTCTTTATTTCAGGTGATCAGGAAGTA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACATTTCCTGAGAGGATaGTGTATGTTACTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKHFLRG*CMLLFH
Trigger: ATGGAAAAGTAACATACAGCATCCTCTCAGGAAATG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTGTGCCATCATCCAGTaGCAGAACAGTCAGAATATG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCCAIIQ*QNSQNM
Trigger: CATATTCTGACTGTTCTGGCACTGGATGATGGCACA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGAGGATTGTTGTGGTaGTGGACAATGAAGGGAATC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRGLLW*WTMKGI
Trigger: GATTCCCTTCATTGTCCAGCACCACAACAATCCTCT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCAACAGCTCTGTTATTaGCAGCATCCATATCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCQQLCY*QHPYQR
Trigger: CCTCTGATATGGATGCTGGCAATAACAGAGCTGTTG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGGATCAATGGTGAATaGACCAGAAGCCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRINGE*TRSLIS
Trigger: ACTGATGAGGCTTCTGGTGCATTCACCATTGATCCT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCTGTAACTTTTAACTaGAGCCAGATAGGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSVTFN*SQIGKY
Trigger: ATACTTCCCTATCTGGCTGCAGTTAAAAGTTACAGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAAGAAATGTTCTCATTaGTTTCTAAGTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKKKCSH*FLSLWL
Trigger: CAGCCACAGACTTAGAAAGCAATGAGAACATTTCTT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTGAGGCTTCCACTCTaGCAATCAACTGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILRLPL*QSTVCL
Trigger: AAGACAGACAGTTGATTGGCAGAGTGGAAGCCTCAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATAGAAAAGACTTTGTTTaGCAAACAAACCGACGGCCC +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHRKDFV*QTNRRP
Trigger: GGGCCGTCGGTTTGTTTGCCAAACAAAGTCTTTTCT...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGTAACTGCCAGCTTGTaGCAGGATCGCAGAAAAATC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIVTASL*QDRRKI
Trigger: GATTTTTCTGCGATCCTGCCACAAGCTGGCAGTTAC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTATCAATGGCAAAAGATaGTCCACACTCTGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIINGKR*STLCGV
Trigger: CACACCGCAGAGTGTGGACCATCTTTTGCCATTGAT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGGTGCCAGAGTTGTCTaGAAAATGTGTATGGTGACA +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHGARVV*KMCMVT
Trigger: TGTCACCATACACATTTTCCAGACAACTCTGGCACC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATTTCGAAAGTCCAGGATaGGCTGTGTTCGCGTTTCTC +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHFESPG*AVFAFL
Trigger: GAGAAACGCGAACACAGCCCATCCTGGACTTTCGAA...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCATTCGAAAGTCCAGGATaGGCTGTGTTCGCGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAFESPG*AVFAFL
Trigger: GAGAAACGCGAACACAGCCCATCCTGGACTTTCGAA...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAACCAACATATTTACTaGTTGACCTTCCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKNQHIY*LTFQNL
Trigger: AAGGTTCTGGAAGGTCAACCAGTAAATATGTTGGTT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAACCAACATATTTACTaGTTGACCTTCCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLNQHIY*LTFQNL
Trigger: AAGGTTCTGGAAGGTCAACCAGTAAATATGTTGGTT...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTAATGTTTTCCTTAAATTaGGAGGCAGATCTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LSRVHHLASTMISSWPILMFSLN*EADLEN
Trigger: GTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACAT...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTTATTTCTTTAATCTATaGATTCCTGCCACCCATCTC +
Preference number: 4 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLYFFNL*IPATHL
Trigger: GAGATGGGTGGCAGGAATCCATAGATTAAAGAAATA...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTACACCAGGGTTCCTATaGGAACATTCTCCTCTACAC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHITPGFL*EHSPLH
Trigger: GTGTAGAGGAGAATGTTCCCATAGGAACCCTGGTGT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTATTCCTTCCTTCGTCTaGATCGTGAGCAGTTATGTG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCIPSFV*IVSSYV
Trigger: CACATAACTGCTCACGATCCAGACGAAGGAAGGAAT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTCTGTCAAGTATGGTaGTTGTCACTACCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILCQVW*LSLPLQ
Trigger: CTGGAGAGGTAGTGACAACCACCATACTTGACAGAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGATTGTTGTGGTGCTaGACAATGAAGGGAATCCCC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGLLWC*TMKGIP
Trigger: GGGGATTCCCTTCATTGTCCAGCACCACAACAATCC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGTCCAAAGCACGAGTaGTTGAGAGTTCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGPKHE*LRVLLT
Trigger: TGTCAGGAGAACTCTCAACCACTCGTGCTTTGGACC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTATGTATGCTGAGATCTaGCTTCACGGTCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSMYAEI*LHGRGC
Trigger: ACACCCTCGACCGTGAAGCCAGATCTCAGCATACAT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAAACCACAGTTCCATTaGGCCCCAAGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSKPQFH*APSPGH
Trigger: ATGACCTGGACTTGGGGCCCAATGGAACTGTGGTTT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGCTTTCTAAGTCTGTaGCTGACAGAGTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHICFLSL*LTESAL
Trigger: CAGTGCTGACTCTGTCAGCCACAGACTTAGAAAGCA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGCGAGTATCAATCCTaGCCCTCTATCAGGAACATG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHICEYQS*PSIRNM
Trigger: CATGTTCCTGATAGAGGGCCAGGATTGATACTCGCA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGTGGCATTGTGGCACTaGATACAGACTGATAAACCC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIVALWH*IQTDKP
Trigger: GGGTTTATCAGTCTGTATCCAGTGCCACAATGCCAC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAAGCCTCTTCAGTGTCTaGGCCAGAGAAGAAAAGACT +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEASLFSV*AREEKT
Trigger: AGTCTTTTCTTCTCTGGCTCAGACACTGAAGAGGCT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTGTAATGCTGTTGGCTaGAGAGAGGTGGTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSCNAVG*REVVGH
Trigger: ATGACCAACCACCTCTCTTCAGCCAACAGCATTACA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTCCCTGTCGATATCTTaGGAAACACAGATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISLSIS*ETQICP
Trigger: TGGGCAAATCTGTGTTTCTCAAGATATCGACAGGGA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGTGAGAGAGACTCACTaGCTTCCACTTGATAGACCA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSVRETH*LPLDRP
Trigger: TGGTCTATCAAGTGGAAGTCAGTGAGTCTCTCTCAC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAAACATATTTACTGGTTaGCCTTCCAGAACCTTCACG +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRNIFTG*PSRTFT
Trigger: CGTGAAGGTTCTGGAAGGTCAACCAGTAAATATGTT...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTATGAAGCACCTGGCATaGTTTCAAACTGAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIMKHLA*FQTEAW
Trigger: CCAAGCTTCAGTTTGAAATCATGCCAGGTGCTTCAT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTATCCTTGTCCACAGCTaGAAGCACAAGAACCACTGT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSILVHS*KHKNHC
Trigger: ACAGTGGTTCTTGTGCTTTCAGCTGTGGACAAGGAT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCTGGTGGATTATCATTaGCATCCAGCACACGGACTA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLVDYH*HPAHGL
Trigger: TAGTCCGTGTGCTGGATGTCAATGATAATCCACCAG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCTTGAGAACATAAACTaGGGTGCATGGTCGTTATCA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLENIN*GAWSLS
Trigger: TGATAACGACCATGCACCTCAGTTTATGTTCTCAAG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTGCAAACTTGGAATCTaGTTTGGGACTATGAGCGAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCCKLGI*FGTMSD
Trigger: ATCGCTCATAGTCCCAAATCAGATTCCAAGTTTGCA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGTAACACATTATTTTaGGCACAGGTGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGNTLF*AQVVLQ
Trigger: CTGCAGCACCACCTGTGCTCAAAATAATGTGTTACC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTTGTTCATTCATTCATaGCCAATGGTGAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLFIHS*PMVSRY
Trigger: GTACCTGCTCACCATTGGTCATGAATGAATGAACAA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATAAAGAGCACGTGAATTaGTGGCCGGTTGTCATTCAC +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHKEHVN*WPVVIH
Trigger: GTGAATGACAACCGGCCAGCAATTCACGTGCTCTTT...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTTCAAACTCAGCAGGTaGCAGAGTTGTCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRFKLSR*QSCLEN
Trigger: ATTTTCCAGACAACTCTGGCACCTGCTGAGTTTGAA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCTGAATATTAACAACTaGCTGTCCTTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLNINN*LSLKRR
Trigger: CCTCCTCTTCAAGGACAGGCAGTTGTTAATATTCAG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGTGCCATCATCCAGTaGCAGAACAGTCAGAATATG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHICAIIQ*QNSQNM
Trigger: CATATTCTGACTGTTCTGGCACTGGATGATGGCACA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCAACAGCTCTGTTATTaGCAGCATCCATATCAGAGG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIQQLCY*QHPYQR
Trigger: CCTCTGATATGGATGCTGGCAATAACAGAGCTGTTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAGGATCAATGGTGAATaGACCAGAAGCCTCATCAGT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIRINGE*TRSLIS
Trigger: ACTGATGAGGCTTCTGGTGCATTCACCATTGATCCT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTATCACACCACTCAGTaGATCAATCTGGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCYHTTQ*INLECF
Trigger: GAAGCATTCCAGATTGATGCACTGAGTGGTGTGATA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGCCCAATCTCGAGTTaGTGGCTTGAAAACATTTTG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSPISS*WLENIL
Trigger: CAAAATGTTTTCAAGCCAGCAACTCGAGATTGGGCT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATCACCTCTTCTGCCCCTaGATTTCTTTAAACGAATCT +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHHLFCP*ISLNES
Trigger: AGATTCGTTTAAAGAAATCCAGGGGCAGAAGAGGTG...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAGAAAAGACTTTGTTTaGCAAACAAACCGACGGCCC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIRKDFV*QTNRRP
Trigger: GGGCCGTCGGTTTGTTTGCCAAACAAAGTCTTTTCT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGTAACTGCCAGCTTGTaGCAGGATCGCAGAAAAATC +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHVTASL*QDRRKI
Trigger: GATTTTTCTGCGATCCTGCCACAAGCTGGCAGTTAC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATATCAATGGCAAAAGATaGTCCACACTCTGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHINGKR*STLCGV
Trigger: CACACCGCAGAGTGTGGACCATCTTTTGCCATTGAT...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAATCAATGGCAAAAGATaGTCCACACTCTGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAINGKR*STLCGV
Trigger: CACACCGCAGAGTGTGGACCATCTTTTGCCATTGAT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCGCTTTCGGAATCAATaGCAAAAGATGGTCCACACT +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLRFRNQ*QKMVHT
Trigger: AGTGTGGACCATCTTTTGCCATTGATTCCGAAAGCG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTATATCCCAGAGTCCTaGTCAGTGGCAAGAACATTG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIYIPES*SVARTL
Trigger: CAATGTTCTTGCCACTGACCAGGACTCTGGGATATA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTTATATCCCAGAGTCCTaGTCAGTGGCAAGAACATTG +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSYIPES*SVARTL
Trigger: CAATGTTCTTGCCACTGACCAGGACTCTGGGATATA...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGGTGCCAGAGTTGTCTaGAAAATGTGTATGGTGACA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIGARVV*KMCMVT
Trigger: TGTCACCATACACATTTTCCAGACAACTCTGGCACC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCATCATGCAAGAAGGTaGGGGAATTGTCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCHHARR*GNCHSH
Trigger: ATGAGAATGACAATTCCCCCACCTTCTTGCATGATG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGACATCATGCAAGAAGGTaGGGGAATTGTCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRHHARR*GNCHSH
Trigger: ATGAGAATGACAATTCCCCCACCTTCTTGCATGATG...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTAACCAACATATTTACTaGTTGACCTTCCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFNQHIY*LTFQNL
Trigger: AAGGTTCTGGAAGGTCAACCAGTAAATATGTTGGTT...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTTATTTCTTTAATCTATaGATTCCTGCCACCCATCTC +
Preference number: 4 (lower is better)
Translates to: SRVHHLASTMISSWPILFYFFNL*IPATHL
Trigger: GAGATGGGTGGCAGGAATCCATAGATTAAAGAAATA...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTCATCCTGGAAAGATaGGGAATGGTCATTCTGATC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILILER*GMVILI
Trigger: GATCAGAATGACCATTCCCCATCTTTCCAGGATGAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGTGCCAAATGAGGGGTaGATGAGAAATGGATTCGTG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSVPNEG*MRNGFV
Trigger: CACGAATCCATTTCTCATCCACCCCTCATTTGGCAC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTTTCTCTGTCAAGTATaGTGGTTGTCACTACCTCTC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCFLCQV*WLSLPL
Trigger: GAGAGGTAGTGACAACCACCATACTTGACAGAGAAA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGCCCTTTATACAGGTaGTGGCTGAAGGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSPLYR*WLKEIF
Trigger: AAAGATTTCCTTCAGCCACCACCTGTATAAAGGGCT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGATTTCCACCATCACTaGCTTCCACAAGAAATTGAG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCDFHHH*LPQEIE
Trigger: CTCAATTTCTTGTGGAAGCCAGTGATGGTGGAAATC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAGAATGACAAGCTCATaGCTAGCACTTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIRMTSS*LALASL
Trigger: CAGAGAAGCAAGTGCTAGCCATGAGCTTGTCATTCT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAACTTGGAATCTGATTTaGGACTATGAGCGATTATTT +
Preference number: 4 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKTWNLI*DYERLF
Trigger: AAATAATCGCTCATAGTCCCAAATCAGATTCCAAGT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATTCCCTGTCGATATCTTaGGAAACACAGATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHSLSIS*ETQICP
Trigger: TGGGCAAATCTGTGTTTCTCAAGATATCGACAGGGA...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAATTGATGTCAGTAACTaGGACGTAAACCGCCATGGT +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAIDVSN*DVNRHG
Trigger: ACCATGGCGGTTTACGTCTCAGTTACTGACATCAAT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTATTGATGTCAGTAACTaGGACGTAAACCGCCATGGT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSIDVSN*DVNRHG
Trigger: ACCATGGCGGTTTACGTCTCAGTTACTGACATCAAT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAACATATTTACTGGTTaGCCTTCCAGAACCTTCACG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHINIFTG*PSRTFT
Trigger: CGTGAAGGTTCTGGAAGGTCAACCAGTAAATATGTT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGAACATATTTACTGGTTaGCCTTCCAGAACCTTCACG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLNIFTG*PSRTFT
Trigger: CGTGAAGGTTCTGGAAGGTCAACCAGTAAATATGTT...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGATAGTGGGATCACCTaGATATTAACAACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIDSGIT*ILTTAC
Trigger: ACAGGCAGTTGTTAATATTCAGGTGATCCCACTATC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGGGAATGGTCATTCTaGTCTTCCACATCGATACTA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGEWSF*SSTSIL
Trigger: TAGTATCGATGTGGAAGATCAGAATGACCATTCCCC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCATGCTGTCCTGAATTaGGTCAGGAGCAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSHAVLN*VRSKSF
Trigger: AAAGCTTTTGCTCCTGACTCAATTCAGGACAGCATG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTATCCACATCATGAACTaGCACATGAGTCACAATTAC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCIHIMN*HMSHNY
Trigger: GTAATTGTGACTCATGTGTCAGTTCATGATGTGGAT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAGGATTTGCTTAGCATaGATATCCCCTGTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSRICLA*ISPVKG
Trigger: CCCTTTGACAGGGGATATTCATGCTAAGCAAATCCT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCTTTGGCTTGGACTGTaGGGCAGTATTTATTGCCAT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLWLGL*GSIYCH
Trigger: ATGGCAATAAATACTGCCTCACAGTCCAAGCCAAAG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCAAGGGAGTAAAGAATaGCTCCATCAATACCAGCAT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIQGSKE*LHQYQH
Trigger: ATGCTGGTATTGATGGAGTCATTCTTTACTCCCTTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGTAAAATTGCTGATTTaGTCCCGGTCCAAAGCACGA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSVKLLI*SRSKAR
Trigger: TCGTGCTTTGGACCGGGAGCAAATCAGCAATTTTAC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTATCACACCACTCAGTaGATCAATCTGGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIYHTTQ*INLECF
Trigger: GAAGCATTCCAGATTGATGCACTGAGTGGTGTGATA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGAACATAAACTGAGGTaGATGGTCGTTATCATCCAG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIEHKLR*MVVIIQ
Trigger: CTGGATGATAACGACCATGCACCTCAGTTTATGTTC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGTGCCAGAGTTGTCTaGAAAATGTGTATGGTGACA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGARVV*KMCMVT
Trigger: TGTCACCATACACATTTTCCAGACAACTCTGGCACC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGGTGCCAGAGTTGTCTaGAAAATGTGTATGGTGACA +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAGARVV*KMCMVT
Trigger: TGTCACCATACACATTTTCCAGACAACTCTGGCACC...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCTTTCACTGTTCCAATaGGACTATCTTCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSLSLFQ*DYLQAH
Trigger: ATGTGCCTGAAGATAGTCCCATTGGAACAGTGAAAG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCTCATCCTGGAAAGATaGGGAATGGTCATTCTGATC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLILER*GMVILI
Trigger: GATCAGAATGACCATTCCCCATCTTTCCAGGATGAG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTACAATGAGCTCATCCTaGAAAGATGGGGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSTMSSS*KDGEWS
Trigger: TGACCATTCCCCATCTTTCCAGGATGAGCTCATTGT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTATTCCTTCCTTCGTCTaGATCGTGAGCAGTTATGTG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSIPSFV*IVSSYV
Trigger: CACATAACTGCTCACGATCCAGACGAAGGAAGGAAT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGAAACAATAAACTCTaGTGCGTGATCGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGNNKL*CVIVFI
Trigger: GATGAAAACGATCACGCACCAGAGTTTATTGTTTCC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTACTGGTAATAAAGTGTaGGAAAAGAAGGACTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCTGNKV*EKKDCG
Trigger: ACCACAGTCCTTCTTTTCCCACACTTTATTACCAGT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGCATCCCTTTATCTGTaGCTTGGACAATCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSASLYL*LGQSSC
Trigger: ACAGCTTGATTGTCCAAGCCACAGATAAAGGGATGC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGAGATGGAGAAAAATTaGGAGTCATGCCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSEMEKN*ESCLLA
Trigger: TGCCAGAAGGCATGACTCCCAATTTTTCTCCATCTC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGTTCACTGTGTCCTTTaGAAGTCTAATCATACAGAC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCVHCVL*KSNHTD
Trigger: GTCTGTATGATTAGACTTCCAAAGGACACAGTGAAC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGTAGTACTTGTTTGGTaGCATTGTGGCACTGGATAC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSVVLVW*HCGTGY
Trigger: GTATCCAGTGCCACAATGCCACCAAACAAGTACTAC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGTGGTAGATTCCAAATaGCTAAGAGGTAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: SWPILFHLFPMYILRFSHVVDSK*LRGNVK
Trigger: CTTAACATTACCTCTTAGTCATTTGGAATCTACCAC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGTGGTAGATTCCAAATaGCTAAGAGGTAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCVVDSK*LRGNVK
Trigger: CTTAACATTACCTCTTAGTCATTTGGAATCTACCAC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAACATATTTACTGGTTaGCCTTCCAGAACCTTCACG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSNIFTG*PSRTFT
Trigger: CGTGAAGGTTCTGGAAGGTCAACCAGTAAATATGTT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCATGTTTTCATTTCCTaGGAGGATGCTGTATGTTAC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIHVFIS*EDAVCY
Trigger: GTAACATACAGCATCCTCTCAGGAAATGAAAACATG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTATAAACTCTGGTGCGTaGTCGTTTTCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIINSGA*SFSSST
Trigger: TGTTGAAGATGAAAACGATCACGCACCAGAGTTTAT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGCTAAAACGATGAGTTaGACCTCATTTCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIAKTMS*TSFLTS
Trigger: TGAAGTCAGAAATGAGGTTCAACTCATCGTTTTAGC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTTGGGGGATTGTCATTaGCATCAAGTACTTGTATTG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILGDCH*HQVLVL
Trigger: CAATACAAGTACTTGATGTCAATGACAATCCCCCAA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTATCATCCAGGACACTaGCAAACACAACTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSYHPGH*QTQLQK
