RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCHS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166341

Ensembl transcript IDs: ENST00000299441.5, ENST00000680123.1

Found 734 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCTGGTGCAGGGCAGGGATCCCTCACTGAGGAGAACCCAGGGCTaGTACCTCCTTCATATTTCTCCCCACATTGGACCTGGTCACAGG +
Preference number: 1 (lower is better)
Translates to: VLVQGRDPSLRRTQG*YLLHISPHIGPGHR
Trigger: CCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCTGCCCTGCACCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
3UTR-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGCTCAGAGTGGGGCCTaGGTTGGGGACACTGTGCGC +
Preference number: 2 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLAQSGA*VGDTVR
Trigger: GCGCACAGTGTCCCCAACGCAGGCCCCACTCTGAGC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
3UTR-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGCTGGGGCCTGGTGGTaGCCTCCCCGTAGCCAGTCA +
Preference number: 2 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAAGAWW*PPRSQS
Trigger: TGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000299441.5
3UTR-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTTGGAGAGCTGGGGCCTaGTGGTGGCCTCCCCGTAGC +
Preference number: 2 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGWRAGA*WWPPRS
Trigger: GCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCA...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000299441.5
3UTR-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGAGTGGGGCCTGCGTTaGGGACACTGTGCGCATCCC +
Preference number: 2 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGEWGLR*GHCAHP
Trigger: GGGATGCGCACAGTGTCCCCAACGCAGGCCCCACTC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
3UTR-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTTCAGGGTGGAGAGCTaGGGCCTGGTGGTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAFRVES*GLVVAS
Trigger: GGAGGCCACCACCAGGCCCCAGCTCTCCACCCTGAA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
3UTR-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTCTGGGGAGTTCAGGGTaGAGAGCTGGGGCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: SSIPLPPINKVSAPSQGALGSSG*RAGAWW
Trigger: CCACCAGGCCCCAGCTCTCCACCCTGAACTCCCCAG...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000299441.5
3UTR-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGTCATAGTCCGAGGCTaGCCAGGGCAGGCTCAGAGT +
Preference number: 2 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAVIVRG*PGQAQS
Trigger: ACTCTGAGCCTGCCCTGGGCAGCCTCGGACTATGAC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
3UTR-3UTR CAA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGAGAGTGGGGCCTGCGTaGGGGACACTGTGCGCATCC +
Preference number: 3 (lower is better)
Translates to: GGELGPGGGLPVASHSPRRVGPA*GTLCAS
Trigger: GGATGCGCACAGTGTCCCCAACGCAGGCCCCACTCT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299441.5
3UTR-3UTR CAA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTATATTTCTCCCCACATaGGACCTGGTCACAGGTCAG +
Preference number: 3 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGIFLPT*DLVTGQ
Trigger: CTGACCTGTGACCAGGTCCAATGTGGGGAGAAATAT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGTGGCTGGTGCGTGGTaGGGAGCCCCCATCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRVAGAW*GAPIPG
Trigger: GCCCGGGATGGGGGCTCCCCACCACGCACCAGCCAC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCGCGGCGGGGAGCCGTaGTCTGAGGCCACCACTGTC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRRGGEP*SEATTV
Trigger: GACAGTGGTGGCCTCAGACCACGGCTCCCCGCCGCG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTGGTGGGGTCCACGGTaGAGGCTCCACCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRWWGPR*RLHHPQ
Trigger: CTGGGGGTGGTGGAGCCTTCACCGTGGACCCCACCA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCACACCCGCGGGCTCTaGCGCTGCCACCGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRHTRGL*RCHRAQ
Trigger: TTGGGCTCGGTGGCAGCGCCAGAGCCCGCGGGTGTG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCGGCCTGGAGCCCCGTaGTCTCGTGCTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRRPGAP*SRASST
Trigger: GGTGCTGGAAGCACGAGACCACGGGGCTCCAGGCCG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGCTGCACGTGCACTGTaGCTCGTGCTGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRAARAL*LVLPGL
Trigger: CAGGCCGGGCAGCACGAGCCACAGTGCACGTGCAGC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCCCCACCCCCAGAGGTaGCTGTTCCGCTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRPHPQR*LFRCLV
Trigger: CACCAGGCAGCGGAACAGCCACCTCTGGGGGTGGGG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTGGAGAGCTGGGGCCTaGTGGTGGCCTCCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRWRAGA*WWPPRS
Trigger: GCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCAGCGCTCCAGTGCTTaGGTGCAGCCGGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRQRSSA*VQPEVA
Trigger: GGCCACTTCCGGCTGCACTCAAGCACTGGAGCGCTG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCATCCAGCGCGAAGGTaGCCTCGGGATCGGCACCGC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRHPARR*PRDRHR
Trigger: GCGGTGCCGATCCCGAGGGCACCTTCGCGCTGGATG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCAGCAGCAGGGTCCCTaGAGGCACATCCTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRQQQGP*RHILRH
Trigger: GTGCCGGAGGATGTGCCTGCAGGGACCCTGCTGCTG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGAAAGTGGCTGGTGCGTaGTGGGGAGCCCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRKVAGA*WGAPIP
Trigger: CGGGATGGGGGCTCCCCACCACGCACCAGCCACTTT...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGTGGCGGGCCGGTCGGTaGCTTCCACCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRWRAGR*LPPAAA
Trigger: TGCTGCTGCTGGTGGAAGCCACCGACCGGCCCGCCA...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCGTGGCACTGAGAGCTaGCTGGCCTCCATCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRRGTES*LASIPG
Trigger: GCCCGGGATGGAGGCCAGCCAGCTCTCAGTGCCACG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGGTCGGGGCCCAGCCTaGGCCACAGCTAGATGTGCA +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRGRGPA*ATARCA
Trigger: TGCACATCTAGCTGTGGCCCAGGCTGGGCCCCGACC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCACCGTCAAGGTAGCTaGGCCCACCAGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRHRQGS*AHQGWA
Trigger: AGCCCAGCCCTGGTGGGCTCAGCTACCTTGACGGTG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGATCCTGCTGGATGCCTaGGTCAGGGCCACGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRILLDA*VRATGS
Trigger: GCTGCCCGTGGCCCTGACTCAGGCATCCAGCAGGAT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGGGGGCACTCCACTaGCTGCTCGCACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRLGALH*LLAPPA
Trigger: AGCTGGAGGTGCGAGCAGGCAGTGGAGTGCCCCCAG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCACGTCGGGGTCGGTTaGTCGCAGGGTGAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRHVGVG*SQGEQR
Trigger: TCTCTGCTCACCCTGCGAGCAACCGACCCCGACGTG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGAGCTTTGGGGTGGCTaGCCACGGTCAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRELWGG*PRSAAA
Trigger: GGCTGCAGCTGACCGTGGGCAGCCACCCCAAAGCTC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGCTCAGAGTGGGGCCTaGGTTGGGGACACTGTGCGC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRAQSGA*VGDTVR
Trigger: GCGCACAGTGTCCCCAACGCAGGCCCCACTCTGAGC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCTCCAGGCCAGGCTCTaGGCCCAGCTTGACCTCAGA +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRLQARL*AQLDLR
Trigger: TCTGAGGTCAAGCTGGGCCCAGAGCCTGGCCTGGAG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGTAGTCGAAAGTGGCTaGTGCGTGGTGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRVVESG*CVVGSP
Trigger: GGGGCTCCCCACCACGCACCAGCCACTTTCGACTAC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGTGCTCAGAGGGTGGTaGACTAGGTGGCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRVLRGW*TRWLPA
Trigger: GGCCGGGAGCCACCTAGTCCACCACCCTCTGAGCAC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGAGGTGCTCAGAGGGTaGTGGACTAGGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPREVLRG*WTRWLP
Trigger: CGGGAGCCACCTAGTCCACCACCCTCTGAGCACCTC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCCTCGCCGGCCACAATaGCTGTCAGCGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRPRRPQ*LSAHLP
Trigger: TGGCAGGTGCGCTGACAGCCATTGTGGCCGGCGAGG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCCTGCAAGACAGGACTaGCAGGGGCCAGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRPARQD*QGPGSQ
Trigger: CTGAGAGCCTGGCCCCTGGCAGTCCTGTCTTGCAGG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCCCGCACTACAAAGCTaGCAGGCAGCGCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRPALQS*QAAQPQ
Trigger: CTGAGGTTGCGCTGCCTGGCAGCTTTGTAGTGCGGG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGGGCACTCCACTGCCTaGTCGCACCTCCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRGHSTA*SHLQLQ
Trigger: TTGGAGCTGGAGGTGCGAGCAGGCAGTGGAGTGCCC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGTCGAAAGTGGCTGGTaGGTGGTGGGGAGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRVESGW*VVGSPH
Trigger: ATGGGGGCTCCCCACCACGCACCAGCCACTTTCGAC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGATAGTGGGGCCGCTCTaGTCGGATCAGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRIVGPL*SDQGSC
Trigger: GCAGCTCCCCTGATCCGAGCAGAGCGGCCCCACTAT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCCGCAGTCCCTCAGCTaGTGTCACCGTCAGCACGAC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRPQSLS*CHRQHD
Trigger: GTCGTGCTGACGGTGACAGCAGCTGAGGGACTGCGG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTGCCAGGAGGTGGTGTaGCTGCCAGCCGGTACAGAA +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRCQEVV*LPAGTE
Trigger: TTCTGTACCGGCTGGCAGGCACACCACCTCCTGGCA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGGCTCCTCCACTCTCTaGCTGCAGCACCAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRGSSTL*LQHQSQ
Trigger: CTGCGACTGGTGCTGCAGGCAGAGAGTGGAGGAGCC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGAGGTGGCTGTTCCGCTaGCTGGTGCCCGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRRWLFR*LVPDCP
Trigger: TGGACAGTCGGGCACCAGGCAGCGGAACAGCCACCT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGATAGTCCCCAGTGGGTaGAGGGCTCAGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRIVPSG*RAQATA
Trigger: GGCTGTGGCCTGAGCCCTGCACCCACTGGGGACTAT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTGTCCACTCGGGCACTaGGTTCTGCCTGTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRCPLGH*VLPVGH
Trigger: GTGGCCTACAGGCAGAACCCAGTGCCCGAGTGGACA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTCTCCAGTCTGGGGGTaGATGCGGAAGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRSPVWG*MRKALL
Trigger: CAGCAAGGCCTTCCGCATCCACCCCCAGACTGGAGA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCGGAGGCACGCGGTCTaGTACCTGTATAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRRRHAV*YLYREA
Trigger: GGCCTCCCTATACAGGTACCAGACCGCGTGCCTCCG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGAGCCATAGTCCCCAGTaGGTGCAGGGCTCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRSHSPQ*VQGSGH
Trigger: GTGGCCTGAGCCCTGCACCCACTGGGGACTATGGCT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGTGTCCTCCAGAGCCTTaGTCCAGGTCATCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRCPPEP*SRSSAS
Trigger: GGAGGCGGATGACCTGGATCAAGGCTCTGGAGGACA...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGCCGAGCGATCTCTGTaGAGACACTGGCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRAERSL*RHWPVV
Trigger: AACCACTGGCCAGTGTCTTCACAGAGATCGCTCGGC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGCCCCGATCTCCAGCTaGACCACAGAATTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRAPISS*TTELAR
Trigger: ACGGGCCAATTCTGTGGTGCAGCTGGAGATCGGGGC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGTGGCTGTGCCTGTCTaGTGCCCCAACTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRVAVPV*CPNSAL
Trigger: CAAAGCTGAGTTGGGGCAGCAGACAGGCACAGCCAC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTTCTGGTCCTGCAGCTaGACGTGCACTGTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRFWSCS*TCTVAR
Trigger: ACGAGCCACAGTGCACGTGCAGCTGCAGGACCAGAA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGCTGTTCAGTGCAAATaGCTCACGGCCCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRAVQCK*LTALRS
Trigger: GGACCTGAGGGCCGTGAGGCATTTGCACTGAACAGC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGTCATAGTCCGAGGCTaGCCAGGGCAGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRVIVRG*PGQAQS
Trigger: ACTCTGAGCCTGCCCTGGGCAGCCTCGGACTATGAC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCCGTGTGTGCGTCGATaGAGAAGGGTCCATCACCCT +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRPCVRR*RRVHHP
Trigger: AGGGTGATGGACCCTTCTCCATCGACGCACACACGG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGTGCTTAGGGCAAAGTaGCCCTCTCCACCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRVLRAK*PSPPSR
Trigger: CCTGGAAGGTGGAGAGGGCCACTTTGCCCTAAGCAC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGATAGGGCCCCCATCTaGTGCTTGGGCCTGCACTTG +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRDRAPI*CLGLHL
Trigger: CAAGTGCAGGCCCAAGCACCAGATGGGGGCCCTATC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGTGGTTGGGTCTACGTaGAACAATCCACGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRVVGST*NNPRAG
Trigger: GCCGGCACGTGGATTGTTCCACGTAGACCCAACCAC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCCCAGGGTTGGGGGATaGTGGGGCGATTGTCATTGG +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRPRVGG*WGDCHW
Trigger: CCAATGACAATCGCCCCACCATCCCCCAACCCTGGG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGGTCACGAGAGTGCCTaGAGGCTGATTCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRGHESA*RLILGH
Trigger: GTGGCCGAGAATCAGCCTCCAGGCACTCTCGTGACC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGGTGCCCTCAGGCAGTaGGGCATTGTAGAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRGALRQ*GIVESP
Trigger: AGGACTTTCTACAATGCCTCACTGCCTGAGGGCACC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCCTGCAGTCCAACAATaGTCACACCAGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRPAVQQ*SHQWQS
Trigger: GCTCTGCCACTGGTGTGATCATTGTTGGACTGCAGG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGTCAGGGTCAGCACAGTaGAGGCAAAGGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRSGSAQ*RQRLLH
Trigger: GTGGAGGAGCCTTTGCCTTCACTGTGCTGACCCTGA...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCCACAGCACGGGTCCTaGGTCCACATCATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRPQHGS*VHIIPC
Trigger: ACAGGGAATGATGTGGACTCAGGACCCGTGCTGTGG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCAGTCTGGGGGTGGATaGGGAAGGCCTTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRQSGGG*GRPCCL
Trigger: AAGACAGCAAGGCCTTCCGCATCCACCCCCAGACTG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTGCTCATTCTCGTCCTaGACTTGCACCTGCACTCGC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRCSFSS*TCTCTR
Trigger: GCGAGTGCAGGTGCAAGTGCAGGACGAGAATGAGCA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTCTAGGATGCGGTACTaGAACTGCCCATTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRSRMRY*NCPLAP
Trigger: GGGAGCCAATGGGCAGTTGCAGTACCGCATCCTAGA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGAGTCCCAGTTATAGCTaGCACGGAGCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRSPSYS*HGAPPR
Trigger: GCGAGGAGGAGCTCCGTGGCAGCTATAACTGGGACT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGACGCCGCTGCCCTCTTaGGCAGAGATGAAGTACATG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRTPLPS*AEMKYM
Trigger: CATGTACTTCATCTCTGCCCAAGAGGGCAGCGGCGT...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCACACATCACCGCTGTaGGCATCAATGCGGAATGGG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRHTSPL*ASMRNG
Trigger: CCCATTCCGCATTGATGCCCACAGCGGTGATGTGTG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGGGGAGCATTGTCGTTaGCATCTTGCAGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRGEHCR*HLAGSG
Trigger: CCCTGACCCTGCAAGATGCCAACGACAATGCTCCCC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGAGGGTTGGGGGATGGTaGGGCGATTGTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRRVGGW*GDCHWC
Trigger: ACACCAATGACAATCGCCCCACCATCCCCCAACCCT...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCAGCCACTCGAACAGTaGCATGCGTTAACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRQPLEQ*HALTEE
Trigger: CTCCTCAGTTAACGCATGTCACTGTTCGAGTGGCTG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGTCAGATGCGAACACCTaGAAGACAGGACTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRSDANT*KTGLPG
Trigger: CCCTGGCAGTCCTGTCTTGCAGGTGTTCGCATCTGA...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGGATGCGGAAGGCCTTaGTGTCTTCAGACAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRGCGRP*CLQTAV
Trigger: AACAGCTGTCTGAAGACAGCAAGGCCTTCCGCATCC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTCTGGATCCTTCGCCTaGAGAGTCGTCACCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRSGSFA*RVVTSV
Trigger: AACACTGGTGACGACTCTGCAGGCGAAGGATCCAGA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACGCTGGGTCCCGCTCTaGGAGATCTGGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRWVPL*EIWGRL
Trigger: GAGCCGCCCCCAGATCTCGCAGAGCGGGACCCAGCG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGATGCGGTACTGCAACTaGCCATTGGCTCCCACATCT +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRMRYCN*PLAPTS
Trigger: AGATGTGGGAGCCAATGGGCAGTTGCAGTACCGCAT...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGTCCCCGTCGATTGCATaGAGAGTGGTCACGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRSPSIA*RVVTRV
Trigger: CACTCTCGTGACCACTCTGCATGCAATCGACGGGGA...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGATCCAAGGTAAAAAGTaGGGGGCTGTTGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRIQGKK*GAVASQ
Trigger: CTGGCTGGCAACAGCCCCCCACTTTTTACCTTGGAT...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCAAATATGGGTGGTGTaGGGGTTCCAGGCACAATGC +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRQIWVV*GFQAQC
Trigger: GCATTGTGCCTGGAACCCCCACACCACCCATATTTG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTGTCTAGTGGCCGCATaGTGCCAAACTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRCLVAA*CQTLQK
Trigger: CTTCTGGAGAGTTTGGCACCATGCGGCCACTAGACA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACAGTGCCCGGGGGCCTaGTCCAGCACTCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLQCPGA*SSTLPS
Trigger: GCTGGGGAGAGTGCTGGACCAGGCCCCCGGGCACTG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCGATTGCATGCAGAGTaGTCACGAGAGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRRLHAE*SRECLE
Trigger: CTCCAGGCACTCTCGTGACCACTCTGCATGCAATCG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCTCCAGAGTGAGAAATaGCACTTGGTTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRLQSEK*HLVLGR
Trigger: CCTGCCCAGAACCAAGTGCCATTTCTCACTCTGGAG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGACCATCATCTGGGTCTaGCACAGAGATGCGAGCAAC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRTIIWV*HRDASN
Trigger: GTTGCTCGCATCTCTGTGTCAGACCCAGATGATGGT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCGTAGTGATAATGCCTaGGGTGGGGTCAATGGAGAA +