Trigger: CTTTTGCAGTTGTGTTTGTCAGTGTCCTGGATGATA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGTGAGAAAACAGGGTaGTACAATAGAATAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSEKTG*YNRIGQ
Trigger: TTGACCTATTCTATTGTATCACCCTGTTTTCTCACT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCTGTCAAAGGGTCAATaGGGAAGAGATCATGATCAT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLSKGQ*GRDHDH
Trigger: ATGATCATGATCTCTTCCTCATTGACCCTTTGACAG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTGCAAACTTGGAATCTaGTTTGGGACTATGAGCGAT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSCKLGI*FGTMSD
Trigger: ATCGCTCATAGTCCCAAATCAGATTCCAAGTTTGCA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGCACACCTTACTTCCTaGTCACCTGAAATAAAGACA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSAHLTS*SPEIKT
Trigger: TGTCTTTATTTCAGGTGATCAGGAAGTAAGGTGTGC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTACAGACAACAGGTCTaGCAGAATATACACTACTTA +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCYRQQV*QNIHYL
Trigger: TAAGTAGTGTATATTCTGTCAGACCTGTTGTCTGTA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAAAGCTGCAAGTGTGTaGGCAAATGGTAAAAAGACT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIKAASV*ANGKKT
Trigger: AGTCTTTTTACCATTTGCTCACACACTTGCAGCTTT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTACAAAATTTCACAGATaGGGCCTATGGAAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHITKFHR*GLWKKN
Trigger: GTTCTTCTTCCATAGGCCTCATCTGTGAAATTTTGT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCATTCAAACTCAGCAGGTaGCAGAGTTGTCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEAFKLSR*QSCLEN
Trigger: ATTTTCCAGACAACTCTGGCACCTGCTGAGTTTGAA...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTTCATCAGGATCCTTTaGAAACACAGTTGTAACCAA +
Preference number: 4 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRFIRIL*KHSCNQ
Trigger: TTGGTTACAACTGTGTTTGCAAAGGATCCTGATGAA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCATTTCCTGAGAGGATaGTGTATGTTACTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCHFLRG*CMLLFH
Trigger: ATGGAAAAGTAACATACAGCATCCTCTCAGGAAATG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGCTTCATACAGGTGCTaGTTAAATACTGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSASYRC*LNTGAS
Trigger: TGAAGCTCCAGTATTTAAGCAGCACCTGTATGAAGC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCACAATAGAAGTACCTaGCTCACAATTTTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIHNRST*LTIFSH
Trigger: GTGACTGAAAATTGTGAGGCAGGTACTTCTATTGTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTATCCTGTATCAAGACTaGTACTTTGCAATAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIILYQD*YFAIGS
Trigger: AGAGCCTATTGCAAAGTAGCAGTCTTGATACAGGAT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGAACATAAACTGAGGTaGATGGTCGTTATCATCCAG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSEHKLR*MVVIIQ
Trigger: CTGGATGATAACGACCATGCACCTCAGTTTATGTTC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCTTTCACTGTTCCAATaGGACTATCTTCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLSLFQ*DYLQAH
Trigger: ATGTGCCTGAAGATAGTCCCATTGGAACAGTGAAAG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCATCATGCAAGAAGGTaGGGGAATTGTCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHHHARR*GNCHSH
Trigger: ATGAGAATGACAATTCCCCCACCTTCTTGCATGATG...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCATCATGCAAGAAGGTaGGGGAATTGTCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSHHARR*GNCHSH
Trigger: ATGAGAATGACAATTCCCCCACCTTCTTGCATGATG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAACCAACATATTTACTaGTTGACCTTCCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCNQHIY*LTFQNL
Trigger: AAGGTTCTGGAAGGTCAACCAGTAAATATGTTGGTT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGAAAGGTTTTTGCTATaGTCTGTAGTAATCACTCTG +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCERFLL*SVVITL
Trigger: CAGAGTGATTACTACAGACCATAGCAAAAACCTTTC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGTAACTGTCAAAGTCTaGGATGAAGAAAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSVTVKV*DEESAG
Trigger: ACCAGCACTTTCTTCATCCCAGACTTTGACAGTTAC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGTGCTGCTTAAATACTaGAGCTTCATCATTTACATC +
Preference number: 4 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCVLLKY*SFIIYI
Trigger: GATGTAAATGATGAAGCTCCAGTATTTAAGCAGCAC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTTTCTCTGTCAAGTATaGTGGTTGTCACTACCTCTC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSFLCQV*WLSLPL
Trigger: GAGAGGTAGTGACAACCACCATACTTGACAGAGAAA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAGCCCTTTATACAGGTaGTGGCTGAAGGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSPLYR*WLKEIF
Trigger: AAAGATTTCCTTCAGCCACCACCTGTATAAAGGGCT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGGAATGCTTCTTCTTaGTTGCCAGACAGAATAGAA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIWNASS*LPDRIE
Trigger: TTCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCCTTTGTCTTTGGCTTaGACTGTGAGGCAGTATTTA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSPLSLA*TVRQYL
Trigger: TAAATACTGCCTCACAGTCCAAGCCAAAGACAAAGG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTCTGCTTTAAGTTCATaGCATGTACCACTGATGTGT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISALSS*HVPLMC
Trigger: ACACATCAGTGGTACATGCCATGAACTTAAAGCAGA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCCAATCTCGAGTTGCTaGCTTGAAAACATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIPISSC*LENILF
Trigger: GAACAAAATGTTTTCAAGCCAGCAACTCGAGATTGG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
3UTR CAA 72 bp GTGATCAGCAGCAATGTGACCAGAGTACACTATATTTaGTTTCCATATAAACATTCTGGCAGTCAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: VISSNVTRVHYI*FPYKHSGSQLS
Trigger: ACTTAACTGACTGCCAGAATGTTTATATGGAAACAAAATATAGTGTACTCTGGTCACATTGCTGCTGATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGTGGTAGATTCCAAATaGCTAAGAGGTAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIVVDSK*LRGNVK
Trigger: CTTAACATTACCTCTTAGTCATTTGGAATCTACCAC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGGTGGTAGATTCCAAATaGCTAAGAGGTAATGTTAAG +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLVVDSK*LRGNVK
Trigger: CTTAACATTACCTCTTAGTCATTTGGAATCTACCAC...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCATGTTTTCATTTCCTaGGAGGATGCTGTATGTTAC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSHVFIS*EDAVCY
Trigger: GTAACATACAGCATCCTCTCAGGAAATGAAAACATG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTATTTCATGCTGTCCTaGATTGAGTCAGGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSYFMLS*IESGAK
Trigger: TTTTGCTCCTGACTCAATTCAGGACAGCATGAAATA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTTGTTCAAAGCATGGTaGATTATCATTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILFKAW*IIILIL
Trigger: CAGGATGAGAATGATAATTCACCATGCTTTGAACAA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTATCCACATCATGAACTaGCACATGAGTCACAATTAC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSIHIMN*HMSHNY
Trigger: GTAATTGTGACTCATGTGTCAGTTCATGATGTGGAT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTTGATTCAGGAACTGTaGCCTGATAGAAATCTTGAG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLIQEL*PDRNLE
Trigger: CTCAAGATTTCTATCAGGTCACAGTTCCTGAATCAA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTATCAAGTACTTGTATTaGTATGACAGCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIIKYLY*YDSCGT
Trigger: AGTTCCACAGCTGTCATATCAATACAAGTACTTGAT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTTGGGGGATTGTCATTaGCATCAAGTACTTGTATTG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLGDCH*HQVLVL
Trigger: CAATACAAGTACTTGATGTCAATGACAATCCCCCAA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAGTGAGAAAACAGGGTaGTACAATAGAATAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISEKTG*YNRIGQ
Trigger: TTGACCTATTCTATTGTATCACCCTGTTTTCTCACT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTCTGATTTGGGACTATaGGCGATTATTTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISDLGL*AIIFIS
Trigger: GGAAATGAAAATAATCGCTCATAGTCCCAAATCAGA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTACTTCCTGATCACCTaGAATAAAGACAGACTCTTT +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIYFLIT*NKDRLF
Trigger: AAAGAGTCTGTCTTTATTTCAGGTGATCAGGAAGTA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTTCATCAGGATCCTTTaGAAACACAGTTGTAACCAA +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLFIRIL*KHSCNQ
Trigger: TTGGTTACAACTGTGTTTGCAAAGGATCCTGATGAA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCCTGGTAAAGTCAGGTaGATTATTTCTTTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIPGKVR*IISFAK
Trigger: TTTGGCAAAAGAAATAATGCACCTGACTTTACCAGG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAAGAAATGTTCTCATTaGTTTCTAAGTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIKKCSH*FLSLWL
Trigger: CAGCCACAGACTTAGAAAGCAATGAGAACATTTCTT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGATGTTTTCCTTAAATTaGGAGGCAGATCTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLMFSLN*EADLEN
Trigger: GTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACAT...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGAAACAATAAACTCTaGTGCGTGATCGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGNNKL*CVIVFI
Trigger: GATGAAAACGATCACGCACCAGAGTTTATTGTTTCC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCCTTTATACAGGTGGTaGCTGAAGGAAATCTTTACA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSPLYRW*LKEIFT
Trigger: TGTAAAGATTTCCTTCAGCCACCACCTGTATAAAGG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGCGTCAATCTTAAAGTaGTCAGAACTATCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSASILK*SELSSE
Trigger: TTCAGAAGATAGTTCTGATCACTTTAAGATTGACGC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTATCAAGTACTTGTATTaGTATGACAGCTGTGGAACT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSIKYLY*YDSCGT
Trigger: AGTTCCACAGCTGTCATATCAATACAAGTACTTGAT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR TCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCTGATTTGGGACTATaGGCGATTATTTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSDLGL*AIIFIS
Trigger: GGAAATGAAAATAATCGCTCATAGTCCCAAATCAGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTTCATCAGGATCCTTTaGAAACACAGTTGTAACCAA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSFIRIL*KHSCNQ
Trigger: TTGGTTACAACTGTGTTTGCAAAGGATCCTGATGAA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAACAATAAACTCTGGTaGGTGATCGTTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSNNKLW*VIVFIF
Trigger: GAAGATGAAAACGATCACGCACCAGAGTTTATTGTT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGAAAGGTTTTTGCTATaGTCTGTAGTAATCACTCTG +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSERFLL*SVVITL
Trigger: CAGAGTGATTACTACAGACCATAGCAAAAACCTTTC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTATCTTGAGAAAACACTaGTGGATTATCATTGACATC +
Preference number: 4 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIILRKH*WIIIDI
Trigger: GATGTCAATGATAATCCACCAGTGTTTTCTCAAGAT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAGATTTCTTCTCTTTTaGAATGCCAGGCATATGCAA +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSRFLLF*NARHMQ
Trigger: TTGCATATGCCTGGCATTCCAAAAGAGAAGAAATCT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR GCA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTTGAACTTCATCTTCTaGTTTAAGTTCATGGCATGT +
Preference number: 4 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLNFIF*FKFMAC
Trigger: ACATGCCATGAACTTAAAGCAGAAGATGAAGTTCAA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CCA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAACAATGATCAGCTCATaGCCAATCTTATTTCATCTA +
Preference number: 4 (lower is better)
Translates to: TCSIICSSILMFSLNWEATMISS*PILFHL
Trigger: TAGATGAAATAAGATTGGCCATGAGCTGATCATTGT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS GCA 90 bp CTCCACGCTCAGGAGGCCGGTGCGCCGGGGTCGGCCGCCGTCCCATaGCTCGATCTGCAGCCGGTGCGCCGCCGCCTCCTCTCGGTCCAA +
Preference number: 5 (lower is better)
Translates to: LHAQEAGAPGSAAVP*LDLQPVRRRLLSVQ
Trigger: TTGGACCGAGAGGAGGCGGCGGCGCACCGGCTGCAGATCGAGGCATGGGACGGCGGCCGACCCCGGCGCACCGGCCTCCTGAGCGTGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp AGGTCGCGGTCGGTGGCGCGCACGCGACAGACCTCGGCGCCCGGCTaGGCGTCCTCGCGCACCGCGGCGCGGTACTCGTCCTGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: RSRSVARTRQTSAPG*ASSRTAARYSSCSK
Trigger: CTTTGAGCAGGACGAGTACCGCGCCGCGGTGCGCGAGGACGCCCAGCCGGGCGCCGAGGTCTGTCGCGTGCGCGCCACCGACCGCGACCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 90 bp TGTAGTGGTCCCGCCGCTCGCGGTCCAGGCGCCGCGCAGTGCGGATaGTGCCGGTGTCCGGGTGCACGTGGAAGTCGTCCAGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: CSGPAARGPGAAQCG*CRCPGARGSRPAAG
Trigger: CCCCGCTGCTGGACGACTTCCACGTGCACCCGGACACCGGCATCATCCGCACTGCGCGGCGCCTGGACCGCGAGCGGCGGGACCACTACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp TGTCGTTCTCATCCAGCACGCGCAGCTCCACGCTCAGGAGGCCGGTaGGCCGGGGTCGGCCGCCGTCCCATGCCTCGATCTGCAGCCGGT +
Preference number: 5 (lower is better)
Translates to: CRSHPARAAPRSGGR*AGVGRRPMPRSAAG
Trigger: ACCGGCTGCAGATCGAGGCATGGGACGGCGGCCGACCCCGGCGCACCGGCCTCCTGAGCGTGGAGCTGCGCGTGCTGGATGAGAACGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp GGCGCCTCCATCGCGGGCCTCCACCACCAACTGGTGCCAGGCCTGTaGCTCGCGGTCCAGAGGTCTCCACACTCGCACCACGCCGCTCAG +
Preference number: 5 (lower is better)
Translates to: GASIAGLHHQLVPGL*LAVQRSPHSHHAAQ
Trigger: CTGAGCGGCGTGGTGCGAGTGTGGAGACCTCTGGACCGCGAGGCACAGGCCTGGCACCAGTTGGTGGTGGAGGCCCGCGATGGAGGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp TGCACGCCTTGGTCCTCGGCCCTGAGAGTCAGCGTGAGCTCCCGCTaGTCGCCCGCGCCCAGGCTGCCGTTGAGGAACAGCACCCCCAGG +
Preference number: 5 (lower is better)
Translates to: CTPWSSALRVSVSSR*SPAPRLPLRNSTPR
Trigger: CCTGGGGGTGCTGTTCCTCAACGGCAGCCTGGGCGCGGGCGAGCAGCGGGAGCTCACGCTGACTCTCAGGGCCGAGGACCAAGGCGTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
CDS CCA 90 bp TCCGGCGTCCGGATCGTGGGCAACTGGCAGGCGGAAGGCGGTCCCTaGCGGGCTGAGCTCGGAGACGTCGAGTTGCAGGGAGTCGAGGGG +
Preference number: 5 (lower is better)
Translates to: SGVRIVGNWQAEGGP*RAELGDVELQGVEG
Trigger: CCCCTCGACTCCCTGCAACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGCCTGCCAGTTGCCCACGATCCGGACGCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 90 bp CCGGATCGTGGGCAACTGGCAGGCGGAAGGCGGTCCCTGGCGGGCTaGGCTCGGAGACGTCGAGTTGCAGGGAGTCGAGGGGAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: PDRGQLAGGRRSLAG*ARRRRVAGSRGESG
Trigger: CCCGCTTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGCCTGCCAGTTGCCCACGATCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp CGTGCACCAAGAGCCAGAGCAGGGAGCGCTGCGTCCTGGCGCCGCTaGTGCCTGACCGCCCATGGGGTGTATCTCTCCTCCCGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: RAPRARAGSAASWRR*CLTAHGVYLSSRGA
Trigger: TGCTCCCCGGGAGGAGAGATACACCCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGACGCAGCGCTCCCTGCTCTGGCTCTTGGTGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp GCCGCCCACAGCCACACGTGCACCAAGAGCCAGAGCAGGGAGCGCTaGGTCCTGGCGCCGCTGCTGCCTGACCGCCCATGGGGTGTATCT +
Preference number: 5 (lower is better)
Translates to: AAHSHTCTKSQSRER*VLAPLLPDRPWGVS
Trigger: AGATACACCCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGACGCAGCGCTCCCTGCTCTGGCTCTTGGTGCACGTGTGGCTGTGGGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp GGGGAGTCATCGGAGTCCTCCGACAGAAAGAAGCCGCTCCCCTCCTaGTGCTGCGCGGCCGGCAGCCCGGCGCGGATGTCACCTACCAGC +
Preference number: 5 (lower is better)
Translates to: GESSESSDRKKPLPS*CCAAGSPARMSPTS
Trigger: GCTGGTAGGTGACATCCGCGCCGGGCTGCCGGCCGCGCAGCAGCAGGAGGGGAGCGGCTTCTTTCTGTCGGAGGACTCCGATGACTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp AGCAGGGAGCGCTGCGTCCTGGCGCCGCTGCTGCCTGACCGCCCATaGGGTGTATCTCTCCTCCCGGGGAGCAGAAGGAGCTTCCCGACC +
Preference number: 5 (lower is better)
Translates to: SRERCVLAPLLPDRP*GVSLLPGSRRSFPT
Trigger: GGTCGGGAAGCTCCTTCTGCTCCCCGGGAGGAGAGATACACCCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGACGCAGCGCTCCCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 90 bp CAAGAGCCAGAGCAGGGAGCGCTGCGTCCTGGCGCCGCTGCTGCCTaGCCGCCCATGGGGTGTATCTCTCCTCCCGGGGAGCAGAAGGAG +
Preference number: 5 (lower is better)
Translates to: QEPEQGALRPGAAAA*PPMGCISPPGEQKE
Trigger: CTCCTTCTGCTCCCCGGGAGGAGAGATACACCCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGACGCAGCGCTCCCTGCTCTGGCTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp TTGAACAACTGGGCAGAGGAGCCCGAGGCCGCCCACAGCCACACGTaGACCAAGAGCCAGAGCAGGGAGCGCTGCGTCCTGGCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LNNWAEEPEAAHSHT*TKSQSRERCVLAPL
Trigger: CAGCGGCGCCAGGACGCAGCGCTCCCTGCTCTGGCTCTTGGTGCACGTGTGGCTGTGGGCGGCCTCGGGCTCCTCTGCCCAGTTGTTCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp TCATCGGAGTCCTCCGACAGAAAGAAGCCGCTCCCCTCCTGCTGCTaGGCGGCCGGCAGCCCGGCGCGGATGTCACCTACCAGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: SSESSDRKKPLPSCC*AAGSPARMSPTSVS
Trigger: GGACACGCTGGTAGGTGACATCCGCGCCGGGCTGCCGGCCGCGCAGCAGCAGGAGGGGAGCGGCTTCTTTCTGTCGGAGGACTCCGATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp GAGTCATCGGAGTCCTCCGACAGAAAGAAGCCGCTCCCCTCCTGCTaGTGCGCGGCCGGCAGCCCGGCGCGGATGTCACCTACCAGCGTG +
Preference number: 5 (lower is better)
Translates to: ESSESSDRKKPLPSC*CAAGSPARMSPTSV
Trigger: CACGCTGGTAGGTGACATCCGCGCCGGGCTGCCGGCCGCGCAGCAGCAGGAGGGGAGCGGCTTCTTTCTGTCGGAGGACTCCGATGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp GTAGCCCTGAGTGCTGAACAGTCCGGCGTCCGGATCGTGGGCAACTaGCAGGCGGAAGGCGGTCCCTGGCGGGCTGAGCTCGGAGACGTC +
Preference number: 5 (lower is better)
Translates to: VALSAEQSGVRIVGN*QAEGGPWRAELGDV
Trigger: GACGTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGCCTGCCAGTTGCCCACGATCCGGACGCCGGACTGTTCAGCACTCAGGGCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 90 bp CTCCCGGGGAGCAGAAGGAGCTTCCCGACCGGAGCCCGCCGCTGCTaGCGCCCTTCGCCCATCTTCCGCCCACAAGGGCTCATTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LPGSRRSFPTGARRC*RPSPIFRPQGLISP
Trigger: AGGAGAAATGAGCCCTTGTGGGCGGAAGATGGGCGAAGGGCGTCAGCAGCGGCGGGCTCCGGTCGGGAAGCTCCTTCTGCTCCCCGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS GCA 90 bp AGGCGGAAGGCGGTCCCTGGCGGGCTGAGCTCGGAGACGTCGAGTTaGAGGGAGTCGAGGGGAAAGCGGGGCGAGTGGTCATTCACGTCG +
Preference number: 5 (lower is better)
Translates to: RRKAVPGGLSSETSS*RESRGKRGEWSFTS
Trigger: CGACGTGAATGACCACTCGCCCCGCTTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp TCCAGGCGCCGCGCAGTGCGGATGATGCCGGTGTCCGGGTGCACGTaGAAGTCGTCCAGCAGCGGGGAGTCATCGGAGTCCTCCGACAGA +
Preference number: 5 (lower is better)
Translates to: SRRRAVRMMPVSGCT*KSSSSGESSESSDR
Trigger: TCTGTCGGAGGACTCCGATGACTCCCCGCTGCTGGACGACTTCCACGTGCACCCGGACACCGGCATCATCCGCACTGCGCGGCGCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 90 bp CCTTGGGCAGGTCGGACGGTTGCACCAGGGTGTAGCCCTGAGTGCTaGACAGTCCGGCGTCCGGATCGTGGGCAACTGGCAGGCGGAAGG +
Preference number: 5 (lower is better)
Translates to: PWAGRTVAPGCSPEC*TVRRPDRGQLAGGR
Trigger: CCTTCCGCCTGCCAGTTGCCCACGATCCGGACGCCGGACTGTTCAGCACTCAGGGCTACACCCTGGTGCAACCGTCCGACCTGCCCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp AGGAACAGCACCCCCAGGGCTCTGTCGATGGCAAAGACGCCTGGCTaGGGGCTGGCGATGGAGTACCGGATGAGTCCGTTCCGCCCACTG +
Preference number: 5 (lower is better)
Translates to: RNSTPRALSMAKTPG*GLAMEYRMSPFRPL
Trigger: CAGTGGGCGGAACGGACTCATCCGGTACTCCATCGCCAGCCCGCAGCCAGGCGTCTTTGCCATCGACAGAGCCCTGGGGGTGCTGTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS CCA 90 bp GTTGAGGAACAGCACCCCCAGGGCTCTGTCGATGGCAAAGACGCCTaGCTGCGGGCTGGCGATGGAGTACCGGATGAGTCCGTTCCGCCC +
Preference number: 5 (lower is better)
Translates to: VEEQHPQGSVDGKDA*LRAGDGVPDESVPP
Trigger: GGGCGGAACGGACTCATCCGGTACTCCATCGCCAGCCCGCAGCCAGGCGTCTTTGCCATCGACAGAGCCCTGGGGGTGCTGTTCCTCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS TCA 90 bp CGATGGCAAAGACGCCTGGCTGCGGGCTGGCGATGGAGTACCGGATaGGTCCGTTCCGCCCACTGTCTCTGTCTTCCGCACGTGCGAGGT +
Preference number: 5 (lower is better)
Translates to: RWQRRLAAGWRWSTG*VRSAHCLCLPHVRG
Trigger: ACCTCGCACGTGCGGAAGACAGAGACAGTGGGCGGAACGGACTCATCCGGTACTCCATCGCCAGCCCGCAGCCAGGCGTCTTTGCCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS CCA 90 bp TCCGGGGGAAGCCCCTCATCTACGGAAAGGGTGAGGTTGAACAACTaGGCAGAGGAGCCCGAGGCCGCCCACAGCCACACGTGCACCAAG +
Preference number: 5 (lower is better)
Translates to: SGGSPSSTERVRLNN*AEEPEAAHSHTCTK
Trigger: CTTGGTGCACGTGTGGCTGTGGGCGGCCTCGGGCTCCTCTGCCCAGTTGTTCAACCTCACCCTTTCCGTAGATGAGGGGCTTCCCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp GTAGCAGCGTCTCCTCCGTGCTCAGCGGCGGGGACCCCGCGTCCGTaGCCACCAGTAGTAACTCATACAGATCGCGGCTCTCTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: VAASPPCSAAGTPRP*PPVVTHTDRGSLCP
Trigger: TGGACAGAGAGAGCCGCGATCTGTATGAGTTACTACTGGTGGCCACGGACGCGGGGTCCCCGCCGCTGAGCACGGAGGAGACGCTGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 90 bp CGCCCGGTCGGGCGCCTTCAGAGACACGGGCGACGCCTCCCTCTGTaGGAAAGAGCACGTGAATTGCTGGCCGGTTGTCATTCACGTCCA +
Preference number: 5 (lower is better)
Translates to: RPVGRLQRHGRRLPL*ERARELLAGCHSRP