Preference number: 4 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRRSDNA*GGVNGE
Trigger: TTCTCCATTGACCCCACCTCAGGCATTATCACTACG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGACGAAGACGCGCGCTaGAACGCGCGCTGCACGACG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLDEDAR*NARCTT
Trigger: CGTCGTGCAGCGCGCGTTTCAGCGCGCGTCTTCGTC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGACGCAACTCCCCTGTTaGGCTGTTCAGTGCAAATGC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRTQLPC*AVQCKC
Trigger: GCATTTGCACTGAACAGCTCAACAGGGGAGTTGCGT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACACGACAGGCACTGGTaGCGCTGGGTCCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLHDRHW*RWVPLC
Trigger: GCAGAGCGGGACCCAGCGGCACCAGTGCCTGTCGTG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGTTGCTCAAATATGGGTaGTGTGGGGGTTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRLLKYG*CGGSRH
Trigger: GTGCCTGGAACCCCCACACCACCCATATTTGAGCAA...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGCCCACGCTGGTCCCTaGGGGCTGGTTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLAHAGP*GLVLSH
Trigger: GTGGCTGAGAACCAGCCCCCAGGGACCAGCGTGGGC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCCGCTCTGCGAGATCTaGGGGCGGCTCGGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPPLCEI*GRLGQA
Trigger: CGCTTGGCCGAGCCGCCCCCAGATCTCGCAGAGCGG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGCCTCTATCCTCAGCTaGAAAGCTGGCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRASILS*KAGSTS
Trigger: AGAAGTGGAGCCAGCTTTCCAGCTGAGGATAGAGGC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGCTGGGGCCTGGTGGTaGCCTCCCCGTAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLAGAWW*PPRSQS
Trigger: TGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCACACACCAGATAGATaGCGCTGTCTTGGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRHTPDR*RCLGCL
Trigger: TAAGCACCCAAGACAGCGTCATCTATCTGGTGTGTG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACCACCAGTGTGTAGGTaGGTGCACCCACACCCGCGG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLPPVCR*VHPHPR
Trigger: CCGCGGGTGTGGGTGCACTCACCTACACACTGGTGG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCATACACTGTCAGGTTaGTCTCCTCCTGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRHTLSG*SPPVPL
Trigger: GAGAGGAACAGGAGGAGATCAACCTGACAGTGTATG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGGAGCTGCCGTGCCTaGCGGAAGCCCCGCACTGAT +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRSCRA*RKPRTD
Trigger: ATCAGTGCGGGGCTTCCGGCAGGCACGGCAGCTCCT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACAGTGCCTGTGGTGCTaGGGGGTGGGCTCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLQCLWC*GVGSLH
Trigger: ATGGAGGGAGCCCACCCCGCAGCACCACAGGCACTG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCTGACGGTCAGGACCTaGGTGGCCGAGCGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGLTVRT*VAERGG
Trigger: CCCGCCGCGCTCGGCCACGCAGGTCCTGACCGTCAG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATCATCCGCCTCCACCTaGAGCAGGGGCCCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSSAST*SRGPSK
Trigger: CTTGGAGGGGCCCCTGCTGCAGGTGGAGGCGGATGA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCACTGTGGCTCGTGCTaGCCGGCCTGGAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGHCGSC*PAWSPV
Trigger: CACGGGGCTCCAGGCCGGGCAGCACGAGCCACAGTG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATGTTCCGCTGCCTGGTaGCCGACTGTCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLCSAAW*PTVHPQ
Trigger: CTGCGGGTGGACAGTCGGGCACCAGGCAGCGGAACA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACCTCAGCTCCCGTGGTaGTTCCCGCCGGGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAPQLPW*FPPGPA
Trigger: GGCCGGACCCGGCGGGAAGCACCACGGGAGCTGAGG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTCGGTCCGCGCGCCCTTaGCCGTCGATCGGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGARSARP*PSIGPS
Trigger: GGACGGACCGATCGACGGCCAAGGGCGCGCGGACCG...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGACTCGGCCCACGCTaGTCCCTGGGGGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRLGPR*SLGAGS
Trigger: AGAACCAGCCCCCAGGGACCAGCGTGGGCCGAGTCT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGGCTCCGGGTTCTCTaGCAGCGCCAGCGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGLRVL*QRQRQR
Trigger: CCGCTGGCGCTGGCGCTGCCAGAGAACCCGGAGCCC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGACGGCGGCTGGCGTTaGCGGGCCGGTCGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGADGGWR*RAGRWL
Trigger: AAGCCACCGACCGGCCCGCCAACGCCAGCCGCCGTC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGAGTGCAGCCGGAAGTaGCCGTCCCCGCCAGATGCC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPECSRK*PSPPDA
Trigger: GGCATCTGGCGGGGACGGCCACTTCCGGCTGCACTC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAAGTCACTTGCCCGTTaGCCCCCACGTCGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLKSLAR*PPRRGR
Trigger: CCGACCCCGACGTGGGGGCCAACGGGCAAGTGACTT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTCGTGCTGCCCGGCCTaGAGCCCCGTGGTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGSCCPA*SPVVSC
Trigger: GCACGAGACCACGGGGCTCCAGGCCGGGCAGCACGA...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATCCAGCAGTGGTGCCTaGGGGCAGGTCCACACGGTA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSSSGA*GQVHTV
Trigger: TACCGTGTGGACCTGCCCTCAGGCACCACTGCTGGA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTGGGAGGCGCACGCGTaGCGGCGAGGCGAAGACAGG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAWEAHA*RRGEDR
Trigger: CCTGTCTTCGCCTCGCCGTCACGCGTGCGCCTCCCA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAAACGCACGAGGCCATaGGGGCCAGGGTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLKRTRP*GPGSAS
Trigger: TGACGCTGACCCTGGCCCTCATGGCCTCGTGCGTTT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGAGTGCCTGGAGGCTaGTTCTCGGCCACGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRVPGG*FSATLV
Trigger: CACCAGCGTGGCCGAGAATCAGCCTCCAGGCACTCT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATCATGGACCCGCCGCTaGTCAAAGTCCAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSWTRR*SKSSGR
Trigger: GCGGCCACTGGACTTTGAGCAGCGGCGGGTCCATGA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGGGCCCCCATCTGGTaGTTGGGCCTGCACTTGCAG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRAPIW*LGLHLQ
Trigger: CTGCAAGTGCAGGCCCAAGCACCAGATGGGGGCCCT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACCCTCACGGTGGCTGTaGCTGTCTGCTGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLPSRWL*LSAAPT
Trigger: AGTTGGGGCAGCAGACAGGCACAGCCACCGTGAGGG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGCACAGTGCCTGTGGTaGTGCGGGGTGGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGAQCLW*CGVGSL
Trigger: GAGGGAGCCCACCCCGCAGCACCACAGGCACTGTGC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGAAAGTGTACAGCGCTaGGCCGGGCTCCGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLESVQR*AGLRVL
Trigger: GAGAACCCGGAGCCCGGCGCAGCGCTGTACACTTTC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGACTCCCAAAGGTTGGTaGATGGTCATTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRTPKGW*MVILIL
Trigger: GAGGATGAGAATGACCATGCACCAACCTTTGGGAGT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGTGCACTGTGGCTCGTaGTGCCCGGCCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGVHCGS*CPAWSP
Trigger: GGGGCTCCAGGCCGGGCAGCACGAGCCACAGTGCAC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATCCTGCAGCTGCACGTaGACTGTGGCTCGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSCSCT*TVARAA
Trigger: GGCAGCACGAGCCACAGTGCACGTGCAGCTGCAGGA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCATTGGGCCAGGGGCTaGCTCAGCCTTGCGGCTACG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPHWARG*LSLAAT
Trigger: CGTAGCCGCAAGGCTGAGGCAGCCCCTGGCCCAATG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACTGCATCCTGCTGGATaGCTGAGTCAGGGCCACGGG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLLHPAG*LSQGHG
Trigger: CCCGTGGCCCTGACTCAGGCATCCAGCAGGATGCAG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGTCCAGCTGTGCCTTaGGCTCCAGCTCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSPAVP*APAPGQ
Trigger: CTGGCCTGGAGCTGGAGCCCAAGGCACAGCTGGACT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCAAGCTTGAGGGCCCCTaGTCACGGTCCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPKLEGP*SRSRVR
Trigger: CCGGACCCTGGACCGTGACCAGGGGCCCTCAAGCTT...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTCCAGCTCCAGCTCATaGGCTGGCCCTCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPSSSSS*AGPPEG
Trigger: GCCCTCAGGAGGGCCAGCCCATGAGCTGGAGCTGGA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTGTGGTGCTGCGGGGTaGGCTCCCTCCATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPCGAAG*APSILH
Trigger: GTGCAGGATGGAGGGAGCCCACCCCGCAGCACCACA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAGCGCACGTCGCTATTaGGGCCGGGGCCGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGSARRY*GRGRRR
Trigger: ACGCCGACGGCCCCGGCCCCAATAGCGACGTGCGCT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGCAGCGCGGGAGTaGTCTCTCGGTCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGAAARE*SLGPGR
Trigger: GCGGCCTGGACCGAGAGACCACTCCCGCGCTGCTGC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGGCACGACTGAGCTTTaGGGTGGCTGCCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLGTTEL*GGCPRS
Trigger: TGACCGTGGGCAGCCACCCCAAAGCTCAGTCGTGCC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACAGCCTCAGCTCCCGTaGTGCTTCCCGCCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAQPQLP*CFPPGP
Trigger: CGGACCCGGCGGGAAGCACCACGGGAGCTGAGGCTG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGGGTCCTCCAGCTCCTaGCCCACCATAGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLGSSSS*PTIAGK
Trigger: CTTCCCAGCTATGGTGGGCCAGGAGCTGGAGGACCC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACGCTCTGCCTCCGGTTaGTCTCGTAAGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRSASG*SRKSQP
Trigger: GGGCTGTGACTTACGAGATCAACCGGAGGCAGAGCG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCTCGGCCAAGCGAGCTaGGGGAAGCACCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGLGQAS*GKHLHQ
Trigger: CTGGTGCAGGTGCTTCCCTCAGCTCGCTTGGCCGAG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCATAGCGGCCAACACTaGAGGGATCCTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPHSGQH*RDPGAQ
Trigger: CTGGGCCCCAGGATCCCTTCAGTGTTGGCCGCTATG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTTGGCACGGCCCTCATaGGGCCCATCATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPLARPS*GPSCAS
Trigger: GCTGGCACATGATGGGCCTCATGAGGGCCGTGCCAA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGTGACCGTTGGCACCTaGGTCCCGATCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLVTVGT*VPISGR
Trigger: TCTGCCACTGATCGGGACTCAGGTGCCAACGGTCAC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACCAGTGCGGTGTGGGTaGTATCCACGGTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLPVRCG*YPRSQA
Trigger: TGCCTGTGACCGTGGATATCACCCACACCGCACTGG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGGGTAGTCCAGCTGTaGCTTGGGCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRVVQL*LGLQLQ
Trigger: CTGGAGCTGGAGCCCAAGGCACAGCTGGACTACCCT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGTACATGAGAGGAGCTaGCGTGCCTGCCGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPVHERS*RACRKP
Trigger: GGGCTTCCGGCAGGCACGGCAGCTCCTCTCATGTAC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCCAGGGTCCGGGTTGTaGACACATCACCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPPGSGL*THHRCG
Trigger: CCCACAGCGGTGATGTGTGCACAACCCGGACCCTGG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGCTGAGGGAAGCACCTaGACCAGCAGCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPAEGST*TSSWRL
Trigger: CAGCCTCCAGCTGCTGGTGCAGGTGCTTCCCTCAGC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCGCGGGCTCTGGCGCTaGCACCGAGCCCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGRGLWR*HRAQQR
Trigger: TCTCTGTTGGGCTCGGTGGCAGCGCCAGAGCCCGCG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCCGTCCCCGCCAGATaGCAGCCGATAGGACACGCG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGAVPAR*QPIGHA
Trigger: CGCGTGTCCTATCGGCTGGCATCTGGCGGGGACGGC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGCTCCAGTGCTTGAGTaGAGCCGGAAGTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPAPVLE*SRKWPS
Trigger: GGACGGCCACTTCCGGCTGCACTCAAGCACTGGAGC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCAGCAGGAAGGCTCCTaGTGTACCGGCGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPQQEGS*CTGAQV
Trigger: TACCTGGGCGCCGGTACAGCAGGAGCCTTCCTGCTG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGTCCCACTGGGGCCCTaGCTCCAGCTCAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAVPLGP*LQLRLP
Trigger: AGGGAGCCTGAGCTGGAGCCAGGGCCCCAGTGGGAC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGGCAGCCCGAGCCTGTaGGAAGGCTGGAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGGSPSL*EGWSMV
Trigger: GACCATGCTCCAGCCTTCCCACAGGCTCGGGCTGCC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAACGAGCAGGCTCCAGTaGGTAGCGGGTGCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLTSRLQ*VAGAKS
Trigger: GCTTTTGGCACCCGCTACCCACTGGAGCCTGCTCGT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGAGAACCAGTGGGTGTaGGCGCCAGGGGCTAGGCTA +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPENQWV*APGARL
Trigger: TAGCCTAGCCCCTGGCGCCCACACCCACTGGTTCTC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGCTGCACCACAGAATTaGCCCGTCTGGCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPAAPQN*PVWPRA
Trigger: GGCCCTTGGCCAGACGGGCCAATTCTGTGGTGCAGC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGGTGCCAAGCGACCTaGTGGGTTGTGTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRCQAT*WVVCLD
Trigger: GTCCAGGCACACAACCCACCAGGTCGCTTGGCACCT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAACCCGTAGTCGAAAGTaGCTGGTGCGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLTRSRK*LVRGGE
Trigger: CTCCCCACCACGCACCAGCCACTTTCGACTACGGGT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCAGCACGACAGGCACTaGTGCCGCTGGGTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGQHDRH*CRWVPL
Trigger: GAGCGGGACCCAGCGGCACCAGTGCCTGTCGTGCTG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGCACTGAGAGCTGGCTaGCCTCCATCCCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGALRAG*PPSRAS
Trigger: AGAGGCCCGGGATGGAGGCCAGCCAGCTCTCAGTGC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGGCGCAGAGGACTGGTaGGGAAGGTGGGTGCATGGT +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPGAEDW*GRWVHG
Trigger: ACCATGCACCCACCTTCCCCACCAGTCCTCTGCGCC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACTTCAGCTCTCAGTGTaGCCAGAGCCAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLLQLSV*PEPGLG
Trigger: CCCCAACCCTGGCTCTGGCCACACTGAGAGCTGAAG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGACAGAATGGAAGCATTaGCACCAGCATCACGATCTT +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRTEWKH*HQHHDL
Trigger: AAGATCGTGATGCTGGTGCCAATGCTTCCATTCTGT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCGGAGCTCCCAGGGTTaGGGGATGGTGGGGCGATTG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGRSSQG*GMVGRL
Trigger: CAATCGCCCCACCATCCCCCAACCCTGGGAGCTCCG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGGGGCGTGGTCGTTCTaGTCCTGCAGCTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGGAWSF*SCSCTC
Trigger: GCACGTGCAGCTGCAGGACCAGAACGACCACGCCCC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGCCTGGGTTCCAGCTaGAAGACTCGGCCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSLGSS*KTRPQL
Trigger: CAACTGGGGCCGAGTCTTCCAGCTGGAACCCAGGCT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGCTGTTCCGCTGCCTaGTGCCCGACTGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGCSAA*CPTVHP
Trigger: CGGGTGGACAGTCGGGCACCAGGCAGCGGAACAGCC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGGAGCGGTGAGAAGCTaGTGGGAAGATGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGGAVRS*WEDGPG
Trigger: GCCCGGGCCATCTTCCCACCAGCTTCTCACCGCTCC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATCCATCTCAGGGTGCTaGTGCAGGGCAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSISGC*CRAGIP
Trigger: AGGGATCCCTGCCCTGCACCAGCACCCTGAGATGGA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCCGGAAGCCCCGCACTaGTGTCGCCAATCAGTGTAC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPPEAPH*CRQSVY
Trigger: GTACACTGATTGGCGACATCAGTGCGGGGCTTCCGG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGAGCCCAGCTCAGGGTaGGCCCCACCATCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGEPSSG*APPSRA
Trigger: AGCACGAGATGGTGGGGCTCACCCTGAGCTGGGCTC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCAGGTACAAGCGCCCTaGGGCCGCATCCAGCGCGAA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGQVQAP*GRIQRE
Trigger: TTCGCGCTGGATGCGGCCTCAGGGCGCTTGTACCTG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACGGGGAGCCGTGGTCTaGGGCCACCACTGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGARGAVV*GHHCQY
Trigger: GTACTGACAGTGGTGGCCTCAGACCACGGCTCCCCG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCCAGCATCAGGGTCATaGGCCTGTAGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPPASGS*ACSCSS
Trigger: GCTGCTGCAGCTACAGGCTCATGACCCTGATGCTGG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTCTGTGGCCTGCACGTaGCCCAAGCTGTGGCCACGC +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGASVACT*PKLWPR
Trigger: GCGTGGCCACAGCTTGGGTCACGTGCAGGCCACAGA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGCCAGTGGTTGGAACTaGGGGCACCAGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGASGWN*GHQLSR
Trigger: CCTGCTGAGCTGGTGCCCTCAGTTCCAACCACTGGC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCAGCAGCCCCGTGTGTaGGTCGATGGAGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGQQPRV*VDGEGS
Trigger: GGACCCTTCTCCATCGACGCACACACGGGGCTGCTG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCGCTGTGGGCATCAATaGGGAATGGGGGAGATCCGG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPRCGHQ*GMGEIR
Trigger: CCGGATCTCCCCCATTCCGCATTGATGCCCACAGCG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGAGTTCCAGCAGTGGTaGCTGAGGGCAGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPEFQQW*LRAGPH
Trigger: GTGTGGACCTGCCCTCAGGCACCACTGCTGGAACTC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTTCCTGCACTTGCACCTaGACTCGCAGCAGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGSCTCT*TRSSRA
Trigger: CGCGCGGCTGCTGCGAGTGCAGGTGCAAGTGCAGGA...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCCGATAGGACACGCGTaGAGCCTCGCCCAGATCCGG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGPIGHA*SLAQIR
Trigger: CCGGATCTGGGCGAGGCTGCACGCGTGTCCTATCGG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAACGCTGTACTCCTGCTaGTGGAAAGTAGGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLTLYSC*WKVGAS
Trigger: CGAGGCGCCTACTTTCCAGCAGCAGGAGTACAGCGT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGGACGCTGTACTCCTaGTGCTGGAAAGTAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRTLYS*CWKVGA
Trigger: GGCGCCTACTTTCCAGCAGCAGGAGTACAGCGTCCT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGTGGAACAATCCACGTaGCGGCTGGGATGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPVEQST*RLGCSQ
Trigger: CTGGCTGCATCCCAGCCGGCACGTGGATTGTTCCAC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCAGGCAGAGGCCCCCGTaGTATCACCTCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGRQRPP*YHLQPQ
Trigger: CTGAGGCTGGAGGTGATAGCACGGGGGCCTCTGCCT...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGGCTGCCTCAGCCTTaGGGCTACGGGCCCGAACAA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGLPQP*GYGPEQ
Trigger: TTGTTCGGGCCCGTAGCCGCAAGGCTGAGGCAGCCC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATCCCGGCCCAGTTTCTaGAGTGAGTCACTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSRPSF*SESLAR
Trigger: CCTAGCCAGTGACTCACTGCAGAAACTGGGCCGGGA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCATGGGTCAGGTCCCACTaGGGCCCTGGCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAWVRSH*GPGSSS
Trigger: TGAGCTGGAGCCAGGGCCCCAGTGGGACCTGACCCA...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACTTGACCTCAGACTTTaGGTCAGGTCCCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLLDLRL*VRSHWG
Trigger: GCCCCAGTGGGACCTGACCCAAAGTCTGAGGTCAAG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTACTGGAGTCCCATCTaGACCGGGGCGTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPYWSPI*TGACLQ
Trigger: CTGGAGACACGCCCCGGTCCAGATGGGACTCCAGTA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGCGGCCTCAGACACTTaGGGGGAGCCATCTGCACTG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGAASDT*GEPSAL
Trigger: CAGTGCAGATGGCTCCCCCCAAGTGTCTGAGGCCGC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTCAATGGAGAACCAGTaGGTGTGGGCGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPSMENQ*VWAPGA
Trigger: AGCCCCTGGCGCCCACACCCACTGGTTCTCCATTGA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACACTATCCGCGTCTGTaGCTGTCACCTGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLHYPRL*LSPAGS
Trigger: GCTTCCTGCAGGTGACAGCCACAGACGCGGATAGTG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCGCCCATGGGATCCCTaGTCAGGGTCATGGGCACGC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGRPWDP*SGSWAR
Trigger: GCGTGCCCATGACCCTGACCAGGGATCCCATGGGCG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCAGAATTGGCCCGTCTaGCCAAGGGCCAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPQNWPV*PRARLL
Trigger: CAGTAGCCTGGCCCTTGGCCAGACGGGCCAATTCTG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGGTGGGTTGTGTGCCTaGACTATGCCCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLGGLCA*TMPTLV
Trigger: CACCAGTGTGGGCATAGTCCAGGCACACAACCCACC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCCCCCATCTGGTGCTTaGGCCTGCACTTGCAGGACC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGPPSGA*ACTCRT
Trigger: GGTCCTGCAAGTGCAGGCCCAAGCACCAGATGGGGG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCTGGTCCCTGGGGGCTaGTTCTCAGCCACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGLVPGG*FSATAR
Trigger: CCTGGCTGTGGCTGAGAACCAGCCCCCAGGGACCAG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCTGAGTCTCGGTCAGTaGCAAAGACTCGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPLSLGQ*QRLGPR
Trigger: GCGTGGGCCGAGTCTTTGCCACTGACCGAGACTCAG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGTCACTTCTCCAGTCTaGGGGTGGATGCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPVTSPV*GWMRKA
Trigger: GGCCTTCCGCATCCACCCCCAGACTGGAGAAGTGAC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACATGCACAGTGCCTGTaGTGCTGCGGGGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAHAQCL*CCGVGS
Trigger: GGAGCCCACCCCGCAGCACCACAGGCACTGTGCATG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAGGCACTGGTGCCGCTaGGTCCCGCTCTGCGAGATC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGRHWCR*VPLCEI
Trigger: GATCTCGCAGAGCGGGACCCAGCGGCACCAGTGCCT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTAGGGTCTGGGGGTCCTaGCCCTCAGGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGARVWGS*PSGTSR
Trigger: TCTGGAGGTGCCTGAGGGCCAGGACCCCCAGACCCT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGTAGGCGCAGAGGACTaGTGGGGAAGGTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPVGAED*WGRWVH
Trigger: ATGCACCCACCTTCCCCACCAGTCCTCTGCGCCTAC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACAGAGACGGAGAGAATaGCACTGCCTGGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLQRRRE*HCLGVC
Trigger: ACACACCCCCAGGCAGTGCCATTCTCTCCGTCTCTG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACCATCTGCATCCTGCTaGATGCCTGAGTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLPSASC*MPESGP
Trigger: TGGCCCTGACTCAGGCATCCAGCAGGATGCAGATGG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGCTGTGGCAGTGGCTaGGGGCCCCTCCTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAGCGSG*GPLLSV
Trigger: TACAGAGAGGAGGGGCCCCCAGCCACTGCCACAGCC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACGCACCTGCCACACATaGCTTGCCATCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRTCHT*LAICWE
Trigger: TTCCCAGCAGATGGCAAGCCATGTGTGGCAGGTGCG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGGCAGTGATGAGGGGTaGTGGGTCGATACGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGGSDEG*WVDTGS
Trigger: GCTCCCCGTATCGACCCACCACCCCTCATCACTGCC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCAGAAGCTGGGGGACATaGCAGCTGAGGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPRSWGT*QLRTGS
Trigger: GCTCCCTGTCCTCAGCTGCCATGTCCCCCAGCTTCT...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGAGTGGGGCCTGCGTTaGGGACACTGTGCGCATCCC +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAEWGLR*GHCAHP
Trigger: GGGATGCGCACAGTGTCCCCAACGCAGGCCCCACTC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTTTCAGGGTGGAGAGCTaGGGCCTGGTGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGFRVES*GLVVAS
Trigger: GGAGGCCACCACCAGGCCCCAGCTCTCCACCCTGAA...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTTCCAGGCACAATGCTaGTGTCCACTCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPFQAQC*CPLGHW
Trigger: CCAGTGCCCGAGTGGACATCAGCATTGTGCCTGGAA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTCGACTGTTAACACCTaGGTCGGGGTCAAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPSTVNT*VGVKSP
Trigger: CGGGCTCTTGACCCCGACTCAGGTGTTAACAGTCGA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCAGCCACACGGTAGTGTaGCAATGTGAAGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPSHTVV*QCEARG
Trigger: GCCCCGAGCTTCACATTGTCACACTACCGTGTGGCT...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAGTGACTGGCACGACTaGGCTTTGGGGTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGSDWHD*ALGWLP
Trigger: GGGCAGCCACCCCAAAGCTCAGTCGTGCCAGTCACT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCGGCCACGCTGGTGCTaGGTAAGTTCAGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGRPRWC*VSSVGR
Trigger: CCTTCCCACTGAACTTACTCAGCACCAGCGTGGCCG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGGGAGCCTTCATGGCTaGTGGGGGAGCGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAGSLHG*WGSGEK
Trigger: CTTCTCACCGCTCCCCCATCAGCCATGAAGGCTCCC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGGGGACATGGCAGCTaGGGACAGGGAGCCTTCATG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAGGHGS*GQGAFM
Trigger: CATGAAGGCTCCCTGTCCTCAGCTGCCATGTCCCCC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGGGATCCCTCACTaGGGAGAACCCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGAGIPH*GEPRAA
Trigger: AGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCTGC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACAATGGCCAGGTCTGTaGCCACGCCGCTGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAQWPGL*PRRCPL
Trigger: AAGAGGGCAGCGGCGTGGGCACAGACCTGGCCATTG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAGTGGCCGCTCTAACTaGAGCAGCCCCGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGSGRSN*SSPVCA
Trigger: CGCACACACGGGGCTGCTGCAGTTAGAGCGGCCACT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGGTCTGACACAGAGATaGGAGCAACGAGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLGLTQR*EQRAVQ
Trigger: CTGGACAGCTCGTTGCTCGCATCTCTGTGTCAGACC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCACACTGGTGCCTGGTaGCACATCCTCTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPHTGAW*HILWHR
Trigger: TCTGTGCCAGAGGATGTGGCACCAGGCACCAGTGTG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTGTGTGCCTGGACTATaGCCACACTGGTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPCVPGL*PHWCLV
Trigger: CACCAGGCACCAGTGTGGGCATAGTCCAGGCACACA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCAGTGTGTAGGTGAGTaGACCCACACCCGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGQCVGE*THTRGL
Trigger: GAGCCCGCGGGTGTGGGTGCACTCACCTACACACTG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAACCACTGTCAGTACGTaGTCAGCTCGTTGTTCGCGG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLTTVST*SARCSR
Trigger: CCGCGAACAACGAGCTGAGCACGTACTGACAGTGGT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTCCATTTGTGCCTCCTaGATGGACGGCCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGSICAS*MDGPGG
Trigger: TCCCCCAGGGCCGTCCATGCAGGAGGCACAAATGGA...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTCCTCCACTCTCTGCCTaGAGCACCAGTCGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAPPLSA*STSRSR
Trigger: ACGGCTGCGACTGGTGCTGCAGGCAGAGAGTGGAGG...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCGGAGAGAATGGCACTaGCTGGGGGTGTGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPRREWH*LGVCAQ
Trigger: TTGAGCACACACCCCCAGGCAGTGCCATTCTCTCCG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATGCCAAAGCAAAGTGTaGACCAGCAGGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLCQSKV*TSRVSS
Trigger: GCTGCTGACCCTGCTGGTGCACACTTTGCTTTGGCA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGAAGATGGCCCGGGCTaGAGCTGTGTTTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPEDGPG*SCVCWL
Trigger: AAGCCAGCAAACACAGCTGCAGCCCGGGCCATCTTC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCATCTCAGGGTGCTGGTaGAGGGCAGGGATCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGISGCW*RAGIPH
Trigger: GTGAGGGATCCCTGCCCTGCACCAGCACCCTGAGAT...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCACTGTGTTCGTCAATaGCCAGGTCTGTGCCCACGC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPHCVRQ*PGLCPR
Trigger: GCGTGGGCACAGACCTGGCCATTGACGAACACAGTG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGCAGGCCACCATCTGTaGCCACCACAATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPAGHHL*PPQSAV
Trigger: CACAGCTGATTGTGGTGGCCACAGATGGTGGCCTGC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGGAGAGGAGGCCAAATaGGCCACTATCCGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPGEEAK*ATIRVC
Trigger: ACAGACGCGGATAGTGGCCCATTTGGCCTCCTCTCC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCAGCTACAGCGAAAGCTaGGGGCACTCCACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGSYSES*GHSTAC
Trigger: GCAGGCAGTGGAGTGCCCCCAGCTTTCGCTGTAGCT...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTAGCATGGTAAGGGTCTaGGGGTCCTGGCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGASMVRV*GSWPSG
Trigger: GCCTGAGGGCCAGGACCCCCAGACCCTTACCATGCT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGGCTCCCTCTGTCTGTaGCCATCAGCACCAACCGTG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGGSLCL*PSAPTV
Trigger: CACGGTTGGTGCTGATGGCCACAGACAGAGGGAGCC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACTGAGTCCCGATCAGTaGCAGAGACGGAGAGAATGG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLLSPDQ*QRRREW
Trigger: CCATTCTCTCCGTCTCTGCCACTGATCGGGACTCAG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGCTCCTGACCCGTCATaGCCCAAGGCCACTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAAPDPS*PKATVP
Trigger: GGGAACAGTGGCCTTGGGCCATGACGGGTCAGGAGC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGCACCTTCGGGCACTTaGAAGTGGAAAGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPAPSGT*KWKAGA
Trigger: GGCACCAGCTTTCCACTTCCAAGTGCCCGAAGGTGC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACGGTCACAGGCACTGTaGCACTCCGGGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGARSQAL*HSGNQA
Trigger: TGCCTGGTTCCCGGAGTGCCACAGTGCCTGTGACCG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCAGGCCCAGTGCGGTGTaGGTGATATCCACGGTCACA +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPRPSAV*VISTVT
Trigger: TGTGACCGTGGATATCACCCACACCGCACTGGGCCT...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGGGTGGTGGACTAGGTaGCTCCCGGCCCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAGWWTR*LPAQFL
Trigger: CAGAAACTGGGCCGGGAGCCACCTAGTCCACCACCC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGTCGATACGGGGAGCTaGGGGACATGGCCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAVDTGS*GTWPSF
Trigger: GAAGCTCGGCCATGTCCCCCAGCTCCCCGTATCGAC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCAGTGATGAGGGGTGGTaGGTCGATACGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGSDEGW*VDTGSW
Trigger: CCAGCTCCCCGTATCGACCCACCACCCCTCATCACT...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCTGTGTTTGCTGGCTTaGGGGGCACAGACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPLCLLA*GAQTWL
Trigger: GAGCCAAGTCTGTGCCCCCCAAGCCAGCAAACACAG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGAGGCTGAGGGACCCTaGGCCACCCCAAATGGTGAG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGEAEGP*ATPNGE
Trigger: CTCACCATTTGGGGTGGCCCAGGGTCCCTCAGCCTC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTGCACTTGCAGGACCTaGGTTCCAGCAGTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGCTCRT*VPAVVP
Trigger: AGGCACCACTGCTGGAACTCAGGTCCTGCAAGTGCA...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGGGCCCGAAGAGTCGTaGGAACACCAGTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGGPEES*EHQCQD
Trigger: ATCCTGACACTGGTGTTCTCACGACTCTTCGGGCCC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTAAAGCAGCGTGGCACTaGGAGCTGGCTGGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAKAAWH*ELAGLH
Trigger: ATGGAGGCCAGCCAGCTCTCAGTGCCACGCTGCTTT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCCTCCACAAGCACTGTaGGGTTGGCACGGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGPPQAL*GWHGPH
Trigger: ATGAGGGCCGTGCCAACCTCACAGTGCTTGTGGAGG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCACAGTGACAGAGGCTaGGAGATTCCCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPHSDRG*EIPSIS
Trigger: GCTGATGCTGGGAATCTCTCAGCCTCTGTCACTGTG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCTGATGGGGGAGCGGTaGGAAGCTGGTGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGLMGER*EAGGKM
Trigger: CATCTTCCCACCAGCTTCTCACCGCTCCCCCATCAG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCCTGGGGCTCTTCATaGCAGGGCAGGAAGGCACAA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGAWGSS*QGRKAQ
Trigger: TTGTGCCTTCCTGCCCTGGCATGAAGAGCCCCAGGC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTGCTCCTCATCAATCTaGAAGTCCAGGCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPCSSSI*KSRLPA
Trigger: GGCTGGGAGCCTGGACTTGCAGATTGATGAGGAGCA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTCAGACGCCCAGCATCTaGATCACGAGCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAQTPSI*ITSRLQ
Trigger: CTGGAGCCTGCTCGTGATGCAGATGCTGGGCGTCTG...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGCATCGGCATCAGATaGGAACACCTGCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSIGIR*EHLQDR
Trigger: CCTGTCTTGCAGGTGTTCGCATCTGATGCCGATGCT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTACCTCAGCACAGCTGTaGCTGGTGGACTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGATSAQL*LVDSGH
Trigger: GTGCCCAGAGTCCACCAGGCACAGCTGTGCTGAGGT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGAAAACATACTGTAGTTaGTCAAATATGGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GGELGPGGGLPVASHSPRKTYCS*SNMGGV
Trigger: CACACCACCCATATTTGAGCAACTACAGTATGTTTT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGCTGTGCCTGTCTGCTaGCCCAACTCAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGAVPVC*PNSALD
Trigger: GTCCAAAGCTGAGTTGGGGCAGCAGACAGGCACAGC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACTGCAACATGCACAGTaGCTGTGGTGCTGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGALQHAQ*LWCCGV
Trigger: CACCCCGCAGCACCACAGGCACTGTGCATGTTGCAG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGCAGCTCCTGAAGCCTaGAGGAACGTGGGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAAAPEA*RNVGLL
Trigger: CAACAGCCCCACGTTCCTGCAGGCTTCAGGAGCTGC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACGGACAGCGCTCCAGTaGTTGAGTGCAGCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGARTALQ*LSAAGS
Trigger: ACTTCCGGCTGCACTCAAGCACTGGAGCGCTGTCCG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCCAAGGCTGCAGCTGTaGGCAGTTCTCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGPRLQL*AVLQSW
Trigger: CCAGCTCTGGAGAACTGCGCACAGCTGCAGCCTTGG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAGCCCCGTGGTCTCGTaGTTCCAGCACCACATCCAC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGSPVVS*FQHHIH
Trigger: GTGGATGTGGTGCTGGAAGCACGAGACCACGGGGCT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCCACAGCGGCATGGCTaGGGCTTCCATCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGPQRHG*GFHQHL
Trigger: CAGATGCTGATGGAAGCCGCAGCCATGCCGCTGTGG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATCAGAGGCCTCTACATaGAGCAGCTCAGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSEAST*SSSAPT
Trigger: TGTTGGAGCTGAGCTGCTGCATGTAGAGGCCTCTGA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGGCCAGTCGCAAGGTaGCTGAGCTCTCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGPVAR*LSSHPA
Trigger: AGCTGGATGAGAGCTCAGGCACCTTGCGACTGGCCC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTGCACCACCAGTTCATaGACCCGCCGCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGCTTSS*TRRCSK
Trigger: CTTTGAGCAGCGGCGGGTCCATGAACTGGTGGTGCA...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAAACGAGCTGTCCAGGTaGGGCGGCCTCAGACACTTG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGANELSR*GGLRHL
Trigger: CAAGTGTCTGAGGCCGCCCCACCTGGACAGCTCGTT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGCATCAATGCGGAATaGGGGAGATCCGGAGGACCC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGINAE*GRSGGP
Trigger: GGGTCCTCCGGATCTCCCCCATTCCGCATTGATGCC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACACAGCTGTGCCTGGTaGACTCTGGGCACTTATACT +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLHSCAW*TLGTYT
Trigger: AGTATAAGTGCCCAGAGTCCACCAGGCACAGCTGTG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTGCCAAGCGACCTGGTaGGTTGTGTGCCTGGACTAT +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPCQATW*VVCLDY
Trigger: ATAGTCCAGGCACACAACCCACCAGGTCGCTTGGCA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCCCGCAGTGTATAGATaGGAGTCCCTGGGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGPAVYR*ESLGQC
Trigger: ACACTGCCCCAGGGACTCCCATCTATACACTGCGGG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCTCATAAGCCGTACATaGCCTGTGGTGGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGLISRT*PVVGST
Trigger: CGTGGACCCCACCACAGGCCATGTACGGCTTATGAG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACCTGAGTTCCAGCAGTaGTGCCTGAGGGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAPEFQQ*CLRAGP