Trigger: TGGACGTGAATGACAACCGGCCAGCAATTCACGTGCTCTTTCTCACAGAGGGAGGCGTCGCCCGTGTCTCTGAAGGCGCCCGACCGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp GGCTCTCCGAGGTCCTGGGCCACCACTTTCAGCTCCACCGCCTCCTaGACCTCTCGGTCTAGAGTCCGGATAGTGCTGATCGCACCGCTT +
Preference number: 5 (lower is better)
Translates to: GSPRSWATTFSSTAS*TSRSRVRIVLIAPL
Trigger: AAGCGGTGCGATCAGCACTATCCGGACTCTAGACCGAGAGGTCCAGGAGGCGGTGGAGCTGAAAGTGGTGGCCCAGGACCTCGGAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGGGCCTGCGGGGTCCTaGGGCAGGTCGGACGGTTGC +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDGPAGS*GRSDGC
Trigger: GCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCCC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTACCCGCCCCAGGCACTaGCCGGGCGCGGACGCTGTA +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDATRPRH*PGADAV
Trigger: TACAGCGTCCGCGCCCGGCAAGTGCCTGGGGCGGGT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS GCA 90 bp CGAGAGTTGGACTACAGTGTAGCGCAGCCAGGCGTGATCACTGCCTaGCTCGTCGGCATCGGAGGCGCTGACCCACATGACTACAGTGCC +
Preference number: 5 (lower is better)
Translates to: RELDYSVAQPGVITA*LVGIGGADPHDYSA
Trigger: GGCACTGTAGTCATGTGGGTCAGCGCCTCCGATGCCGACGAGGCAGGCAGTGATCACGCCTGGCTGCGCTACACTGTAGTCCAACTCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp TCGGAGACGTCGAGTTGCAGGGAGTCGAGGGGAAAGCGGGGCGAGTaGTCATTCACGTCGTTGACGCGAATCTCCACCTGCACCACAGCG +
Preference number: 5 (lower is better)
Translates to: SETSSCRESRGKRGE*SFTSLTRISTCTTA
Trigger: CGCTGTGGTGCAGGTGGAGATTCGCGTCAACGACGTGAATGACCACTCGCCCCGCTTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp ATTGACATCCATGACTGTTATGTTGACCTCGGTGCTGCTGCAGGCTaGGGCGCTGCCGAGCTGCGCCTGCACCGTGAGCACAACCACGGG +
Preference number: 5 (lower is better)
Translates to: IDIHDCYVDLGAAAG*GAAELRLHREHNHG
Trigger: CCCGTGGTTGTGCTCACGGTGCAGGCGCAGCTCGGCAGCGCCCCAGCCTGCAGCAGCACCGAGGTCAACATAACAGTCATGGATGTCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000504580.1
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638365.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS TCA 90 bp TGTTCGCGTTTCTCGATAACGACTGTCAGCACCAGCAGGGCTGCCTaGGGATGCACGCCTTGGTCCTCGGCCCTGAGAGTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: CSRFSITTVSTSRAA*GCTPWSSALRVSVS
Trigger: GCTCACGCTGACTCTCAGGGCCGAGGACCAAGGCGTGCATCCTCAGGCAGCCCTGCTGGTGCTGACAGTCGTTATCGAGAAACGCGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
CDS GCA 90 bp GTACCGGATGAGTCCGTTCCGCCCACTGTCTCTGTCTTCCGCACGTaGGAGGTACAAGGCTGTGCCAGGGGGCGTGGTCTGGGATATTCT +
Preference number: 5 (lower is better)
Translates to: VPDESVPPTVSVFRT*EVQGCARGRGLGYS
Trigger: AGAATATCCCAGACCACGCCCCCTGGCACAGCCTTGTACCTCGCACGTGCGGAAGACAGAGACAGTGGGCGGAACGGACTCATCCGGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS GCA 90 bp GCTGTGTTCGCGTTTCTCGATAACGACTGTCAGCACCAGCAGGGCTaGCTGAGGATGCACGCCTTGGTCCTCGGCCCTGAGAGTCAGCGT +
Preference number: 5 (lower is better)
Translates to: AVFAFLDNDCQHQQG*LRMHALVLGPESQR
Trigger: ACGCTGACTCTCAGGGCCGAGGACCAAGGCGTGCATCCTCAGGCAGCCCTGCTGGTGCTGACAGTCGTTATCGAGAAACGCGAACACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
CDS CCA 90 bp ACAGAGAGATGCTCCCGTCTCCAAGACCCACACCAAGCTCCCCTGTaGCCTCATCTTCCTTCTCCCAGTCACCGTCCGCGTCAGACACCG +
Preference number: 5 (lower is better)
Translates to: TERCSRLQDPHQAPL*PHLPSPSHRPRQTP
Trigger: CGGTGTCTGACGCGGACGGTGACTGGGAGAAGGAAGATGAGGCCACAGGGGAGCTTGGTGTGGGTCTTGGAGACGGGAGCATCTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp ATTCACATCATCTACGGTGATGCTCACCAGGCAGGTGGCAGAGAGTaGGGGCTCTCCGAGGTCCTGGGCCACCACTTTCAGCTCCACCGC +
Preference number: 5 (lower is better)
Translates to: IHIIYGDAHQAGGRE*GLSEVLGHHFQLHR
Trigger: GCGGTGGAGCTGAAAGTGGTGGCCCAGGACCTCGGAGAGCCCCCACTCTCTGCCACCTGCCTGGTGAGCATCACCGTAGATGATGTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp CGTCCTCTGCCTGCAGCTCACGCAGACAGGGAAGTAAGCTCTAGCTaGCTCTGCCGCGGCAGCCACCTCTTCTGCCCCTGGATTTCTTTA +
Preference number: 5 (lower is better)
Translates to: RPLPAAHADREVSSS*LCRGSHLFCPWISL
Trigger: TAAAGAAATCCAGGGGCAGAAGAGGTGGCTGCCGCGGCAGAGGCAGCTAGAGCTTACTTCCCTGTCTGCGTGAGCTGCAGGCAGAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS GCA 90 bp GTAGCAACGCGAAGTCTCCCTCTCCGCCTTCCAAGGACAGAGAGATaGTCCCGTCTCCAAGACCCACACCAAGCTCCCCTGTGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: VATRSLPLRLPRTER*SRLQDPHQAPLWPH
Trigger: ATGAGGCCACAGGGGAGCTTGGTGTGGGTCTTGGAGACGGGAGCATCTCTCTGTCCTTGGAAGGCGGAGAGGGAGACTTCGCGTTGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp GATGGGAGAGCGTGGGTGTTTCGGAGGCACCTGCCCCAGGTTTACTaGCGGCATTCTTGGTGGGACTGCTTTAATCCCAGGCTGGGCTAC +
Preference number: 5 (lower is better)
Translates to: DGRAWVFRRHLPQVY*RHSWWDCFNPRLGY
Trigger: GTAGCCCAGCCTGGGATTAAAGCAGTCCCACCAAGAATGCCGGCAGTAAACCTGGGGCAGGTGCCTCCGAAACACCCACGCTCTCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp TCGCCCATCTTCCGCCCACAAGGGCTCATTTCTCCTCCAGCTCCTTaGGAAGGCTCTCGGGTAACTGCCAGCTTGTGGCAGGATCGCAGA +
Preference number: 5 (lower is better)
Translates to: SPIFRPQGLISPPAP*EGSRVTASLWQDRR
Trigger: TCTGCGATCCTGCCACAAGCTGGCAGTTACCCGAGAGCCTTCCCAAGGAGCTGGAGGAGAAATGAGCCCTTGTGGGCGGAAGATGGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CCA 90 bp TCTTCCGCACGTGCGAGGTACAAGGCTGTGCCAGGGGGCGTGGTCTaGGATATTCTAATCTCATCCGAGGTCCTGAGGAACGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SSARARYKAVPGGVV*DILISSEVLRNAGW
Trigger: CCACCCAGCGTTCCTCAGGACCTCGGATGAGATTAGAATATCCCAGACCACGCCCCCTGGCACAGCCTTGTACCTCGCACGTGCGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS CCA 90 bp TCGGCAGTCACCATCACATCAGTTTCCCCAGATAGGCAGGAGAGCTaGTCTGAGTCCCTCGGGATACCCGAGTCTGGCACCCTGGACTCG +
Preference number: 5 (lower is better)
Translates to: SAVTITSVSPDRQES*SESLGIPESGTLDS
Trigger: CGAGTCCAGGGTGCCAGACTCGGGTATCCCGAGGGACTCAGACCAGCTCTCCTGCCTATCTGGGGAAACTGATGTGATGGTGACTGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 90 bp GCTGACCCACATGACTACAGTGCCAGGGGCCGCGGCCTCGGACACTaGGGCCTTGTAATGCTGTTGGCTGAAGAGAGGTGGTTGGTCATT +
Preference number: 5 (lower is better)
Translates to: ADPHDYSARGRGLGH*GLVMLLAEERWLVI
Trigger: AATGACCAACCACCTCTCTTCAGCCAACAGCATTACAAGGCCTCAGTGTCCGAGGCCGCGGCCCCTGGCACTGTAGTCATGTGGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp CACACTCTGCGGTGTGGACCATCTTTGATTGCAGGGAGCCGAGATTaGAGGGAGCCGAGAGTTGGACTACAGTGTAGCGCAGCCAGGCGT +
Preference number: 5 (lower is better)
Translates to: HTLRCGPSLIAGSRD*REPRVGLQCSAARR
Trigger: ACGCCTGGCTGCGCTACACTGTAGTCCAACTCTCGGCTCCCTGCAATCTCGGCTCCCTGCAATCAAAGATGGTCCACACCGCAGAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp AGCGAGTACCTAAGAGGCGAGGCTGCACGCTGGGGGCCAAGTGGGTaGGCCTGTGTTTGCAGCATTTGTGTCATCGGTGAGAGAGACTCA +
Preference number: 5 (lower is better)
Translates to: SEYLRGEAARWGPSG*ACVCSICVIGERDS
Trigger: TGAGTCTCTCTCACCGATGACACAAATGCTGCAAACACAGGCGCACCCACTTGGCCCCCAGCGTGCAGCCTCGCCTCTTAGGTACTCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS GCA 90 bp CGGAGGCACCTGCCCCAGGTTTACTGCCGGCATTCTTGGTGGGACTaGTTTAATCCCAGGCTGGGCTACTGCTGTTATCAAAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: RRHLPQVYCRHSWWD*FNPRLGYCCYQRGW
Trigger: CCACCCCCTTTGATAACAGCAGTAGCCCAGCCTGGGATTAAAGCAGTCCCACCAAGAATGCCGGCAGTAAACCTGGGGCAGGTGCCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp AGGAGAGCTGGTCTGAGTCCCTCGGGATACCCGAGTCTGGCACCCTaGACTCGTGGTCACTCAGAGCTGAGTCTGAGCACTTTCTGTAGG +
Preference number: 5 (lower is better)
Translates to: RRAGLSPSGYPSLAP*TRGHSELSLSTFCR
Trigger: CCTACAGAAAGTGCTCAGACTCAGCTCTGAGTGACCACGAGTCCAGGGTGCCAGACTCGGGTATCCCGAGGGACTCAGACCAGCTCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp CATGCCTTCTGGCAGAGAACCAAGATGGTAGGGGATGGGAGAGCGTaGGTGTTTCGGAGGCACCTGCCCCAGGTTTACTGCCGGCATTCT +
Preference number: 5 (lower is better)
Translates to: HAFWQRTKMVGDGRA*VFRRHLPQVYCRHS
Trigger: AGAATGCCGGCAGTAAACCTGGGGCAGGTGCCTCCGAAACACCCACGCTCTCCCATCCCCTACCATCTTGGTTCTCTGCCAGAAGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTGAGGATGCACGCCTaGGTCCTCGGCCCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALRMHA*VLGPES
Trigger: ACTCTCAGGGCCGAGGACCAAGGCGTGCATCCTCAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp CCTGCCTCCAGAAGATGGGCTCATTGTCATTCACATCATCTACGGTaGTGCTCACCAGGCAGGTGGCAGAGAGTGGGGGCTCTCCGAGGT +
Preference number: 5 (lower is better)
Translates to: PASRRWAHCHSHHLR*CSPGRWQRVGALRG
Trigger: ACCTCGGAGAGCCCCCACTCTCTGCCACCTGCCTGGTGAGCATCACCGTAGATGATGTGAATGACAATGAGCCCATCTTCTGGAGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 90 bp CTGCCTGCAGCTCACGCAGACAGGGAAGTAAGCTCTAGCTGCCTCTaGCGCGGCAGCCACCTCTTCTGCCCCTGGATTTCTTTAAACGAA +
Preference number: 5 (lower is better)
Translates to: LPAAHADREVSSSCL*RGSHLFCPWISLNE
Trigger: TTCGTTTAAAGAAATCCAGGGGCAGAAGAGGTGGCTGCCGCGGCAGAGGCAGCTAGAGCTTACTTCCCTGTCTGCGTGAGCTGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS GCA 90 bp GCATCAGAGGCTGTCACCTGCAGAAAGCAGTGTCCAACCGGGGCATaGTCTGCAATGGTGGCATTGTACACCTGCCTCCAGAAGATGGGC +
Preference number: 5 (lower is better)
Translates to: ASEAVTCRKQCPTGA*SAMVALYTCLQKMG
Trigger: GCCCATCTTCTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGTTGGACACTGCTTTCTGCAGGTGACAGCCTCTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CCA 90 bp TTTCGTGGTGGGGAGCCGCGGTCTGTCACTAGCACAGTCATCTCATaGTGCCCCCGGTGCTCACGATCCAGTGCCACCCAATTGATTAAC +
Preference number: 5 (lower is better)
Translates to: FRGGEPRSVTSTVIS*CPRCSRSSATQLIN
Trigger: GTTAATCAATTGGGTGGCACTGGATCGTGAGCACCGGGGGCACCATGAGATGACTGTGCTAGTGACAGACCGCGGCTCCCCACCACGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTCGGAGACGTCGAGTaGCAGGGAGTCGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALGDVE*QGVEGK
Trigger: TTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp ACAAACCGACGGCCCAGGAATTCCCGAGGTTACATCTGCAACTGGTaGAAGCGTCCTCTGCCTGCAGCTCACGCAGACAGGGAAGTAAGC +
Preference number: 5 (lower is better)
Translates to: TNRRPRNSRGYICNW*KRPLPAAHADREVS
Trigger: GCTTACTTCCCTGTCTGCGTGAGCTGCAGGCAGAGGACGCTTTCACCAGTTGCAGATGTAACCTCGGGAATTCCTGGGCCGTCGGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS GCA 90 bp GAGCCGCGGTCTGTCACTAGCACAGTCATCTCATGGTGCCCCCGGTaGTCACGATCCAGTGCCACCCAATTGATTAACTCTCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: EPRSVTSTVISWCPR*SRSSATQLINSPSP
Trigger: AGGAGAAGGAGAGTTAATCAATTGGGTGGCACTGGATCGTGAGCACCGGGGGCACCATGAGATGACTGTGCTAGTGACAGACCGCGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS CCA 90 bp TCTCCTCCAGCTCCTTGGGAAGGCTCTCGGGTAACTGCCAGCTTGTaGCAGGATCGCAGAAAAATCCAGGAGCCTCTTCAGTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SPPAPWEGSRVTASL*QDRRKIQEPLQCLS
Trigger: GCTCAGACACTGAAGAGGCTCCTGGATTTTTCTGCGATCCTGCCACAAGCTGGCAGTTACCCGAGAGCCTTCCCAAGGAGCTGGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CCA 90 bp AATTGGGAGTCATGCCTTCTGGCAGAGAACCAAGATGGTAGGGGATaGGAGAGCGTGGGTGTTTCGGAGGCACCTGCCCCAGGTTTACTG +
Preference number: 5 (lower is better)
Translates to: NWESCLLAENQDGRG*ESVGVSEAPAPGLL
Trigger: CAGTAAACCTGGGGCAGGTGCCTCCGAAACACCCACGCTCTCCCATCCCCTACCATCTTGGTTCTCTGCCAGAAGGCATGACTCCCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAACCCGCCCCAGGCACTaGCCGGGCGCGGACGCTGTA +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKTRPRH*PGADAV
Trigger: TACAGCGTCCGCGCCCGGCAAGTGCCTGGGGCGGGT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGAGCCCACCACCGTCTaGAGCAGAGACCATCAACGA +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDEPTTV*SRDHQR
Trigger: TCGTTGATGGTCTCTGCTCAAGACGGTGGTGGGCTC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS CCA 90 bp CCGCTTTCGGAATCAATGGCAAAAGATGGTCCACACTCTGCGGTGTaGACCATCTTTGATTGCAGGGAGCCGAGATTGCAGGGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: PLSESMAKDGPHSAV*TIFDCREPRLQGAE
Trigger: CTCGGCTCCCTGCAATCTCGGCTCCCTGCAATCAAAGATGGTCCACACCGCAGAGTGTGGACCATCTTTTGCCATTGATTCCGAAAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp GTGTTTCGGAGGCACCTGCCCCAGGTTTACTGCCGGCATTCTTGGTaGGACTGCTTTAATCCCAGGCTGGGCTACTGCTGTTATCAAAGG +
Preference number: 5 (lower is better)
Translates to: VFRRHLPQVYCRHSW*DCFNPRLGYCCYQR
Trigger: CCTTTGATAACAGCAGTAGCCCAGCCTGGGATTAAAGCAGTCCCACCAAGAATGCCGGCAGTAAACCTGGGGCAGGTGCCTCCGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp TGGGTGTTTCGGAGGCACCTGCCCCAGGTTTACTGCCGGCATTCTTaGTGGGACTGCTTTAATCCCAGGCTGGGCTACTGCTGTTATCAA +
Preference number: 5 (lower is better)
Translates to: WVFRRHLPQVYCRHS*WDCFNPRLGYCCYQ
Trigger: TTGATAACAGCAGTAGCCCAGCCTGGGATTAAAGCAGTCCCACCAAGAATGCCGGCAGTAAACCTGGGGCAGGTGCCTCCGAAACACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCGGGTAACTGCCAGCTaGTGGCAGGATCGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDRVTAS*WQDRRK
Trigger: TTTTCTGCGATCCTGCCACAAGCTGGCAGTTACCCG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTGGTCATTCACGTCGTaGACGCGAATCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDWSFTS*TRISTC
Trigger: GCAGGTGGAGATTCGCGTCAACGACGTGAATGACCA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTGGGTGCGCCTGTGTTaGCAGCATTTGTGTCATCGG +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAWVRLC*QHLCHR
Trigger: CCGATGACACAAATGCTGCAAACACAGGCGCACCCA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp CAGGGACCACCTCGTTACTGCAGTCGTCAGTTTTCTGGAAGGCTTTaGGCACACTGGCATCCCGGGTCACTCTCAAGTCCGCATCTAAAG +
Preference number: 5 (lower is better)
Translates to: QGPPRYCSRQFSGRL*AHWHPGSLSSPHLK
Trigger: CTTTAGATGCGGACTTGAGAGTGACCCGGGATGCCAGTGTGCTCAAAGCCTTCCAGAAAACTGACGACTGCAGTAACGAGGTGGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 90 bp GAGCCGCGGTCTGTCACTAGCACAGTCATCTCATGGTGCCCCCGGTaGTCACGATCCAGTGCCACCCAATTGATTAACTCTCCTGTATTA +
Preference number: 5 (lower is better)
Translates to: EPRSVTSTVISWCPR*SRSSATQLINSPVL
Trigger: TAATACAGGAGAGTTAATCAATTGGGTGGCACTGGATCGTGAGCACCGGGGGCACCATGAGATGACTGTGCTAGTGACAGACCGCGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CCA 90 bp CTGTCACCTGCAGAAAGCAGTGTCCAACCGGGGCATGCTCTGCAATaGTGGCATTGTACACCTGCCTCCAGAAGATGGGCTCATTGTCAT +
Preference number: 5 (lower is better)
Translates to: LSPAESSVQPGHALQ*WHCTPASRRWAHCH
Trigger: ATGACAATGAGCCCATCTTCTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGTTGGACACTGCTTTCTGCAGGTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTCAGTGGCAAGAACATaGATGATCTCGGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSVART*MISVPG
Trigger: GCCAGGCACCGAGATCATCAATGTTCTTGCCACTGA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTCCATGACTGTTATGTaGACCTCGGTGCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASMTVM*TSVLLQ
Trigger: CTGCAGCAGCACCGAGGTCAACATAACAGTCATGGA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTTTGCCTATTACCCCTaGGGGAACAGGGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAFAYYP*GNRALF
Trigger: GAAGAGAGCCCTGTTCCCCAAGGGGTAATAGGCAAA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAAAACCACAGTTCCATaGGGCCCCAAGTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDKTTVP*GPKSRS
Trigger: TGACCTGGACTTGGGGCCCAATGGAACTGTGGTTTT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCATCACCTTTGTCTTaGGCTTGGACTGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAASPLS*AWTVRQ
Trigger: CTGCCTCACAGTCCAAGCCAAAGACAAAGGTGATGC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS GCA 90 bp CAGTGTCCAACCGGGGCATGCTCTGCAATGGTGGCATTGTACACCTaGCTCCAGAAGATGGGCTCATTGTCATTCACATCATCTACGGTG +
Preference number: 5 (lower is better)
Translates to: QCPTGACSAMVALYT*LQKMGSLSFTSSTV
Trigger: CACCGTAGATGATGTGAATGACAATGAGCCCATCTTCTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGTTGGACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 90 bp TCACCTGCAGAAAGCAGTGTCCAACCGGGGCATGCTCTGCAATGGTaGCATTGTACACCTGCCTCCAGAAGATGGGCTCATTGTCATTCA +
Preference number: 5 (lower is better)
Translates to: SPAESSVQPGHALQW*HCTPASRRWAHCHS
Trigger: TGAATGACAATGAGCCCATCTTCTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGTTGGACACTGCTTTCTGCAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGGGCCTGCGGGGTCCTaGGGCAGGTCGGACGGTTGC +
Preference number: 5 (lower is better)
Translates to: SWPILFHLFPMYILRFSHGPAGS*GRSDGC
Trigger: GCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCCC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGGCCTGCGGGGTCCTaGGGCAGGTCGGACGGTTGC +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGPAGS*GRSDGC
Trigger: GCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCCC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTACCCGCCCCAGGCACTaGCCGGGCGCGGACGCTGTA +
Preference number: 5 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRTRPRH*PGADAV
Trigger: TACAGCGTCCGCGCCCGGCAAGTGCCTGGGGCGGGT...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATACCCGCCCCAGGCACTaGCCGGGCGCGGACGCTGTA +
Preference number: 5 (lower is better)
Translates to: SWPILFHLFPMYILRFSHTRPRH*PGADAV
Trigger: TACAGCGTCCGCGCCCGGCAAGTGCCTGGGGCGGGT...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGAAAGAGCACGTGAATaGCTGGCCGGTTGTCATTCA +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAERARE*LAGCHS
Trigger: TGAATGACAACCGGCCAGCAATTCACGTGCTCTTTC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCAGTGCAGAGGATTGTaGTGGTGCTGGACAATGAAG +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAQCRGL*WCWTMK
Trigger: CTTCATTGTCCAGCACCACAACAATCCTCTGCACTG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATCCAAAGCACGAGTGGTaGAGAGTTCTCCTGACATCT +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDPKHEW*RVLLTS
Trigger: AGATGTCAGGAGAACTCTCAACCACTCGTGCTTTGG...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGGTAAAATTGCTGATTaGCTCCCGGTCCAAAGCACG +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAGKIAD*LPVQST
Trigger: CGTGCTTTGGACCGGGAGCAAATCAGCAATTTTACC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTTCAGGCCTTCATCCTaGTCCACAGCTGAAAGCACA +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDFRPSS*STAEST
Trigger: TGTGCTTTCAGCTGTGGACAAGGATGAAGGCCTGAA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCAGTTGCATCACCTTaGTCTTTGGCTTGGACTGTG +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAAVASP*SLAWTV
Trigger: CACAGTCCAAGCCAAAGACAAAGGTGATGCAACTGC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCCACTAAGGAGGCAGTaGCATCACCTTTGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAPLRRQ*HHLCLW
Trigger: CCAAAGACAAAGGTGATGCAACTGCCTCCTTAGTGG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp ACTCTCTACGTCAGACATGCTGCTCTCCCTGAATTCATTCTTGCGTaGGGTCCAAGAACCCTCTCTTGGGGTCTAGACCAGGACCAGCAT +
Preference number: 5 (lower is better)
Translates to: TLYVRHAALPEFILA*GPRTLSWGLDQDQH
Trigger: ATGCTGGTCCTGGTCTAGACCCCAAGAGAGGGTTCTTGGACCTCACGCAAGAATGAATTCAGGGAGAGCAGCATGTCTGACGTAGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504580.1
ENST00000638365.1
CDS CCA 90 bp GAGGCTGTCACCTCAGTTTCCTTCACTGGTTTTGCGTTCTCTTCCTaGCTTCTGAACACTATAGCACCCCAGAGCTCAGTCTCGGGACTA +
Preference number: 5 (lower is better)
Translates to: EAVTSVSFTGFAFSS*LLNTIAPQSSVSGL
Trigger: TAGTCCCGAGACTGAGCTCTGGGGTGCTATAGTGTTCAGAAGCCAGGAAGAGAACGCAAAACCAGTGAAGGAAACTGAGGTGACAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGGGCCTGCGGGGTCCTaGGGCAGGTCGGACGGTTGC +
Preference number: 5 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSGPAGS*GRSDGC
Trigger: GCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCCC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAGTTCAAGGGCTCTCTaGCTTTCACTGTTCCAATGG +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSSRAL*LSLFQW
Trigger: CCATTGGAACAGTGAAAGCAAGAGAGCCCTTGAACT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTGCCGTCATCATCTTaGGCATTGAAGACATACACC +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALPSSS*ALKTYT
Trigger: GGTGTATGTCTTCAATGCCAAAGATGATGACGGCAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTGTCAAGTATGGTGGTaGTCACTACCTCTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDCQVWW*SLPLQC
Trigger: ACACTGGAGAGGTAGTGACAACCACCATACTTGACA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTATGACAAGGGTAAAATaGCTGATTTGCTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAMTRVK*LICSRS
Trigger: GGACCGGGAGCAAATCAGCAATTTTACCCTTGTCAT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATACTGGTGGATTATCATaGACATCCAGCACACGGACT +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDTGGLS*TSSTRT
Trigger: AGTCCGTGTGCTGGATGTCAATGATAATCCACCAGT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCAAGAGGTTGGAATTaGGGCTCCCAACTAAGAAGA +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAARGWN*GSQLRR
Trigger: TCTTCTTAGTTGGGAGCCCAAATTCCAACCTCTTGC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAGAGATGGAGAAAAATaGGGAGTCATGCCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDRDGEK*GVMPSG
Trigger: GCCAGAAGGCATGACTCCCAATTTTTCTCCATCTCT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTACTTGTTTGGTGGCATaGTGGCACTGGATACAGACT +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDATCLVA*WHWIQT
Trigger: AGTCTGTATCCAGTGCCACAATGCCACCAAACAAGT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTACTTGTAGTACTTGTTaGGTGGCATTGTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDATCSTC*VALWHW
Trigger: CCAGTGCCACAATGCCACCAAACAAGTACTACAAGT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATACTTGTAGTACTTGTTaGGTGGCATTGTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDTCSTC*VALWHW
Trigger: CCAGTGCCACAATGCCACCAAACAAGTACTACAAGT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp GAACCCTGGATGCTACAGTCTCTGGCCACAGCACTAAATGTATGCTaGGATCTGGCTTCACGGTCGAGGGTGTTGCTGGTTTTCAATGTG +
Preference number: 5 (lower is better)
Translates to: EPWMLQSLATALNVC*DLASRSRVLLVFNV
Trigger: CACATTGAAAACCAGCAACACCCTCGACCGTGAAGCCAGATCTCAGCATACATTTAGTGCTGTGGCCAGAGACTGTAGCATCCAGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp CAGGAGCCTCTTCAGTGTCTGAGCCAGAGAAGAAAAGACTTTGTTTaGCAAACAAACCGACGGCCCAGGAATTCCCGAGGTTACATCTGC +
Preference number: 5 (lower is better)
Translates to: QEPLQCLSQRRKDFV*QTNRRPRNSRGYIC
Trigger: GCAGATGTAACCTCGGGAATTCCTGGGCCGTCGGTTTGTTTGCCAAACAAAGTCTTTTCTTCTCTGGCTCAGACACTGAAGAGGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTTTACATCTGTTCCTaGTTCTACTCGGCTGGTTGT +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALYICS*FYSAGC
Trigger: ACAACCAGCCGAGTAGAACAAGGAACAGATGTAAAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAGGGCAGGTCGGACGGTaGCACCAGGGTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRGQVGR*HQGVAL
Trigger: CAGGGCTACACCCTGGTGCAACCGTCCGACCTGCCC...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGGGCAGGTCGGACGGTaGCACCAGGGTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SWPILFHLFPMYILRFSHGQVGR*HQGVAL
Trigger: CAGGGCTACACCCTGGTGCAACCGTCCGACCTGCCC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGCAGGGAGCCGAGAGTaGGACTACAGTGTAGCGCAG +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKAGSRE*DYSVAQ
Trigger: CTGCGCTACACTGTAGTCCAACTCTCGGCTCCCTGC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTCTGAGGATGCACGCCTaGGTCCTCGGCCCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: SRVHHLASTMISSWPILFLRMHA*VLGPES
Trigger: ACTCTCAGGGCCGAGGACCAAGGCGTGCATCCTCAG...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAAGGGCCTGTTATCATaGATGTCAGTAACTGAGACG +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDKGLLS*MSVTET
Trigger: CGTCTCAGTTACTGACATCAATGATAACAGGCCCTT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp GCTTGTGGCAGGATCGCAGAAAAATCCAGGAGCCTCTTCAGTGTCTaGGCCAGAGAAGAAAAGACTTTGTTTGGCAAACAAACCGACGGC +
Preference number: 5 (lower is better)
Translates to: ACGRIAEKSRSLFSV*AREEKTLFGKQTDG
Trigger: GCCGTCGGTTTGTTTGCCAAACAAAGTCTTTTCTTCTCTGGCTCAGACACTGAAGAGGCTCCTGGATTTTTCTGCGATCCTGCCACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS TCA 90 bp GCGCCTGTGTTTGCAGCATTTGTGTCATCGGTGAGAGAGACTCACTaGCTTCCACTTGATAGACCAAATGTTCGAAAGTCCAGGATGGGC +
Preference number: 5 (lower is better)
Translates to: APVFAAFVSSVRETH*LPLDRPNVRKSRMG
Trigger: GCCCATCCTGGACTTTCGAACATTTGGTCTATCAAGTGGAAGTCAGTGAGTCTCTCTCACCGATGACACAAATGCTGCAAACACAGGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS TCA 90 bp AGATCTGGCTTCACGGTCGAGGGTGTTGCTGGTTTTCAATGTGCCTaGCATAGGATCAATGGTGAATGCACCAGAAGCCTCATCAGTCAG +
Preference number: 5 (lower is better)
Translates to: RSGFTVEGVAGFQCA*HRINGECTRSLISQ
Trigger: CTGACTGATGAGGCTTCTGGTGCATTCACCATTGATCCTATGTCAGGCACATTGAAAACCAGCAACACCCTCGACCGTGAAGCCAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 90 bp TCATCCAGTAGTCCATACTCTCTACGTCAGACATGCTGCTCTCCCTaGATTCATTCTTGCGTGAGGTCCAAGAACCCTCTCTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: SSSSPYSLRQTCCSP*IHSCVRSKNPLLGS
Trigger: AGACCCCAAGAGAGGGTTCTTGGACCTCACGCAAGAATGAATTCAGGGAGAGCAGCATGTCTGACGTAGAGAGTATGGACTACTGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504580.1
ENST00000638365.1
CDS GCA 90 bp TCTCCCAGGTCAGAGCACAGAATGACAAGGGTAAAATTGCTGATTTaGTCCCGGTCCAAAGCACGAGTGGTTGAGAGTTCTCCTGACATC +
Preference number: 5 (lower is better)
Translates to: SPRSEHRMTRVKLLI*SRSKARVVESSPDI
Trigger: GATGTCAGGAGAACTCTCAACCACTCGTGCTTTGGACCGGGAGCAAATCAGCAATTTTACCCTTGTCATTCTGTGCTCTGACCTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 90 bp GCAGCCACTGTCAGATGCCAGAATGACAAGCTCATGGCTAGCACTTaGTTCTCTGTCCAGACTGTGAAGCAACACAAGATAACCGACTTG +
Preference number: 5 (lower is better)
Translates to: AATVRCQNDKLMAST*FSVQTVKQHKITDL
Trigger: CAAGTCGGTTATCTTGTGTTGCTTCACAGTCTGGACAGAGAAGCAAGTGCTAGCCATGAGCTTGTCATTCTGGCATCTGACAGTGGCTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 90 bp AGAACTGAATGCAAAGTCTGTCCCACTAAAGGCAGCAGCACCATCTaGCCAGGTTATGACATAGATGGTGCCTGCTGGACCTGTATTAGG +
Preference number: 5 (lower is better)
Translates to: RTECKVCPTKGSSTI*PGYDIDGACWTCIR
Trigger: CCTAATACAGGTCCAGCAGGCACCATCTATGTCATAACCTGGGCAGATGGTGCTGCTGCCTTTAGTGGGACAGACTTTGCATTCAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS CCA 90 bp CTCACTGACTTCCACTTGATAGACCAAATGTTCGAAAGTCCAGGATaGGCTGTGTTCGCGTTTCTCGATAACGACTGTCAGCACCAGCAG +
Preference number: 5 (lower is better)
Translates to: LTDFHLIDQMFESPG*AVFAFLDNDCQHQQ
Trigger: CTGCTGGTGCTGACAGTCGTTATCGAGAAACGCGAACACAGCCCATCCTGGACTTTCGAACATTTGGTCTATCAAGTGGAAGTCAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
CDS CCA 90 bp CTGCTCATCCCCATCCTTAGCTTCCACCAGGAGATCATAGGTAGCTaGATCCCTTTCCCTGTCGATATCTTGAGAAACACAGATTTGCCC +
Preference number: 5 (lower is better)
Translates to: LLIPILSFHQEIIGS*IPFPVDILRNTDLP
Trigger: GGGCAAATCTGTGTTTCTCAAGATATCGACAGGGAAAGGGATCCAGCTACCTATGATCTCCTGGTGGAAGCTAAGGATGGGGATGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCAAAGACCGGCGGGTaGTCGTTCTCATCCAGCACG +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSKTGG*SFSSST
Trigger: CGTGCTGGATGAGAACGACAACCCGCCGGTCTTTGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGAGCCCACCACCGTCTaGAGCAGAGACCATCAACGA +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKEPTTV*SRDHQR
Trigger: TCGTTGATGGTCTCTGCTCAAGACGGTGGTGGGCTC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTCAATAGCTGTAATTTaGCCTATTACCCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDASIAVI*PITPWG
Trigger: TCCCCAAGGGGTAATAGGCAAAATTACAGCTATTGA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATTCCAGTGCCACCCAATaGATTAACTCTCCTGTATTA +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDSSATQ*INSPVL
Trigger: TAATACAGGAGAGTTAATCAATTGGGTGGCACTGGA...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGAAACAAGTCTCCGGTaGAGCTGTCTATTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAETSLR*SCLFQS
Trigger: ACTTTGAAATAGACAGCTCAACCGGAGACTTGTTTC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGCCCAGGAATCTGTTTaGGAAGCCAATTCAATGATT +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAAQESV*EANSMI
Trigger: AATCATTGAATTGGCTTCCAAAACAGATTCCTGGGC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp TGTGCTGTCAGTGATCTCAGTCGCCGGTCTGTCACATTCACAGCCTaGTCAGATGCTGTTACTGTCAGGATGACAGTTGGAATGCTTTCT +
Preference number: 5 (lower is better)
Translates to: CAVSDLSRRSVTFTA*SDAVTVRMTVGMLS
Trigger: AGAAAGCATTCCAACTGTCATCCTGACAGTAACAGCATCTGATCAGGCTGTGAATGTGACAGACCGGCGACTGAGATCACTGACAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 90 bp AGGATGCTGTATGTTACTTTTCCATTCCTTCCTTCGTCTGGATCGTaGGCAGTTATGTGGTGGACCAAGGAGCCCACTGTGACATCCTCT +
Preference number: 5 (lower is better)
Translates to: RMLYVTFPFLPSSGS*AVMWWTKEPTVTSS
Trigger: AGAGGATGTCACAGTGGGCTCCTTGGTCCACCACATAACTGCTCACGATCCAGACGAAGGAAGGAATGGAAAAGTAACATACAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp CGTGATCGTTTTCATCTTCAACAGTGCAGAGGATTGTTGTGGTGCTaGACAATGAAGGGAATCCCCCATCTCGTACTAGTACTCGAAGGG +
Preference number: 5 (lower is better)
Translates to: RDRFHLQQCRGLLWC*TMKGIPHLVLVLEG
Trigger: CCCTTCGAGTACTAGTACGAGATGGGGGATTCCCTTCATTGTCCAGCACCACAACAATCCTCTGCACTGTTGAAGATGAAAACGATCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp CTGGTGCGTGATCGTTTTCATCTTCAACAGTGCAGAGGATTGTTGTaGTGCTGGACAATGAAGGGAATCCCCCATCTCGTACTAGTACTC +
Preference number: 5 (lower is better)
Translates to: LVRDRFHLQQCRGLL*CWTMKGIPHLVLVL
Trigger: GAGTACTAGTACGAGATGGGGGATTCCCTTCATTGTCCAGCACCACAACAATCCTCTGCACTGTTGAAGATGAAAACGATCACGCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp GAGTCCTGTGGTGGAGTCAATGGTAAAAAGGGACGACACGTTTCCTaGAATAAGCTCATAAGCCACTGTCCCATATATCCCAGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: ESCGGVNGKKGRHVS*NKLISHCPIYPRVL
Trigger: CAGGACTCTGGGATATATGGGACAGTGGCTTATGAGCTTATTCCAGGAAACGTGTCGTCCCTTTTTACCATTGACTCCACCACAGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS-3UTR CAA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTCGGGTAACTGCCAGCTaGTGGCAGGATCGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLRVTAS*WQDRRK
Trigger: TTTTCTGCGATCCTGCCACAAGCTGGCAGTTACCCG...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAACGGAAAGGGTGAGGTaGAACAACTGGGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKTERVR*NNWAEE
Trigger: CTCCTCTGCCCAGTTGTTCAACCTCACCCTTTCCGT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATGGTCATTCACGTCGTaGACGCGAATCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKWSFTS*TRISTC
Trigger: GCAGGTGGAGATTCGCGTCAACGACGTGAATGACCA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGGCAGGTCGGACGGTaGCACCAGGGTGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGQVGR*HQGVAL
Trigger: CAGGGCTACACCCTGGTGCAACCGTCCGACCTGCCC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGCTGAAGAGAGGTGGTaGGTCATTGAGGTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKAEERW*VIEVSD
Trigger: GTCGCTGACCTCAATGACCAACCACCTCTCTTCAGC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATTGCAGGGAGCCGAGATaGCAGGGAGCCGAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: SWPILFHLFPMYILRFSHCREPR*QGAESW
Trigger: CCAACTCTCGGCTCCCTGCAATCTCGGCTCCCTGCA...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTGCAGGGAGCCGAGATaGCAGGGAGCCGAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCCREPR*QGAESW
Trigger: CCAACTCTCGGCTCCCTGCAATCTCGGCTCCCTGCA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACGGTGTGGACCATCTTaGATTGCAGGGAGCCGAGAT +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKRCGPS*IAGSRD
Trigger: ATCTCGGCTCCCTGCAATCAAAGATGGTCCACACCG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATAAATCCTGTAAAAGATaGGTTCTGAGGAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDKSCKR*VLRSSR
Trigger: CCTTGAACTCCTCAGAACCAATCTTTTACAGGATTT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGACTGAGGATGCACGCCTaGGTCCTCGGCCCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRLRMHA*VLGPES
Trigger: ACTCTCAGGGCCGAGGACCAAGGCGTGCATCCTCAG...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCTGAGGATGCACGCCTaGGTCCTCGGCCCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLRMHA*VLGPES
Trigger: ACTCTCAGGGCCGAGGACCAAGGCGTGCATCCTCAG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATATCCAAAACTCTAACTaGCAGGTGTATTACAGAGCT +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDIQNSN*QVYYRA
Trigger: AGCTCTGTAATACACCTGCAAGTTAGAGTTTTGGAT...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAATGCTTCTTCTTGGTaGCCAGACAGAATAGAATAC +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDANASSW*PDRIEY
Trigger: GTATTCTATTCTGTCTGGCAACCAAGAAGAAGCATT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGTTTTCTGGAAGGCTTaGAGCACACTGGCATCCCGG +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKVFWKA*STLASR
Trigger: CCGGGATGCCAGTGTGCTCAAAGCCTTCCAGAAAAC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCTGACATACGATTTATaGCAAACACTTAACCAGCGT +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDALTYDL*QTLNQR
Trigger: ACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS GCA 90 bp GTGCGTGATCGTTTTCATCTTCAACAGTGCAGAGGATTGTTGTGGTaGTGGACAATGAAGGGAATCCCCCATCTCGTACTAGTACTCGAA +
Preference number: 5 (lower is better)
Translates to: VRDRFHLQQCRGLLW*WTMKGIPHLVLVLE
Trigger: TTCGAGTACTAGTACGAGATGGGGGATTCCCTTCATTGTCCAGCACCACAACAATCCTCTGCACTGTTGAAGATGAAAACGATCACGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS-3UTR CAA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTTGGTCATTCACGTCGTaGACGCGAATCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: SRVHHLASTMISSWPILFWSFTS*TRISTC
Trigger: GCAGGTGGAGATTCGCGTCAACGACGTGAATGACCA...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATCTCGGAGACGTCGAGTaGCAGGGAGTCGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: SWPILFHLFPMYILRFSHLGDVE*QGVEGK
Trigger: TTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGAG...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTTGCAGGGAGCCGAGATaGCAGGGAGCCGAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSCREPR*QGAESW
Trigger: CCAACTCTCGGCTCCCTGCAATCTCGGCTCCCTGCA...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTCGGTGTGGACCATCTTaGATTGCAGGGAGCCGAGAT +
Preference number: 5 (lower is better)
Translates to: SRVHHLASTMISSWPILFRCGPS*IAGSRD
Trigger: ATCTCGGCTCCCTGCAATCAAAGATGGTCCACACCG...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTTCCATGACTGTTATGTaGACCTCGGTGCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLSMTVM*TSVLLQ
Trigger: CTGCAGCAGCACCGAGGTCAACATAACAGTCATGGA...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCCATGACTGTTATGTaGACCTCGGTGCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSMTVM*TSVLLQ
Trigger: CTGCAGCAGCACCGAGGTCAACATAACAGTCATGGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTTGGGTGCGCCTGTGTTaGCAGCATTTGTGTCATCGG +
Preference number: 5 (lower is better)
Translates to: SRVHHLASTMISSWPILFWVRLC*QHLCHR
Trigger: CCGATGACACAAATGCTGCAAACACAGGCGCACCCA...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTTTTGCCTATTACCCCTaGGGGAACAGGGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLFAYYP*GNRALF
Trigger: GAAGAGAGCCCTGTTCCCCAAGGGGTAATAGGCAAA...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTGCCTATTACCCCTaGGGGAACAGGGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LSRVHHLASTMISSWPILFAYYP*GNRALF
Trigger: GAAGAGAGCCCTGTTCCCCAAGGGGTAATAGGCAAA...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTGTTCTTATTTCACCATaGTTGGCGTCAATCTTAAAG +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAVLISP*LASILK
Trigger: CTTTAAGATTGACGCCAACAATGGTGAAATAAGAAC...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTGGCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGAAATAAAAGTGGGGTaGTGGTCATTTACATCCAAA +
Preference number: 5 (lower is better)
Translates to: LALMLTTGRGLLNHHRQDEIKVG*WSFTSK
Trigger: TTTGGATGTAAATGACCACAACCCCACTTTTATTTC...ATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTAATCTAGAATCGCTTTaGTTGTTATCACACCACTCA +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDANLESL*LLSHHS
Trigger: TGAGTGGTGTGATAACAACAAAAGCGATTCTAGATT...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTTTTGGGGGATTGTCATaGACATCAAGTACTTGTATT +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAFGGLS*TSSTCI
Trigger: AATACAAGTACTTGATGTCAATGACAATCCCCCAAA...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GCCCTCATGCTGACCACAGGAAGAGGACTTCTGAACCACCATCGTCAGGATGCTCCAGTGGTTTCATATTaGAACTTCATCTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: ALMLTTGRGLLNHHRQDAPVVSY*NFIFCF
Trigger: AAAGCAGAAGATGAAGTTCAAATATGAAACCACTGG...AGCATCCTGACGATGGTGGTTCAGAAGTCCTCTTCCTGTGGTCAGCATGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp CAACTGCCTGTCCTTGAAGAGGAGGCACTCCCTGGTCAGTGGCAATaGCACTCATTCTGTAGGAAGGTCTATAATCATACGAAAGTATTG +
Preference number: 5 (lower is better)
Translates to: QLPVLEEEALPGQWQ*HSFCRKVYNHTKVL
Trigger: CAATACTTTCGTATGATTATAGACCTTCCTACAGAATGAGTGTCATTGCCACTGACCAGGGAGTGCCTCCTCTTCAAGGACAGGCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 90 bp ATGGTGAATGCACCAGAAGCCTCATCAGTCAGAAAATACTCAGTTTaGCCATTCAGGCCTTCATCCTTGTCCACAGCTGAAAGCACAAGA +
Preference number: 5 (lower is better)
Translates to: MVNAPEASSVRKYSV*PFRPSSLSTAESTR
Trigger: TCTTGTGCTTTCAGCTGTGGACAAGGATGAAGGCCTGAATGGGCAAACTGAGTATTTTCTGACTGATGAGGCTTCTGGTGCATTCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp AATTCCTGTGGTGGAGTCAATGGTAAAAAGGGACGACACGTTTCCTaGAATAAGCTCATAAGCCACTGTCCCATATATCCCAGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: NSCGGVNGKKGRHVS*NKLISHCPIYPRVL
Trigger: CAGGACTCTGGGATATATGGGACAGTGGCTTATGAGCTTATTCCAGGAAACGTGTCGTCCCTTTTTACCATTGACTCCACCACAGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTCGGAGACGTCGAGTaGCAGGGAGTCGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILGDVE*QGVEGK
Trigger: TTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCTCGGAGACGTCGAGTaGCAGGGAGTCGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSLGDVE*QGVEGK
Trigger: TTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGAG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGATCAAAGACCGGCGGGTaGTCGTTCTCATCCAGCACG +
Preference number: 5 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRSKTGG*SFSSST
Trigger: CGTGCTGGATGAGAACGACAACCCGCCGGTCTTTGA...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTGGCCTTGTAATGCTGTaGGCTGAAGAGAGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: SRVHHLASTMISSWPILFGLVML*AEERWL
Trigger: CAACCACCTCTCTTCAGCCAACAGCATTACAAGGCC...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGCAGGGAGCCGAGAGTaGGACTACAGTGTAGCGCAG +
Preference number: 5 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSAGSRE*DYSVAQ
Trigger: CTGCGCTACACTGTAGTCCAACTCTCGGCTCCCTGC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTGCAGGGAGCCGAGATaGCAGGGAGCCGAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSCREPR*QGAESW
Trigger: CCAACTCTCGGCTCCCTGCAATCTCGGCTCCCTGCA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTGAGCCCACCACCGTCTaGAGCAGAGACCATCAACGA +
Preference number: 5 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQREPTTV*SRDHQR
Trigger: TCGTTGATGGTCTCTGCTCAAGACGGTGGTGGGCTC...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATGTAGTGCTCACATTTaGCAAGAATCCGTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: LSRVHHLASTMISSWPILCSAHI*QESVLG
Trigger: CCCGAGGACGGATTCTTGCAAAATGTGAGCACTACA...TAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACAACAGTGCAGAGGATaGTTGTGGTGCTGGACAATG +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKQQCRG*LWCWTM
Trigger: CATTGTCCAGCACCACAACAATCCTCTGCACTGTTG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGGTAAAATTGCTGATTaGCTCCCGGTCCAAAGCACG +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKGKIAD*LPVQST
Trigger: CGTGCTTTGGACCGGGAGCAAATCAGCAATTTTACC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACCACTAAGGAGGCAGTaGCATCACCTTTGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKPLRRQ*HHLCLW
Trigger: CCAAAGACAAAGGTGATGCAACTGCCTCCTTAGTGG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp CTGATCACAATGAGCTCATCCTGGAAAGATGGGGAATGGTCATTCTaGTCTTCCACATCGATACTAAGGAAGACTGTGCTACTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: LITMSSSWKDGEWSF*SSTSILRKTVLLRE
Trigger: TTCCCTGAGTAGCACAGTCTTCCTTAGTATCGATGTGGAAGATCAGAATGACCATTCCCCATCTTTCCAGGATGAGCTCATTGTGATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 90 bp GACATCCAGCACACGGACTACAAGTGCTCCCTCTGTGTAGTGCACTaGATCAGAAATTTGGATGAGCAGCTCATATTCAGTCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: DIQHTDYKCSLCVVH*IRNLDEQLIFSHFF
Trigger: GAAGAAATGACTGAATATGAGCTGCTCATCCAAATTTCTGATTCAGTGCACTACACAGAGGGAGCACTTGTAGTCCGTGTGCTGGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 90 bp CCTAATAATTCTCCTTCTCTCAACAGTGGAGACAAGGCAGGAGGCTaGATCGTCAATAGGGAAAGAGATGGAGAAAAATTGGGAGTCATG +
Preference number: 5 (lower is better)
Translates to: PNNSPSLNSGDKAGG*IVNRERDGEKLGVM
Trigger: CATGACTCCCAATTTTTCTCCATCTCTTTCCCTATTGACGATGCAGCCTCCTGCCTTGTCTCCACTGTTGAGAGAAGGAGAATTATTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 90 bp CCATCGTTAAGGACGCATGATTGTATATTCTCCATCTACAGAGACTaGTGTGCAATGTCTTACTTTCTCCACTCTCCAAAGCCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: PSLRTHDCIFSIYRD*CAMSYFLHSPKPAE
Trigger: TTCCGCAGGCTTTGGAGAGTGGAGAAAGTAAGACATTGCACAGCAGTCTCTGTAGATGGAGAATATACAATCATGCGTCCTTAACGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624983.1
ENST00000640089.1
CDS CCA 90 bp AAAGTGTACTTAGGCCTTTCAAACTCAGCAGGTGCCAGAGTTGTCTaGAAAATGTGTATGGTGACATCGGCATTAATGACAGCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: KVYLGLSNSAGARVV*KMCMVTSALMTAVS
Trigger: GCTCACAGCTGTCATTAATGCCGATGTCACCATACACATTTTCCAGACAACTCTGGCACCTGCTGAGTTTGAAAGGCCTAAGTACACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCGGGTAACTGCCAGCTaGTGGCAGGATCGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCRVTAS*WQDRRK
Trigger: TTTTCTGCGATCCTGCCACAAGCTGGCAGTTACCCG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTACGGAAAGGGTGAGGTaGAACAACTGGGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRTERVR*NNWAEE
Trigger: CTCCTCTGCCCAGTTGTTCAACCTCACCCTTTCCGT...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTCAAAGACCGGCGGGTaGTCGTTCTCATCCAGCACG +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLSKTGG*SFSSST
Trigger: CGTGCTGGATGAGAACGACAACCCGCCGGTCTTTGA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTCAAAGACCGGCGGGTaGTCGTTCTCATCCAGCACG +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISKTGG*SFSSST
Trigger: CGTGCTGGATGAGAACGACAACCCGCCGGTCTTTGA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTAGAGGTGGTTGGTCATaGAGGTCAGCGACCCGGAGT +
Preference number: 5 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSRGGWS*RSATRS
Trigger: ACTCCGGGTCGCTGACCTCAATGACCAACCACCTCT...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAGAGGTGGTTGGTCATaGAGGTCAGCGACCCGGAGT +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIRGGWS*RSATRS