Trigger: TGGACCTGCCCTCAGGCACCACTGCTGGAACTCAGG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGCCCCAACTCAGCTTTaGACCCAGACACTGCCATTA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLAPTQL*TQTLPL
Trigger: TAATGGCAGTGTCTGGGTCCAAAGCTGAGTTGGGGC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCCACAGCCAGGAAGGTaGGATCCTCAGACAAGCGGG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGPQPGR*DPQTSG
Trigger: CCCGCTTGTCTGAGGATCCCACCTTCCTGGCTGTGG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATCACGGTCCAGGGTTTaGAGTGTGGTCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSRSRV*SVVTSP
Trigger: TGGAGAAGTGACCACACTCCAAACCCTGGACCGTGA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAATTCTCCCCCTCATCTaGATCCTTCGCCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLILPLI*ILRLQS
Trigger: ACTCTGCAGGCGAAGGATCCAGATGAGGGGGAGAAT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTACCTGCACCAGCAGCTaGAGGCTGGCACTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGATCTSS*RLALRG
Trigger: TCCTCGAAGTGCCAGCCTCCAGCTGCTGGTGCAGGT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAAGTAGTGCCAGGAGGTaGTGTGCCTGCCAGCCGGTA +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGASSARR*CACQPV
Trigger: TACCGGCTGGCAGGCACACCACCTCCTGGCACTACT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTTTTGTGCCTCCTGCATaGACGGCCCTGGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGFVPPA*TALGET
Trigger: TGTCTCCCCCAGGGCCGTCCATGCAGGAGGCACAAA...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTCACAGTCCAGGGCATaGGCCAGTCGCAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGASQSRA*ASRKVP
Trigger: AGGCACCTTGCGACTGGCCCATGCCCTGGACTGTGA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTCTGCAGTGAGTCACTaGCTAGGGGTGCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGSAVSH*LGVLPV
Trigger: CACAGGCAGCACCCCTAGCCAGTGACTCACTGCAGA...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGAGAGGAGGCCACACTaGCCACACGGGGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAERRPH*PHGGTH
Trigger: ATGAGTTCCCCCGTGTGGCCAGTGTGGCCTCCTCTC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCCTCTCTGTAGAGAGTaGCTCCTGCACCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGPLCRE*LLHLAA
Trigger: TGCTGCCAGGTGCAGGAGCCACTCTCTACAGAGAGG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGGGAGCTGGGGGACATaGCCGAGCTTCATCCTTGAG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAGSWGT*PSFILE
Trigger: CTCAAGGATGAAGCTCGGCCATGTCCCCCAGCTCCC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTCACAGACTTGGCTCCTaGGTGGGCCACGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAHRLGS*VGHGSD
Trigger: ATCACTGCCGTGGCCCACCCAGGAGCCAAGTCTGTG...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTAAGCTGGTGGGAAGATaGCCCGGGCTGCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAKLVGR*PGLQLC
Trigger: ACACAGCTGCAGCCCGGGCCATCTTCCCACCAGCTT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACTCCGTGTCATCAGGTaGCTCCAGGCCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGALRVIR*LQARLC
Trigger: GCAGAGTCTGGCCTGGAGCCACCTGATGACACGGAG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATCCCCACATTGGACCTaGTCACAGGTCAGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSPHWT*SQVSEQ
Trigger: TTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTCTGGAGCATGGTCGTTaGTGTCAGCCACTCGCACTG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGALEHGR*CQPLAL
Trigger: CAGTGCGAGTGGCTGACATCAACGACCATGCTCCAG...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGTAGCGGCTCTGATTaGAAGCCGGGGCATGGTCAT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGSGSD*KPGHGH
Trigger: ATGACCATGCCCCGGCTTTCAATCAGAGCCGCTACC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCATGTGAAGTCAAAGCTTaGGGGCCCCTGGTCACGGTC +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGACEVKA*GPLVTV
Trigger: GACCGTGACCAGGGGCCCTCAAGCTTTGACTTCACA...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGTGACATGCGTTAACTaGGGAGGTGAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAVTCVN*GGEPLS
Trigger: GGACAGGGGCTCACCTCCTCAGTTAACGCATGTCAC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAGTGTGACAATGTaGAGCTCGGGGCGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAGSVTM*SSGRGR
Trigger: ACGACCACGCCCCGAGCTTCACATTGTCACACTACC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCTACTAATAGCAGGTTaGGGTCAGGTGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGLLIAG*GQVPGP
Trigger: TGGGCCTGGCACCTGACCTCAACCTGCTATTAGTAG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAAGTTCCAGGCTGGGTaGCCTCAGGCAGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGKFQAG*PQAVRH
Trigger: ATGCCTCACTGCCTGAGGGCACCCAGCCTGGAACTT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTCTGTGGCTGTCACCTaGAGGAAGCAAGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGSVAVT*RKQVPG
Trigger: GCCTGGAACTTGCTTCCTGCAGGTGACAGCCACAGA...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGGAAAGGGTCACAGGTaGCAAGCGACCTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAGKGHR*QATWWV
Trigger: AACCCACCAGGTCGCTTGGCACCTGTGACCCTTTCC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTACCGTGTCTTCAGGTaGAGGAAAGGCAGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPYRVFR*RKGRGV
Trigger: AACTCCCCTGCCTTTCCTGCACCTGAAGACACGGTA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAACTTGCTCCCTCTGCTaGAAGGTGATAGGTGATAGG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLTCSLC*KVIGDR
Trigger: CCTATCACCTATCACCTTGCAGCAGAGGGAGCAAGT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCCAGGAGCTGATAGCTaGTCTGCTGCTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGPGADS*SAAHGP
Trigger: TGGACCGTGAGCAGCAGAGCAGCTATCAGCTCCTGG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTTCTCGTCCTGCACTTaGACCTGCACTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAFSSCT*TCTRSS
Trigger: GCTGCTGCGAGTGCAGGTGCAAGTGCAGGACGAGAA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCTAGTGGCCGCATGGTaGCAAACTCTCCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPLVAAW*QTLQKQ
Trigger: TTGCTTCTGGAGAGTTTGGCACCATGCGGCCACTAG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGTGGGGAAGGTGGGTaGATGGTCATTGACATCGCG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGGEGG*MVIDIA
Trigger: CGCGATGTCAATGACCATGCACCCACCTTCCCCACC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAAGGAGGTGGTGTGCCTaGCAGCCGGTACAGAATGGA +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGARRWCA*QPVQNG
Trigger: TCCATTCTGTACCGGCTGGCAGGCACACCACCTCCT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGAGTGGTCACGAGAGTaGCTGGAGGCTGATTCTCGG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAEWSRE*LEADSR
Trigger: CCGAGAATCAGCCTCCAGGCACTCTCGTGACCACTC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTGGCAGCAGCAGCCCTaGCTTTCGGCCCTTATACCA +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAWQQQP*LSALIP
Trigger: TGGTATAAGGGCCGAAAGGCAGGGCTGCTGCTGCCA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTACCAGCTCAGGTACTaGAGTCCCATCTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAYQLRY*SPIWTG
Trigger: CCCGGTCCAGATGGGACTCCAGTACCTGAGCTGGTA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGGGCTGATTGTCATTaGCATCTCGCACATGCACAG +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLRADCH*HLAHAQ
Trigger: CTGTGCATGTGCGAGATGCCAATGACAATCAGCCCT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACTGAGGTGGGGTCAATaGAGAACCAGTGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGALRWGQ*RTSGCG
Trigger: CCCACACCCACTGGTTCTCCATTGACCCCACCTCAG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCCAGGGTTTGGAGTGTaGTCACTTCTCCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGPGFGV*SLLQSG
Trigger: CCCAGACTGGAGAAGTGACCACACTCCAAACCCTGG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACTGTACTCCTGCTGCTaGAAAGTAGGCGCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGALYSCC*KVGASS
Trigger: CGACGAGGCGCCTACTTTCCAGCAGCAGGAGTACAG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGAGCCCCTGTCCTaGGCATACACTGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAGEPLS*AYTVRL
Trigger: CAACCTGACAGTGTATGCCCAGGACAGGGGCTCACC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCATTGGCTCCCACATCTaGATCAGAGGCCCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPIGSHI*IRGPKH
Trigger: ATGCTTCGGGCCTCTGATCCAGATGTGGGAGCCAAT...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGGAAGGTGGGTGCATaGTCATTGACATCGCGCACC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGKVGA*SLTSRT
Trigger: GGTGCGCGATGTCAATGACCATGCACCCACCTTCCC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTACACTGAAGGGATCCTaGGGCCCAGATGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGTLKGS*GPDGLS
Trigger: GCTAAGCCCATCTGGGCCCCAGGATCCCTTCAGTGT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGAGAATGGCACTGCCTaGGGGTGTGTGCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAENGTA*GCVLKQ
Trigger: CTGCTTGAGCACACACCCCCAGGCAGTGCCATTCTC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAAGTCACAGCCCCATTaGCACCAGCATCGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGKSQPH*HQHRHQ
Trigger: CTGATGCCGATGCTGGTGTCAATGGGGCTGTGACTT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCCACAGCTGTCACTGTaGAGTCAAAGCTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGPQLSL*SQSLRA
Trigger: GGCCCTCAAGCTTTGACTTCACAGTGACAGCTGTGG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTCATATACCATGGACTTaGGGCCTCCCCCATCCACAG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAHIPWT*GLPHPQ
Trigger: CTGTGGATGGGGGAGGCCTCAAGTCCATGGTATATG...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAACGTCCATTGGGTCCTaGGTCTCGGTCAGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGATSIGS*VSVSGK
Trigger: TTTGCCACTGACCGAGACTCAGGACCCAATGGACGT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGATCAGTGGCCACAATaGAGAGGACACGATCTCGGG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGADQWPQ*RGHDLG
Trigger: CCCGAGATCGTGTCCTCTTCATTGTGGCCACTGATC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCCTGTACTACAAGCTaGTGTCGAGCCTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGACTTS*CRAWVS
Trigger: TGAGACCCAGGCTCGACATCAGCTTGTAGTACAGGC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCACGGGGGAACTCATTaGTCATGCGGATCTCATCAT +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPHGGTH*SCGSHH
Trigger: ATGATGAGATCCGCATGATCAATGAGTTCCCCCGTG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTACCATCAGGAGTGACTaGAGTGAAGCGGTAGCGGTC +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGATIRSD*SEAVAV
Trigger: GACCGCTACCGCTTCACTGCAGTCACTCCTGATGGT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACCAGTGGGTAGCGGGTaGCAAAAGCTGTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAPVGSG*QKLYAQ
Trigger: CTGAGCATACAGCTTTTGGCACCCGCTACCCACTGG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACCACCATCTCGTGCTTaGACCACCAGTTCATGGACC +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAPPSRA*TTSSWT
Trigger: GGTCCATGAACTGGTGGTGCAAGCACGAGATGGTGG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTAGCCCCACCATCTCGTaGTTGCACCACCAGTTCATG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGASPTIS*LHHQFM
Trigger: CATGAACTGGTGGTGCAAGCACGAGATGGTGGGGCT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTACCTGGTGGGTTGTGTaGCTGGACTATGCCCACACT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGATWWVV*LDYAHT
Trigger: AGTGTGGGCATAGTCCAGGCACACAACCCACCAGGT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACACTTCGAGGAGGGCTaGCTTGGTCATGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAHFEEG*LGHEHS
Trigger: TGAGTGCTCATGACCAAGGCAGCCCTCCTCGAAGTG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGTCCCCATCTAGGATaGGGTACTGCAACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGPHLG*GTATAH
Trigger: ATGGGCAGTTGCAGTACCGCATCCTAGATGGGGACC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTTTCTCTGTCCAAGGCTaGAGCTGTGCGCAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGFSVQG*SCAQFS
Trigger: GGAGAACTGCGCACAGCTGCAGCCTTGGACAGAGAA...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTATGAGGCCCATCATGTaGCAGCAGCTGCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAMRPIM*QQLQLV
Trigger: TACCAGCTGCAGCTGCTGGCACATGATGGGCCTCAT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAAGCATCCCCGTCGATTaGATGCAGAGTGGTCACGAG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGASIPVD*MQSGHE
Trigger: CTCGTGACCACTCTGCATGCAATCGACGGGGATGCT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAGACCATCTGCATCCTaGTGGATGCCTGAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGRPSAS*WMPESG
Trigger: CCCTGACTCAGGCATCCAGCAGGATGCAGATGGTCT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAGCCTGTGGGAAGGCTaGAGCATGGTCGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGSLWEG*SMVVDV
Trigger: GACATCAACGACCATGCTCCAGCCTTCCCACAGGCT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTACACCACAATCAGCTGTaGCTGAGGTTCCAACTCATA +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLHHNQL*LRFQLI
Trigger: TATGAGTTGGAACCTCAGCCACAGCTGATTGTGGTG...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTCTGGGCACTTATACTaGCAGCATACTCCCGTGGAT +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPSGHLY*QHTPVD
Trigger: ATCCACGGGAGTATGCTGCCAGTATAAGTGCCCAGA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGTGCCTGGTGGACTCTaGGCACTTATACTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGVPGGL*ALILAA
Trigger: TGCTGCCAGTATAAGTGCCCAGAGTCCACCAGGCAC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCAGCACAGCTGTGCCTaGTGGACTCTGGGCACTTAT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGQHSCA*WTLGTY
Trigger: ATAAGTGCCCAGAGTCCACCAGGCACAGCTGTGCTG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAAGTATGTACAATTCCTaGGCCTCACGGTCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSMYNS*ASRSSA
Trigger: AGCACTAGACCGTGAGGCCCAGGAATTGTACATACT...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAAGGTCAGACGTCCATTaGGTCCTGAGTCTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGARSDVH*VLSLGQ
Trigger: CTGACCGAGACTCAGGACCCAATGGACGTCTGACCT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATTAGCGTGTACAAGATaGTCCCATTCTCCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLLACTR*SHSPPH
Trigger: ATGAGGGGGAGAATGGGACCATCTTGTACACGCTAA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGACAATAGGAGTCCCTaGGGGCGCATTCTCACGAAT +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGDNRSP*GRILTN
Trigger: ATTCGTGAGAATGCGCCCCCAGGGACTCCTATTGTC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGAAGACACTGGCCAGTaGTTGGAACTGAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGEDTGQ*LELRAP
Trigger: TGGTGCCCTCAGTTCCAACCACTGGCCAGTGTCTTC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCATGGGTCCAAACATGTTaGAGGGACCTCCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAWVQTC*RDLLHP
Trigger: GGGATGGAGGAGGTCCCTCCAACATGTTTGGACCCA...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTACAGTCATGGAGGGCTaGTTGTCATTGGCATCTCGC +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGATVMEG*LSLASR
Trigger: GCGAGATGCCAATGACAATCAGCCCTCCATGACTGT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGGCTAGGCTATAAGTaGCCTGACCATTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGLGYK*PDHWCL
Trigger: AAGGCACCAATGGTCAGGTCACTTATAGCCTAGCCC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTTGGGGCTGTTGTCGTTaGGGTCAAGCACTGCAACAT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGWGCCR*GQALQH
Trigger: ATGTTGCAGTGCTTGACCTCAACGACAACAGCCCCA...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTTGTCATTCTCATCCGTaGCGAAGACGCGCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGCHSHP*RRRALK
Trigger: TTTCAGCGCGCGTCTTCGTCACGGATGAGAATGACA...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCTGTTCCCACTATTGTaGACAGGGTCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGLFPLL*TGSHCW
Trigger: CCAACAATGGGACCCTGTTCACAATAGTGGGAACAG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAATGCCCAGCTCCTTCTaGATGACAAGGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAMPSSF*MTRVVQ
Trigger: CTGGACTACCCTTGTCATGCAGAAGGAGCTGGGCAT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAAGTGTACCCGCTGGCTaGTCCTCATCAATCTGCAAG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGASVPAG*SSSICK
Trigger: CTTGCAGATTGATGAGGAGCAGCCAGCGGGTACACT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGTGCCAAAAGCTGTATaGTCAGGTACCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGVPKAV*SGTCRA
Trigger: TGCCCTGCAGGTACCTGAGCATACAGCTTTTGGCAC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTTTGGCATCTCGCACATaGACAGTCACAAAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGLASRT*TVTKAE
Trigger: CTCGGCCTTTGTGACTGTGCATGTGCGAGATGCCAA...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTCAAGCACTGCAACATaGACAGTGCCTGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGASSTAT*TVPVVL
Trigger: CAGCACCACAGGCACTGTGCATGTTGCAGTGCTTGA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGTTGAGGTCAAGCACTaGAACATGCACAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGVEVKH*NMHSAC
Trigger: ACAGGCACTGTGCATGTTGCAGTGCTTGACCTCAAC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCGCTCAGCTTCCCCCTaGAGTCCAACAATGATCACA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGRSASP*SPTMIT
Trigger: TGTGATCATTGTTGGACTGCAGGGGGAAGCTGAGCG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTTGTCGTTGGCATCTTaGAGGGTCAGGGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGALSLAS*RVRVST
Trigger: TGTGCTGACCCTGACCCTGCAAGATGCCAACGACAA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTGTCACACGGTAGGATaGTCGGGTAAAGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGACHTVG*SGKDRW
Trigger: CCACCTGTCTTTACCCGAGCATCCTACCGTGTGACA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAACTGCAACTGCCCATTaGCTCCCACATCTGGATCAG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGATATAH*LPHLDQ
Trigger: CTGATCCAGATGTGGGAGCCAATGGGCAGTTGCAGT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCCAGCCGGTACAGAATaGAAGCATTGGCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGPAGTE*KHWHQH
Trigger: ATGCTGGTGCCAATGCTTCCATTCTGTACCGGCTGG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGCACCTGTACTAGGCTaGATGGAGAATGTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGAPVLG*MENVPF
Trigger: GAAAGGGACATTCTCCATCCAGCCTAGTACAGGTGC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTAGGAAATGTGACCGTTaGCACCTGAGTCCCGATCAG +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGARKCDR*HLSPDQ
Trigger: CTGATCGGGACTCAGGTGCCAACGGTCACATTTCCT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGTTCAGTGGGAAGGCTaGGCCATGATCATTCACATC +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGVQWEG*AMIIHI
Trigger: GATGTGAATGATCATGGCCCAGCCTTCCCACTGAAC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGGAACCCAAAGGAGCTaGGTCCAAACATGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAGTQRS*VQTCWR
Trigger: CCTCCAACATGTTTGGACCCAGCTCCTTTGGGTTCC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCATTGACATCAGTGACGTaGAGCACAAAGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGALTSVT*STKAAS