Trigger: ACTCCGGGTCGCTGACCTCAATGACCAACCACCTCT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGAGAGGTGGTTGGTCATaGAGGTCAGCGACCCGGAGT +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLRGGWS*RSATRS
Trigger: ACTCCGGGTCGCTGACCTCAATGACCAACCACCTCT...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGCAGGGAGCCGAGAGTaGGACTACAGTGTAGCGCAG +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSAGSRE*DYSVAQ
Trigger: CTGCGCTACACTGTAGTCCAACTCTCGGCTCCCTGC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGCAGGGAGCCGAGAGTaGGACTACAGTGTAGCGCAG +
Preference number: 5 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHAGSRE*DYSVAQ
Trigger: CTGCGCTACACTGTAGTCCAACTCTCGGCTCCCTGC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTGAGCCCACCACCGTCTaGAGCAGAGACCATCAACGA +
Preference number: 5 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSEPTTV*SRDHQR
Trigger: TCGTTGATGGTCTCTGCTCAAGACGGTGGTGGGCTC...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTGGGTGCGCCTGTGTTaGCAGCATTTGTGTCATCGG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCWVRLC*QHLCHR
Trigger: CCGATGACACAAATGCTGCAAACACAGGCGCACCCA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAACAACTGCCTGTCCTaGAAGAGGAGGCACTCCCTG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCNNCLS*KRRHSL
Trigger: CAGGGAGTGCCTCCTCTTCAAGGACAGGCAGTTGTT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATGTCAAGTATGGTGGTaGTCACTACCTCTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKCQVWW*SLPLQC
Trigger: ACACTGGAGAGGTAGTGACAACCACCATACTTGACA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAATGACAAGGGTAAAATaGCTGATTTGCTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKMTRVK*LICSRS
Trigger: GGACCGGGAGCAAATCAGCAATTTTACCCTTGTCAT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGTTTTCTGGAAGGCTTaGAGCACACTGGCATCCCGG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCVFWKA*STLASR
Trigger: CCGGGATGCCAGTGTGCTCAAAGCCTTCCAGAAAAC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp AGCTTCATCATTTACATCAAGAACAGTAACTGTCAAAGTCTGGGATaGAGAAAGTGCTGGTGTGCCATCATCCAGTGCCAGAACAGTCAG +
Preference number: 5 (lower is better)
Translates to: SFIIYIKNSNCQSLG*RKCWCAIIQCQNSQ
Trigger: CTGACTGTTCTGGCACTGGATGATGGCACACCAGCACTTTCTTCATCCCAGACTTTGACAGTTACTGTTCTTGATGTAAATGATGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 90 bp ATCTTGAGAAACACAGATTTGCCCATCATGAGGGTCGATCCGGAATaGCTGAGGTGCTTCATAGCTCAGGAATCCATCATAAAGAGAATA +
Preference number: 5 (lower is better)
Translates to: ILRNTDLPIMRVDPE*LRCFIAQESIIKRI
Trigger: TATTCTCTTTATGATGGATTCCTGAGCTATGAAGCACCTCAGGCATTCCGGATCGACCCTCATGATGGGCAAATCTGTGTTTCTCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCGGGTAACTGCCAGCTaGTGGCAGGATCGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSRVTAS*WQDRRK
Trigger: TTTTCTGCGATCCTGCCACAAGCTGGCAGTTACCCG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTACGGAAAGGGTGAGGTaGAACAACTGGGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHITERVR*NNWAEE
Trigger: CTCCTCTGCCCAGTTGTTCAACCTCACCCTTTCCGT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGACGGAAAGGGTGAGGTaGAACAACTGGGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLTERVR*NNWAEE
Trigger: CTCCTCTGCCCAGTTGTTCAACCTCACCCTTTCCGT...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTGGCCTTGTAATGCTGTaGGCTGAAGAGAGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRGLVML*AEERWL
Trigger: CAACCACCTCTCTTCAGCCAACAGCATTACAAGGCC...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGGCCTTGTAATGCTGTaGGCTGAAGAGAGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCGLVML*AEERWL
Trigger: CAACCACCTCTCTTCAGCCAACAGCATTACAAGGCC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCGGTGTGGACCATCTTaGATTGCAGGGAGCCGAGAT +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIRCGPS*IAGSRD
Trigger: ATCTCGGCTCCCTGCAATCAAAGATGGTCCACACCG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACAGAAGATGGGCTCATaGTCATTCACATCATCTACG +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKQKMGS*SFTSST
Trigger: CGTAGATGATGTGAATGACAATGAGCCCATCTTCTG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATTGAGAAACACAGATTaGCCCATCATGAGGGTCGAT +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLRNTD*PIMRVD
Trigger: ATCGACCCTCATGATGGGCAAATCTGTGTTTCTCAA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATTCAGTGGCAAGAACATaGATGATCTCGGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: SWPILFHLFPMYILRFSHSVART*MISVPG
Trigger: GCCAGGCACCGAGATCATCAATGTTCTTGCCACTGA...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAAAGGGCCTGTTATCATaGATGTCAGTAACTGAGACG +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKKGLLS*MSVTET
Trigger: CGTCTCAGTTACTGACATCAATGATAACAGGCCCTT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTGATCTAGATTTGCTGTaGCATCTCCAACGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLDLDLL*HLQRVA
Trigger: TGCTACACGTTGGAGATGCAACAGCAAATCTAGATC...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGAAGGACTGTGGTCATaGGCATCCAAAACTCTAACT +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKEGLWS*ASKTLT
Trigger: AGTTAGAGTTTTGGATGCCAATGACCACAGTCCTTC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAAAACCACAGTTCCATaGGGCCCCAAGTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCKTTVP*GPKSRS
Trigger: TGACCTGGACTTGGGGCCCAATGGAACTGTGGTTTT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCATGCTGTCCTGAATaGAGTCAGGAGCAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSCCPE*SQEQKL
Trigger: AAGCTTTTGCTCCTGACTCAATTCAGGACAGCATGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp GGTAGAGGAAATAGGCAGATTTTCTGGAACAATACAGCTGAAGCTTaGGAACATAAACTGAGGTGCATGGTCGTTATCATCCAGGACACT +
Preference number: 5 (lower is better)
Translates to: GRGNRQIFWNNTAEA*EHKLRCMVVIIQDT
Trigger: AGTGTCCTGGATGATAACGACCATGCACCTCAGTTTATGTTCTCAAGCTTCAGCTGTATTGTTCCAGAAAATCTGCCTATTTCCTCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp AACATTCTCCTCTACACTGATCACAATGAGCTCATCCTGGAAAGATaGGGAATGGTCATTCTGATCTTCCACATCGATACTAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: NILLYTDHNELILER*GMVILIFHIDTKED
Trigger: GTCTTCCTTAGTATCGATGTGGAAGATCAGAATGACCATTCCCCATCTTTCCAGGATGAGCTCATTGTGATCAGTGTAGAGGAGAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp GTTGTTATCACACCACTCAGTGCATCAATCTGGAATGCTTCTTCTTaGTTGCCAGACAGAATAGAATACTCAATCAGGCCGTTCAAACCA +
Preference number: 5 (lower is better)
Translates to: VVITPLSASIWNASS*LPDRIEYSIRPFKP
Trigger: TGGTTTGAACGGCCTGATTGAGTATTCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCAGATTGATGCACTGAGTGGTGTGATAACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS-3UTR CAA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCATGGTCATTCACGTCGTaGACGCGAATCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: TCSIICSSILMFSLNWEAWSFTS*TRISTC
Trigger: GCAGGTGGAGATTCGCGTCAACGACGTGAATGACCA...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATGAAAGAGCACGTGAATaGCTGGCCGGTTGTCATTCA +
Preference number: 5 (lower is better)
Translates to: SWPILFHLFPMYILRFSHERARE*LAGCHS
Trigger: TGAATGACAACCGGCCAGCAATTCACGTGCTCTTTC...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATGCTGAAGAGAGGTGGTaGGTCATTGAGGTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHAEERW*VIEVSD
Trigger: GTCGCTGACCTCAATGACCAACCACCTCTCTTCAGC...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTCAGTGGCAAGAACATaGATGATCTCGGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLSVART*MISVPG
Trigger: GCCAGGCACCGAGATCATCAATGTTCTTGCCACTGA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCAGCAGGTGCCAGAGTaGTCTGGAAAATGTGTATGG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCQQVPE*SGKCVW
Trigger: CCATACACATTTTCCAGACAACTCTGGCACCTGCTG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAACTCACTGACTTCCACTaGATAGACCAAATGTTCGAA +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKLTDFH*IDQMFE
Trigger: TTCGAACATTTGGTCTATCAAGTGGAAGTCAGTGAG...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp ATAAACTGGAACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATTGGGTGCGCCTGTGTTaGCAGCATTTGTGTCATCGG +
Preference number: 5 (lower is better)
Translates to: INWNLYPDIFHDLDLLLHWVRLC*QHLCHR
Trigger: CCGATGACACAAATGCTGCAAACACAGGCGCACCCA...ATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTTCCAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATTGTAGTGCTCACATTTaGCAAGAATCCGTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: SWPILFHLFPMYILRFSHCSAHI*QESVLG
Trigger: CCCGAGGACGGATTCTTGCAAAATGTGAGCACTACA...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTTTGCCTATTACCCCTaGGGGAACAGGGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIFAYYP*GNRALF
Trigger: GAAGAGAGCCCTGTTCCCCAAGGGGTAATAGGCAAA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTAAGGGCCTGTTATCATaGATGTCAGTAACTGAGACG +
Preference number: 5 (lower is better)
Translates to: SRVHHLASTMISSWPILFKGLLS*MSVTET
Trigger: CGTCTCAGTTACTGACATCAATGATAACAGGCCCTT...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp ACTTTCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTTTCCATGATCTAGATTaGCTGTTGCATCTCCAACGT +
Preference number: 5 (lower is better)
Translates to: TFTSPSPSFNNDQLMANLFHDLD*LLHLQR
Trigger: ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAA...AAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCAGTGCAGAGGATTGTaGTGGTGCTGGACAATGAAG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCQCRGL*WCWTMK
Trigger: CTTCATTGTCCAGCACCACAACAATCCTCTGCACTG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTTCAGGCCTTCATCCTaGTCCACAGCTGAAAGCACA +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCFRPSS*STAEST
Trigger: TGTGCTTTCAGCTGTGGACAAGGATGAAGGCCTGAA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTCACGGTCGAGGGTGTaGCTGGTTTTCAATGTGCCT +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISRSRV*LVFNVP
Trigger: AGGCACATTGAAAACCAGCAACACCCTCGACCGTGA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGCATCACCTTTGTCTTaGGCTTGGACTGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIASPLS*AWTVRQ
Trigger: CTGCCTCACAGTCCAAGCCAAAGACAAAGGTGATGC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGCAGTTGCATCACCTTaGTCTTTGGCTTGGACTGTG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCAVASP*SLAWTV
Trigger: CACAGTCCAAGCCAAAGACAAAGGTGATGCAACTGC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAGTGCAAGATGCAAACTaGGAATCTGATTTGGGACTA +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKVQDAN*ESDLGL
Trigger: TAGTCCCAAATCAGATTCCAAGTTTGCATCTTGCAC...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTATGGTGAGCAGGTACTaGGCATCCCAGTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCMVSRY*ASQWFH
Trigger: ATGAAACCACTGGGATGCCAAGTACCTGCTCACCAT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp GCTCTCAGGTCAGGATTTCCACCATCACTGGCTTCCACAAGAAATTaGGTTGTTGATATTGTATCCAGAAGTAATACGGGACTGATAGTA +
Preference number: 5 (lower is better)
Translates to: ALRSGFPPSLASTRN*VVDIVSRSNTGLIV
Trigger: TACTATCAGTCCCGTATTACTTCTGGATACAATATCAACAACTCAATTTCTTGTGGAAGCCAGTGATGGTGGAAATCCTGACCTGAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 90 bp TCTCCTTCTCCTAATTCACAGAACAGAGACTTGAGAACAAAGGCTTaGAGTTCATCAGAACTGAATGCAAAGTCTGTCCCACTAAAGGCA +
Preference number: 5 (lower is better)
Translates to: SPSPNSQNRDLRTKA*SSSELNAKSVPLKA
Trigger: TGCCTTTAGTGGGACAGACTTTGCATTCAGTTCTGATGAACTTCAAGCCTTTGTTCTCAAGTCTCTGTTCTGTGAATTAGGAGAAGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS GCA 90 bp AATCGCTTTTGTTGTTATCACACCACTCAGTGCATCAATCTGGAATaGTTCTTCTTGGTTGCCAGACAGAATAGAATACTCAATCAGGCC +
Preference number: 5 (lower is better)
Translates to: NRFCCYHTTQCINLE*FFLVARQNRILNQA
Trigger: GGCCTGATTGAGTATTCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCAGATTGATGCACTGAGTGGTGTGATAACAACAAAAGCGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 90 bp CTGATGATGGAATATTCAACATATGTGTTTTCACGGGTCCAGTCATaGTCGATGTTTGAAAATGTAACAAGCGTGCTTCCAACCAGAGCA +
Preference number: 5 (lower is better)
Translates to: LMMEYSTYVFSRVQS*SMFENVTSVLPTRA
Trigger: TGCTCTGGTTGGAAGCACGCTTGTTACATTTTCAAACATCGACCATGACTGGACCCGTGAAAACACATATGTTGAATATTCCATCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGGAAAGAGCACGTGAATaGCTGGCCGGTTGTCATTCA +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLERARE*LAGCHS
Trigger: TGAATGACAACCGGCCAGCAATTCACGTGCTCTTTC...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGGCCTTGTAATGCTGTaGGCTGAAGAGAGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSGLVML*AEERWL
Trigger: CAACCACCTCTCTTCAGCCAACAGCATTACAAGGCC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCAGTGGCAAGAACATaGATGATCTCGGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSVART*MISVPG
Trigger: GCCAGGCACCGAGATCATCAATGTTCTTGCCACTGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCAGCAGGTGCCAGAGTaGTCTGGAAAATGTGTATGG +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLQQVPE*SGKCVW
Trigger: CCATACACATTTTCCAGACAACTCTGGCACCTGCTG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCAGCAGGTGCCAGAGTaGTCTGGAAAATGTGTATGG +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIQQVPE*SGKCVW
Trigger: CCATACACATTTTCCAGACAACTCTGGCACCTGCTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATAGTTCAAGGGCTCTCTaGCTTTCACTGTTCCAATGG +
Preference number: 5 (lower is better)
Translates to: SWPILFHLFPMYILRFSHSSRAL*LSLFQW
Trigger: CCATTGGAACAGTGAAAGCAAGAGAGCCCTTGAACT...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAGTTCAAGGGCTCTCTaGCTTTCACTGTTCCAATGG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSSRAL*LSLFQW
Trigger: CCATTGGAACAGTGAAAGCAAGAGAGCCCTTGAACT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTAGTTCAAGGGCTCTCTaGCTTTCACTGTTCCAATGG +
Preference number: 5 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRSSRAL*LSLFQW
Trigger: CCATTGGAACAGTGAAAGCAAGAGAGCCCTTGAACT...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTCTCACTGACTTCCACTaGATAGACCAAATGTTCGAA +
Preference number: 5 (lower is better)
Translates to: SRVHHLASTMISSWPILFLTDFH*IDQMFE
Trigger: TTCGAACATTTGGTCTATCAAGTGGAAGTCAGTGAG...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTGTAGTGCTCACATTTaGCAAGAATCCGTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHICSAHI*QESVLG
Trigger: CCCGAGGACGGATTCTTGCAAAATGTGAGCACTACA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAAGAAGGTGGGGGAATaGTCATTCTCATCCCAGACA +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCKKVGE*SFSSQT
Trigger: TGTCTGGGATGAGAATGACAATTCCCCCACCTTCTT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGAAAGAAGGTGGGGGAATaGTCATTCTCATCCCAGACA +
Preference number: 5 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRKKVGE*SFSSQT
Trigger: TGTCTGGGATGAGAATGACAATTCCCCCACCTTCTT...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTTCAATAGCTGTAATTTaGCCTATTACCCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SRVHHLASTMISSWPILFSIAVI*PITPWG
Trigger: TCCCCAAGGGGTAATAGGCAAAATTACAGCTATTGA...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTTCCAGTGCCACCCAATaGATTAACTCTCCTGTATTA +
Preference number: 5 (lower is better)
Translates to: SRVHHLASTMISSWPILFSSATQ*INSPVL
Trigger: TAATACAGGAGAGTTAATCAATTGGGTGGCACTGGA...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCAACAGTGCAGAGGATaGTTGTGGTGCTGGACAATG +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIQQCRG*LWCWTM
Trigger: CATTGTCCAGCACCACAACAATCCTCTGCACTGTTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAAATCCAAAACTCTAACTaGCAGGTGTATTACAGAGCT +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKIQNSN*QVYYRA
Trigger: AGCTCTGTAATACACCTGCAAGTTAGAGTTTTGGAT...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCCCTTTATCTGTGGCTaGGACAATCAAGCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCPFICG*DNQAVG
Trigger: TCCTACAGCTTGATTGTCCAAGCCACAGATAAAGGG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCAGTCACCTGTACCTaGATTACAGTCGTATTAGAA +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSVTCT*ITVVLE
Trigger: TTCTAATACGACTGTAATCAAGGTACAGGTGACTGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCAGAGGTCGTCTGAGTaGAAAGAGCTGCACACCTTA +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIQRSSE*KELHTL
Trigger: TAAGGTGTGCAGCTCTTTCAACTCAGACGACCTCTG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTATGGTGAGCAGGTACTaGGCATCCCAGTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIMVSRY*ASQWFH
Trigger: ATGAAACCACTGGGATGCCAAGTACCTGCTCACCAT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS CCA 90 bp AGGATAGAATTCTGTAAGAAATGTTCTCATTGCTTTCTAAGTCTGTaGCTGACAGAGTCAGCACTGAATACCCCACAGGTATTGATTCAG +
Preference number: 5 (lower is better)
Translates to: RIEFCKKCSHCFLSL*LTESALNTPQVLIQ
Trigger: CTGAATCAATACCTGTGGGGTATTCAGTGCTGACTCTGTCAGCCACAGACTTAGAAAGCAATGAGAACATTTCTTACAGAATTCTATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS-3UTR CAA 90 bp CTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAGATCTAGAGAACTGACCAGACTTTACATCTGTTCCTaGTTCTACTCGGCTGGTTGT +
Preference number: 5 (lower is better)
Translates to: LYSYVFLKLGGRSRELTRLYICS*FYSAGC
Trigger: ACAACCAGCCGAGTAGAACAAGGAACAGATGTAAAG...TCTGGTCAGTTCTCTAGATCTGCCTCCCAATTTAAGGAAAACATAAGAATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGAAAGAGCACGTGAATaGCTGGCCGGTTGTCATTCA +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSERARE*LAGCHS
Trigger: TGAATGACAACCGGCCAGCAATTCACGTGCTCTTTC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTTCCCTGTCGATATCTaGAGAAACACAGATTTGCCC +
Preference number: 5 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRFPVDI*RNTDLP
Trigger: GGGCAAATCTGTGTTTCTCAAGATATCGACAGGGAA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCACAGCAGGTGCCAGAGTaGTCTGGAAAATGTGTATGG +
Preference number: 5 (lower is better)
Translates to: TCSIICSSILMFSLNWEAQQVPE*SGKCVW
Trigger: CCATACACATTTTCCAGACAACTCTGGCACCTGCTG...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TCACGAGTCCATCACCTAGCTTCAACAATGATCAGCTCATGGCCAATCTTATTTAAATCCTGTAAAAGATaGGTTCTGAGGAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: SRVHHLASTMISSWPILFKSCKR*VLRSSR
Trigger: CCTTGAACTCCTCAGAACCAATCTTTTACAGGATTT...AAATAAGATTGGCCATGAGCTGATCATTGTTGAAGCTAGGTGATGGACTCGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTGTAGTGCTCACATTTaGCAAGAATCCGTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSCSAHI*QESVLG
Trigger: CCCGAGGACGGATTCTTGCAAAATGTGAGCACTACA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TCATGGCCAATCTTATTTCATCTATTCCCCATGTATATACTTCGCTTCTCCCATAAGGGCCTGTTATCATaGATGTCAGTAACTGAGACG +
Preference number: 5 (lower is better)
Translates to: SWPILFHLFPMYILRFSHKGLLS*MSVTET
Trigger: CGTCTCAGTTACTGACATCAATGATAACAGGCCCTT...ATGGGAGAAGCGAAGTATATACATGGGGAATAGATGAAATAAGATTGGCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAATCCAAAGGACAGGTaGTGGTTAGTAAGCCTGATG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCNPKDR*WLVSLM
Trigger: CATCAGGCTTACTAACCACAACCTGTCCTTTGGATT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATCAAAATCAAGAAACTaGGGTTCTTTCACAGTGAGT +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKSKSRN*GSFTVS
Trigger: ACTCACTGTGAAAGAACCCAAGTTTCTTGATTTTGA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTCTGGAATGCTTCTTCTaGGTTGCCAGACAGAATAGA +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCLECFF*VARQNR
Trigger: TCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCAG...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCCCTTTATCTGTGGCTaGGACAATCAAGCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIPFICG*DNQAVG
Trigger: TCCTACAGCTTGATTGTCCAAGCCACAGATAAAGGG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTACTGGTGGATTATCATaGACATCCAGCACACGGACT +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHITGGLS*TSSTRT
Trigger: AGTCCGTGTGCTGGATGTCAATGATAATCCACCAGT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTACCTTTGTCTTTGGCTaGGACTGTGAGGCAGTATTT +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCTFVFG*DCEAVF
Trigger: AAATACTGCCTCACAGTCCAAGCCAAAGACAAAGGT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp CCCACTTGTAGTACTTGTTTGGTGGCATTGTGGCACTGGATACAGACTGATAAATATAGCTTTATACATTaGTTCCCAATCTCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: PTCSTCLVALWHWIQTDKYSFIH*FPISVS
Trigger: GCTGACTGAGATTGGGAACAAATGTATAAAGCTATA...TTTATCAGTCTGTATCCAGTGCCACAATGCCACCAAACAAGTACTACAAGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp TCTTCAAAATCCAATGTTTTCACCAACACCACCACTCCAGTGTTCTaGTCAATAGCAAACTTGGTTCCAGGATTACTCTCTTTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: SSKSNVFTNTTTPVF*SIANLVPGLLSLAK
Trigger: TTTTGCCAAAGAGAGTAATCCTGGAACCAAGTTTGCTATTGATCAGAACACTGGAGTGGTGGTGTTGGTGAAAACATTGGATTTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 90 bp AAAACATCTCTAAACTGTTCATTACTTCCTTGTCTGCTGAAAAGTTaGCAGCACTCAGAATTTCTACCTCTGGACTATAGAGTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: KTSLNCSLLPCLLKS*QHSEFLPLDYRVLW
Trigger: CCACAGGACTCTATAGTCCAGAGGTAGAAATTCTGAGTGCTGTCAACTTTTCAGCAGACAAGGAAGTAATGAACAGTTTAGAGATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTTTACATCTGTTCCTaGTTCTACTCGGCTGGTTGT +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILYICS*FYSAGC
Trigger: ACAACCAGCCGAGTAGAACAAGGAACAGATGTAAAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCAGAAGATGGGCTCATaGTCATTCACATCATCTACG +