Trigger: TGAGGCTGCCTTTGTGCTGCACGTCACTGATGTCAA...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTTATCATTCACATCTTaGAGGGCCACGCTAACTGTG +
Preference number: 4 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPLSFTS*RATLTV
Trigger: CACAGTTAGCGTGGCCCTGCAAGATGTGAATGATAA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTAGAGGGCGAAGTGTTTaGAACAGTCCTGATACCGCA +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGARGRSV*NSPDTA
Trigger: TGCGGTATCAGGACTGTTGCAAACACTTCGCCCTCT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGCTACTTGCTCCCTCTaGTGCAAGGTGATAGGTGAT +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAATCSL*CKVIGD
Trigger: ATCACCTATCACCTTGCAGCAGAGGGAGCAAGTAGC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAATCAGTGTACCCGCTaGCTGCTCCTCATCAATCTG +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGNQCTR*LLLINL
Trigger: CAGATTGATGAGGAGCAGCCAGCGGGTACACTGATT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGCAGCATACTCCCGTaGATAAAACTGAGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGSILP*IKLRRV
Trigger: AACCCTCCTCAGTTTTATCCACGGGAGTATGCTGCC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGTAGTTGCTCAAATATaGGTGGTGTGGGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAVVAQI*VVWGFQ
Trigger: CTGGAACCCCCACACCACCCATATTTGAGCAACTAC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGACTGTGTTCATTCTaGTTGAGGATGCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGLCSF*LRMLTL
Trigger: GAGGGTCAGCATCCTCAACCAGAATGAACACAGTCC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCAGAAAAGGTGTAGCTaGGACACTGTTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGQKRCS*DTVLCP
Trigger: TGGACAGAGAACAGTGTCCCAGCTACACCTTTTCTG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGATAGTGCCTGTGGTTaGGTCTACGTGGAACAATCC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGDSACG*VYVEQS
Trigger: GGATTGTTCCACGTAGACCCAACCACAGGCACTATC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTCGGGCACTTGGAAGTaGAAAGCTGGTGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGASGTWK*KAGARN
Trigger: ATTTCTGGCACCAGCTTTCCACTTCCAAGTGCCCGA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCAACTCATAGTCCAGTaGGGCAGCCGTAGTGATAAT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGQLIVQ*GSRSDN
Trigger: ATTATCACTACGGCTGCCTCACTGGACTATGAGTTG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAAGCTGCACCATCCACTaGACTCACAGAAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGASCTIH*THRKGV
Trigger: TACACCTTTTCTGTGAGTGCAGTGGATGGTGCAGCT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCTCAATTGTCACTGGTaGCAAAGCAAAGTGTGCACC +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGLNCHW*QSKVCT
Trigger: GGTGCACACTTTGCTTTGGCACCAGTGACAATTGAG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTAGGAGAACCCAGGGCTaGTACCTCCTTCATATTTCT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGARRTQG*YLLHIS
Trigger: AGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGACCTCAATTGTCACTaGTGCCAAAGCAAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGADLNCH*CQSKVC
Trigger: GCACACTTTGCTTTGGCACCAGTGACAATTGAGGTC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTATTTCTCCCCACATTaGACCTGGTCACAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAYFSPH*TWSQVS
Trigger: ACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR TCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTATTAAGGCTCCAGAGTaGGAAATGGCACTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGIKAPE*EMALGS
Trigger: AGAACCAAGTGCCATTTCTCACTCTGGAGCCTTAAT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGAAGTGGAAAGCTGGTaGCAGAAATACAGGGTCATA +
Preference number: 4 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAEVESW*QKYRVI
Trigger: TATGACCCTGTATTTCTGGCACCAGCTTTCCACTTC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAGGGACACATTGACATaGGCAAAGTCACCATCATCT +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGRDTLT*AKSPSS
Trigger: AGATGATGGTGACTTTGCCCATGTCAATGTGTCCCT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR GCA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTTTTGGACCCAGACACTaGCATTACCTTCAGTATGTA +
Preference number: 4 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAFGPRH*HYLQYV
Trigger: TACATACTGAAGGTAATGGCAGTGTCTGGGTCCAAA...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CCA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTAAAGTCCTCTGGAATTaGGGCTCATTATCATTCACA +
Preference number: 4 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGKVLWN*GSLSFT
Trigger: TGTGAATGATAATGAGCCCCAATTCCAGAGGACTTT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp GCAGCAGCGCGGGAGTGGTCTCTCGGTCCAGGCCGCGCGGAGCGCTaGGCGCCCCGGTGCGCGCGTCCAGGCGAAGCGCCGGCACGGGCG +
Preference number: 5 (lower is better)
Translates to: AAAREWSLGPGRAER*APRCARPGEAPARA
Trigger: CGCCCGTGCCGGCGCTTCGCCTGGACGCGCGCACCGGGGCGCTCAGCGCTCCGCGCGGCCTGGACCGAGAGACCACTCCCGCGCTGCTGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GGGGCCGGGGCCGTCGGCGTCCGACGCGCGGAAAGTGTACAGCGCTaGGCCGGGCTCCGGGTTCTCTGGCAGCGCCAGCGCCAGCGGGTC +
Preference number: 5 (lower is better)
Translates to: GAGAVGVRRAESVQR*AGLRVLWQRQRQRV
Trigger: GACCCGCTGGCGCTGGCGCTGCCAGAGAACCCGGAGCCCGGCGCAGCGCTGTACACTTTCCGCGCGTCGGACGCCGACGGCCCCGGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TCCGGGTCCCGGGCTACCACGTGCAGGGCCGCGGGCCCAGGCGGCTaGTCCTCTGGGAGGCGCACGCGTGACGGCGAGGCGAAGACAGGC +
Preference number: 5 (lower is better)
Translates to: SGSRATTCRAAGPGG*SSGRRTRDGEAKTG
Trigger: GCCTGTCTTCGCCTCGCCGTCACGCGTGCGCCTCCCAGAGGACCAGCCGCCTGGGCCCGCGGCCCTGCACGTGGTAGCCCGGGACCCGGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CGACGCGCGGAAAGTGTACAGCGCTGCGCCGGGCTCCGGGTTCTCTaGCAGCGCCAGCGCCAGCGGGTCGCGCGCAAAGGCGGGCGCATG +
Preference number: 5 (lower is better)
Translates to: RRAESVQRCAGLRVL*QRQRQRVARKGGRM
Trigger: CATGCGCCCGCCTTTGCGCGCGACCCGCTGGCGCTGGCGCTGCCAGAGAACCCGGAGCCCGGCGCAGCGCTGTACACTTTCCGCGCGTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp CGGGCCAGCTTCGAAGTCCAGGGGCCGCGCCAGGTACAAGCGCCCTaGGGCCGCATCCAGCGCGAAGGTGCCCTCGGGATCGGCACCGCC +
Preference number: 5 (lower is better)
Translates to: RASFEVQGPRQVQAP*GRIQREGALGIGTA
Trigger: GGCGGTGCCGATCCCGAGGGCACCTTCGCGCTGGATGCGGCCTCAGGGCGCTTGTACCTGGCGCGGCCCCTGGACTTCGAAGCTGGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GCTCCCGTGGTGCTTCCCGCCGGGTCCGGCCCCCACCCCCAGAGGTaGCTGTTCCGCTGCCTGGTGCCCGACTGTCCACCCGCAGGTACA +
Preference number: 5 (lower is better)
Translates to: APVVLPAGSGPHPQR*LFRCLVPDCPPAGT
Trigger: TGTACCTGCGGGTGGACAGTCGGGCACCAGGCAGCGGAACAGCCACCTCTGGGGGTGGGGGCCGGACCCGGCGGGAAGCACCACGGGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp GCGCGAAGGTGCCCTCGGGATCGGCACCGCCCACCAGTGTGTAGGTaGGTGCACCCACACCCGCGGGCTCTGGCGCTGCCACCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: ARRCPRDRHRPPVCR*VHPHPRALALPPSP
Trigger: TGGGCTCGGTGGCAGCGCCAGAGCCCGCGGGTGTGGGTGCACTCACCTACACACTGGTGGGCGGTGCCGATCCCGAGGGCACCTTCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GGGCCGCAGTCCCTCAGCTGCTGTCACCGTCAGCACGACAGGCACTaGTGCCGCTGGGTCCCGCTCTGCGAGATCTGGGGGCGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: GPQSLSCCHRQHDRH*CRWVPLCEIWGRLG
Trigger: GCCGAGCCGCCCCCAGATCTCGCAGAGCGGGACCCAGCGGCACCAGTGCCTGTCGTGCTGACGGTGACAGCAGCTGAGGGACTGCGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp AAACGCGCGCTGCACGACGGCGGCTGGCGTTGGCGGGCCGGTCGGTaGCTTCCACCAGCAGCAGCAGCGCGGGAGTGGTCTCTCGGTCCA +
Preference number: 5 (lower is better)
Translates to: KRALHDGGWRWRAGR*LPPAAAAREWSLGP
Trigger: TGGACCGAGAGACCACTCCCGCGCTGCTGCTGCTGGTGGAAGCCACCGACCGGCCCGCCAACGCCAGCCGCCGTCGTGCAGCGCGCGTTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CCGCCGGGTCCGGCCCCCACCCCCAGAGGTGGCTGTTCCGCTGCCTaGTGCCCGACTGTCCACCCGCAGGTACAGGGCTCCTGTAGTCTG +
Preference number: 5 (lower is better)
Translates to: PPGPAPTPRGGCSAA*CPTVHPQVQGSCSL
Trigger: CAGACTACAGGAGCCCTGTACCTGCGGGTGGACAGTCGGGCACCAGGCAGCGGAACAGCCACCTCTGGGGGTGGGGGCCGGACCCGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CGCTGCCACCGAGCCCAACAGAGAGCCGGGCCGCAGTCCCTCAGCTaGTGTCACCGTCAGCACGACAGGCACTGGTGCCGCTGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: RCHRAQQRAGPQSLS*CHRQHDRHWCRWVP
Trigger: CGGGACCCAGCGGCACCAGTGCCTGTCGTGCTGACGGTGACAGCAGCTGAGGGACTGCGGCCCGGCTCTCTGTTGGGCTCGGTGGCAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp ACCGCCCACCAGTGTGTAGGTGAGTGCACCCACACCCGCGGGCTCTaGCGCTGCCACCGAGCCCAACAGAGAGCCGGGCCGCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: TAHQCVGECTHTRGL*RCHRAQQRAGPQSL
Trigger: GAGGGACTGCGGCCCGGCTCTCTGTTGGGCTCGGTGGCAGCGCCAGAGCCCGCGGGTGTGGGTGCACTCACCTACACACTGGTGGGCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CCGCAGTCCCTCAGCTGCTGTCACCGTCAGCACGACAGGCACTGGTaGCGCTGGGTCCCGCTCTGCGAGATCTGGGGGCGGCTCGGCCAA +
Preference number: 5 (lower is better)
Translates to: PQSLSCCHRQHDRHW*RWVPLCEIWGRLGQ
Trigger: TTGGCCGAGCCGCCCCCAGATCTCGCAGAGCGGGACCCAGCGGCACCAGTGCCTGTCGTGCTGACGGTGACAGCAGCTGAGGGACTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CACCAGTGTGTAGGTGAGTGCACCCACACCCGCGGGCTCTGGCGCTaGCACCGAGCCCAACAGAGAGCCGGGCCGCAGTCCCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HQCVGECTHTRGLWR*HRAQQRAGPQSLSC
Trigger: GCAGCTGAGGGACTGCGGCCCGGCTCTCTGTTGGGCTCGGTGGCAGCGCCAGAGCCCGCGGGTGTGGGTGCACTCACCTACACACTGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GAAGGTGCCCTCGGGATCGGCACCGCCCACCAGTGTGTAGGTGAGTaGACCCACACCCGCGGGCTCTGGCGCTGCCACCGAGCCCAACAG +
Preference number: 5 (lower is better)
Translates to: EGALGIGTAHQCVGE*THTRGLWRCHRAQQ
Trigger: CTGTTGGGCTCGGTGGCAGCGCCAGAGCCCGCGGGTGTGGGTGCACTCACCTACACACTGGTGGGCGGTGCCGATCCCGAGGGCACCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CCGGGTCCGGCCCCCACCCCCAGAGGTGGCTGTTCCGCTGCCTGGTaGCCGACTGTCCACCCGCAGGTACAGGGCTCCTGTAGTCTGGTT +
Preference number: 5 (lower is better)
Translates to: PGPAPTPRGGCSAAW*PTVHPQVQGSCSLV
Trigger: AACCAGACTACAGGAGCCCTGTACCTGCGGGTGGACAGTCGGGCACCAGGCAGCGGAACAGCCACCTCTGGGGGTGGGGGCCGGACCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TCCCTCAGCTGCTGTCACCGTCAGCACGACAGGCACTGGTGCCGCTaGGTCCCGCTCTGCGAGATCTGGGGGCGGCTCGGCCAAGCGAGC +
Preference number: 5 (lower is better)
Translates to: SLSCCHRQHDRHWCR*VPLCEIWGRLGQAS
Trigger: GCTCGCTTGGCCGAGCCGCCCCCAGATCTCGCAGAGCGGGACCCAGCGGCACCAGTGCCTGTCGTGCTGACGGTGACAGCAGCTGAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GGTCACAGGCACTGTGGCACTCCGGGAACCAGGCAGAGGCCCCCGTaGTATCACCTCCAGCCTCAGCTCCCGTGGTGCTTCCCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: GHRHCGTPGTRQRPP*YHLQPQLPWCFPPG
Trigger: ACCCGGCGGGAAGCACCACGGGAGCTGAGGCTGGAGGTGATAGCACGGGGGCCTCTGCCTGGTTCCCGGAGTGCCACAGTGCCTGTGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp AGCCCACGGGTTCCCACATCCTGTACCACCACCCGTAGTCGAAAGTaGCTGGTGCGTGGTGGGGAGCCCCCATCCCGGGCCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPRVPTSCTTTRSRK*LVRGGEPPSRASSS
Trigger: GGAGCTGGAGGCCCGGGATGGGGGCTCCCCACCACGCACCAGCCACTTTCGACTACGGGTGGTGGTACAGGATGTGGGAACCCGTGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CTGGTCCTGCAGCTGCACGTGCACTGTGGCTCGTGCTGCCCGGCCTaGAGCCCCGTGGTCTCGTGCTTCCAGCACCACATCCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: LVLQLHVHCGSCCPA*SPVVSCFQHHIHCS
Trigger: GGAGCAGTGGATGTGGTGCTGGAAGCACGAGACCACGGGGCTCCAGGCCGGGCAGCACGAGCCACAGTGCACGTGCAGCTGCAGGACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGGCCCCCATCTGGTGCTaGGGCCTGCACTTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: GGELGPGGGLPVASHSPRAPIWC*GLHLQD
Trigger: GTCCTGCAAGTGCAGGCCCAAGCACCAGATGGGGGC...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGTAGGCGCCTCGTCGTaGACGTCAGCGACACTGACG +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRVGASS*TSATLT
Trigger: CGTCAGTGTCGCTGACGTCAACGACGAGGCGCCTAC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GTGGTCGTTCTGGTCCTGCAGCTGCACGTGCACTGTGGCTCGTGCTaGCCGGCCTGGAGCCCCGTGGTCTCGTGCTTCCAGCACCACATC +
Preference number: 5 (lower is better)
Translates to: VVVLVLQLHVHCGSC*PAWSPVVSCFQHHI
Trigger: GATGTGGTGCTGGAAGCACGAGACCACGGGGCTCCAGGCCGGGCAGCACGAGCCACAGTGCACGTGCAGCTGCAGGACCAGAACGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp TGTGACAATGTGAAGCTCGGGGCGTGGTCGTTCTGGTCCTGCAGCTaGACGTGCACTGTGGCTCGTGCTGCCCGGCCTGGAGCCCCGTGG +
Preference number: 5 (lower is better)
Translates to: CDNVKLGAWSFWSCS*TCTVARAARPGAPW
Trigger: CCACGGGGCTCCAGGCCGGGCAGCACGAGCCACAGTGCACGTGCAGCTGCAGGACCAGAACGACCACGCCCCGAGCTTCACATTGTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CACGGGTTCCCACATCCTGTACCACCACCCGTAGTCGAAAGTGGCTaGTGCGTGGTGGGGAGCCCCCATCCCGGGCCTCCAGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: HGFPHPVPPPVVESG*CVVGSPHPGPPAPA
Trigger: AGCTGGAGCTGGAGGCCCGGGATGGGGGCTCCCCACCACGCACCAGCCACTTTCGACTACGGGTGGTGGTACAGGATGTGGGAACCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp AGCTGCACGTGCACTGTGGCTCGTGCTGCCCGGCCTGGAGCCCCGTaGTCTCGTGCTTCCAGCACCACATCCACTGCTCCTGACCCGTCA +
Preference number: 5 (lower is better)
Translates to: SCTCTVARAARPGAP*SRASSTTSTAPDPS
Trigger: TGACGGGTCAGGAGCAGTGGATGTGGTGCTGGAAGCACGAGACCACGGGGCTCCAGGCCGGGCAGCACGAGCCACAGTGCACGTGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GCCTGCGTTGGGGACACTGTGCGCATCCCAGGTCGGGGCCCAGCCTaGGCCACAGCTAGATGTGCAGCTCCGTGTCATCAGGTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: ACVGDTVRIPGRGPA*ATARCAAPCHQVAP
Trigger: TGGAGCCACCTGATGACACGGAGCTGCACATCTAGCTGTGGCCCAGGCTGGGCCCCGACCTGGGATGCGCACAGTGTCCCCAACGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGAAGCGACCTGGTGGGTaGTGTGCCTGGACTATGCCC +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRKRPGG*CAWTMP
Trigger: GGGCATAGTCCAGGCACACAACCCACCAGGTCGCTT...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGACACTGGCCAGTGGTaGGAACTGAGGGCACCAGCT +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRDTGQW*ELRAPA
Trigger: AGCTGGTGCCCTCAGTTCCAACCACTGGCCAGTGTC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp AGAACCAGGCCATCGGCACCCCCATCCTCATCTGTGGCCTGCACGTaGCCCAAGCTGTGGCCACGCCGGGCACCTTCGGGCACTTGGAAG +
Preference number: 5 (lower is better)
Translates to: RTRPSAPPSSSVACT*PKLWPRRAPSGTWK
Trigger: CTTCCAAGTGCCCGAAGGTGCCCGGCGTGGCCACAGCTTGGGTCACGTGCAGGCCACAGATGAGGATGGGGGTGCCGATGGCCTGGTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GCAGCACACGCACCCGAGCTACAGCGAAAGCTGGGGGCACTCCACTaGCTGCTCGCACCTCCAGCTCCAACACTGGTCCCAGTAGCTCCC +
Preference number: 5 (lower is better)
Translates to: AAHAPELQRKLGALH*LLAPPAPTLVPVAP
Trigger: GGGAGCTACTGGGACCAGTGTTGGAGCTGGAGGTGCGAGCAGGCAGTGGAGTGCCCCCAGCTTTCGCTGTAGCTCGGGTGCGTGTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCACGCCGCTGCCCTCTaGGGCAGAGATGAAGTACAT +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRHAAAL*GRDEVH
Trigger: ATGTACTTCATCTCTGCCCAAGAGGGCAGCGGCGTG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGCTGACCATTGGTGCCTaGGTCAGGATCCCGAGCAGT +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRLTIGA*VRIPSS
Trigger: ACTGCTCGGGATCCTGACCAAGGCACCAATGGTCAG...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGTCGAGGAGGGCTGCCTaGGTCATGAGCACTCAGTGT +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRSRRAA*VMSTQC
Trigger: ACACTGAGTGCTCATGACCAAGGCAGCCCTCCTCGA...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGATGTGCCAGGAGGGTaGTTCTCACGCAAGAGGACG +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRDVPGG*FSRKRT
Trigger: CGTCCTCTTGCGTGAGAACAACCCTCCTGGCACATC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGTGGGTGCATGGTCATaGACATCGCGCACCGTGATG +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRVGAWS*TSRTVM
Trigger: CATCACGGTGCGCGATGTCAATGACCATGCACCCAC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGGGGATGGTGGGGCGATaGTCATTGGTGTCGATGACC +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRGMVGR*SLVSMT
Trigger: GGTCATCGACACCAATGACAATCGCCCCACCATCCC...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GGTTCTGCCTGTAGGCCACCTCCGTCCTCAGCCCCGATCTCCAGCTaGACCACAGAATTGGCCCGTCTGGCCAAGGGCCAGGCTACTGTC +
Preference number: 5 (lower is better)
Translates to: GSACRPPPSSAPISS*TTELARLAKGQATV
Trigger: GACAGTAGCCTGGCCCTTGGCCAGACGGGCCAATTCTGTGGTGCAGCTGGAGATCGGGGCTGAGGACGGAGGTGGCCTACAGGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299441.5
ENST00000680123.1
CDS CCA 90 bp TCTCGGTCAGTGGCAAAGACTCGGCCCACGCTGGTCCCTGGGGGCTaGTTCTCAGCCACAGCCAGGAAGGTGGGATCCTCAGACAAGCGG +
Preference number: 5 (lower is better)
Translates to: SRSVAKTRPTLVPGG*FSATARKVGSSDKR
Trigger: CCGCTTGTCTGAGGATCCCACCTTCCTGGCTGTGGCTGAGAACCAGCCCCCAGGGACCAGCGTGGGCCGAGTCTTTGCCACTGACCGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CAAGGGAATACAGAACCAGGCCATCGGCACCCCCATCCTCATCTGTaGCCTGCACGTGACCCAAGCTGTGGCCACGCCGGGCACCTTCGG +
Preference number: 5 (lower is better)
Translates to: QGNTEPGHRHPHPHL*PARDPSCGHAGHLR
Trigger: CCGAAGGTGCCCGGCGTGGCCACAGCTTGGGTCACGTGCAGGCCACAGATGAGGATGGGGGTGCCGATGGCCTGGTTCTGTATTCCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGGGTCCAAACATGTaGGAGGGACCTCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: GGELGPGGGLPVASHSPRLGPNM*EGPPPS
Trigger: GGATGGAGGAGGTCCCTCCAACATGTTTGGACCCAG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GCCCCACCATCTCGTGCTTGCACCACCAGTTCATGGACCCGCCGCTaGTCAAAGTCCAGTGGCCGCTCTAACTGCAGCAGCCCCGTGTGT +
Preference number: 5 (lower is better)
Translates to: APPSRACTTSSWTRR*SKSSGRSNCSSPVC
Trigger: ACACACGGGGCTGCTGCAGTTAGAGCGGCCACTGGACTTTGAGCAGCGGCGGGTCCATGAACTGGTGGTGCAAGCACGAGATGGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp TGGTGCCTTGGTCAGGATCCCGAGCAGTCACCCGCACTACAAAGCTaGCAGGCAGCGCAACCTCAGGCAGGGGCTCAGGTCGGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: WCLGQDPEQSPALQS*QAAQPQAGAQVGRA
Trigger: AGCTCTACCGACCTGAGCCCCTGCCTGAGGTTGCGCTGCCTGGCAGCTTTGTAGTGCGGGTGACTGCTCGGGATCCTGACCAAGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GTCGAGCCTGGGTCTCACAGTCCAGGGCATGGGCCAGTCGCAAGGTaGCTGAGCTCTCATCCAGCTCAAAGAGCCCTGATGGGTCGCCTG +
Preference number: 5 (lower is better)
Translates to: VEPGSHSPGHGPVAR*LSSHPAQRALMGRL
Trigger: CAGGCGACCCATCAGGGCTCTTTGAGCTGGATGAGAGCTCAGGCACCTTGCGACTGGCCCATGCCCTGGACTGTGAGACCCAGGCTCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GCCTGCCGGAAGCCCCGCACTGATGTCGCCAATCAGTGTACCCGCTaGCTGCTCCTCATCAATCTGCAAGTCCAGGCTCCCAGCCTGACC +
Preference number: 5 (lower is better)
Translates to: ACRKPRTDVANQCTR*LLLINLQVQAPSLT
Trigger: GGTCAGGCTGGGAGCCTGGACTTGCAGATTGATGAGGAGCAGCCAGCGGGTACACTGATTGGCGACATCAGTGCGGGGCTTCCGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CCCTGGTCACGGTCCAGGGTCCGGGTTGTGCACACATCACCGCTGTaGGCATCAATGCGGAATGGGGGAGATCCGGAGGACCCAAGTCCA +
Preference number: 5 (lower is better)
Translates to: PWSRSRVRVVHTSPL*ASMRNGGDPEDPSP
Trigger: TGGACTTGGGTCCTCCGGATCTCCCCCATTCCGCATTGATGCCCACAGCGGTGATGTGTGCACAACCCGGACCCTGGACCGTGACCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GGCCACCTCCGTCCTCAGCCCCGATCTCCAGCTGCACCACAGAATTaGCCCGTCTGGCCAAGGGCCAGGCTACTGTCAACAGCCCTGATT +
Preference number: 5 (lower is better)
Translates to: GHLRPQPRSPAAPQN*PVWPRARLLSTALI
Trigger: AATCAGGGCTGTTGACAGTAGCCTGGCCCTTGGCCAGACGGGCCAATTCTGTGGTGCAGCTGGAGATCGGGGCTGAGGACGGAGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299441.5
ENST00000680123.1
CDS CCA 90 bp GCAGGCTGTAGGTCAGACGTCCATTGGGTCCTGAGTCTCGGTCAGTaGCAAAGACTCGGCCCACGCTGGTCCCTGGGGGCTGGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: AGCRSDVHWVLSLGQ*QRLGPRWSLGAGSQ
Trigger: CTGAGAACCAGCCCCCAGGGACCAGCGTGGGCCGAGTCTTTGCCACTGACCGAGACTCAGGACCCAATGGACGTCTGACCTACAGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CACAATGGCTGTCAGCGCACCTGCCACACATGGCTTGCCATCTGCTaGGAAGCCATAGTCCCCAGTGGGTGCAGGGCTCAGGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: HNGCQRTCHTWLAIC*EAIVPSGCRAQATA
Trigger: GGCTGTGGCCTGAGCCCTGCACCCACTGGGGACTATGGCTTCCCAGCAGATGGCAAGCCATGTGTGGCAGGTGCGCTGACAGCCATTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGAGGAAACGGGGAGCATaGTCGTTGGCATCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: GGELGPGGGLPVASHSPRRKRGA*SLASCR
Trigger: CCTGCAAGATGCCAACGACAATGCTCCCCGTTTCCT...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGAACAGGGTCCCATTGTaGGGGTCAACACTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRNRVPL*GSTLKP
Trigger: TGGCTTCAGTGTTGACCCCAACAATGGGACCCTGTT...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGATCCTCGGCCACTaGAATGTGAAGGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: GGELGPGGGLPVASHSPRLILGH*NVKGPR
Trigger: CCTTGGACCCTTCACATTCAAGTGGCCGAGGATCAG...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp GCATCTCGCACATGCACAGTCACAAAGGCCGAGCCCAGCTCAGGGTaGGCCCCACCATCTCGTGCTTGCACCACCAGTTCATGGACCCGC +
Preference number: 5 (lower is better)
Translates to: ASRTCTVTKAEPSSG*APPSRACTTSSWTR
Trigger: GCGGGTCCATGAACTGGTGGTGCAAGCACGAGATGGTGGGGCTCACCCTGAGCTGGGCTCGGCCTTTGTGACTGTGCATGTGCGAGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp TGCTTGGGCCTGCACTTGCAGGACCTGAGTTCCAGCAGTGGTGCCTaGGGGCAGGTCCACACGGTAGGTAGGGCTGTTGAATCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: CLGLHLQDLSSSSGA*GQVHTVGRAVESGS
Trigger: GCTCCCCGATTCAACAGCCCTACCTACCGTGTGGACCTGCCCTCAGGCACCACTGCTGGAACTCAGGTCCTGCAAGTGCAGGCCCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp CACCAGTGGCAGAGCGAGCTGGACGGCCAAGATCAGTGGCCACAATaGAGAGGACACGATCTCGGGGGCCTAGAGCTACAGGAGAGCGGG +
Preference number: 5 (lower is better)
Translates to: HQWQSELDGQDQWPQ*RGHDLGGLELQESG
Trigger: CCCGCTCTCCTGTAGCTCTAGGCCCCCGAGATCGTGTCCTCTTCATTGTGGCCACTGATCTTGGCCGTCCAGCTCGCTCTGCCACTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp AGCCCTGATGGGTCGCCTGAGCTGACAGTGAAACGCACGAGGCCATaGGGGCCAGGGTCAGCGTCAGAGGCCTCTACATGCAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SPDGSPELTVKRTRP*GPGSASEASTCSSS
Trigger: TGAGCTGCTGCATGTAGAGGCCTCTGACGCTGACCCTGGCCCTCATGGCCTCGTGCGTTTCACTGTCAGCTCAGGCGACCCATCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp ATGGCAGCTGAGGACAGGGAGCCTTCATGGCTGATGGGGGAGCGGTaGGAAGCTGGTGGGAAGATGGCCCGGGCTGCAGCTGTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: MAAEDREPSWLMGER*EAGGKMARAAAVFA
Trigger: AGCAAACACAGCTGCAGCCCGGGCCATCTTCCCACCAGCTTCTCACCGCTCCCCCATCAGCCATGAAGGCTCCCTGTCCTCAGCTGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CACGCCGCTGCCCTCTTGGGCAGAGATGAAGTACATGAGAGGAGCTaGCGTGCCTGCCGGAAGCCCCGCACTGATGTCGCCAATCAGTGT +
Preference number: 5 (lower is better)
Translates to: HAAALLGRDEVHERS*RACRKPRTDVANQC
Trigger: ACACTGATTGGCGACATCAGTGCGGGGCTTCCGGCAGGCACGGCAGCTCCTCTCATGTACTTCATCTCTGCCCAAGAGGGCAGCGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp AGTTCATGGACCCGCCGCTGCTCAAAGTCCAGTGGCCGCTCTAACTaGAGCAGCCCCGTGTGTGCGTCGATGGAGAAGGGTCCATCACCC +
Preference number: 5 (lower is better)
Translates to: SSWTRRCSKSSGRSN*SSPVCASMEKGPSP
Trigger: GGGTGATGGACCCTTCTCCATCGACGCACACACGGGGCTGCTGCAGTTAGAGCGGCCACTGGACTTTGAGCAGCGGCGGGTCCATGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CCCACTCTGTGGCTCCAGGCCAAAGGGGCTACTTGCTCCCTCTGCTaGAAGGTGATAGGTGATAGGGCCCCCATCTGGTGCTTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PTLWLQAKGATCSLC*KVIGDRAPIWCLGL
Trigger: CAGGCCCAAGCACCAGATGGGGGCCCTATCACCTATCACCTTGCAGCAGAGGGAGCAAGTAGCCCCTTTGGCCTGGAGCCACAGAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CCACCCACTCTGTGGCTCCAGGCCAAAGGGGCTACTTGCTCCCTCTaGTGCAAGGTGATAGGTGATAGGGCCCCCATCTGGTGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PPTLWLQAKGATCSL*CKVIGDRAPIWCLG
Trigger: GCCCAAGCACCAGATGGGGGCCCTATCACCTATCACCTTGCAGCAGAGGGAGCAAGTAGCCCCTTTGGCCTGGAGCCACAGAGTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GGGGTGGGCTCCCTCCATCCTGCACCTGCACCAGGAGCTGATAGCTaGTCTGCTGCTCACGGTCCAGGGTTTGGAGTGTGGTCACTTCTC +
Preference number: 5 (lower is better)
Translates to: GVGSLHPAPAPGADS*SAAHGPGFGVWSLL
Trigger: GAGAAGTGACCACACTCCAAACCCTGGACCGTGAGCAGCAGAGCAGCTATCAGCTCCTGGTGCAGGTGCAGGATGGAGGGAGCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GAAGCACCTGCACCAGCAGCTGGAGGCTGGCACTTCGAGGAGGGCTaGCTTGGTCATGAGCACTCAGTGTCAGCACATAGTGGGGCCGCT +
Preference number: 5 (lower is better)
Translates to: EAPAPAAGGWHFEEG*LGHEHSVSAHSGAA
Trigger: AGCGGCCCCACTATGTGCTGACACTGAGTGCTCATGACCAAGGCAGCCCTCCTCGAAGTGCCAGCCTCCAGCTGCTGGTGCAGGTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CTCCTCTCTGTAGAGAGTGGCTCCTGCACCTGGCAGCAGCAGCCCTaGCTTTCGGCCCTTATACCAGGTGTCAGGGGCAGGTGGTTCGCA +
Preference number: 5 (lower is better)
Translates to: LLSVESGSCTWQQQP*LSALIPGVRGRWFA
Trigger: TGCGAACCACCTGCCCCTGACACCTGGTATAAGGGCCGAAAGGCAGGGCTGCTGCTGCCAGGTGCAGGAGCCACTCTCTACAGAGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GTTGGAACTGAGGGCACCAGCTCAGCAGGTAGTCCCAGTTATAGCTaGCACGGAGCTCCTCCTCGCCGGCCACAATGGCTGTCAGCGCAC +
Preference number: 5 (lower is better)
Translates to: VGTEGTSSAGSPSYS*HGAPPRRPQWLSAH
Trigger: GTGCGCTGACAGCCATTGTGGCCGGCGAGGAGGAGCTCCGTGGCAGCTATAACTGGGACTACCTGCTGAGCTGGTGCCCTCAGTTCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CTGTGTTCGTCAATGGCCAGGTCTGTGCCCACGCCGCTGCCCTCTTaGGCAGAGATGAAGTACATGAGAGGAGCTGCCGTGCCTGCCGGA +
Preference number: 5 (lower is better)
Translates to: LCSSMARSVPTPLPS*AEMKYMRGAAVPAG
Trigger: TCCGGCAGGCACGGCAGCTCCTCTCATGTACTTCATCTCTGCCCAAGAGGGCAGCGGCGTGGGCACAGACCTGGCCATTGACGAACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GCGGTTCTCTCGGTCCAGTTCCCCAGTAACTACCAGCTCAGGTACTaGAGTCCCATCTGGACCGGGGCGTGTCTCCAGCCGGAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: AVLSVQFPSNYQLRY*SPIWTGACLQPEGL
Trigger: GAGACCTTCCGGCTGGAGACACGCCCCGGTCCAGATGGGACTCCAGTACCTGAGCTGGTAGTTACTGGGGAACTGGACCGAGAGAACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CCCCCATCCACAGCTGTCACTGTGAAGTCAAAGCTTGAGGGCCCCTaGTCACGGTCCAGGGTCCGGGTTGTGCACACATCACCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PPSTAVTVKSKLEGP*SRSRVRVVHTSPLW
Trigger: CCACAGCGGTGATGTGTGCACAACCCGGACCCTGGACCGTGACCAGGGGCCCTCAAGCTTTGACTTCACAGTGACAGCTGTGGATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TTGGCTCCCACATCTGGATCAGAGGCCCGAAGCATGGTAAGGGTCTaGGGGTCCTGGCCCTCAGGCACCTCCAGAGAGAGATGGGCACTC +
Preference number: 5 (lower is better)
Translates to: LAPTSGSEARSMVRV*GSWPSGTSRERWAL
Trigger: GAGTGCCCATCTCTCTCTGGAGGTGCCTGAGGGCCAGGACCCCCAGACCCTTACCATGCTTCGGGCCTCTGATCCAGATGTGGGAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GCACTGAGAGCTGGCTGGCCTCCATCCCGGGCCTCTATCCTCAGCTaGAAAGCTGGCTCCACTTCTCTGTCTAGTGGCCGCATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: ALRAGWPPSRASILS*KAGSTSLSSGRMVP
Trigger: TGGCACCATGCGGCCACTAGACAGAGAAGTGGAGCCAGCTTTCCAGCTGAGGATAGAGGCCCGGGATGGAGGCCAGCCAGCTCTCAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CGGGGCAGACGTAGGCGCAGAGGACTGGTGGGGAAGGTGGGTGCATaGTCATTGACATCGCGCACCGTGATGGTGACAGACACTGTGGTG +
Preference number: 5 (lower is better)
Translates to: RGRRRRRGLVGKVGA*SLTSRTVMVTDTVV
Trigger: CACCACAGTGTCTGTCACCATCACGGTGCGCGATGTCAATGACCATGCACCCACCTTCCCCACCAGTCCTCTGCGCCTACGTCTGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTCGGTCCGCGCGCCCTaGGCCGTCGATCGGTCCGTC +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGSVRAP*AVDRSV
Trigger: GACGGACCGATCGACGGCCAAGGGCGCGCGGACCGA...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGCTGCCCAGGACACGGGGGAACTCATaGATCATGCGGATCTCATCA +
Preference number: 5 (lower is better)
Translates to: LGPGGGLPVASHSPRLPRTRGNS*IMRISS
Trigger: TGATGAGATCCGCATGATCAATGAGTTCCCCCGTGT...CCTGGGCAGCCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp GGGGCGATTGTCATTGGTGTCGATGACCATCACCGTCAAGGTAGCTaGGCCCACCAGGGCTGGGCTCCCTCTGTCTGTGGCCATCAGCAC +
Preference number: 5 (lower is better)
Translates to: GAIVIGVDDHHRQGS*AHQGWAPSVCGHQH
Trigger: GTGCTGATGGCCACAGACAGAGGGAGCCCAGCCCTGGTGGGCTCAGCTACCTTGACGGTGATGGTCATCGACACCAATGACAATCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp AGTGGAGCCAGGGGGCAGGTCTTCAGTCACAGCCACACGGTAGTGTaGCAATGTGAAGCTCGGGGCGTGGTCGTTCTGGTCCTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SGARGQVFSHSHTVV*QCEARGVVVLVLQL
Trigger: CAGCTGCAGGACCAGAACGACCACGCCCCGAGCTTCACATTGTCACACTACCGTGTGGCTGTGACTGAAGACCTGCCCCCTGGCTCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp AGTCAAAGCTTGAGGGCCCCTGGTCACGGTCCAGGGTCCGGGTTGTaGACACATCACCGCTGTGGGCATCAATGCGGAATGGGGGAGATC +
Preference number: 5 (lower is better)
Translates to: SQSLRAPGHGPGSGL*THHRCGHQCGMGEI
Trigger: GATCTCCCCCATTCCGCATTGATGCCCACAGCGGTGATGTGTGCACAACCCGGACCCTGGACCGTGACCAGGGGCCCTCAAGCTTTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GGGATCCCTGGTCAGGGTCATGGGCACGCAACCTCAGCACAGCTGTaGCTGGTGGACTCTGGGCACTTATACTGGCAGCATACTCCCGTG +
Preference number: 5 (lower is better)
Translates to: GIPGQGHGHATSAQL*LVDSGHLYWQHTPV
Trigger: CACGGGAGTATGCTGCCAGTATAAGTGCCCAGAGTCCACCAGGCACAGCTGTGCTGAGGTTGCGTGCCCATGACCCTGACCAGGGATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp TGCTCCCTCTGCTGCAAGGTGATAGGTGATAGGGCCCCCATCTGGTaGTTGGGCCTGCACTTGCAGGACCTGAGTTCCAGCAGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: CSLCCKVIGDRAPIW*LGLHLQDLSSSSGA
Trigger: GGCACCACTGCTGGAACTCAGGTCCTGCAAGTGCAGGCCCAAGCACCAGATGGGGGCCCTATCACCTATCACCTTGCAGCAGAGGGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GAGATGCGAGCAACGAGCTGTCCAGGTGGGGCGGCCTCAGACACTTaGGGGGAGCCATCTGCACTGAGAAAGATGACAGTCATGGAGGGC +
Preference number: 5 (lower is better)
Translates to: EMRATSCPGGAASDT*GEPSALRKMTVMEG
Trigger: GCCCTCCATGACTGTCATCTTTCTCAGTGCAGATGGCTCCCCCCAAGTGTCTGAGGCCGCCCCACCTGGACAGCTCGTTGCTCGCATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CGTCCTCAGCCCCGATCTCCAGCTGCACCACAGAATTGGCCCGTCTaGCCAAGGGCCAGGCTACTGTCAACAGCCCTGATTGCTCATCCA +
Preference number: 5 (lower is better)
Translates to: RPQPRSPAAPQNWPV*PRARLLSTALIAHP
Trigger: TGGATGAGCAATCAGGGCTGTTGACAGTAGCCTGGCCCTTGGCCAGACGGGCCAATTCTGTGGTGCAGCTGGAGATCGGGGCTGAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299441.5
ENST00000680123.1
CDS CCA 90 bp ATTCACATCATCCAGCAGCACACGCACCCGAGCTACAGCGAAAGCTaGGGGCACTCCACTGCCTGCTCGCACCTCCAGCTCCAACACTGG +
Preference number: 5 (lower is better)
Translates to: IHIIQQHTHPSYSES*GHSTACSHLQLQHW
Trigger: CCAGTGTTGGAGCTGGAGGTGCGAGCAGGCAGTGGAGTGCCCCCAGCTTTCGCTGTAGCTCGGGTGCGTGTGCTGCTGGATGATGTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TCCAGCACTGTCACTGTCAAAAGCAGCGTGGCACTGAGAGCTGGCTaGCCTCCATCCCGGGCCTCTATCCTCAGCTGGAAAGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSTVTVKSSVALRAG*PPSRASILSWKAGS
Trigger: GGAGCCAGCTTTCCAGCTGAGGATAGAGGCCCGGGATGGAGGCCAGCCAGCTCTCAGTGCCACGCTGCTTTTGACAGTGACAGTGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GGCATCCAGCACTGTCACTGTCAAAAGCAGCGTGGCACTGAGAGCTaGCTGGCCTCCATCCCGGGCCTCTATCCTCAGCTGGAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: GIQHCHCQKQRGTES*LASIPGLYPQLESW
Trigger: CCAGCTTTCCAGCTGAGGATAGAGGCCCGGGATGGAGGCCAGCCAGCTCTCAGTGCCACGCTGCTTTTGACAGTGACAGTGCTGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp CCCTCTCCTCTCGATCCAGCCGCCGAGCCACACACACCAGATAGATaGCGCTGTCTTGGGTGCTTAGGGCAAAGTGGCCCTCTCCACCTT +
Preference number: 5 (lower is better)
Translates to: PSPLDPAAEPHTPDR*RCLGCLGQSGPLHL
Trigger: AAGGTGGAGAGGGCCACTTTGCCCTAAGCACCCAAGACAGCGTCATCTATCTGGTGTGTGTGGCTCGGCGGCTGGATCGAGAGGAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp TTCAGACAGCTGTTGCAGGCTGTAGGTCAGACGTCCATTGGGTCCTaGGTCTCGGTCAGTGGCAAAGACTCGGCCCACGCTGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: FRQLLQAVGQTSIGS*VSVSGKDSAHAGPW
Trigger: CCAGGGACCAGCGTGGGCCGAGTCTTTGCCACTGACCGAGACTCAGGACCCAATGGACGTCTGACCTACAGCCTGCAACAGCTGTCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp GGTCATTGGCATCCAGCACTGTCACTGTCAAAAGCAGCGTGGCACTaGGAGCTGGCTGGCCTCCATCCCGGGCCTCTATCCTCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: GHWHPALSLSKAAWH*ELAGLHPGPLSSAG
Trigger: TCCAGCTGAGGATAGAGGCCCGGGATGGAGGCCAGCCAGCTCTCAGTGCCACGCTGCTTTTGACAGTGACAGTGCTGGATGCCAATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp GGGGAGCATTGTCGTTGGCATCTTGCAGGGTCAGGGTCAGCACAGTaGAGGCAAAGGCTCCTCCACTCTCTGCCTGCAGCACCAGTCGCA +
Preference number: 5 (lower is better)
Translates to: GEHCRWHLAGSGSAQ*RQRLLHSLPAAPVA
Trigger: TGCGACTGGTGCTGCAGGCAGAGAGTGGAGGAGCCTTTGCCTTCACTGTGCTGACCCTGACCCTGCAAGATGCCAACGACAATGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp ATCGGCAGGGGAAGCCAGGTGGTAGGAAATGTGACCGTTGGCACCTaGGTCCCGATCAGTGGCAGAGACGGAGAGAATGGCACTGCCTGG +
Preference number: 5 (lower is better)
Translates to: IGRGSQVVGNVTVGT*VPISGRDGENGTAW
Trigger: CCAGGCAGTGCCATTCTCTCCGTCTCTGCCACTGATCGGGACTCAGGTGCCAACGGTCACATTTCCTACCACCTGGCTTCCCCTGCCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp TGGAGCCCCGTGGTCTCGTGCTTCCAGCACCACATCCACTGCTCCTaGCCCGTCATGGCCCAAGGCCACTGTTCCCACTATTGTGAACAG +
Preference number: 5 (lower is better)
Translates to: WSPVVSCFQHHIHCS*PVMAQGHCSHYCEQ
Trigger: CTGTTCACAATAGTGGGAACAGTGGCCTTGGGCCATGACGGGTCAGGAGCAGTGGATGTGGTGCTGGAAGCACGAGACCACGGGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp TGTGTGCTCATAGTCAAAGGGCACTCGCGCACGCAACTCCCCTGTTaGGCTGTTCAGTGCAAATGCCTCACGGCCCTCAGGTCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: CVLIVKGHSRTQLPC*AVQCKCLTALRSWP
Trigger: GGGCCAGGACCTGAGGGCCGTGAGGCATTTGCACTGAACAGCTCAACAGGGGAGTTGCGTGCGCGAGTGCCCTTTGACTATGAGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp AGCCACTCGCACTGTAACTTCTACGGTGGCACCATCAGGAGTGACTaGAGTGAAGCGGTAGCGGTCCCGCTGCTCACGGTCCAAGACACG +
Preference number: 5 (lower is better)
Translates to: SHSHCNFYGGTIRSD*SEAVAVPLLTVQDT
Trigger: CGTGTCTTGGACCGTGAGCAGCGGGACCGCTACCGCTTCACTGCAGTCACTCCTGATGGTGCCACCGTAGAAGTTACAGTGCGAGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CTCAGGCAGGGGCTCAGGTCGGTAGAGCTGGCGGTCAAAGGCAGGTaGATTGTCGTTGACATCAGTGACGTGCAGCACAAAGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LRQGLRSVELAVKGR*IVVDISDVQHKGSL
Trigger: GAGGCTGCCTTTGTGCTGCACGTCACTGATGTCAACGACAATGCACCTGCCTTTGACCGCCAGCTCTACCGACCTGAGCCCCTGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp ATTCCCACTGAGAATGCTGTAGGTGATGGGTCCATTTGTGCCTCCTaGATGGACGGCCCTGGGGGAGACAATAGGAGTCCCTGGGGGCGC +
Preference number: 5 (lower is better)
Translates to: IPTENAVGDGSICAS*MDGPGGDNRSPWGR
Trigger: GCGCCCCCAGGGACTCCTATTGTCTCCCCCAGGGCCGTCCATGCAGGAGGCACAAATGGACCCATCACCTACAGCATTCTCAGTGGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CACAAGCACTGTGAGGTTGGCACGGCCCTCATGAGGCCCATCATGTaGCAGCAGCTGCAGCTGGTAGCGGTCACACTGCTCAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: HKHCEVGTALMRPIM*QQLQLVAVTLLKVQ
Trigger: CTGGACTTTGAGCAGTGTGACCGCTACCAGCTGCAGCTGCTGGCACATGATGGGCCTCATGAGGGCCGTGCCAACCTCACAGTGCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TCAGGTACCTGCAGGGCAGCCCGAGCCTGTGGGAAGGCTGGAGCATaGTCGTTGATGTCAGCCACTCGCACTGTAACTTCTACGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SGTCRAARACGKAGA*SLMSATRTVTSTVA
Trigger: TGCCACCGTAGAAGTTACAGTGCGAGTGGCTGACATCAACGACCATGCTCCAGCCTTCCCACAGGCTCGGGCTGCCCTGCAGGTACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp GGTGGAGAGCTGGGGCCTGGTGGTGGCCTCCCCGTAGCCAGTCATAGTCCGAGGTACAGAATGGAAGCATaGGCACCAGCATCACGATCT +
Preference number: 5 (lower is better)
Translates to: GGELGPGGGLPVASHSPRYRMEA*APASRS
Trigger: AGATCGTGATGCTGGTGCCAATGCTTCCATTCTGTA...CCTCGGACTATGACTGGCTACGGGGAGGCCACCACCAGGCCCCAGCTCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGGGGCTGCCTCAGCCTaGCGGCTACGGGCCCGAACA +
Preference number: 5 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAGAASA*RLRART
Trigger: TGTTCGGGCCCGTAGCCGCAAGGCTGAGGCAGCCCC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp AAAGCAAAGTGTGCACCAGCAGGGTCAGCAGCCTGTACTACAAGCTaGTGTCGAGCCTGGGTCTCACAGTCCAGGGCATGGGCCAGTCGC +
Preference number: 5 (lower is better)
Translates to: KAKCAPAGSAACTTS*CRAWVSQSRAWASR
Trigger: GCGACTGGCCCATGCCCTGGACTGTGAGACCCAGGCTCGACATCAGCTTGTAGTACAGGCTGCTGACCCTGCTGGTGCACACTTTGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp TCCCCGTCGATTGCATGCAGAGTGGTCACGAGAGTGCCTGGAGGCTaGTTCTCGGCCACGCTGGTGCTGAGTAAGTTCAGTGGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SPSIACRVVTRVPGG*FSATLVLSKFSGKA
Trigger: AGCCTTCCCACTGAACTTACTCAGCACCAGCGTGGCCGAGAATCAGCCTCCAGGCACTCTCGTGACCACTCTGCATGCAATCGACGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp CCGCGTCTGTGGCTGTCACCTGCAGGAAGCAAGTTCCAGGCTGGGTaGCCTCAGGCAGTGAGGCATTGTAGAAAGTCCTCTGGAATTGGG +
Preference number: 5 (lower is better)
Translates to: PRLWLSPAGSKFQAG*PQAVRHCRKSSGIG
Trigger: CCCAATTCCAGAGGACTTTCTACAATGCCTCACTGCCTGAGGGCACCCAGCCTGGAACTTGCTTCCTGCAGGTGACAGCCACAGACGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp ACTTGCTCCCTCTGCTGCAAGGTGATAGGTGATAGGGCCCCCATCTaGTGCTTGGGCCTGCACTTGCAGGACCTGAGTTCCAGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: TCSLCCKVIGDRAPI*CLGLHLQDLSSSSG
Trigger: ACCACTGCTGGAACTCAGGTCCTGCAAGTGCAGGCCCAAGCACCAGATGGGGGCCCTATCACCTATCACCTTGCAGCAGAGGGAGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TGCCAGGAGGTGGTGTGCCTGCCAGCCGGTACAGAATGGAAGCATTaGCACCAGCATCACGATCTTCAGCTCTCAGTGTGGCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: CQEVVCLPAGTEWKH*HQHHDLQLSVWPEP
Trigger: TGGCTCTGGCCACACTGAGAGCTGAAGATCGTGATGCTGGTGCCAATGCTTCCATTCTGTACCGGCTGGCAGGCACACCACCTCCTGGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GATCTCACGGTCCAGGATGGCTGTGGTAGTGATAGTGCCTGTGGTTaGGTCTACGTGGAACAATCCACGTGCCGGCTGGGATGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: DLTVQDGCGSDSACG*VYVEQSTCRLGCSQ
Trigger: CTGGCTGCATCCCAGCCGGCACGTGGATTGTTCCACGTAGACCCAACCACAGGCACTATCACTACCACAGCCATCCTGGACCGTGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CAGCAGCCCTGCCTTTCGGCCCTTATACCAGGTGTCAGGGGCAGGTaGTTCGCAGGATGTGTCACTCAGACCATCTGCATCCTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: QQPCLSALIPGVRGR*FAGCVTQTICILLD
Trigger: ATCCAGCAGGATGCAGATGGTCTGAGTGACACATCCTGCGAACCACCTGCCCCTGACACCTGGTATAAGGGCCGAAAGGCAGGGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTACGTGCTCAGCTCGTaGTTCGCGGTCCAACGGCCG +
Preference number: 5 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPYVLSS*FAVQRP
Trigger: CGGCCGTTGGACCGCGAACAACGAGCTGAGCACGTA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGGCCGAGCTTCATCCTaGAGCCGAGCGATCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLGRASS*SRAISV
Trigger: CACAGAGATCGCTCGGCTCAAGGATGAAGCTCGGCC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp GTAGTTGCTCAAATATGGGTGGTGTGGGGGTTCCAGGCACAATGCTaGTGTCCACTCGGGCACTGGGTTCTGCCTGTAGGCCACCTCCGT +
Preference number: 5 (lower is better)
Translates to: VVAQIWVVWGFQAQC*CPLGHWVLPVGHLR
Trigger: ACGGAGGTGGCCTACAGGCAGAACCCAGTGCCCGAGTGGACATCAGCATTGTGCCTGGAACCCCCACACCACCCATATTTGAGCAACTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299441.5