Preference number: 5 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSQKMGS*SFTSST
Trigger: CGTAGATGATGTGAATGACAATGAGCCCATCTTCTG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCAGAAGATGGGCTCATaGTCATTCACATCATCTACG +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLQKMGS*SFTSST
Trigger: CGTAGATGATGTGAATGACAATGAGCCCATCTTCTG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTTGAGAAACACAGATTaGCCCATCATGAGGGTCGAT +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLLRNTD*PIMRVD
Trigger: ATCGACCCTCATGATGGGCAAATCTGTGTTTCTCAA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTTTGAGAAACACAGATTaGCCCATCATGAGGGTCGAT +
Preference number: 5 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSLRNTD*PIMRVD
Trigger: ATCGACCCTCATGATGGGCAAATCTGTGTTTCTCAA...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTTCCCTGTCGATATCTaGAGAAACACAGATTTGCCC +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLFPVDI*RNTDLP
Trigger: GGGCAAATCTGTGTTTCTCAAGATATCGACAGGGAA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTTCCCTGTCGATATCTaGAGAAACACAGATTTGCCC +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIFPVDI*RNTDLP
Trigger: GGGCAAATCTGTGTTTCTCAAGATATCGACAGGGAA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAAAGAAGGTGGGGGAATaGTCATTCTCATCCCAGACA +
Preference number: 5 (lower is better)
Translates to: TCSIICSSILMFSLNWEAKKVGE*SFSSQT
Trigger: TGTCTGGGATGAGAATGACAATTCCCCCACCTTCTT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAAGAAGGTGGGGGAATaGTCATTCTCATCCCAGACA +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSKKVGE*SFSSQT
Trigger: TGTCTGGGATGAGAATGACAATTCCCCCACCTTCTT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTTCCAGTGCCACCCAATaGATTAACTCTCCTGTATTA +
Preference number: 5 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRSSATQ*INSPVL
Trigger: TAATACAGGAGAGTTAATCAATTGGGTGGCACTGGA...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGAAACAAGTCTCCGGTaGAGCTGTCTATTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCETSLR*SCLFQS
Trigger: ACTTTGAAATAGACAGCTCAACCGGAGACTTGTTTC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTCATCATCTTTGGCATaGAAGACATACACCAGGGTT +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSSSLA*KTYTRV
Trigger: AACCCTGGTGTATGTCTTCAATGCCAAAGATGATGA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAATCCAAAGGACAGGTaGTGGTTAGTAAGCCTGATG +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHINPKDR*WLVSLM
Trigger: CATCAGGCTTACTAACCACAACCTGTCCTTTGGATT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGAAGGACTGTGGTCATaGGCATCCAAAACTCTAACT +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIEGLWS*ASKTLT
Trigger: AGTTAGAGTTTTGGATGCCAATGACCACAGTCCTTC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAGAGATGGAGAAAAATaGGGAGTCATGCCTTCTGGC +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSRDGEK*GVMPSG
Trigger: GCCAGAAGGCATGACTCCCAATTTTTCTCCATCTCT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS TCA 90 bp TGTCGTCTCATAATCAAGTTCCTTAGAAAGAAACAAGTCTCCGGTTaGGCTGTCTATTTCAAAGTGTCCATCCTTATCATCTGCAACAAT +
Preference number: 5 (lower is better)
Translates to: CRLIIKFLRKKQVSG*AVYFKVSILIICNN
Trigger: ATTGTTGCAGATGATAAGGATGGACACTTTGAAATAGACAGCTCAACCGGAGACTTGTTTCTTTCTAAGGAACTTGATTATGAGACGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 90 bp CTACAAGTGCTCCCTCTGTGTAGTGCACTGAATCAGAAATTTGGATaGGCAGCTCATATTCAGTCATTTCTTCAAAATCCAATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LQVLPLCSALNQKFG*AAHIQSFLQNPMFS
Trigger: TGAAAACATTGGATTTTGAAGAAATGACTGAATATGAGCTGCTCATCCAAATTTCTGATTCAGTGCACTACACAGAGGGAGCACTTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 90 bp GAAGAGATCATGATCATAAGACATTCCATGAGTGAGAAAACAGGGTaGTACAATAGAATAGGTCAATTCTCCATACGGACCAGCATCAAA +
Preference number: 5 (lower is better)
Translates to: EEIMIIRHSMSEKTG*YNRIGQFSIRTSIK
Trigger: TTTGATGCTGGTCCGTATGGAGAATTGACCTATTCTATTGTATCACCCTGTTTTCTCACTCATGGAATGTCTTATGATCATGATCTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 90 bp AATTCATTTCTAGGAATTTATCCTGCAGAGGTTCCTCTACAGGTGTaGAAAAGTCACACACGGCTATTTGCTCAAGTACTATTTGGACTA +
Preference number: 5 (lower is better)
Translates to: NSFLGIYPAEVPLQV*KSHTRLFAQVLFGL
Trigger: TAGTCCAAATAGTACTTGAGCAAATAGCCGTGTGTGACTTTTTCACACCTGTAGAGGAACCTCTGCAGGATAAATTCCTAGAAATGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624983.1
ENST00000640089.1
CDS GCA 90 bp CATCAGTATTTCCATCAATTATGTGATATTCAACAGCTCTGTTATTaGCAGCATCCATATCAGAGGCTAAAACCGTATAGACAACCTCTG +
Preference number: 5 (lower is better)
Translates to: HQYFHQLCDIQQLCY*QHPYQRLKPYRQPL
Trigger: CAGAGGTTGTCTATACGGTTTTAGCCTCTGATATGGATGCTGGCAATAACAGAGCTGTTGAATATCACATAATTGATGGAAATACTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS-3UTR CAA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCACTTTACATCTGTTCCTaGTTCTACTCGGCTGGTTGT +
Preference number: 5 (lower is better)
Translates to: TCSIICSSILMFSLNWEALYICS*FYSAGC
Trigger: ACAACCAGCCGAGTAGAACAAGGAACAGATGTAAAG...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp ACGTGTAGCATAATATGTTCCTCTATTCTTATGTTTTCCTTAAATTGGGAGGCAAAGAAAAGACTTTGTTaGGCAAACAAACCGACGGCC +
Preference number: 5 (lower is better)
Translates to: TCSIICSSILMFSLNWEAKKRLC*ANKPTA
Trigger: GGCCGTCGGTTTGTTTGCCAAACAAAGTCTTTTCTT...TGCCTCCCAATTTAAGGAAAACATAAGAATAGAGGAACATATTATGCTACACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCAGAAGATGGGCTCATaGTCATTCACATCATCTACG +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSQKMGS*SFTSST
Trigger: CGTAGATGATGTGAATGACAATGAGCCCATCTTCTG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTTGAGAAACACAGATTaGCCCATCATGAGGGTCGAT +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLRNTD*PIMRVD
Trigger: ATCGACCCTCATGATGGGCAAATCTGTGTTTCTCAA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTTCCCTGTCGATATCTaGAGAAACACAGATTTGCCC +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSFPVDI*RNTDLP
Trigger: GGGCAAATCTGTGTTTCTCAAGATATCGACAGGGAA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAAATCCTGTAAAAGATaGGTTCTGAGGAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCKSCKR*VLRSSR
Trigger: CCTTGAACTCCTCAGAACCAATCTTTTACAGGATTT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGCTCACTGACTTCCACTaGATAGACCAAATGTTCGAA +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLLTDFH*IDQMFE
Trigger: TTCGAACATTTGGTCTATCAAGTGGAAGTCAGTGAG...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTAATCTATGGATTCCTGCCACCCATCTCTCTATTTGTCCTTGCAATTTATTTGTCAATAGCTGTAATTTaGCCTATTACCCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: LIYGFLPPISLFVLAIYLSIAVI*PITPWG
Trigger: TCCCCAAGGGGTAATAGGCAAAATTACAGCTATTGA...CAAATAAATTGCAAGGACAAATAGAGAGATGGGTGGCAGGAATCCATAGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTCAGGGAAAGGTTTTaGCTATGGTCTGTAGTAATC +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILRERF*LWSVVI
Trigger: GATTACTACAGACCATAGCAAAAACCTTTCCCTGAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCAGAAAATACTCAGTTaGCCCATTCAGGCCTTCATC +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSQKILS*PIQAFI
Trigger: GATGAAGGCCTGAATGGGCAAACTGAGTATTTTCTG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCATGCTGTCCTGAATaGAGTCAGGAGCAAAAGCTT +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSCCPE*SQEQKL
Trigger: AAGCTTTTGCTCCTGACTCAATTCAGGACAGCATGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCTGGAATGCTTCTTCTaGGTTGCCAGACAGAATAGA +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLECFF*VARQNR
Trigger: TCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCAG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTCTAGAATCGCTTTTGTaGTTATCACACCACTCAGTG +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHILESLL*LSHHSV
Trigger: CACTGAGTGGTGTGATAACAACAAAAGCGATTCTAG...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTCAGTCACCTGTACCTaGATTACAGTCGTATTAGAA +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCSVTCT*ITVVLE
Trigger: TTCTAATACGACTGTAATCAAGGTACAGGTGACTGA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTGACCTGATAGAAATCTaGAGAAAACACTGGTGGATT +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCDLIEI*RKHWWI
Trigger: AATCCACCAGTGTTTTCTCAAGATTTCTATCAGGTC...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTTTCATAGTCAAGGATTaGCTTAGCATGAATATCCCC +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCFIVKD*LSMNIP
Trigger: GGGGATATTCATGCTAAGCAAATCCTTGACTATGAA...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTACCTTTGTCTTTGGCTaGGACTGTGAGGCAGTATTT +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSTFVFG*DCEAVF
Trigger: AAATACTGCCTCACAGTCCAAGCCAAAGACAAAGGT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGCCCAGGAATCTGTTTaGGAAGCCAATTCAATGATT +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIAQESV*EANSMI
Trigger: AATCATTGAATTGGCTTCCAAAACAGATTCCTGGGC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCTCACTGACTTCCACTaGATAGACCAAATGTTCGAA +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLTDFH*IDQMFE
Trigger: TTCGAACATTTGGTCTATCAAGTGGAAGTCAGTGAG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AACTTGTATCCTGACATTTTCCATGATCTAGATTTGCTGTTGCATCTCCAACGTCACCCATCTCTCTATTaGTCCTTGCAATTTATTTGT +
Preference number: 5 (lower is better)
Translates to: NLYPDIFHDLDLLLHLQRHPSLY*SLQFIC
Trigger: ACAAATAAATTGCAAGGACAAATAGAGAGATGGGTG...ACGTTGGAGATGCAACAGCAAATCTAGATCATGGAAAATGTCAGGATACAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCATCATCTTTGGCATaGAAGACATACACCAGGGTT +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSSSLA*KTYTRV
Trigger: AACCCTGGTGTATGTCTTCAATGCCAAAGATGATGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCTAGAATCGCTTTTGTaGTTATCACACCACTCAGTG +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSLESLL*LSHHSV
Trigger: CACTGAGTGGTGTGATAACAACAAAAGCGATTCTAG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTATTGCAAACACTTAACCAGCGTGTTCACATTTTTAACCCCATTCCCACTTGTAATCTAGAATCGCTTTaGTTGTTATCACACCACTCA +
Preference number: 5 (lower is better)
Translates to: LLQTLNQRVHIFNPIPTCNLESL*LLSHHS
Trigger: TGAGTGGTGTGATAACAACAAAAGCGATTCTAGATT...ACAAGTGGGAATGGGGTTAAAAATGTGAACACGCTGGTTAAGTGTTTGCAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGTGCAAGATGCAAACTaGGAATCTGATTTGGGACTA +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSVQDAN*ESDLGL
Trigger: TAGTCCCAAATCAGATTCCAAGTTTGCATCTTGCAC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTAAGATTTCTTCTCTTTaGGAATGCCAGGCATATGCA +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIKISSL*ECQAYA
Trigger: TGCATATGCCTGGCATTCCAAAAGAGAAGAAATCTT...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTCTCGAGTTGCTGGCTaGAAAACATTTTGTTCATTC +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISRVAG*KTFCSF
Trigger: GAATGAACAAAATGTTTTCAAGCCAGCAACTCGAGA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp AGTCCATATATTGCATATTTCTTTAATCTATGGATTCCTGCCACCCATCTCTCTCACCCATCTCTCTATTaGTCCTTGCAATTTATTTGT +
Preference number: 5 (lower is better)
Translates to: SPYIAYFFNLWIPATHLSHPSLY*SLQFIC
Trigger: ACAAATAAATTGCAAGGACAAATAGAGAGATGGGTG...AGAGAGATGGGTGGCAGGAATCCATAGATTAAAGAAATATGCAATATATGGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339452.2
ENST00000639512.1
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGTTCTTATTTCACCATaGTTGGCGTCAATCTTAAAG +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIVLISP*LASILK
Trigger: CTTTAAGATTGACGCCAACAATGGTGAAATAAGAAC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTGAAATAAAAGTGGGGTaGTGGTCATTTACATCCAAA +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIEIKVG*WSFTSK
Trigger: TTTGGATGTAAATGACCACAACCCCACTTTTATTTC...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTCCAAAACTGGATCATaGTCATTAACATCAGTGACA +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHISKTGS*SLTSVT
Trigger: TGTCACTGATGTTAATGACAATGATCCAGTTTTGGA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTGACCTGATAGAAATCTaGAGAAAACACTGGTGGATT +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSDLIEI*RKHWWI
Trigger: AATCCACCAGTGTTTTCTCAAGATTTCTATCAGGTC...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp TTGAAAGAGCTGACATACGATTTATTGCAAACACTTAACCAGCGTGTTCACATTTTTGGGGGATTGTCATaGACATCAAGTACTTGTATT +
Preference number: 5 (lower is better)
Translates to: LKELTYDLLQTLNQRVHIFGGLS*TSSTCI
Trigger: AATACAAGTACTTGATGTCAATGACAATCCCCCAAA...AATGTGAACACGCTGGTTAAGTGTTTGCAATAAATCGTATGTCAGCTCTTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTTCATAGTCAAGGATTaGCTTAGCATGAATATCCCC +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSFIVKD*LSMNIP
Trigger: GGGGATATTCATGCTAAGCAAATCCTTGACTATGAA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTAAGATTTCTTCTCTTTaGGAATGCCAGGCATATGCA +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSKISSL*ECQAYA
Trigger: TGCATATGCCTGGCATTCCAAAAGAGAAGAAATCTT...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCTCGAGTTGCTGGCTaGAAAACATTTTGTTCATTC +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSRVAG*KTFCSF
Trigger: GAATGAACAAAATGTTTTCAAGCCAGCAACTCGAGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCCAAAACTGGATCATaGTCATTAACATCAGTGACA +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSKTGS*SLTSVT
Trigger: TGTCACTGATGTTAATGACAATGATCCAGTTTTGGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTTCAAAATCAAGAAACTaGGGTTCTTTCACAGTGAGT +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSSKSRN*GSFTVS
Trigger: ACTCACTGTGAAAGAACCCAAGTTTCTTGATTTTGA...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS-3UTR CAA 90 bp GTTAAATTAAAGCTGCAAGTGTGTGAGCAAATGGTAAAAAGACTTCTGACTTCTCCAGTGGTTTCATATTaGAACTTCATCTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: VKLKLQVCEQMVKRLLTSPVVSY*NFIFCF
Trigger: AAAGCAGAAGATGAAGTTCAAATATGAAACCACTGG...AGAAGTCAGAAGTCTTTTTACCATTTGCTCACACACTTGCAGCTTTAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357232.10
ENST00000639062.3
CDS GCA 72 bp CAGGAGGCCGGTGCGCCGGGGTCGGCCGCCGTCCCATaGCTCGATCTGCAGCCGGTGCGCCGCCGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: QEAGAPGSAAVP*LDLQPVRRRLL
Trigger: GAGGAGGCGGCGGCGCACCGGCTGCAGATCGAGGCATGGGACGGCGGCCGACCCCGGCGCACCGGCCTCCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 72 bp TCGGTGGCGCGCACGCGACAGACCTCGGCGCCCGGCTaGGCGTCCTCGCGCACCGCGGCGCGGTACTCGTCC +
Preference number: 6 (lower is better)
Translates to: SVARTRQTSAPG*ASSRTAARYSS
Trigger: GGACGAGTACCGCGCCGCGGTGCGCGAGGACGCCCAGCCGGGCGCCGAGGTCTGTCGCGTGCGCGCCACCGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 72 bp GGGCAACTGGCAGGCGGAAGGCGGTCCCTGGCGGGCTaGGCTCGGAGACGTCGAGTTGCAGGGAGTCGAGGG +
Preference number: 6 (lower is better)
Translates to: GQLAGGRRSLAG*ARRRRVAGSRG
Trigger: CCCTCGACTCCCTGCAACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGCCTGCCAGTTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 72 bp TGCAGGCTGGGGCGCTGCCGAGCTGCGCCTGCACCGTaGGCACAACCACGGGCTGCGTCTCGTGATCCAGGG +
Preference number: 6 (lower is better)
Translates to: CRLGRCRAAPAP*AQPRAASRDPG
Trigger: CCCTGGATCACGAGACGCAGCCCGTGGTTGTGCTCACGGTGCAGGCGCAGCTCGGCAGCGCCCCAGCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000504580.1
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638365.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS GCA 72 bp TCCTCCGACAGAAAGAAGCCGCTCCCCTCCTGCTGCTaGGCGGCCGGCAGCCCGGCGCGGATGTCACCTACC +
Preference number: 6 (lower is better)
Translates to: SSDRKKPLPSCC*AAGSPARMSPT
Trigger: GGTAGGTGACATCCGCGCCGGGCTGCCGGCCGCGCAGCAGCAGGAGGGGAGCGGCTTCTTTCTGTCGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 72 bp GAGTCCTCCGACAGAAAGAAGCCGCTCCCCTCCTGCTaGTGCGCGGCCGGCAGCCCGGCGCGGATGTCACCT +
Preference number: 6 (lower is better)
Translates to: ESSDRKKPLPSC*CAAGSPARMSP
Trigger: AGGTGACATCCGCGCCGGGCTGCCGGCCGCGCAGCAGCAGGAGGGGAGCGGCTTCTTTCTGTCGGAGGACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 72 bp CGCTGCGTCCTGGCGCCGCTGCTGCCTGACCGCCCATaGGGTGTATCTCTCCTCCCGGGGAGCAGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: RCVLAPLLPDRP*GVSLLPGSRRS
Trigger: GCTCCTTCTGCTCCCCGGGAGGAGAGATACACCCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGACGCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 72 bp CGCGAATCTCCACCTGCACCACAGCGCCCAGCAGCGTaGCGGCGACGAAGCTGTAGTGGTCCCGCCGCTCGC +
Preference number: 6 (lower is better)
Translates to: RESPPAPQRPAA*RRRSCSGPAAR
Trigger: GCGAGCGGCGGGACCACTACAGCTTCGTCGCCGCCACGCTGCTGGGCGCTGTGGTGCAGGTGGAGATTCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 72 bp GGCGGTCCCTGGCGGGCTGAGCTCGGAGACGTCGAGTaGCAGGGAGTCGAGGGGAAAGCGGGGCGAGTGGTC +
Preference number: 6 (lower is better)
Translates to: GGPWRAELGDVE*QGVEGKAGRVV
Trigger: GACCACTCGCCCCGCTTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 72 bp AGAGCCAGAGCAGGGAGCGCTGCGTCCTGGCGCCGCTaGTGCCTGACCGCCCATGGGGTGTATCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RARAGSAASWRR*CLTAHGVYLSS
Trigger: GGAGGAGAGATACACCCCATGGGCGGTCAGGCAGCAGCGGCGCCAGGACGCAGCGCTCCCTGCTCTGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 72 bp AGGCGCCGCGCAGTGCGGATGATGCCGGTGTCCGGGTaGACGTGGAAGTCGTCCAGCAGCGGGGAGTCATCG +
Preference number: 6 (lower is better)
Translates to: RRRAVRMMPVSG*TWKSSSSGESS
Trigger: CGATGACTCCCCGCTGCTGGACGACTTCCACGTGCACCCGGACACCGGCATCATCCGCACTGCGCGGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 72 bp GCGGTCCCTGGCGGGCTGAGCTCGGAGACGTCGAGTTaGAGGGAGTCGAGGGGAAAGCGGGGCGAGTGGTCA +
Preference number: 6 (lower is better)
Translates to: AVPGGLSSETSS*RESRGKRGEWS
Trigger: TGACCACTCGCCCCGCTTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 72 bp CGGATCGTGGGCAACTGGCAGGCGGAAGGCGGTCCCTaGCGGGCTGAGCTCGGAGACGTCGAGTTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: RIVGNWQAEGGP*RAELGDVELQG
Trigger: TCCCTGCAACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGCCTGCCAGTTGCCCACGATCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 72 bp AGTGCTGAACAGTCCGGCGTCCGGATCGTGGGCAACTaGCAGGCGGAAGGCGGTCCCTGGCGGGCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: SAEQSGVRIVGN*QAEGGPWRAEL
Trigger: GAGCTCAGCCCGCCAGGGACCGCCTTCCGCCTGCCAGTTGCCCACGATCCGGACGCCGGACTGTTCAGCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 90 bp CAGGCGGAAGGCGGTCCCTGGCGGGCTGAGCTCGGAGACGTCGAGTaGCAGGGAGTCGAGGGGAAAGCGGGGCGAGTGGTCATTCACGTC +
Preference number: 6 (lower is better)
Translates to: QAEGGPWRAELGDVE*QGVEGKAGRVVIHV
Trigger: GACGTGAATGACCACTCGCCCCGCTTTCCCCTCGACTCCCTGCAACTCGACGTCTCCGAGCTCAGCCCGCCAGGGACCGCCTTCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 72 bp CGCGCAGTGCGGATGATGCCGGTGTCCGGGTGCACGTaGAAGTCGTCCAGCAGCGGGGAGTCATCGGAGTCC +
Preference number: 6 (lower is better)
Translates to: RAVRMMPVSGCT*KSSSSGESSES
Trigger: GGACTCCGATGACTCCCCGCTGCTGGACGACTTCCACGTGCACCCGGACACCGGCATCATCCGCACTGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 90 bp CAACTGGAAGAACGGGCCTGCGGGGTCCTTGGGCAGGTCGGACGGTaGCACCAGGGTGTAGCCCTGAGTGCTGAACAGTCCGGCGTCCGG +
Preference number: 6 (lower is better)
Translates to: QLEERACGVLGQVGR*HQGVALSAEQSGVR
Trigger: CCGGACGCCGGACTGTTCAGCACTCAGGGCTACACCCTGGTGCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCCCGTTCTTCCAGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 72 bp GCCTGCACCGTGAGCACAACCACGGGCTGCGTCTCGTaGTCCAGGGGCTTCCGGGTGCGAATAGTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: ACTVSTTTGCVS*SRGFRVRIVPS
Trigger: GCTGGGCACTATTCGCACCCGGAAGCCCCTGGATCACGAGACGCAGCCCGTGGTTGTGCTCACGGTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000504580.1
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638365.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS CCA 72 bp GGTAGCGCAACTGGAAGAACGGGCCTGCGGGGTCCTTaGGCAGGTCGGACGGTTGCACCAGGGTGTAGCCCT +
Preference number: 6 (lower is better)
Translates to: GSATGRTGLRGP*AGRTVAPGCSP
Trigger: AGGGCTACACCCTGGTGCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCCCGTTCTTCCAGTTGCGCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 72 bp CAGCACCCCCAGGGCTCTGTCGATGGCAAAGACGCCTaGCTGCGGGCTGGCGATGGAGTACCGGATGAGTCC +
Preference number: 6 (lower is better)
Translates to: QHPQGSVDGKDA*LRAGDGVPDES
Trigger: GGACTCATCCGGTACTCCATCGCCAGCCCGCAGCCAGGCGTCTTTGCCATCGACAGAGCCCTGGGGGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS CAA 72 bp GAACGGGCCTGCGGGGTCCTTGGGCAGGTCGGACGGTaGCACCAGGGTGTAGCCCTGAGTGCTGAACAGTCC +
Preference number: 6 (lower is better)
Translates to: ERACGVLGQVGR*HQGVALSAEQS
Trigger: GGACTGTTCAGCACTCAGGGCTACACCCTGGTGCAACCGTCCGACCTGCCCAAGGACCCCGCAGGCCCGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 72 bp TGTCAGCACCAGCAGGGCTGCCTGAGGATGCACGCCTaGGTCCTCGGCCCTGAGAGTCAGCGTGAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: CQHQQGCLRMHA*VLGPESQRELP
Trigger: CGGGAGCTCACGCTGACTCTCAGGGCCGAGGACCAAGGCGTGCATCCTCAGGCAGCCCTGCTGGTGCTGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
CDS CAA 90 bp ACCAGCGTGTCCGGGGGAAGCCCCTCATCTACGGAAAGGGTGAGGTaGAACAACTGGGCAGAGGAGCCCGAGGCCGCCCACAGCCACACG +
Preference number: 6 (lower is better)
Translates to: TSVSGGSPSSTERVR*NNWAEEPEAAHSHT
Trigger: CGTGTGGCTGTGGGCGGCCTCGGGCTCCTCTGCCCAGTTGTTCAACCTCACCCTTTCCGTAGATGAGGGGCTTCCCCCGGACACGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 90 bp TGCAGGGAGTCGAGGGGAAAGCGGGGCGAGTGGTCATTCACGTCGTaGACGCGAATCTCCACCTGCACCACAGCGCCCAGCAGCGTGGCG +