ENST00000680123.1
CDS TCA 90 bp ACCACCCCCAGCAAGCAGGGTAAAGGTGACTCGACTGTTAACACCTaGGTCGGGGTCAAGAGCCCGCAGTGTATAGATGGGAGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: TTPSKQGKGDSTVNT*VGVKSPQCIDGSPW
Trigger: CCAGGGACTCCCATCTATACACTGCGGGCTCTTGACCCCGACTCAGGTGTTAACAGTCGAGTCACCTTTACCCTGCTTGCTGGGGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GATCTCGTAAGTCACAGCCCCATTGACACCAGCATCGGCATCAGATaGGAACACCTGCAAGACAGGACTGCCAGGGGCCAGGCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: DLVSHSPIDTSIGIR*EHLQDRTARGQALR
Trigger: TCTGAGAGCCTGGCCCCTGGCAGTCCTGTCTTGCAGGTGTTCGCATCTGATGCCGATGCTGGTGTCAATGGGGCTGTGACTTACGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp TCCAACACTGGTCCCAGTAGCTCCCGGTCCAGAGGGCGAAGTGTTTaGAACAGTCCTGATACCGCATCTAGGGAGAAGAGTCCTCGGGGA +
Preference number: 5 (lower is better)
Translates to: SNTGPSSSRSRGRSV*NSPDTASREKSPRG
Trigger: TCCCCGAGGACTCTTCTCCCTAGATGCGGTATCAGGACTGTTGCAAACACTTCGCCCTCTGGACCGGGAGCTACTGGGACCAGTGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GGAGTGTGGTCACTTCTCCAGTCTGGGGGTGGATGCGGAAGGCCTTaGTGTCTTCAGACAGCTGTTGCAGGCTGTAGGTCAGACGTCCAT +
Preference number: 5 (lower is better)
Translates to: GVWSLLQSGGGCGRP*CLQTAVAGCRSDVH
Trigger: ATGGACGTCTGACCTACAGCCTGCAACAGCTGTCTGAAGACAGCAAGGCCTTCCGCATCCACCCCCAGACTGGAGAAGTGACCACACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GCCTGTGGTTGGGTCTACGTGGAACAATCCACGTGCCGGCTGGGATaGAGCCAGACTGTAGGAAATCTGTCCTCCAGAGCCTTGATCCAG +
Preference number: 5 (lower is better)
Translates to: ACGWVYVEQSTCRLG*SQTVGNLSSRALIQ
Trigger: CTGGATCAAGGCTCTGGAGGACAGATTTCCTACAGTCTGGCTGCATCCCAGCCGGCACGTGGATTGTTCCACGTAGACCCAACCACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TGTATGCTCAGGTACCTGCAGGGCAGCCCGAGCCTGTGGGAAGGCTaGAGCATGGTCGTTGATGTCAGCCACTCGCACTGTAACTTCTAC +
Preference number: 5 (lower is better)
Translates to: CMLRYLQGSPSLWEG*SMVVDVSHSHCNFY
Trigger: GTAGAAGTTACAGTGCGAGTGGCTGACATCAACGACCATGCTCCAGCCTTCCCACAGGCTCGGGCTGCCCTGCAGGTACCTGAGCATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp CACGCGGATTTCACCAGTGTAAGAGTCCACAGTAGTGCCAGGAGGTaGTGTGCCTGCCAGCCGGTACAGAATGGAAGCATTGGCACCAGC +
Preference number: 5 (lower is better)
Translates to: HADFTSVRVHSSARR*CACQPVQNGSIGTS
Trigger: GCTGGTGCCAATGCTTCCATTCTGTACCGGCTGGCAGGCACACCACCTCCTGGCACTACTGTGGACTCTTACACTGGTGAAATCCGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TGGTCTCGTGCTTCCAGCACCACATCCACTGCTCCTGACCCGTCATaGCCCAAGGCCACTGTTCCCACTATTGTGAACAGGGTCCCATTG +
Preference number: 5 (lower is better)
Translates to: WSRASSTTSTAPDPS*PKATVPTIVNRVPL
Trigger: CAATGGGACCCTGTTCACAATAGTGGGAACAGTGGCCTTGGGCCATGACGGGTCAGGAGCAGTGGATGTGGTGCTGGAAGCACGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGCTGGAGCATGGTCGTaGATGTCAGCCACTCGCACT +
Preference number: 5 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLAGAWS*MSATRT
Trigger: AGTGCGAGTGGCTGACATCAACGACCATGCTCCAGC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTGCTTGGGCCTGCACTaGCAGGACCTGAGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPCLGLH*QDLSSS
Trigger: GCTGGAACTCAGGTCCTGCAAGTGCAGGCCCAAGCA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGGCACCTTCGGGCACTaGGAAGTGGAAAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPGTFGH*EVESWC
Trigger: GCACCAGCTTTCCACTTCCAAGTGCCCGAAGGTGCC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAAGAGTGGGGCCTGCGTaGGGGACACTGTGCGCATCC +
Preference number: 5 (lower is better)
Translates to: IPLPPINKVSAPSQGAGARVGPA*GTLCAS
Trigger: GGATGCGCACAGTGTCCCCAACGCAGGCCCCACTCT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp TTCTGGTTGAGGATGCTGACCCTCACGGTGGCTGTGCCTGTCTGCTaGCCCAACTCAGCTTTGGACCCAGACACTGCCATTACCTTCAGT +
Preference number: 5 (lower is better)
Translates to: FWLRMLTLTVAVPVC*PNSALDPDTAITFS
Trigger: ACTGAAGGTAATGGCAGTGTCTGGGTCCAAAGCTGAGTTGGGGCAGCAGACAGGCACAGCCACCGTGAGGGTCAGCATCCTCAACCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp TCATTCTGGTTGAGGATGCTGACCCTCACGGTGGCTGTGCCTGTCTaGTGCCCCAACTCAGCTTTGGACCCAGACACTGCCATTACCTTC +
Preference number: 5 (lower is better)
Translates to: SFWLRMLTLTVAVPV*CPNSALDPDTAITF
Trigger: GAAGGTAATGGCAGTGTCTGGGTCCAAAGCTGAGTTGGGGCAGCAGACAGGCACAGCCACCGTGAGGGTCAGCATCCTCAACCAGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TTCCCCCTGCAGTCCAACAATGATCACACCAGTGGCAGAGCGAGCTaGACGGCCAAGATCAGTGGCCACAATGAAGAGGACACGATCTCG +
Preference number: 5 (lower is better)
Translates to: FPLQSNNDHTSGRAS*TAKISGHNEEDTIS
Trigger: CGAGATCGTGTCCTCTTCATTGTGGCCACTGATCTTGGCCGTCCAGCTCGCTCTGCCACTGGTGTGATCATTGTTGGACTGCAGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TCTGAGCCCAATAACGCATCTTCTGACACTCGGAGCTCCCAGGGTTaGGGGATGGTGGGGCGATTGTCATTGGTGTCGATGACCATCACC +
Preference number: 5 (lower is better)
Translates to: SEPNNASSDTRSSQG*GMVGRLSLVSMTIT
Trigger: GGTGATGGTCATCGACACCAATGACAATCGCCCCACCATCCCCCAACCCTGGGAGCTCCGAGTGTCAGAAGATGCGTTATTGGGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGCCGGGGCATGGTCATaGATGTCCAGCAGTGTCACG +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGAGAWS*MSSSVT
Trigger: CGTGACACTGCTGGACATCAATGACCATGCCCCGGC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGGTCCAGGGTCCGGGTaGTGCACACATCACCGCTGT +
Preference number: 5 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGGPGSG*CTHHRC
Trigger: ACAGCGGTGATGTGTGCACAACCCGGACCCTGGACC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTAGCTGCACCACAGAATaGGCCCGTCTGGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: SSIPLPPINKVSAPSQGASCTTE*ARLAKG
Trigger: GCCCTTGGCCAGACGGGCCAATTCTGTGGTGCAGCT...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATCCCTGGGGCAGTGTTaGGTGGTAGCAATACCGTGT +
Preference number: 5 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLSLGQC*VVAIPC
Trigger: ACACGGTATTGCTACCACCAAACACTGCCCCAGGGA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTATGCCCCAACTCAGCTTaGGACCCAGACACTGCCATT +
Preference number: 5 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLCPNSA*DPDTAI
Trigger: AATGGCAGTGTCTGGGTCCAAAGCTGAGTTGGGGCA...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTACAGCGCTCCAGTGCTaGAGTGCAGCCGGAAGTGGC +
Preference number: 5 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGTALQC*SAAGSG
Trigger: GCCACTTCCGGCTGCACTCAAGCACTGGAGCGCTGT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGCCTCCATAAGTCACTaGCCCGTTGGCCCCCACGTC +
Preference number: 5 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAASISH*PVGPHV
Trigger: GACGTGGGGGCCAACGGGCAAGTGACTTATGGAGGC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCCAGCATCCCCGTCGATaGCATGCAGAGTGGTCACGA +
Preference number: 5 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPQHPRR*HAEWSR
Trigger: TCGTGACCACTCTGCATGCAATCGACGGGGATGCTG...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCCTGCCACACATGGCTaGCCATCTGCTGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGPATHG*PSAGKP
Trigger: TGGCTTCCCAGCAGATGGCAAGCCATGTGTGGCAGG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp TTCACCAGTGTAAGAGTCCACAGTAGTGCCAGGAGGTGGTGTGCCTaGCAGCCGGTACAGAATGGAAGCATTGGCACCAGCATCACGATC +
Preference number: 5 (lower is better)
Translates to: FTSVRVHSSARRWCA*QPVQNGSIGTSITI
Trigger: GATCGTGATGCTGGTGCCAATGCTTCCATTCTGTACCGGCTGGCAGGCACACCACCTCCTGGCACTACTGTGGACTCTTACACTGGTGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp GGTAGTGATAGTGCCTGTGGTTGGGTCTACGTGGAACAATCCACGTaGCGGCTGGGATGCAGCCAGACTGTAGGAAATCTGTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GSDSACGWVYVEQST*RLGCSQTVGNLSSR
Trigger: TCTGGAGGACAGATTTCCTACAGTCTGGCTGCATCCCAGCCGGCACGTGGATTGTTCCACGTAGACCCAACCACAGGCACTATCACTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp TCTAGTACAGTGACAGTGACTGGCACGACTGAGCTTTGGGGTGGCTaGCCACGGTCAGCTGCAGCCACTGTTAGATTGTACTGTGTCAGG +
Preference number: 5 (lower is better)
Translates to: SSTVTVTGTTELWGG*PRSAAATVRLYCVR
Trigger: CCTGACACAGTACAATCTAACAGTGGCTGCAGCTGACCGTGGGCAGCCACCCCAAAGCTCAGTCGTGCCAGTCACTGTCACTGTACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCCCACCATCTCGTGCTaGCACCACCAGTTCATGGAC +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGPTISC*HHQFMD
Trigger: GTCCATGAACTGGTGGTGCAAGCACGAGATGGTGGG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAGGCCAAAGGGGCTACTaGCTCCCTCTGCTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAGQRGY*LPLLQG
Trigger: ACCTTGCAGCAGAGGGAGCAAGTAGCCCCTTTGGCC...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCGTCTTCAGACAGCTGTaGCAGGCTGTAGGTCAGACG +
Preference number: 5 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPVFRQL*QAVGQT
Trigger: CGTCTGACCTACAGCCTGCAACAGCTGTCTGAAGAC...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCTCACGGTCCAGGGTTaGGAGTGTGGTCACTTCTCC +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGLTVQG*ECGHFS
Trigger: GGAGAAGTGACCACACTCCAAACCCTGGACCGTGAG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCAGGAACGTGGGGCTGTaGTCGTTGAGGTCAAGCACT +
Preference number: 5 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPRNVGL*SLRSST
Trigger: AGTGCTTGACCTCAACGACAACAGCCCCACGTTCCT...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGGGCACTCCCAAAGGTaGGTGCATGGTCATTCTCAT +
Preference number: 5 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLGHSQR*VHGHSH
Trigger: ATGAGAATGACCATGCACCAACCTTTGGGAGTGCCC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTCGGGGAGCATTGTCGTaGGCATCTTGCAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: SSIPLPPINKVSAPSQGARGALS*ASCRVR
Trigger: CCTGACCCTGCAAGATGCCAACGACAATGCTCCCCG...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCACTGTCCTCCAGAGCCTaGATCCAGGTCATCCGCCTC +
Preference number: 5 (lower is better)
Translates to: IPLPPINKVSAPSQGAGALSSRA*IQVIRL
Trigger: GAGGCGGATGACCTGGATCAAGGCTCTGGAGGACAG...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp AGGTTGGTGCATGGTCATTCTCATCCTCCACAGCCACTCGAACAGTaGCATGCGTTAACTGAGGAGGTGAGCCCCTGTCCTGGGCATACA +
Preference number: 5 (lower is better)
Translates to: RLVHGHSHPPQPLEQ*HALTEEVSPCPGHT
Trigger: TGTATGCCCAGGACAGGGGCTCACCTCCTCAGTTAACGCATGTCACTGTTCGAGTGGCTGTGGAGGATGAGAATGACCATGCACCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp TCGGCCACGCTGGTGCTGAGTAAGTTCAGTGGGAAGGCTGGGCCATaGTCATTCACATCCTGGACCTCAATTGTCACTGGTGCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: SATLVLSKFSGKAGP*SFTSWTSIVTGAKA
Trigger: TGCTTTGGCACCAGTGACAATTGAGGTCCAGGATGTGAATGATCATGGCCCAGCCTTCCCACTGAACTTACTCAGCACCAGCGTGGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GAAGGCTGGGCCATGATCATTCACATCCTGGACCTCAATTGTCACTaGTGCCAAAGCAAAGTGTGCACCAGCAGGGTCAGCAGCCTGTAC +
Preference number: 5 (lower is better)
Translates to: EGWAMIIHILDLNCH*CQSKVCTSRVSSLY
Trigger: GTACAGGCTGCTGACCCTGCTGGTGCACACTTTGCTTTGGCACCAGTGACAATTGAGGTCCAGGATGTGAATGATCATGGCCCAGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp AGCTTCATCCTTGAGCCGAGCGATCTCTGTGAAGACACTGGCCAGTaGTTGGAACTGAGGGCACCAGCTCAGCAGGTAGTCCCAGTTATA +
Preference number: 5 (lower is better)
Translates to: SFILEPSDLCEDTGQ*LELRAPAQQVVPVI
Trigger: TATAACTGGGACTACCTGCTGAGCTGGTGCCCTCAGTTCCAACCACTGGCCAGTGTCTTCACAGAGATCGCTCGGCTCAAGGATGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTTCTGTGGTCCTAGCATACACTGTCAGGTaGATCTCCTCCTGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: PHIGPGHRSVSNRASVVLAYTVR*ISSCSS
Trigger: AGAGGAACAGGAGGAGATCAACCTGACAGTGTATGC...TAGGACCACAGAAGCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp AGGGATCCCTCACTGAGGAGAACCCAGGGCTGCTACCTCCTTCATATTTCTCCCTACTGCAACTGCCCATaGGCTCCCACATCTGGATCA +
Preference number: 5 (lower is better)
Translates to: RDPSLRRTQGCYLLHISPYCNCP*APTSGS
Trigger: TGATCCAGATGTGGGAGCCAATGGGCAGTTGCAGTA...GGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTCTCCTCAGTGAGGGATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCATTGTCGTTGGCATCTaGCAGGGTCAGGGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGIVVGI*QGQGQH
Trigger: GTGCTGACCCTGACCCTGCAAGATGCCAACGACAAT...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp TCATTCTCATCCTCCACAGCCACTCGAACAGTGACATGCGTTAACTaGGGAGGTGAGCCCCTGTCCTGGGCATACACTGTCAGGTTGATC +
Preference number: 5 (lower is better)
Translates to: SFSSSTATRTVTCVN*GGEPLSWAYTVRLI
Trigger: GATCAACCTGACAGTGTATGCCCAGGACAGGGGCTCACCTCCTCAGTTAACGCATGTCACTGTTCGAGTGGCTGTGGAGGATGAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp GCAACCTCAGCACAGCTGTGCCTGGTGGACTCTGGGCACTTATACTaGCAGCATACTCCCGTGGATAAAACTGAGGAGGGTTGTCATTCT +
Preference number: 5 (lower is better)
Translates to: ATSAQLCLVDSGHLY*QHTPVDKTEEGCHS
Trigger: AGAATGACAACCCTCCTCAGTTTTATCCACGGGAGTATGCTGCCAGTATAAGTGCCCAGAGTCCACCAGGCACAGCTGTGCTGAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 90 bp TCATTGACATCTAGTACAGTGACAGTGACTGGCACGACTGAGCTTTaGGGTGGCTGCCCACGGTCAGCTGCAGCCACTGTTAGATTGTAC +
Preference number: 5 (lower is better)
Translates to: SLTSSTVTVTGTTEL*GGCPRSAAATVRLY
Trigger: GTACAATCTAACAGTGGCTGCAGCTGACCGTGGGCAGCCACCCCAAAGCTCAGTCGTGCCAGTCACTGTCACTGTACTAGATGTCAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGGAAAGGCAGGGGAGTaGTCATTCACATCATCCAGC +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGGKAGE*SFTSSS
Trigger: GCTGGATGATGTGAATGACAACTCCCCTGCCTTTCC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCTGTGTTCATTCTGGTaGAGGATGCTGACCCTCACG +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGLCSFW*RMLTLT
Trigger: CGTGAGGGTCAGCATCCTCAACCAGAATGAACACAG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTTGGATGCGGAAGGCCTaGCTGTCTTCAGACAGCTGT +
Preference number: 5 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGWMRKA*LSSDSC
Trigger: ACAGCTGTCTGAAGACAGCAAGGCCTTCCGCATCCA...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGTGGGGCTGTTGTCGTaGAGGTCAAGCACTGCAACA +
Preference number: 5 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAVGLLS*RSSTAT
Trigger: TGTTGCAGTGCTTGACCTCAACGACAACAGCCCCAC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGTGGGGCGATTGTCATaGGTGTCGATGACCATCACC +
Preference number: 5 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGVGRLS*VSMTIT
Trigger: GGTGATGGTCATCGACACCAATGACAATCGCCCCAC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 90 bp ATTCACATCCTGGACCTCAATTGTCACTGGTGCCAAAGCAAAGTGTaGACCAGCAGGGTCAGCAGCCTGTACTACAAGCTGATGTCGAGC +
Preference number: 5 (lower is better)
Translates to: IHILDLNCHWCQSKV*TSRVSSLYYKLMSS
Trigger: GCTCGACATCAGCTTGTAGTACAGGCTGCTGACCCTGCTGGTGCACACTTTGCTTTGGCACCAGTGACAATTGAGGTCCAGGATGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTCCTTCCAGGGACACATaGACATGGGCAAAGTCACCA +
Preference number: 5 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGPSRDT*TWAKSP
Trigger: TGGTGACTTTGCCCATGTCAATGTGTCCCTGGAAGG...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCTCAAAGGCAGGTGCATaGTCGTTGACATCAGTGACG +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGSKAGA*SLTSVT
Trigger: CGTCACTGATGTCAACGACAATGCACCTGCCTTTGA...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTACATATACCATGGACTaGAGGCCTCCCCCATCCACA +
Preference number: 5 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGTYTMD*RPPPST
Trigger: TGTGGATGGGGGAGGCCTCAAGTCCATGGTATATGT...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGTGAACAGGGTCCCATaGTTGGGGTCAACACTGAAG +
Preference number: 5 (lower is better)
Translates to: SIPLPPINKVSAPSQGAGVNRVP*LGSTLK
Trigger: CTTCAGTGTTGACCCCAACAATGGGACCCTGTTCAC...ACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCCATCCTGGACCTCAATaGTCACTGGTGCCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGHPGPQ*SLVPKQ
Trigger: TTGCTTTGGCACCAGTGACAATTGAGGTCCAGGATG...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTCACGCAACTCCCCTGTaGAGCTGTTCAGTGCAAATG +
Preference number: 5 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAHATPL*SCSVQM
Trigger: CATTTGCACTGAACAGCTCAACAGGGGAGTTGCGTG...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCGCAGCCACTGTTAGATaGTACTGTGTCAGGCTTTCA +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGAATVR*YCVRLS
Trigger: TGAAAGCCTGACACAGTACAATCTAACAGTGGCTGC...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 90 bp ATACTGGGGTATTTGGGTCTGACACCAAGTGGGTATAAAGCTAAATaGTACCTGGTGGGTTGTGTGCCTGGACTATGCCCACACTGGTGC +
Preference number: 5 (lower is better)
Translates to: ILGYLGLTPSGYKAK*YLVGCVPGLCPHWC
Trigger: GCACCAGTGTGGGCATAGTCCAGGCACACAACCCACCAGGTATCATTTAGCTTTATACCCACTTGGTGTCAGACCCAAATACCCCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680123.1
CDS-3UTR CAA 90 bp CCTTCATATTTCTCCCCACATTGGACCTGGTCACAGGTCAGTGAGCAACAGGGCACAGGTGGGTTGTCATaGACATCTAGTACAGTGACA +
Preference number: 5 (lower is better)
Translates to: PSYFSPHWTWSQVSEQQGTGGLS*TSSTVT
Trigger: TGTCACTGTACTAGATGTCAATGACAACCCACCTGT...GCCCTGTTGCTCACTGACCTGTGACCAGGTCCAATGTGGGGAGAAATATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp ATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGGTGCAATTATCATTCACATCTaGCAGGGCCACGCTAACTGT +
Preference number: 5 (lower is better)
Translates to: IPLPPINKVSAPSQGAGAIIIHI*QGHANC
Trigger: ACAGTTAGCGTGGCCCTGCAAGATGTGAATGATAAT...TGCACCAGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS-3UTR CAA 90 bp TCCTCCATCCCCCTACCCCCAATAAATAAAGTCTCAGCTCCATCTCAGGGTGCTGTAAAGACAGGTGGGTaGTCATTGACATCTAGTACA +
Preference number: 5 (lower is better)
Translates to: SSIPLPPINKVSAPSQGAVKTGG*SLTSST
Trigger: TGTACTAGATGTCAATGACAACCCACCTGTCTTTAC...AGCACCCTGAGATGGAGCTGAGACTTTATTTATTGGGGGTAGGGGGATGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CGGGCTACCACGTGCAGGGCCGCGGGCCCAGGCGGCTaGTCCTCTGGGAGGCGCACGCGTGACGGCGAGGCG +
Preference number: 6 (lower is better)
Translates to: RATTCRAAGPGG*SSGRRTRDGEA
Trigger: CGCCTCGCCGTCACGCGTGCGCCTCCCAGAGGACCAGCCGCCTGGGCCCGCGGCCCTGCACGTGGTAGCCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GCAGCCTCGCCCAGATCCGGGTCCCGGGCTACCACGTaGAGGGCCGCGGGCCCAGGCGGCTGGTCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: AASPRSGSRATT*RAAGPGGWSSG
Trigger: CCCAGAGGACCAGCCGCCTGGGCCCGCGGCCCTGCACGTGGTAGCCCGGGACCCGGATCTGGGCGAGGCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GTGCTTCCCGCCGGGTCCGGCCCCCACCCCCAGAGGTaGCTGTTCCGCTGCCTGGTGCCCGACTGTCCACCC +
Preference number: 6 (lower is better)
Translates to: VLPAGSGPHPQR*LFRCLVPDCPP
Trigger: GGGTGGACAGTCGGGCACCAGGCAGCGGAACAGCCACCTCTGGGGGTGGGGGCCGGACCCGGCGGGAAGCAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GGGTCCGGCCCCCACCCCCAGAGGTGGCTGTTCCGCTaGCTGGTGCCCGACTGTCCACCCGCAGGTACAGGG +
Preference number: 6 (lower is better)
Translates to: GSGPHPQRWLFR*LVPDCPPAGTG
Trigger: CCCTGTACCTGCGGGTGGACAGTCGGGCACCAGGCAGCGGAACAGCCACCTCTGGGGGTGGGGGCCGGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp AGACGCGCGCTGAAACGCGCGCTGCACGACGGCGGCTaGCGTTGGCGGGCCGGTCGGTGGCTTCCACCAGCA +
Preference number: 6 (lower is better)
Translates to: RRALKRALHDGG*RWRAGRWLPPA
Trigger: TGCTGGTGGAAGCCACCGACCGGCCCGCCAACGCCAGCCGCCGTCGTGCAGCGCGCGTTTCAGCGCGCGTCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CCGGCCCCCACCCCCAGAGGTGGCTGTTCCGCTGCCTaGTGCCCGACTGTCCACCCGCAGGTACAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: PAPTPRGGCSAA*CPTVHPQVQGS
Trigger: GGAGCCCTGTACCTGCGGGTGGACAGTCGGGCACCAGGCAGCGGAACAGCCACCTCTGGGGGTGGGGGCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp ACGAAGACGCGCGCTGAAACGCGCGCTGCACGACGGCGGCTGGCGTaGGCGGGCCGGTCGGTGGCTTCCACCAGCAGCAGCAGCGCGGGA +