Preference number: 6 (lower is better)
Translates to: CRESRGKRGEWSFTS*TRISTCTTAPSSVA
Trigger: CGCCACGCTGCTGGGCGCTGTGGTGCAGGTGGAGATTCGCGTCAACGACGTGAATGACCACTCGCCCCGCTTTCCCCTCGACTCCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 90 bp GATAACGACTGTCAGCACCAGCAGGGCTGCCTGAGGATGCACGCCTaGGTCCTCGGCCCTGAGAGTCAGCGTGAGCTCCCGCTGCTCGCC +
Preference number: 6 (lower is better)
Translates to: DNDCQHQQGCLRMHA*VLGPESQRELPLLA
Trigger: GGCGAGCAGCGGGAGCTCACGCTGACTCTCAGGGCCGAGGACCAAGGCGTGCATCCTCAGGCAGCCCTGCTGGTGCTGACAGTCGTTATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
CDS TCA 72 bp GGTCGGACGGTTGCACCAGGGTGTAGCCCTGAGTGCTaGACAGTCCGGCGTCCGGATCGTGGGCAACTGGCA +
Preference number: 6 (lower is better)
Translates to: GRTVAPGCSPEC*TVRRPDRGQLA
Trigger: TGCCAGTTGCCCACGATCCGGACGCCGGACTGTTCAGCACTCAGGGCTACACCCTGGTGCAACCGTCCGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 72 bp CCTGCAGCTCACGCAGACAGGGAAGTAAGCTCTAGCTaGCTCTGCCGCGGCAGCCACCTCTTCTGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: PAAHADREVSSS*LCRGSHLFCPW
Trigger: CCAGGGGCAGAAGAGGTGGCTGCCGCGGCAGAGGCAGCTAGAGCTTACTTCCCTGTCTGCGTGAGCTGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp TCTCCTCCGTGCTCAGCGGCGGGGACCCCGCGTCCGTaGCCACCAGTAGTAACTCATACAGATCGCGGCTCT +
Preference number: 6 (lower is better)
Translates to: SPPCSAAGTPRP*PPVVTHTDRGS
Trigger: AGAGCCGCGATCTGTATGAGTTACTACTGGTGGCCACGGACGCGGGGTCCCCGCCGCTGAGCACGGAGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 72 bp TCCGGGGGAAGCCCCTCATCTACGGAAAGGGTGAGGTaGAACAACTGGGCAGAGGAGCCCGAGGCCGCCCAC +
Preference number: 6 (lower is better)
Translates to: SGGSPSSTERVR*NNWAEEPEAAH
Trigger: GTGGGCGGCCTCGGGCTCCTCTGCCCAGTTGTTCAACCTCACCCTTTCCGTAGATGAGGGGCTTCCCCCGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 72 bp CGAGGGGAAAGCGGGGCGAGTGGTCATTCACGTCGTTaGCGCGAATCTCCACCTGCACCACAGCGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: RGESGASGHSRR*RESPPAPQRPA
Trigger: TGCTGGGCGCTGTGGTGCAGGTGGAGATTCGCGTCAACGACGTGAATGACCACTCGCCCCGCTTTCCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 72 bp GAGTGGTCATTCACGTCGTTGACGCGAATCTCCACCTaGACCACAGCGCCCAGCAGCGTGGCGGCGACGAAG +
Preference number: 6 (lower is better)
Translates to: EWSFTSLTRIST*TTAPSSVAATK
Trigger: CTTCGTCGCCGCCACGCTGCTGGGCGCTGTGGTGCAGGTGGAGATTCGCGTCAACGACGTGAATGACCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 72 bp TCGAGGGGAAAGCGGGGCGAGTGGTCATTCACGTCGTaGACGCGAATCTCCACCTGCACCACAGCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SRGKRGEWSFTS*TRISTCTTAPS
Trigger: GCTGGGCGCTGTGGTGCAGGTGGAGATTCGCGTCAACGACGTGAATGACCACTCGCCCCGCTTTCCCCTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 72 bp TGCTCCCGTCTCCAAGACCCACACCAAGCTCCCCTGTaGCCTCATCTTCCTTCTCCCAGTCACCGTCCGCGT +
Preference number: 6 (lower is better)
Translates to: CSRLQDPHQAPL*PHLPSPSHRPR
Trigger: ACGCGGACGGTGACTGGGAGAAGGAAGATGAGGCCACAGGGGAGCTTGGTGTGGGTCTTGGAGACGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 72 bp GGGCGCCTTCAGAGACACGGGCGACGCCTCCCTCTGTaGGAAAGAGCACGTGAATTGCTGGCCGGTTGTCAT +
Preference number: 6 (lower is better)
Translates to: GRLQRHGRRLPL*ERARELLAGCH
Trigger: ATGACAACCGGCCAGCAATTCACGTGCTCTTTCTCACAGAGGGAGGCGTCGCCCGTGTCTCTGAAGGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 72 bp CATGACTACAGTGCCAGGGGCCGCGGCCTCGGACACTaGGGCCTTGTAATGCTGTTGGCTGAAGAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: HDYSARGRGLGH*GLVMLLAEERW
Trigger: CCACCTCTCTTCAGCCAACAGCATTACAAGGCCTCAGTGTCCGAGGCCGCGGCCCCTGGCACTGTAGTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 72 bp GCTCACGCAGACAGGGAAGTAAGCTCTAGCTGCCTCTaGCGCGGCAGCCACCTCTTCTGCCCCTGGATTTCT +
Preference number: 6 (lower is better)
Translates to: AHADREVSSSCL*RGSHLFCPWIS
Trigger: AGAAATCCAGGGGCAGAAGAGGTGGCTGCCGCGGCAGAGGCAGCTAGAGCTTACTTCCCTGTCTGCGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS GCA 72 bp CGAAGTCTCCCTCTCCGCCTTCCAAGGACAGAGAGATaGTCCCGTCTCCAAGACCCACACCAAGCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: RSLPLRLPRTER*SRLQDPHQAPL
Trigger: CAGGGGAGCTTGGTGTGGGTCTTGGAGACGGGAGCATCTCTCTGTCCTTGGAAGGCGGAGAGGGAGACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 72 bp CTAAGAGGCGAGGCTGCACGCTGGGGGCCAAGTGGGTaGGCCTGTGTTTGCAGCATTTGTGTCATCGGTGAG +
Preference number: 6 (lower is better)
Translates to: LRGEAARWGPSG*ACVCSICVIGE
Trigger: CTCACCGATGACACAAATGCTGCAAACACAGGCGCACCCACTTGGCCCCCAGCGTGCAGCCTCGCCTCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp AGGTCCTGGGCCACCACTTTCAGCTCCACCGCCTCCTaGACCTCTCGGTCTAGAGTCCGGATAGTGCTGATC +
Preference number: 6 (lower is better)
Translates to: RSWATTFSSTAS*TSRSRVRIVLI
Trigger: GATCAGCACTATCCGGACTCTAGACCGAGAGGTCCAGGAGGCGGTGGAGCTGAAAGTGGTGGCCCAGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 72 bp GGTCTGAGTCCCTCGGGATACCCGAGTCTGGCACCCTaGACTCGTGGTCACTCAGAGCTGAGTCTGAGCACT +
Preference number: 6 (lower is better)
Translates to: GLSPSGYPSLAP*TRGHSELSLST
Trigger: AGTGCTCAGACTCAGCTCTGAGTGACCACGAGTCCAGGGTGCCAGACTCGGGTATCCCGAGGGACTCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp CGGAGGCACCTGCCCCAGGTTTACTGCCGGCATTCTTaGTGGGACTGCTTTAATCCCAGGCTGGGCTACTGC +
Preference number: 6 (lower is better)
Translates to: RRHLPQVYCRHS*WDCFNPRLGYC
Trigger: GCAGTAGCCCAGCCTGGGATTAAAGCAGTCCCACCAAGAATGCCGGCAGTAAACCTGGGGCAGGTGCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 90 bp TTCGCCCATCTTCCGCCCACAAGGGCTCATTTCTCCTCCAGCTCCTaGGGAAGGCTCTCGGGTAACTGCCAGCTTGTGGCAGGATCGCAG +
Preference number: 6 (lower is better)
Translates to: FAHLPPTRAHFSSSS*GRLSGNCQLVAGSQ
Trigger: CTGCGATCCTGCCACAAGCTGGCAGTTACCCGAGAGCCTTCCCAAGGAGCTGGAGGAGAAATGAGCCCTTGTGGGCGGAAGATGGGCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS TCA 72 bp AGGGGCTTCCGGGTGCGAATAGTGCCCAGCCGCGGGTaGATGGAGAACTTTCCGCCGAGATCACCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: RGFRVRIVPSRG*MENFPPRSPEE
Trigger: TTCTTCTGGTGATCTCGGCGGAAAGTTCTCCATTCACCCGCGGCTGGGCACTATTCGCACCCGGAAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000504580.1
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638365.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS CCA 72 bp TTCCGCCCACAAGGGCTCATTTCTCCTCCAGCTCCTTaGGAAGGCTCTCGGGTAACTGCCAGCTTGTGGCAG +
Preference number: 6 (lower is better)
Translates to: FRPQGLISPPAP*EGSRVTASLWQ
Trigger: CTGCCACAAGCTGGCAGTTACCCGAGAGCCTTCCCAAGGAGCTGGAGGAGAAATGAGCCCTTGTGGGCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp TGGCAGAGAACCAAGATGGTAGGGGATGGGAGAGCGTaGGTGTTTCGGAGGCACCTGCCCCAGGTTTACTGC +
Preference number: 6 (lower is better)
Translates to: WQRTKMVGDGRA*VFRRHLPQVYC
Trigger: GCAGTAAACCTGGGGCAGGTGCCTCCGAAACACCCACGCTCTCCCATCCCCTACCATCTTGGTTCTCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 72 bp GCTGTCACCTGCAGAAAGCAGTGTCCAACCGGGGCATaGTCTGCAATGGTGGCATTGTACACCTGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: AVTCRKQCPTGA*SAMVALYTCLQ
Trigger: CTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGTTGGACACTGCTTTCTGCAGGTGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp CGTGCGAGGTACAAGGCTGTGCCAGGGGGCGTGGTCTaGGATATTCTAATCTCATCCGAGGTCCTGAGGAAC +
Preference number: 6 (lower is better)
Translates to: RARYKAVPGGVV*DILISSEVLRN
Trigger: GTTCCTCAGGACCTCGGATGAGATTAGAATATCCCAGACCACGCCCCCTGGCACAGCCTTGTACCTCGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS CCA 72 bp ACCATCACATCAGTTTCCCCAGATAGGCAGGAGAGCTaGTCTGAGTCCCTCGGGATACCCGAGTCTGGCACC +
Preference number: 6 (lower is better)
Translates to: TITSVSPDRQES*SESLGIPESGT
Trigger: GGTGCCAGACTCGGGTATCCCGAGGGACTCAGACCAGCTCTCCTGCCTATCTGGGGAAACTGATGTGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp AGGCACCTGCCCCAGGTTTACTGCCGGCATTCTTGGTaGGACTGCTTTAATCCCAGGCTGGGCTACTGCTGT +
Preference number: 6 (lower is better)
Translates to: RHLPQVYCRHSW*DCFNPRLGYCC
Trigger: ACAGCAGTAGCCCAGCCTGGGATTAAAGCAGTCCCACCAAGAATGCCGGCAGTAAACCTGGGGCAGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp GCTCCTTGGGAAGGCTCTCGGGTAACTGCCAGCTTGTaGCAGGATCGCAGAAAAATCCAGGAGCCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: APWEGSRVTASL*QDRRKIQEPLQ
Trigger: CTGAAGAGGCTCCTGGATTTTTCTGCGATCCTGCCACAAGCTGGCAGTTACCCGAGAGCCTTCCCAAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp GCAGAAAGCAGTGTCCAACCGGGGCATGCTCTGCAATaGTGGCATTGTACACCTGCCTCCAGAAGATGGGCT +
Preference number: 6 (lower is better)
Translates to: AESSVQPGHALQ*WHCTPASRRWA
Trigger: AGCCCATCTTCTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGTTGGACACTGCTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CCA 72 bp GAAAGCAGTGTCCAACCGGGGCATGCTCTGCAATGGTaGCATTGTACACCTGCCTCCAGAAGATGGGCTCAT +
Preference number: 6 (lower is better)
Translates to: ESSVQPGHALQW*HCTPASRRWAH
Trigger: ATGAGCCCATCTTCTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGTTGGACACTGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 72 bp CAGTGTCCAACCGGGGCATGCTCTGCAATGGTGGCATaGTACACCTGCCTCCAGAAGATGGGCTCATTGTCA +
Preference number: 6 (lower is better)
Translates to: QCPTGACSAMVA*YTCLQKMGSLS
Trigger: TGACAATGAGCCCATCTTCTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGTTGGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS TCA 72 bp CCTGTGTCACGGTCATTTGCTGAGACCACAGTGATGTaGCTCCCTAGAGGGGTGCTTTCCTTGACATGGGTG +
Preference number: 6 (lower is better)
Translates to: PVSRSFAETTVM*LPRGVLSLTWV
Trigger: CACCCATGTCAAGGAAAGCACCCCTCTAGGGAGTCACATCACTGTGGTCTCAGCAAATGACCGTGACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp AGGGTTCCTCTTGGGCCTCCTGAATTCATTCTTGCGTaGGGTCCAAGAACCCTCTCTTGGGGTCTAGACCAG +
Preference number: 6 (lower is better)
Translates to: RVPLGPPEFILA*GPRTLSWGLDQ
Trigger: CTGGTCTAGACCCCAAGAGAGGGTTCTTGGACCTCACGCAAGAATGAATTCAGGAGGCCCAAGAGGAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507542.2
ENST00000640742.1
CDS GCA 72 bp CTGCCCCAGGTTTACTGCCGGCATTCTTGGTGGGACTaGTTTAATCCCAGGCTGGGCTACTGCTGTTATCAA +
Preference number: 6 (lower is better)
Translates to: LPQVYCRHSWWD*FNPRLGYCCYQ
Trigger: TTGATAACAGCAGTAGCCCAGCCTGGGATTAAAGCAGTCCCACCAAGAATGCCGGCAGTAAACCTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 72 bp GATATAAGCTGCAGAAAGCAGTGTCCAACCGGGGCATaGTCTGCAATGGTGGCATTGTACACCTGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: DISCRKQCPTGA*SAMVALYTCLQ
Trigger: CTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGTTGGACACTGCTTTCTGCAGCTTATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456341.2
ENST00000640896.1
CDS CCA 72 bp TCATTCACGTCCTCCAGGTCCACACGAACAAAGGCTTaGGCACTTAGCCCACCCTTCACCAGGGCTAAATGT +
Preference number: 6 (lower is better)
Translates to: SFTSSRSTRTKA*ALSPPFTRAKC
Trigger: ACATTTAGCCCTGGTGAAGGGTGGGCTAAGTGCCCAAGCCTTTGTTCGTGTGGACCTGGAGGACGTGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS CAA 72 bp ACCTCGTTACTGCAGTCGTCAGTTTTCTGGAAGGCTTaGAGCACACTGGCATCCCGGGTCACTCTCAAGTCC +
Preference number: 6 (lower is better)
Translates to: TSLLQSSVFWKA*STLASRVTLKS
Trigger: GGACTTGAGAGTGACCCGGGATGCCAGTGTGCTCAAAGCCTTCCAGAAAACTGACGACTGCAGTAACGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 90 bp ACAGGGACCACCTCGTTACTGCAGTCGTCAGTTTTCTGGAAGGCTTaGAGCACACTGGCATCCCGGGTCACTCTCAAGTCCGCATCTAAA +
Preference number: 6 (lower is better)
Translates to: TGTTSLLQSSVFWKA*STLASRVTLKSASK
Trigger: TTTAGATGCGGACTTGAGAGTGACCCGGGATGCCAGTGTGCTCAAAGCCTTCCAGAAAACTGACGACTGCAGTAACGAGGTGGTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 90 bp ACAGGTGGTGCTGCAGCCTTCCCCTTGATCTCCTTCCCCAAATGTTaGGCTGGCTTCTGCTGTTTCGGCAGTCACCATCACATCAGTTTC +
Preference number: 6 (lower is better)
Translates to: TGGAAAFPLISFPKC*AGFCCFGSHHHISF
Trigger: GAAACTGATGTGATGGTGACTGCCGAAACAGCAGAAGCCAGCCAAACATTTGGGGAAGGAGATCAAGGGGAAGGCTGCAGCACCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp GGGGAAGAAGGGCCTGTTATCATTGATGTCAGTAACTaGGACGTAAACCGCCATGGTGGCGTTTCGTGGTGG +
Preference number: 6 (lower is better)
Translates to: GEEGPVIIDVSN*DVNRHGGVSWW
Trigger: CCACCACGAAACGCCACCATGGCGGTTTACGTCTCAGTTACTGACATCAATGATAACAGGCCCTTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS GCA 72 bp AGCTCTAGCTGCCTCTGCCGCGGCAGCCACCTCTTCTaGCCCTGGATTTCTTTAAACGAATCTCATCTCTTT +
Preference number: 6 (lower is better)
Translates to: SSSCLCRGSHLF*PWISLNESHLF
Trigger: AAAGAGATGAGATTCGTTTAAAGAAATCCAGGGGCAGAAGAGGTGGCTGCCGCGGCAGAGGCAGCTAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS GCA 72 bp ACCGGGGCATGCTCTGCAATGGTGGCATTGTACACCTaGCTCCAGAAGATGGGCTCATTGTCATTCACATCA +
Preference number: 6 (lower is better)
Translates to: TGACSAMVALYT*LQKMGSLSFTS
Trigger: TGATGTGAATGACAATGAGCCCATCTTCTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS GCA 72 bp AGCTGTGGAACTCAATGGAGGGCAGCCACTGTCAGATaGCAGAATGACAAGCTCATGGCTAGCACTTGCTTC +
Preference number: 6 (lower is better)
Translates to: SCGTQWRAATVR*QNDKLMASTCF
Trigger: GAAGCAAGTGCTAGCCATGAGCTTGTCATTCTGGCATCTGACAGTGGCTGCCCTCCATTGAGTTCCACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp CTGGTCAGTGGCAAGAACATTGATGATCTCGGTGCCTaGCTGGGTCTCATCACTGATGCTCGTCACATAGGT +
Preference number: 6 (lower is better)
Translates to: LVSGKNIDDLGA*LGLITDARHIG
Trigger: ACCTATGTGACGAGCATCAGTGATGAGACCCAGCCAGGCACCGAGATCATCAATGTTCTTGCCACTGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp AGACGGGACACAGTGACTAGTGTGCCAAATGAGGGGTaGATGAGAAATGGATTCGTGCCAGGGTTGTGGGAT +
Preference number: 6 (lower is better)
Translates to: RRDTVTSVPNEG*MRNGFVPGLWD
Trigger: ATCCCACAACCCTGGCACGAATCCATTTCTCATCCACCCCTCATTTGGCACACTAGTCACTGTGTCCCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp ACCAAGAGACCCGTGGTTGTCCTGGCTGGAATGCCCTaGTCTGTAACTTTTAACTGCAGCCAGATAGGGAAG +
Preference number: 6 (lower is better)
Translates to: TKRPVVVLAGMP*SVTFNCSQIGK
Trigger: CTTCCCTATCTGGCTGCAGTTAAAAGTTACAGACCAGGGCATTCCAGCCAGGACAACCACGGGTCTCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp AGCCTTCCCCTTGATCTCCTTCCCCAAATGTTTGGCTaGCTTCTGCTGTTTCGGCAGTCACCATCACATCAG +
Preference number: 6 (lower is better)
Translates to: SLPLDLLPQMFG*LLLFRQSPSHQ
Trigger: CTGATGTGATGGTGACTGCCGAAACAGCAGAAGCCAGCCAAACATTTGGGGAAGGAGATCAAGGGGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 90 bp TCTGCAATGGTGGCATTGTACACCTGCCTCCAGAAGATGGGCTCATaGTCATTCACATCATCTACGGTGATGCTCACCAGGCAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: SAMVALYTCLQKMGS*SFTSSTVMLTRQVA
Trigger: TGCCACCTGCCTGGTGAGCATCACCGTAGATGATGTGAATGACAATGAGCCCATCTTCTGGAGGCAGGTGTACAATGCCACCATTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 90 bp TGCAGAAAGCAGTGTCCAACCGGGGCATGCTCTGCAATGGTGGCATaGTACACCTGCCTCCAGAAGATGGGCTCATTGTCATTCACATCA +
Preference number: 6 (lower is better)
Translates to: CRKQCPTGACSAMVA*YTCLQKMGSLSFTS
Trigger: TGATGTGAATGACAATGAGCCCATCTTCTGGAGGCAGGTGTACAATGCCACCATTGCAGAGCATGCCCCGGTTGGACACTGCTTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 90 bp CCAGGAGCCTCTTCAGTGTCTGAGCCAGAGAAGAAAAGACTTTGTTaGGCAAACAAACCGACGGCCCAGGAATTCCCGAGGTTACATCTG +
Preference number: 6 (lower is better)
Translates to: PGASSVSEPEKKRLC*ANKPTAQEFPRLHL
Trigger: CAGATGTAACCTCGGGAATTCCTGGGCCGTCGGTTTGTTTGCCAAACAAAGTCTTTTCTTCTCTGGCTCAGACACTGAAGAGGCTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CAA 90 bp ATTCTAATCTCATCCGAGGTCCTGAGGAACGCTGGGTGGTTGTCATaGACATCCATGACTGTTATGTTGACCTCGGTGCTGCTGCAGGCT +
Preference number: 6 (lower is better)
Translates to: ILISSEVLRNAGWLS*TSMTVMLTSVLLQA
Trigger: AGCCTGCAGCAGCACCGAGGTCAACATAACAGTCATGGATGTCAATGACAACCACCCAGCGTTCCTCAGGACCTCGGATGAGATTAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS TCA 72 bp TCGGCATTAATGACAGCTGTGAGCCCACCACCGTCTTaGGCAGAGACCATCAACGAAAGTGTGGTAGATTCC +
Preference number: 6 (lower is better)
Translates to: SALMTAVSPPPS*AETINESVVDS
Trigger: GGAATCTACCACACTTTCGTTGATGGTCTCTGCTCAAGACGGTGGTGGGCTCACAGCTGTCATTAATGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS TCA 72 bp ATGCTACAGTCTCTGGCCACAGCACTAAATGTATGCTaGGATCTGGCTTCACGGTCGAGGGTGTTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: MLQSLATALNVC*DLASRSRVLLV
Trigger: AACCAGCAACACCCTCGACCGTGAAGCCAGATCTCAGCATACATTTAGTGCTGTGGCCAGAGACTGTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp AAAGAGGCACTGAGGAGTGTAGGGACAGTCTTGAATTaGATACAACCCCACCTTCCCCATCTCCTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: KEALRSVGTVLN*IQPHLPHLLAV
Trigger: CACTGCCAGGAGATGGGGAAGGTGGGGTTGTATTCAATTCAAGACTGTCCCTACACTCCTCAGTGCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623568.1
ENST00000640328.1
CDS CCA 72 bp AGCTGCCTCTGCCGCGGCAGCCACCTCTTCTGCCCCTaGATTTCTTTAAACGAATCTCATCTCTTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SCLCRGSHLFCP*ISLNESHLFFS
Trigger: AGAGAAAAAGAGATGAGATTCGTTTAAAGAAATCCAGGGGCAGAAGAGGTGGCTGCCGCGGCAGAGGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp GAATCAATGGCAAAAGATGGTCCACACTCTGCGGTGTaGACCATCTTTGATTGCAGGGAGCCGAGATTGCAG +
Preference number: 6 (lower is better)
Translates to: ESMAKDGPHSAV*TIFDCREPRLQ
Trigger: CTGCAATCTCGGCTCCCTGCAATCAAAGATGGTCCACACCGCAGAGTGTGGACCATCTTTTGCCATTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000456341.2
ENST00000639062.3
ENST00000639512.1
ENST00000640896.1
CDS CAA 90 bp GGTAGCTGGATCCCTTTCCCTGTCGATATCTTGAGAAACACAGATTaGCCCATCATGAGGGTCGATCCGGAATGCCTGAGGTGCTTCATA +
Preference number: 6 (lower is better)
Translates to: GSWIPFPVDILRNTD*PIMRVDPECLRCFI
Trigger: TATGAAGCACCTCAGGCATTCCGGATCGACCCTCATGATGGGCAAATCTGTGTTTCTCAAGATATCGACAGGGAAAGGGATCCAGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CAA 90 bp TGGGATATTCTAATCTCATCCGAGGTCCTGAGGAACGCTGGGTGGTaGTCATTGACATCCATGACTGTTATGTTGACCTCGGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: WDILISSEVLRNAGW*SLTSMTVMLTSVLL
Trigger: CAGCAGCACCGAGGTCAACATAACAGTCATGGATGTCAATGACAACCACCCAGCGTTCCTCAGGACCTCGGATGAGATTAGAATATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS CAA 90 bp CTAGGTGGATCTCCCAGGTCAGAGCACAGAATGACAAGGGTAAAATaGCTGATTTGCTCCCGGTCCAAAGCACGAGTGGTTGAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: LGGSPRSEHRMTRVK*LICSRSKARVVESS
Trigger: AGAACTCTCAACCACTCGTGCTTTGGACCGGGAGCAAATCAGCAATTTTACCCTTGTCATTCTGTGCTCTGACCTGGGAGATCCACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp AGTGATCTCAGTCGCCGGTCTGTCACATTCACAGCCTaGTCAGATGCTGTTACTGTCAGGATGACAGTTGGA +
Preference number: 6 (lower is better)
Translates to: SDLSRRSVTFTA*SDAVTVRMTVG
Trigger: TCCAACTGTCATCCTGACAGTAACAGCATCTGATCAGGCTGTGAATGTGACAGACCGGCGACTGAGATCACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp AGTCCATACTCTCTACGTCAGACATGCTGCTCTCCCTaGATTCATTCTTGCGTGAGGTCCAAGAACCCTCTC +
Preference number: 6 (lower is better)
Translates to: SPYSLRQTCCSP*IHSCVRSKNPL
Trigger: GAGAGGGTTCTTGGACCTCACGCAAGAATGAATTCAGGGAGAGCAGCATGTCTGACGTAGAGAGTATGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504580.1
ENST00000638365.1
CDS TCA 72 bp TTTCTGGTAAATGCAGAGGGTTCCTCTTGGGCCTCCTaGATTCATTCTTGCGTGAGGTCCAAGAACCCTCTC +
Preference number: 6 (lower is better)
Translates to: FLVNAEGSSWAS*IHSCVRSKNPL
Trigger: GAGAGGGTTCTTGGACCTCACGCAAGAATGAATTCAGGAGGCCCAAGAGGAACCCTCTGCATTTACCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507542.2
ENST00000640742.1
CDS CCA 72 bp ACCTCAGTTTCCTTCACTGGTTTTGCGTTCTCTTCCTaGCTTCTGAACACTATAGCACCCCAGAGCTCAGTC +
Preference number: 6 (lower is better)
Translates to: TSVSFTGFAFSS*LLNTIAPQSSV
Trigger: GACTGAGCTCTGGGGTGCTATAGTGTTCAGAAGCCAGGAAGAGAACGCAAAACCAGTGAAGGAAACTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS CAA 72 bp ATCCCTTTCCCTGTCGATATCTTGAGAAACACAGATTaGCCCATCATGAGGGTCGATCCGGAATGCCTGAGG +
Preference number: 6 (lower is better)
Translates to: IPFPVDILRNTD*PIMRVDPECLR
Trigger: CCTCAGGCATTCCGGATCGACCCTCATGATGGGCAAATCTGTGTTTCTCAAGATATCGACAGGGAAAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CAA 72 bp TGGTGCCCCCGGTGCTCACGATCCAGTGCCACCCAATaGATTAACTCTCCTGTATTAGGATTCATCTTGAAG +
Preference number: 6 (lower is better)
Translates to: WCPRCSRSSATQ*INSPVLGFILK
Trigger: CTTCAAGATGAATCCTAATACAGGAGAGTTAATCAATTGGGTGGCACTGGATCGTGAGCACCGGGGGCACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS CAA 72 bp TCTCCCAGGTCAGAGCACAGAATGACAAGGGTAAAATaGCTGATTTGCTCCCGGTCCAAAGCACGAGTGGTT +
Preference number: 6 (lower is better)
Translates to: SPRSEHRMTRVK*LICSRSKARVV
Trigger: AACCACTCGTGCTTTGGACCGGGAGCAAATCAGCAATTTTACCCTTGTCATTCTGTGCTCTGACCTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 72 bp AACACAGATTTGCCCATCATGAGGGTCGATCCGGAATaGCTGAGGTGCTTCATAGCTCAGGAATCCATCATA +
Preference number: 6 (lower is better)
Translates to: NTDLPIMRVDPE*LRCFIAQESII
Trigger: TATGATGGATTCCTGAGCTATGAAGCACCTCAGGCATTCCGGATCGACCCTCATGATGGGCAAATCTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS GCA 72 bp TCCCAGACACGAACAATGACTGTAGTGCTCACATTTTaGAAGAATCCGTCCTCGGGGATCCAAGCAAACACT +
Preference number: 6 (lower is better)
Translates to: SQTRTMTVVLTF*KNPSSGIQANT
Trigger: AGTGTTTGCTTGGATCCCCGAGGACGGATTCTTGCAAAATGTGAGCACTACAGTCATTGTTCGTGTCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp CCCATCCTTAGCTTCCACCAGGAGATCATAGGTAGCTaGATCCCTTTCCCTGTCGATATCTTGAGAAACACA +
Preference number: 6 (lower is better)
Translates to: PILSFHQEIIGS*IPFPVDILRNT
Trigger: TGTGTTTCTCAAGATATCGACAGGGAAAGGGATCCAGCTACCTATGATCTCCTGGTGGAAGCTAAGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp GATGCTGTATGTTACTTTTCCATTCCTTCCTTCGTCTaGATCGTGAGCAGTTATGTGGTGGACCAAGGAGCC +
Preference number: 6 (lower is better)
Translates to: DAVCYFSIPSFV*IVSSYVVDQGA
Trigger: GGCTCCTTGGTCCACCACATAACTGCTCACGATCCAGACGAAGGAAGGAATGGAAAAGTAACATACAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp AAGTCCAGGTCATCAGCTCTCACAATGACAGTTGTCTaGTTTGTAGGCGACTCGGGGGAAAGAAACACATCA +
Preference number: 6 (lower is better)
Translates to: KSRSSALTMTVV*FVGDSGERNTS
Trigger: TGATGTGTTTCTTTCCCCCGAGTCGCCTACAAACCAGACAACTGTCATTGTGAGAGCTGATGACCTGGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 72 bp ATCCCAGACACGAACAATGACTGTAGTGCTCACATTTaGCAAGAATCCGTCCTCGGGGATCCAAGCAAACAC +
Preference number: 6 (lower is better)
Translates to: IPDTNNDCSAHI*QESVLGDPSKH
Trigger: GTGTTTGCTTGGATCCCCGAGGACGGATTCTTGCAAAATGTGAGCACTACAGTCATTGTTCGTGTCTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CAA 72 bp TCCACCCAGACCACTAAGGAGGCAGTTGCATCACCTTaGTCTTTGGCTTGGACTGTGAGGCAGTATTTATTG +
Preference number: 6 (lower is better)
Translates to: STQTTKEAVASP*SLAWTVRQYLL
Trigger: CAATAAATACTGCCTCACAGTCCAAGCCAAAGACAAAGGTGATGCAACTGCCTCCTTAGTGGTCTGGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 90 bp TATGGTGACATCGGCATTAATGACAGCTGTGAGCCCACCACCGTCTaGAGCAGAGACCATCAACGAAAGTGTGGTAGATTCCAAATGACT +
Preference number: 6 (lower is better)
Translates to: YGDIGINDSCEPTTV*SRDHQRKCGRFQMT
Trigger: AGTCATTTGGAATCTACCACACTTTCGTTGATGGTCTCTGCTCAAGACGGTGGTGGGCTCACAGCTGTCATTAATGCCGATGTCACCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS CAA 90 bp ACTCTGGTGCGTGATCGTTTTCATCTTCAACAGTGCAGAGGATTGTaGTGGTGCTGGACAATGAAGGGAATCCCCCATCTCGTACTAGTA +
Preference number: 6 (lower is better)
Translates to: TLVRDRFHLQQCRGL*WCWTMKGIPHLVLV
Trigger: TACTAGTACGAGATGGGGGATTCCCTTCATTGTCCAGCACCACAACAATCCTCTGCACTGTTGAAGATGAAAACGATCACGCACCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 90 bp TGTGGGAAAAGAAGGACTGTGGTCATTGGCATCCAAAACTCTAACTaGCAGGTGTATTACAGAGCTCCTAGGTGGATCTCCCAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: CGKRRTVVIGIQNSN*QVYYRAPRWISQVR
Trigger: TCTGACCTGGGAGATCCACCTAGGAGCTCTGTAATACACCTGCAAGTTAGAGTTTTGGATGCCAATGACCACAGTCCTTCTTTTCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp CATTCACAGCCTGATCAGATGCTGTTACTGTCAGGATaGCAGTTGGAATGCTTTCTCTGTCAAGACGGGACA +
Preference number: 6 (lower is better)
Translates to: HSQPDQMLLLSG*QLECFLCQDGT
Trigger: TGTCCCGTCTTGACAGAGAAAGCATTCCAACTGTCATCCTGACAGTAACAGCATCTGATCAGGCTGTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 72 bp CGTTTTCATCTTCAACAGTGCAGAGGATTGTTGTGGTaGTGGACAATGAAGGGAATCCCCCATCTCGTACTA +
Preference number: 6 (lower is better)
Translates to: RFHLQQCRGLLW*WTMKGIPHLVL
Trigger: TAGTACGAGATGGGGGATTCCCTTCATTGTCCAGCACCACAACAATCCTCTGCACTGTTGAAGATGAAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 72 bp TCAGAGCACAGAATGACAAGGGTAAAATTGCTGATTTaGTCCCGGTCCAAAGCACGAGTGGTTGAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: SEHRMTRVKLLI*SRSKARVVESS
Trigger: AGAACTCTCAACCACTCGTGCTTTGGACCGGGAGCAAATCAGCAATTTTACCCTTGTCATTCTGTGCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp GGTGGAGTCAATGGTAAAAAGGGACGACACGTTTCCTaGAATAAGCTCATAAGCCACTGTCCCATATATCCC +
Preference number: 6 (lower is better)
Translates to: GGVNGKKGRHVS*NKLISHCPIYP
Trigger: GGGATATATGGGACAGTGGCTTATGAGCTTATTCCAGGAAACGTGTCGTCCCTTTTTACCATTGACTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp TTCCACTTGATAGACCAAATGTTCGAAAGTCCAGGATaGGCTGTGTTCGCGTTTCTCGATAACGACTGTCAG +
Preference number: 6 (lower is better)
Translates to: FHLIDQMFESPG*AVFAFLDNDCQ
Trigger: CTGACAGTCGTTATCGAGAAACGCGAACACAGCCCATCCTGGACTTTCGAACATTTGGTCTATCAAGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
CDS CCA 72 bp GATCGTTTTCATCTTCAACAGTGCAGAGGATTGTTGTaGTGCTGGACAATGAAGGGAATCCCCCATCTCGTA +
Preference number: 6 (lower is better)
Translates to: DRFHLQQCRGLL*CWTMKGIPHLV
Trigger: TACGAGATGGGGGATTCCCTTCATTGTCCAGCACCACAACAATCCTCTGCACTGTTGAAGATGAAAACGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 72 bp CCATTCTTTCCAGAGTCCATGTCAATAGCTGTAATTTaGCCTATTACCCCTTGGGGAACAGGGCTCTCTTCG +
Preference number: 6 (lower is better)
Translates to: PFFPESMSIAVI*PITPWGTGLSS
Trigger: CGAAGAGAGCCCTGTTCCCCAAGGGGTAATAGGCAAAATTACAGCTATTGACATGGACTCTGGAAAGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CAA 72 bp AGAAAATACTCAGTTTGCCCATTCAGGCCTTCATCCTaGTCCACAGCTGAAAGCACAAGAACCACTGTTCCC +
Preference number: 6 (lower is better)
Translates to: RKYSVCPFRPSS*STAESTRTTVP
Trigger: GGGAACAGTGGTTCTTGTGCTTTCAGCTGTGGACAAGGATGAAGGCCTGAATGGGCAAACTGAGTATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 90 bp CCTTCAATATCCACCCAGACCACTAAGGAGGCAGTTGCATCACCTTaGTCTTTGGCTTGGACTGTGAGGCAGTATTTATTGCCATTTTCA +
Preference number: 6 (lower is better)
Translates to: PSISTQTTKEAVASP*SLAWTVRQYLLPFS
Trigger: TGAAAATGGCAATAAATACTGCCTCACAGTCCAAGCCAAAGACAAAGGTGATGCAACTGCCTCCTTAGTGGTCTGGGTGGATATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp TGGCTGGGTCTCATCACTGATGCTCGTCACATAGGTTaGTGGGTTAAACACAGGATGATTATCATTCACGTC +
Preference number: 6 (lower is better)
Translates to: WLGLITDARHIG*WVKHRMIIIHV
Trigger: GACGTGAATGATAATCATCCTGTGTTTAACCCATCAACCTATGTGACGAGCATCAGTGATGAGACCCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS TCA 72 bp CACACGGACTACAAGTGCTCCCTCTGTGTAGTGCACTaGATCAGAAATTTGGATGAGCAGCTCATATTCAGT +
Preference number: 6 (lower is better)
Translates to: HTDYKCSLCVVH*IRNLDEQLIFS
Trigger: ACTGAATATGAGCTGCTCATCCAAATTTCTGATTCAGTGCACTACACAGAGGGAGCACTTGTAGTCCGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 72 bp GTCCTGGCTGGAATGCCCTGGTCTGTAACTTTTAACTaGAGCCAGATAGGGAAGTATTCTGAAGATGGATTT +
Preference number: 6 (lower is better)
Translates to: VLAGMPWSVTFN*SQIGKYSEDGF
Trigger: AAATCCATCTTCAGAATACTTCCCTATCTGGCTGCAGTTAAAAGTTACAGACCAGGGCATTCCAGCCAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp TTTCATCTTCAACAGTGCAGAGGATTGTTGTGGTGCTaGACAATGAAGGGAATCCCCCATCTCGTACTAGTA +
Preference number: 6 (lower is better)
Translates to: FHLQQCRGLLWC*TMKGIPHLVLV
Trigger: TACTAGTACGAGATGGGGGATTCCCTTCATTGTCCAGCACCACAACAATCCTCTGCACTGTTGAAGATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp GCCTCACAATTTTCAGTCACGAGCCCTTTATACAGGTaGTGGCTGAAGGAAATCTTTACATCTTCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: ASQFSVTSPLYR*WLKEIFTSSPS
Trigger: GGAAGGAGAAGATGTAAAGATTTCCTTCAGCCACCACCTGTATAAAGGGCTCGTGACTGAAAATTGTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp ACACCACTCAGTGCATCAATCTGGAATGCTTCTTCTTaGTTGCCAGACAGAATAGAATACTCAATCAGGCCG +
Preference number: 6 (lower is better)
Translates to: TPLSASIWNASS*LPDRIEYSIRP
Trigger: CGGCCTGATTGAGTATTCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCAGATTGATGCACTGAGTGGTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 72 bp TTCCGCCGAGATCACCAGAAGAAATCCTGTAAAAGATaGGTTCTGAGGAGTTCAAGGGCTCTCTTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: FRRDHQKKSCKR*VLRSSRALLLS
Trigger: TGAAAGCAAGAGAGCCCTTGAACTCCTCAGAACCAATCTTTTACAGGATTTCTTCTGGTGATCTCGGCGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000504580.1
ENST00000507542.2
ENST00000623607.4
ENST00000638365.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640742.1
CDS CAA 72 bp CCACTCAGTGCATCAATCTGGAATGCTTCTTCTTGGTaGCCAGACAGAATAGAATACTCAATCAGGCCGTTC +
Preference number: 6 (lower is better)
Translates to: PLSASIWNASSW*PDRIEYSIRPF
Trigger: GAACGGCCTGATTGAGTATTCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCAGATTGATGCACTGAGTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 72 bp CACACCACTCAGTGCATCAATCTGGAATGCTTCTTCTaGGTTGCCAGACAGAATAGAATACTCAATCAGGCC +
Preference number: 6 (lower is better)
Translates to: HTTQCINLECFF*VARQNRILNQA
Trigger: GGCCTGATTGAGTATTCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCAGATTGATGCACTGAGTGGTGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 72 bp AGTTGTCTTTTCCATCATGATCAGAGGTCGTCTGAGTaGAAAGAGCTGCACACCTTACTTCCTGATCACCTG +
Preference number: 6 (lower is better)
Translates to: SCLFHHDQRSSE*KELHTLLPDHL
Trigger: CAGGTGATCAGGAAGTAAGGTGTGCAGCTCTTTCAACTCAGACGACCTCTGATCATGATGGAAAAGACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 90 bp GAATCCGTCCTCGGGGATCCAAGCAAACACTCTAAAATTATATGTTaGGGTGGATTCATAGTCAAACTGTCGCCGCAAATAAATCCAGCC +
Preference number: 6 (lower is better)
Translates to: ESVLGDPSKHSKIIC*GGFIVKLSPQINPA
Trigger: GGCTGGATTTATTTGCGGCGACAGTTTGACTATGAATCCACCCAAACATATAATTTTAGAGTGTTTGCTTGGATCCCCGAGGACGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CAA 90 bp GTCATTCTCATCCCAGACACGAACAATGACTGTAGTGCTCACATTTaGCAAGAATCCGTCCTCGGGGATCCAAGCAAACACTCTAAAATT +
Preference number: 6 (lower is better)
Translates to: VILIPDTNNDCSAHI*QESVLGDPSKHSKI
Trigger: AATTTTAGAGTGTTTGCTTGGATCCCCGAGGACGGATTCTTGCAAAATGTGAGCACTACAGTCATTGTTCGTGTCTGGGATGAGAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CAA 90 bp GTTATCACACCACTCAGTGCATCAATCTGGAATGCTTCTTCTTGGTaGCCAGACAGAATAGAATACTCAATCAGGCCGTTCAAACCACTG +
Preference number: 6 (lower is better)
Translates to: VITPLSASIWNASSW*PDRIEYSIRPFKPL
Trigger: CAGTGGTTTGAACGGCCTGATTGAGTATTCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCAGATTGATGCACTGAGTGGTGTGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp AGGATCGCAGAAAAATCCAGGAGCCTCTTCAGTGTCTaGGCCAGAGAAGAAAAGACTTTGTTTGGCAAACAA +
Preference number: 6 (lower is better)
Translates to: RIAEKSRSLFSV*AREEKTLFGKQ
Trigger: TTGTTTGCCAAACAAAGTCTTTTCTTCTCTGGCTCAGACACTGAAGAGGCTCCTGGATTTTTCTGCGATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000639062.3
ENST00000639512.1
CDS TCA 72 bp TTTGCAGCATTTGTGTCATCGGTGAGAGAGACTCACTaGCTTCCACTTGATAGACCAAATGTTCGAAAGTCC +
Preference number: 6 (lower is better)
Translates to: FAAFVSSVRETH*LPLDRPNVRKS
Trigger: GGACTTTCGAACATTTGGTCTATCAAGTGGAAGTCAGTGAGTCTCTCTCACCGATGACACAAATGCTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
CDS TCA 72 bp ATGAGCTCATCCTGGAAAGATGGGGAATGGTCATTCTaGTCTTCCACATCGATACTAAGGAAGACTGTGCTA +
Preference number: 6 (lower is better)
Translates to: MSSSWKDGEWSF*SSTSILRKTVL
Trigger: TAGCACAGTCTTCCTTAGTATCGATGTGGAAGATCAGAATGACCATTCCCCATCTTTCCAGGATGAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp ATTTACATCAAGAACAGTAACTGTCAAAGTCTGGGATaGAGAAAGTGCTGGTGTGCCATCATCCAGTGCCAG +
Preference number: 6 (lower is better)
Translates to: IYIKNSNCQSLG*RKCWCAIIQCQ
Trigger: CTGGCACTGGATGATGGCACACCAGCACTTTCTTCATCCCAGACTTTGACAGTTACTGTTCTTGATGTAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp CCATCTCGTACTAGTACTCGAAGGGTGAAGACTTCTTaGATTTCTCTGTCAAGTATGGTGGTTGTCACTACC +
Preference number: 6 (lower is better)
Translates to: PSRTSTRRVKTS*ISLSSMVVVTT
Trigger: GGTAGTGACAACCACCATACTTGACAGAGAAATTCAAGAAGTCTTCACCCTTCGAGTACTAGTACGAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp TTAGGCCTTTCAAACTCAGCAGGTGCCAGAGTTGTCTaGAAAATGTGTATGGTGACATCGGCATTAATGACA +
Preference number: 6 (lower is better)
Translates to: LGLSNSAGARVV*KMCMVTSALMT
Trigger: TGTCATTAATGCCGATGTCACCATACACATTTTCCAGACAACTCTGGCACCTGCTGAGTTTGAAAGGCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000507542.2
ENST00000623607.4
ENST00000624983.1
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
ENST00000640089.1
ENST00000640742.1
CDS CCA 72 bp CTCTACACTGATCACAATGAGCTCATCCTGGAAAGATaGGGAATGGTCATTCTGATCTTCCACATCGATACT +
Preference number: 6 (lower is better)
Translates to: LYTDHNELILER*GMVILIFHIDT
Trigger: AGTATCGATGTGGAAGATCAGAATGACCATTCCCCATCTTTCCAGGATGAGCTCATTGTGATCAGTGTAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp CATTCCAGTAACACTGTCACATACATAATGACATTTTaGTCAACAACGGCCCATGCACTTACGATGGTGGTC +
Preference number: 6 (lower is better)
Translates to: HSSNTVTYIMTF*STTAHALTMVV
Trigger: GACCACCATCGTAAGTGCATGGGCCGTTGTTGACCAAAATGTCATTATGTATGTGACAGTGTTACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504580.1
ENST00000638365.1
CDS CAA 72 bp TTGCTACATACCTTGCTGCAGCTTCTCCATCAGCACTaGCTGCTTCATCTTGCACTTTTAGGTAATGGAGAT +
Preference number: 6 (lower is better)
Translates to: LLHTLLQLLHQH*LLHLALLGNGD
Trigger: ATCTCCATTACCTAAAAGTGCAAGATGAAGCAGCAAGTGCTGATGGAGAAGCTGCAGCAAGGTATGTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS CAA 90 bp TCTTCGACTTTCAAAAACAACACATCATGCAAGAAGGTGGGGGAATaGTCATTCTCATCCCAGACACGAACAATGACTGTAGTGCTCACA +
Preference number: 6 (lower is better)
Translates to: SSTFKNNTSCKKVGE*SFSSQTRTMTVVLT
Trigger: TGTGAGCACTACAGTCATTGTTCGTGTCTGGGATGAGAATGACAATTCCCCCACCTTCTTGCATGATGTGTTGTTTTTGAAAGTCGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CAA 90 bp AATAGCTGTCCATTCTTTCCAGAGTCCATGTCAATAGCTGTAATTTaGCCTATTACCCCTTGGGGAACAGGGCTCTCTTCGACTTTCAAA +
Preference number: 6 (lower is better)
Translates to: NSCPFFPESMSIAVI*PITPWGTGLSSTFK
Trigger: TTTGAAAGTCGAAGAGAGCCCTGTTCCCCAAGGGGTAATAGGCAAAATTACAGCTATTGACATGGACTCTGGAAAGAATGGACAGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CAA 90 bp TGTTGTTATCACACCACTCAGTGCATCAATCTGGAATGCTTCTTCTaGGTTGCCAGACAGAATAGAATACTCAATCAGGCCGTTCAAACC +
Preference number: 6 (lower is better)
Translates to: CCYHTTQCINLECFF*VARQNRILNQAVQT
Trigger: GGTTTGAACGGCCTGATTGAGTATTCTATTCTGTCTGGCAACCAAGAAGAAGCATTCCAGATTGATGCACTGAGTGGTGTGATAACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp AGGCAGTTGCATCACCTTTGTCTTTGGCTTGGACTGTaGGGCAGTATTTATTGCCATTTTCATAGTCAAGGA +
Preference number: 6 (lower is better)
Translates to: RQLHHLCLWLGL*GSIYCHFHSQG
Trigger: TCCTTGACTATGAAAATGGCAATAAATACTGCCTCACAGTCCAAGCCAAAGACAAAGGTGATGCAACTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp CTAGGAATTTATCCTGCAGAGGTTCCTCTACAGGTGTaGAAAAGTCACACACGGCTATTTGCTCAAGTACTA +
Preference number: 6 (lower is better)
Translates to: LGIYPAEVPLQV*KSHTRLFAQVL
Trigger: TAGTACTTGAGCAAATAGCCGTGTGTGACTTTTTCACACCTGTAGAGGAACCTCTGCAGGATAAATTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624983.1
ENST00000640089.1
CDS GCA 72 bp AGGACGCATGATTGTATATTCTCCATCTACAGAGACTaGTGTGCAATGTCTTACTTTCTCCACTCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: RTHDCIFSIYRD*CAMSYFLHSPK
Trigger: CTTTGGAGAGTGGAGAAAGTAAGACATTGCACAGCAGTCTCTGTAGATGGAGAATATACAATCATGCGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000624983.1
ENST00000640089.1
CDS CCA 72 bp CTTCGACTTTCAAAAACAACACATCATGCAAGAAGGTaGGGGAATTGTCATTCTCATCCCAGACACGAACAA +
Preference number: 6 (lower is better)
Translates to: LRLSKTTHHARR*GNCHSHPRHEQ
Trigger: TTGTTCGTGTCTGGGATGAGAATGACAATTCCCCCACCTTCTTGCATGATGTGTTGTTTTTGAAAGTCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CCA 72 bp TCACAATTTTCAGTCACGAGCCCTTTATACAGGTGGTaGCTGAAGGAAATCTTTACATCTTCTCCTTCCATG +
Preference number: 6 (lower is better)
Translates to: SQFSVTSPLYRW*LKEIFTSSPSM
Trigger: CATGGAAGGAGAAGATGTAAAGATTTCCTTCAGCCACCACCTGTATAAAGGGCTCGTGACTGAAAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 90 bp CCTTCCACAGAACAGTGGCCACTGGAGTTTGAGTGTCTGTACAGATaGACAATATCCTTCTCCATGATACTTATTAAACTCAACCATTCC +
Preference number: 6 (lower is better)
Translates to: PSTEQWPLEFECLYR*TISFSMILIKLNHS
Trigger: GGAATGGTTGAGTTTAATAAGTATCATGGAGAAGGATATTGTCAATCTGTACAGACACTCAAACTCCAGTGGCCACTGTTCTGTGGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp CCTAATTCACAGAACAGAGACTTGAGAACAAAGGCTTaGAGTTCATCAGAACTGAATGCAAAGTCTGTCCCA +
Preference number: 6 (lower is better)
Translates to: PNSQNRDLRTKA*SSSELNAKSVP
Trigger: TGGGACAGACTTTGCATTCAGTTCTGATGAACTTCAAGCCTTTGTTCTCAAGTCTCTGTTCTGTGAATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS CCA 72 bp TCATCATTTACATCAAGAACAGTAACTGTCAAAGTCTaGGATGAAGAAAGTGCTGGTGTGCCATCATCCAGT +
Preference number: 6 (lower is better)
Translates to: SSFTSRTVTVKV*DEESAGVPSSS
Trigger: ACTGGATGATGGCACACCAGCACTTTCTTCATCCCAGACTTTGACAGTTACTGTTCTTGATGTAAATGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp TATACTTTTATAATTACAGTGGTGCTTCGTGAACCCTaGATGCTACAGTCTCTGGCCACAGCACTAAATGTA +
Preference number: 6 (lower is better)
Translates to: YTFIITVVLREP*MLQSLATALNV
Trigger: TACATTTAGTGCTGTGGCCAGAGACTGTAGCATCCAGGGTTCACGAAGCACCACTGTAATTATAAAAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 72 bp TTCAAAAACAACACATCATGCAAGAAGGTGGGGGAATaGTCATTCTCATCCCAGACACGAACAATGACTGTA +
Preference number: 6 (lower is better)
Translates to: FKNNTSCKKVGE*SFSSQTRTMTV
Trigger: TACAGTCATTGTTCGTGTCTGGGATGAGAATGACAATTCCCCCACCTTCTTGCATGATGTGTTGTTTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339452.2
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000639512.1
CDS CAA 72 bp GAAACAATGTTGGAAGAACAAAGAGCAAGCCACAGTTaGTGTTATCTCCCTTGTTTTGACTTGCGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: ETMLEEQRASHS*CYLPCFDLRGK
Trigger: CTTTCCACGCAAGTCAAAACAAGGGAGATAACACAAACTGTGGCTTGCTCTTTGTTCTTCCAACATTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624983.1
ENST00000640089.1
CDS CAA 90 bp TTGGACTGTGAGGCAGTATTTATTGCCATTTTCATAGTCAAGGATTaGCTTAGCATGAATATCCCCTGTCAAAGGGTCAATGAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: LDCEAVFIAIFIVKD*LSMNIPCQRVNEEE
Trigger: CTCTTCCTCATTGACCCTTTGACAGGGGATATTCATGCTAAGCAAATCCTTGACTATGAAAATGGCAATAAATACTGCCTCACAGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp AATAGGCAGATTTTCTGGAACAATACAGCTGAAGCTTaGGAACATAAACTGAGGTGCATGGTCGTTATCATC +
Preference number: 6 (lower is better)
Translates to: NRQIFWNNTAEA*EHKLRCMVVII
Trigger: GATGATAACGACCATGCACCTCAGTTTATGTTCTCAAGCTTCAGCTGTATTGTTCCAGAAAATCTGCCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp GAATATTCAACATATGTGTTTTCACGGGTCCAGTCATaGTCGATGTTTGAAAATGTAACAAGCGTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: EYSTYVFSRVQS*SMFENVTSVLP
Trigger: TGGAAGCACGCTTGTTACATTTTCAAACATCGACCATGACTGGACCCGTGAAAACACATATGTTGAATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp AATAATTCAAATGAAGCACCTGGCATGATTTCAAACTaGAGCTTGGAATTGACTCCTGAATCTCTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: NNSNEAPGMISN*SLELTPESLSR
Trigger: TCTGGACAGAGATTCAGGAGTCAATTCCAAGCTTCAGTTTGAAATCATGCCAGGTGCTTCATTTGAATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp ATGATCATAAGACATTCCATGAGTGAGAAAACAGGGTaGTACAATAGAATAGGTCAATTCTCCATACGGACC +
Preference number: 6 (lower is better)
Translates to: MIIRHSMSEKTG*YNRIGQFSIRT
Trigger: GGTCCGTATGGAGAATTGACCTATTCTATTGTATCACCCTGTTTTCTCACTCATGGAATGTCTTATGATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS GCA 72 bp TGTAGAGTTGGCTTTCAGACACTGATGCCTGGTAAATaGTTTGTTCAAAGCATGGTGAATTATCATTCTCAT +
Preference number: 6 (lower is better)
Translates to: CRVGFQTLMPGK*FVQSMVNYHSH
Trigger: ATGAGAATGATAATTCACCATGCTTTGAACAAAGCATTTACCAGGCATCAGTGTCTGAAAGCCAACTCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357232.10
ENST00000623568.1
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
ENST00000640328.1
CDS TCA 72 bp ATAATCAAGTTCCTTAGAAAGAAACAAGTCTCCGGTTaGGCTGTCTATTTCAAAGTGTCCATCCTTATCATC +
Preference number: 6 (lower is better)
Translates to: IIKFLRKKQVSG*AVYFKVSILII
Trigger: GATGATAAGGATGGACACTTTGAAATAGACAGCTCAACCGGAGACTTGTTTCTTTCTAAGGAACTTGATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp ATGGATCACATATACTATGATGGTTCCGTAAGATTCTaGCACCGTATTTTATTGTACCTTTTCTGTGCTCAC +
Preference number: 6 (lower is better)
Translates to: MDHIYYDGSVRF*HRILLYLFCAH
Trigger: GTGAGCACAGAAAAGGTACAATAAAATACGGTGTCAGAATCTTACGGAACCATCATAGTATATGTGATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000624983.1
ENST00000640089.1
CDS GCA 72 bp TTCCATCAATTATGTGATATTCAACAGCTCTGTTATTaGCAGCATCCATATCAGAGGCTAAAACCGTATAGA +
Preference number: 6 (lower is better)
Translates to: FHQLCDIQQLCY*QHPYQRLKPYR
Trigger: TCTATACGGTTTTAGCCTCTGATATGGATGCTGGCAATAACAGAGCTGTTGAATATCACATAATTGATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CCA 72 bp TTCTGTAGGAAGGTCTATAATCATACGAAAGTATTGTaGTTGTTCTTATTTCACCATTGTTGGCGTCAATCT +
Preference number: 6 (lower is better)
Translates to: FCRKVYNHTKVL*LFLFHHCWRQS
Trigger: AGATTGACGCCAACAATGGTGAAATAAGAACAACCACAATACTTTCGTATGATTATAGACCTTCCTACAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 72 bp TCATTCTGTAGGAAGGTCTATAATCATACGAAAGTATaGTGGTTGTTCTTATTTCACCATTGTTGGCGTCAA +
Preference number: 6 (lower is better)
Translates to: SFCRKVYNHTKV*WLFLFHHCWRQ
Trigger: TTGACGCCAACAATGGTGAAATAAGAACAACCACAATACTTTCGTATGATTATAGACCTTCCTACAGAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS CAA 72 bp AGAGGTAAAAACATCTCTAAACTGTTCATTACTTCCTaGTCTGCTGAAAAGTTGACAGCACTCAGAATTTCT +
Preference number: 6 (lower is better)
Translates to: RGKNISKLFITS*SAEKLTALRIS
Trigger: AGAAATTCTGAGTGCTGTCAACTTTTCAGCAGACAAGGAAGTAATGAACAGTTTAGAGATGTTTTTACCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000623607.4
ENST00000638949.2
CDS TCA 72 bp ATTCACAAAAACAGTGCAAGATGCAAACTTGGAATCTaGTTTGGGACTATGAGCGATTATTTTCATTTCCAA +
Preference number: 6 (lower is better)
Translates to: IHKNSARCKLGI*FGTMSDYFHFQ
Trigger: TTGGAAATGAAAATAATCGCTCATAGTCCCAAATCAGATTCCAAGTTTGCATCTTGCACTGTTTTTGTGAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357232.10
ENST00000623607.4
ENST00000638949.2
ENST00000639062.3
CDS TCA 72 bp AATGACACTTCAGTCAATGATGGATCACATATACTATaGTGGTTCCGTAAGATTCTGACACCGTATTTTATT +
Preference number: 6 (lower is better)
Translates to: NDTSVNDGSHIL*WFRKILTPYFI
Trigger: AATAAAATACGGTGTCAGAATCTTACGGAACCATCATAGTATATGTGATCCATCATTGACTGAAGTGTCATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000624983.1
ENST00000640089.1