Preference number: 6 (lower is better)
Translates to: TKTRAETRAARRRLA*AGRSVASTSSSSAG
Trigger: TCCCGCGCTGCTGCTGCTGGTGGAAGCCACCGACCGGCCCGCCAACGCCAGCCGCCGTCGTGCAGCGCGCGTTTCAGCGCGCGTCTTCGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GTAGGTGAGTGCACCCACACCCGCGGGCTCTGGCGCTaGCACCGAGCCCAACAGAGAGCCGGGCCGCAGTCC +
Preference number: 6 (lower is better)
Translates to: VGECTHTRGLWR*HRAQQRAGPQS
Trigger: GGACTGCGGCCCGGCTCTCTGTTGGGCTCGGTGGCAGCGCCAGAGCCCGCGGGTGTGGGTGCACTCACCTAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp TGCCCTCGGGATCGGCACCGCCCACCAGTGTGTAGGTaGGTGCACCCACACCCGCGGGCTCTGGCGCTGCCA +
Preference number: 6 (lower is better)
Translates to: CPRDRHRPPVCR*VHPHPRALALP
Trigger: TGGCAGCGCCAGAGCCCGCGGGTGTGGGTGCACTCACCTACACACTGGTGGGCGGTGCCGATCCCGAGGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CTCGGGATCGGCACCGCCCACCAGTGTGTAGGTGAGTaGACCCACACCCGCGGGCTCTGGCGCTGCCACCGA +
Preference number: 6 (lower is better)
Translates to: LGIGTAHQCVGE*THTRGLWRCHR
Trigger: TCGGTGGCAGCGCCAGAGCCCGCGGGTGTGGGTGCACTCACCTACACACTGGTGGGCGGTGCCGATCCCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GCCCCCACCCCCAGAGGTGGCTGTTCCGCTGCCTGGTaGCCGACTGTCCACCCGCAGGTACAGGGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: APTPRGGCSAAW*PTVHPQVQGSC
Trigger: ACAGGAGCCCTGTACCTGCGGGTGGACAGTCGGGCACCAGGCAGCGGAACAGCCACCTCTGGGGGTGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TGCTGTCACCGTCAGCACGACAGGCACTGGTGCCGCTaGGTCCCGCTCTGCGAGATCTGGGGGCGGCTCGGC +
Preference number: 6 (lower is better)
Translates to: CCHRQHDRHWCR*VPLCEIWGRLG
Trigger: GCCGAGCCGCCCCCAGATCTCGCAGAGCGGGACCCAGCGGCACCAGTGCCTGTCGTGCTGACGGTGACAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CAGTGTGTAGGTGAGTGCACCCACACCCGCGGGCTCTaGCGCTGCCACCGAGCCCAACAGAGAGCCGGGCCG +
Preference number: 6 (lower is better)
Translates to: QCVGECTHTRGL*RCHRAQQRAGP
Trigger: CGGCCCGGCTCTCTGTTGGGCTCGGTGGCAGCGCCAGAGCCCGCGGGTGTGGGTGCACTCACCTACACACTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp TTCGAAGTCCAGGGGCCGCGCCAGGTACAAGCGCCCTaGGGCCGCATCCAGCGCGAAGGTGCCCTCGGGATC +
Preference number: 6 (lower is better)
Translates to: FEVQGPRQVQAP*GRIQREGALGI
Trigger: GATCCCGAGGGCACCTTCGCGCTGGATGCGGCCTCAGGGCGCTTGTACCTGGCGCGGCCCCTGGACTTCGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp CCATCGGCACCCCCATCCTCATCTGTGGCCTGCACGTaGCCCAAGCTGTGGCCACGCCGGGCACCTTCGGGC +
Preference number: 6 (lower is better)
Translates to: PSAPPSSSVACT*PKLWPRRAPSG
Trigger: GCCCGAAGGTGCCCGGCGTGGCCACAGCTTGGGTCACGTGCAGGCCACAGATGAGGATGGGGGTGCCGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CTCAGCTGCTGTCACCGTCAGCACGACAGGCACTGGTaGCGCTGGGTCCCGCTCTGCGAGATCTGGGGGCGG +
Preference number: 6 (lower is better)
Translates to: LSCCHRQHDRHW*RWVPLCEIWGR
Trigger: CCGCCCCCAGATCTCGCAGAGCGGGACCCAGCGGCACCAGTGCCTGTCGTGCTGACGGTGACAGCAGCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CGAGCCCAACAGAGAGCCGGGCCGCAGTCCCTCAGCTaGTGTCACCGTCAGCACGACAGGCACTGGTGCCGC +
Preference number: 6 (lower is better)
Translates to: RAQQRAGPQSLS*CHRQHDRHWCR
Trigger: GCGGCACCAGTGCCTGTCGTGCTGACGGTGACAGCAGCTGAGGGACTGCGGCCCGGCTCTCTGTTGGGCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GGTACAAGCGCCCTGAGGCCGCATCCAGCGCGAAGGTaGCCTCGGGATCGGCACCGCCCACCAGTGTGTAGG +
Preference number: 6 (lower is better)
Translates to: GTSALRPHPARR*PRDRHRPPVCR
Trigger: CCTACACACTGGTGGGCGGTGCCGATCCCGAGGGCACCTTCGCGCTGGATGCGGCCTCAGGGCGCTTGTACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp TCGTCGTTGACGTCAGCGACACTGACGGTCAGGACCTaGGTGGCCGAGCGCGGCGGGGAGCCGTGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: SSLTSATLTVRT*VAERGGEPWSE
Trigger: CTCAGACCACGGCTCCCCGCCGCGCTCGGCCACGCAGGTCCTGACCGTCAGTGTCGCTGACGTCAACGACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CTGGTCCTGCAGCTGCACGTGCACTGTGGCTCGTGCTaGCCGGCCTGGAGCCCCGTGGTCTCGTGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: LVLQLHVHCGSC*PAWSPVVSCFQ
Trigger: CTGGAAGCACGAGACCACGGGGCTCCAGGCCGGGCAGCACGAGCCACAGTGCACGTGCAGCTGCAGGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GGCCGAGCCCAGCTCAGGGTGAGCCCCACCATCTCGTaGTTGCACCACCAGTTCATGGACCCGCCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: GRAQLRVSPTIS*LHHQFMDPPLL
Trigger: GAGCAGCGGCGGGTCCATGAACTGGTGGTGCAAGCACGAGATGGTGGGGCTCACCCTGAGCTGGGCTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GTTCTGGTCCTGCAGCTGCACGTGCACTGTGGCTCGTaGTGCCCGGCCTGGAGCCCCGTGGTCTCGTGCTTC +
Preference number: 6 (lower is better)
Translates to: VLVLQLHVHCGS*CPAWSPVVSCF
Trigger: GAAGCACGAGACCACGGGGCTCCAGGCCGGGCAGCACGAGCCACAGTGCACGTGCAGCTGCAGGACCAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TCCCTCAGCTGCTGTCACCGTCAGCACGACAGGCACTaGTGCCGCTGGGTCCCGCTCTGCGAGATCTGGGGG +
Preference number: 6 (lower is better)
Translates to: SLSCCHRQHDRH*CRWVPLCEIWG
Trigger: CCCCCAGATCTCGCAGAGCGGGACCCAGCGGCACCAGTGCCTGTCGTGCTGACGGTGACAGCAGCTGAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CAGCTGCACGTGCACTGTGGCTCGTGCTGCCCGGCCTaGAGCCCCGTGGTCTCGTGCTTCCAGCACCACATC +
Preference number: 6 (lower is better)
Translates to: QLHVHCGSCCPA*SPVVSCFQHHI
Trigger: GATGTGGTGCTGGAAGCACGAGACCACGGGGCTCCAGGCCGGGCAGCACGAGCCACAGTGCACGTGCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp CGCGTTGTCATTCTCATCCGTGACGAAGACGCGCGCTaGAACGCGCGCTGCACGACGGCGGCTGGCGTTGGC +
Preference number: 6 (lower is better)
Translates to: RVVILIRDEDAR*NARCTTAAGVG
Trigger: GCCAACGCCAGCCGCCGTCGTGCAGCGCGCGTTTCAGCGCGCGTCTTCGTCACGGATGAGAATGACAACGCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GGGGAGCCGTGGTCTGAGGCCACCACTGTCAGTACGTaGTCAGCTCGTTGTTCGCGGTCCAACGGCCGCACC +
Preference number: 6 (lower is better)
Translates to: GEPWSEATTVST*SARCSRSNGRT
Trigger: GGTGCGGCCGTTGGACCGCGAACAACGAGCTGAGCACGTACTGACAGTGGTGGCCTCAGACCACGGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CACTGTGGCACTCCGGGAACCAGGCAGAGGCCCCCGTaGTATCACCTCCAGCCTCAGCTCCCGTGGTGCTTC +
Preference number: 6 (lower is better)
Translates to: HCGTPGTRQRPP*YHLQPQLPWCF
Trigger: GAAGCACCACGGGAGCTGAGGCTGGAGGTGATAGCACGGGGGCCTCTGCCTGGTTCCCGGAGTGCCACAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CTGCCTGTGACATTGGGCCAGGGGCTGCCTCAGCCTTaGGGCTACGGGCCCGAACAAGTCCTAGGACCAGGG +
Preference number: 6 (lower is better)
Translates to: LPVTLGQGLPQP*GYGPEQVLGPG
Trigger: CCCTGGTCCTAGGACTTGTTCGGGCCCGTAGCCGCAAGGCTGAGGCAGCCCCTGGCCCAATGTCACAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GTTCCCACATCCTGTACCACCACCCGTAGTCGAAAGTaGCTGGTGCGTGGTGGGGAGCCCCCATCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: VPTSCTTTRSRK*LVRGGEPPSRA
Trigger: GGCCCGGGATGGGGGCTCCCCACCACGCACCAGCCACTTTCGACTACGGGTGGTGGTACAGGATGTGGGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TCGGTCAGTGGCAAAGACTCGGCCCACGCTGGTCCCTaGGGGCTGGTTCTCAGCCACAGCCAGGAAGGTGGG +
Preference number: 6 (lower is better)
Translates to: SVSGKDSAHAGP*GLVLSHSQEGG
Trigger: CCCACCTTCCTGGCTGTGGCTGAGAACCAGCCCCCAGGGACCAGCGTGGGCCGAGTCTTTGCCACTGACCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TGCACTGTGGCTCGTGCTGCCCGGCCTGGAGCCCCGTaGTCTCGTGCTTCCAGCACCACATCCACTGCTCCT +
Preference number: 6 (lower is better)
Translates to: CTVARAARPGAP*SRASSTTSTAP
Trigger: AGGAGCAGTGGATGTGGTGCTGGAAGCACGAGACCACGGGGCTCCAGGCCGGGCAGCACGAGCCACAGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp GCTGCCTGTGACATTGGGCCAGGGGCTGCCTCAGCCTaGCGGCTACGGGCCCGAACAAGTCCTAGGACCAGG +
Preference number: 6 (lower is better)
Translates to: AACDIGPGAASA*RLRARTSPRTR
Trigger: CCTGGTCCTAGGACTTGTTCGGGCCCGTAGCCGCAAGGCTGAGGCAGCCCCTGGCCCAATGTCACAGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GGTCAGGATCCCGAGCAGTCACCCGCACTACAAAGCTaGCAGGCAGCGCAACCTCAGGCAGGGGCTCAGGTC +
Preference number: 6 (lower is better)
Translates to: GQDPEQSPALQS*QAAQPQAGAQV
Trigger: GACCTGAGCCCCTGCCTGAGGTTGCGCTGCCTGGCAGCTTTGTAGTGCGGGTGACTGCTCGGGATCCTGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp TGTAGGCCACCTCCGTCCTCAGCCCCGATCTCCAGCTaGACCACAGAATTGGCCCGTCTGGCCAAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: CRPPPSSAPISS*TTELARLAKGQ
Trigger: CTGGCCCTTGGCCAGACGGGCCAATTCTGTGGTGCAGCTGGAGATCGGGGCTGAGGACGGAGGTGGCCTACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299441.5
ENST00000680123.1
CDS GCA 72 bp GCACCCGAGCTACAGCGAAAGCTGGGGGCACTCCACTaGCTGCTCGCACCTCCAGCTCCAACACTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: APELQRKLGALH*LLAPPAPTLVP
Trigger: TGGGACCAGTGTTGGAGCTGGAGGTGCGAGCAGGCAGTGGAGTGCCCCCAGCTTTCGCTGTAGCTCGGGTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp AGTCACTTGCCCGTTGGCCCCCACGTCGGGGTCGGTTaGTCGCAGGGTGAGCAGAGATGTGCCAGGAGGGTT +
Preference number: 6 (lower is better)
Translates to: SHLPVGPHVGVG*SQGEQRCARRV
Trigger: AACCCTCCTGGCACATCTCTGCTCACCCTGCGAGCAACCGACCCCGACGTGGGGGCCAACGGGCAAGTGACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GCCGCTCTAACTGCAGCAGCCCCGTGTGTGCGTCGATaGAGAAGGGTCCATCACCCTCGCTCTGCCTCCGGT +
Preference number: 6 (lower is better)
Translates to: AALTAAAPCVRR*RRVHHPRSASG
Trigger: ACCGGAGGCAGAGCGAGGGTGATGGACCCTTCTCCATCGACGCACACACGGGGCTGCTGCAGTTAGAGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp ATCCAGCAGCACACGCACCCGAGCTACAGCGAAAGCTaGGGGCACTCCACTGCCTGCTCGCACCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: IQQHTHPSYSES*GHSTACSHLQL
Trigger: GAGCTGGAGGTGCGAGCAGGCAGTGGAGTGCCCCCAGCTTTCGCTGTAGCTCGGGTGCGTGTGCTGCTGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp CCCAAGGAGGCTGCCACGGCCCCTACTAATAGCAGGTaGAGGTCAGGTGCCAGGCCCAGTGCGGTGTGGGTG +
Preference number: 6 (lower is better)
Translates to: PKEAATAPTNSR*RSGARPSAVWV
Trigger: CACCCACACCGCACTGGGCCTGGCACCTGACCTCAACCTGCTATTAGTAGGGGCCGTGGCAGCCTCCTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp CCCCCATCTGGTGCTTGGGCCTGCACTTGCAGGACCTaGGTTCCAGCAGTGGTGCCTGAGGGCAGGTCCACA +
Preference number: 6 (lower is better)
Translates to: PPSGAWACTCRT*VPAVVPEGRST
Trigger: TGTGGACCTGCCCTCAGGCACCACTGCTGGAACTCAGGTCCTGCAAGTGCAGGCCCAAGCACCAGATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp GGGTCGCCTGAGCTGACAGTGAAACGCACGAGGCCATaGGGGCCAGGGTCAGCGTCAGAGGCCTCTACATGC +
Preference number: 6 (lower is better)
Translates to: GSPELTVKRTRP*GPGSASEASTC
Trigger: GCATGTAGAGGCCTCTGACGCTGACCCTGGCCCTCATGGCCTCGTGCGTTTCACTGTCAGCTCAGGCGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GCCCTCTTGGGCAGAGATGAAGTACATGAGAGGAGCTaGCGTGCCTGCCGGAAGCCCCGCACTGATGTCGCC +
Preference number: 6 (lower is better)
Translates to: ALLGRDEVHERS*RACRKPRTDVA
Trigger: GGCGACATCAGTGCGGGGCTTCCGGCAGGCACGGCAGCTCCTCTCATGTACTTCATCTCTGCCCAAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp ACCCGCCGCTGCTCAAAGTCCAGTGGCCGCTCTAACTaGAGCAGCCCCGTGTGTGCGTCGATGGAGAAGGGT +
Preference number: 6 (lower is better)
Translates to: TRRCSKSSGRSN*SSPVCASMEKG
Trigger: ACCCTTCTCCATCGACGCACACACGGGGCTGCTGCAGTTAGAGCGGCCACTGGACTTTGAGCAGCGGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GAGGGTGGTGGACTAGGTGGCTCCCGGCCCAGTTTCTaGAGTGAGTCACTGGCTAGGGGTGCTGCCTGTGAC +
Preference number: 6 (lower is better)
Translates to: EGGGLGGSRPSF*SESLARGAACD
Trigger: GTCACAGGCAGCACCCCTAGCCAGTGACTCACTGCAGAAACTGGGCCGGGAGCCACCTAGTCCACCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GAGGGCACCAGCTCAGCAGGTAGTCCCAGTTATAGCTaGCACGGAGCTCCTCCTCGCCGGCCACAATGGCTG +
Preference number: 6 (lower is better)
Translates to: EGTSSAGSPSYS*HGAPPRRPQWL
Trigger: CAGCCATTGTGGCCGGCGAGGAGGAGCTCCGTGGCAGCTATAACTGGGACTACCTGCTGAGCTGGTGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CGGTCCAGGGTCCGGGTTGTGCACACATCACCGCTGTaGGCATCAATGCGGAATGGGGGAGATCCGGAGGAC +
Preference number: 6 (lower is better)
Translates to: RSRVRVVHTSPL*ASMRNGGDPED
Trigger: GTCCTCCGGATCTCCCCCATTCCGCATTGATGCCCACAGCGGTGATGTGTGCACAACCCGGACCCTGGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp AGGTCAGACGTCCATTGGGTCCTGAGTCTCGGTCAGTaGCAAAGACTCGGCCCACGCTGGTCCCTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: RSDVHWVLSLGQ*QRLGPRWSLGA
Trigger: AGCCCCCAGGGACCAGCGTGGGCCGAGTCTTTGCCACTGACCGAGACTCAGGACCCAATGGACGTCTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TCAGAGGCCCGAAGCATGGTAAGGGTCTGGGGGTCCTaGCCCTCAGGCACCTCCAGAGAGAGATGGGCACTC +
Preference number: 6 (lower is better)
Translates to: SEARSMVRVWGS*PSGTSRERWAL
Trigger: GAGTGCCCATCTCTCTCTGGAGGTGCCTGAGGGCCAGGACCCCCAGACCCTTACCATGCTTCGGGCCTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GCTGGCTGGCCTCCATCCCGGGCCTCTATCCTCAGCTaGAAAGCTGGCTCCACTTCTCTGTCTAGTGGCCGC +
Preference number: 6 (lower is better)
Translates to: AGWPPSRASILS*KAGSTSLSSGR
Trigger: GCGGCCACTAGACAGAGAAGTGGAGCCAGCTTTCCAGCTGAGGATAGAGGCCCGGGATGGAGGCCAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GCTGTTCAGTGCAAATGCCTCACGGCCCTCAGGTCCTaGCCCAGCCTCCAACAGGCTGTAACGGAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: AVQCKCLTALRS*PSLQQAVTEPP
Trigger: GGGAGGCTCCGTTACAGCCTGTTGGAGGCTGGGCCAGGACCTGAGGGCCGTGAGGCATTTGCACTGAACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp CGAGCCCAGCTCAGGGTGAGCCCCACCATCTCGTGCTaGCACCACCAGTTCATGGACCCGCCGCTGCTCAAA +
Preference number: 6 (lower is better)
Translates to: RAQLRVSPTISC*HHQFMDPPLLK
Trigger: TTTGAGCAGCGGCGGGTCCATGAACTGGTGGTGCAAGCACGAGATGGTGGGGCTCACCCTGAGCTGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp AGCTTGAGGGCCCCTGGTCACGGTCCAGGGTCCGGGTaGTGCACACATCACCGCTGTGGGCATCAATGCGGA +
Preference number: 6 (lower is better)
Translates to: SLRAPGHGPGSG*CTHHRCGHQCG
Trigger: TCCGCATTGATGCCCACAGCGGTGATGTGTGCACAACCCGGACCCTGGACCGTGACCAGGGGCCCTCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp CCGTCCTCAGCCCCGATCTCCAGCTGCACCACAGAATaGGCCCGTCTGGCCAAGGGCCAGGCTACTGTCAAC +
Preference number: 6 (lower is better)
Translates to: PSSAPISSCTTE*ARLAKGQATVN
Trigger: GTTGACAGTAGCCTGGCCCTTGGCCAGACGGGCCAATTCTGTGGTGCAGCTGGAGATCGGGGCTGAGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299441.5
ENST00000680123.1
CDS CAA 90 bp CACAAAGGCCGAGCCCAGCTCAGGGTGAGCCCCACCATCTCGTGCTaGCACCACCAGTTCATGGACCCGCCGCTGCTCAAAGTCCAGTGG +
Preference number: 6 (lower is better)
Translates to: HKGRAQLRVSPTISC*HHQFMDPPLLKVQW
Trigger: CCACTGGACTTTGAGCAGCGGCGGGTCCATGAACTGGTGGTGCAAGCACGAGATGGTGGGGCTCACCCTGAGCTGGGCTCGGCCTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp AGGCCACCTCCGTCCTCAGCCCCGATCTCCAGCTGCACCACAGAATaGGCCCGTCTGGCCAAGGGCCAGGCTACTGTCAACAGCCCTGAT +
Preference number: 6 (lower is better)
Translates to: RPPPSSAPISSCTTE*ARLAKGQATVNSPD
Trigger: ATCAGGGCTGTTGACAGTAGCCTGGCCCTTGGCCAGACGGGCCAATTCTGTGGTGCAGCTGGAGATCGGGGCTGAGGACGGAGGTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299441.5
ENST00000680123.1
CDS CAA 90 bp CACCTGCACCAGCAGCTGGAGGCTGGCACTTCGAGGAGGGCTGCCTaGGTCATGAGCACTCAGTGTCAGCACATAGTGGGGCCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: HLHQQLEAGTSRRAA*VMSTQCQHIVGPLC
Trigger: GCAGAGCGGCCCCACTATGTGCTGACACTGAGTGCTCATGACCAAGGCAGCCCTCCTCGAAGTGCCAGCCTCCAGCTGCTGGTGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp CCAGTTTCTGCAGTGAGTCACTGGCTAGGGGTGCTGCCTGTGACATaGGGCCAGGGGCTGCCTCAGCCTTGCGGCTACGGGCCCGAACAA +
Preference number: 6 (lower is better)
Translates to: PVSAVSHWLGVLPVT*GQGLPQPCGYGPEQ
Trigger: TTGTTCGGGCCCGTAGCCGCAAGGCTGAGGCAGCCCCTGGCCCAATGTCACAGGCAGCACCCCTAGCCAGTGACTCACTGCAGAAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp ACTGTGTTCGTCAATGGCCAGGTCTGTGCCCACGCCGCTGCCCTCTaGGGCAGAGATGAAGTACATGAGAGGAGCTGCCGTGCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: TVFVNGQVCAHAAAL*GRDEVHERSCRACR
Trigger: CCGGCAGGCACGGCAGCTCCTCTCATGTACTTCATCTCTGCCCAAGAGGGCAGCGGCGTGGGCACAGACCTGGCCATTGACGAACACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp CGGCTGGGATGCAGCCAGACTGTAGGAAATCTGTCCTCCAGAGCCTaGATCCAGGTCATCCGCCTCCACCTGCAGCAGGGGCCCCTCCAA +
Preference number: 6 (lower is better)
Translates to: RLGCSQTVGNLSSRA*IQVIRLHLQQGPLQ
Trigger: TTGGAGGGGCCCCTGCTGCAGGTGGAGGCGGATGACCTGGATCAAGGCTCTGGAGGACAGATTTCCTACAGTCTGGCTGCATCCCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp GGGGTCCACGCTCAGCTTCCCCCTGCAGTCCAACAATaGTCACACCAGTGGCAGAGCGAGCTGGACGGCCAA +
Preference number: 6 (lower is better)
Translates to: GVHAQLPPAVQQ*SHQWQSELDGQ
Trigger: TTGGCCGTCCAGCTCGCTCTGCCACTGGTGTGATCATTGTTGGACTGCAGGGGGAAGCTGAGCGTGGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp TTGAGGGCCCCTGGTCACGGTCCAGGGTCCGGGTTGTaGACACATCACCGCTGTGGGCATCAATGCGGAATG +
Preference number: 6 (lower is better)
Translates to: LRAPGHGPGSGL*THHRCGHQCGM
Trigger: CATTCCGCATTGATGCCCACAGCGGTGATGTGTGCACAACCCGGACCCTGGACCGTGACCAGGGGCCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp ATGAGCACTCAGTGTCAGCACATAGTGGGGCCGCTCTaGTCGGATCAGGGGAGCTGCAGTGAGCAGCTCCCC +
Preference number: 6 (lower is better)
Translates to: MSTQCQHIVGPL*SDQGSCSEQLP
Trigger: GGGGAGCTGCTCACTGCAGCTCCCCTGATCCGAGCAGAGCGGCCCCACTATGTGCTGACACTGAGTGCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp TGTGAGGTTGGCACGGCCCTCATGAGGCCCATCATGTaGCAGCAGCTGCAGCTGGTAGCGGTCACACTGCTC +
Preference number: 6 (lower is better)
Translates to: CEVGTALMRPIM*QQLQLVAVTLL
Trigger: GAGCAGTGTGACCGCTACCAGCTGCAGCTGCTGGCACATGATGGGCCTCATGAGGGCCGTGCCAACCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CCCAGTAACTACCAGCTCAGGTACTGGAGTCCCATCTaGACCGGGGCGTGTCTCCAGCCGGAAGGTCTCTCC +
Preference number: 6 (lower is better)
Translates to: PSNYQLRYWSPI*TGACLQPEGLS
Trigger: GGAGAGACCTTCCGGCTGGAGACACGCCCCGGTCCAGATGGGACTCCAGTACCTGAGCTGGTAGTTACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TCGGTCCAGTTCCCCAGTAACTACCAGCTCAGGTACTaGAGTCCCATCTGGACCGGGGCGTGTCTCCAGCCG +
Preference number: 6 (lower is better)
Translates to: SVQFPSNYQLRY*SPIWTGACLQP
Trigger: CGGCTGGAGACACGCCCCGGTCCAGATGGGACTCCAGTACCTGAGCTGGTAGTTACTGGGGAACTGGACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CGTCCTCAGCCCCGATCTCCAGCTGCACCACAGAATTaGCCCGTCTGGCCAAGGGCCAGGCTACTGTCAACA +
Preference number: 6 (lower is better)
Translates to: RPQPRSPAAPQN*PVWPRARLLST
Trigger: TGTTGACAGTAGCCTGGCCCTTGGCCAGACGGGCCAATTCTGTGGTGCAGCTGGAGATCGGGGCTGAGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299441.5
ENST00000680123.1
CDS CCA 72 bp GTCACAGGTGCCAAGCGACCTGGTGGGTTGTGTGCCTaGACTATGCCCACACTGGTGCCTGGTGCCACATCC +
Preference number: 6 (lower is better)
Translates to: VTGAKRPGGLCA*TMPTLVPGATS
Trigger: GGATGTGGCACCAGGCACCAGTGTGGGCATAGTCCAGGCACACAACCCACCAGGTCGCTTGGCACCTGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CAAGGAGCCACCACGGGGGTAGGGTCCTCCAGCTCCTaGCCCACCATAGCTGGGAAGAGTCTGGTGATAGAG +
Preference number: 6 (lower is better)
Translates to: QGATTGVGSSSS*PTIAGKSLVIE
Trigger: CTCTATCACCAGACTCTTCCCAGCTATGGTGGGCCAGGAGCTGGAGGACCCTACCCCCGTGGTGGCTCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp GACACTCGGAGCTCCCAGGGTTGGGGGATGGTGGGGCGATTGTCATaGGTGTCGATGACCATCACCGTCAAGGTAGCTGAGCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: DTRSSQGWGMVGRLS*VSMTITVKVAEPTR
Trigger: CCTGGTGGGCTCAGCTACCTTGACGGTGATGGTCATCGACACCAATGACAATCGCCCCACCATCCCCCAACCCTGGGAGCTCCGAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp ACCACAACTCCCAAGGAGGCTGCCACGGCCCCTACTAATAGCAGGTaGAGGTCAGGTGCCAGGCCCAGTGCGGTGTGGGTGATATCCACG +
Preference number: 6 (lower is better)
Translates to: TTTPKEAATAPTNSR*RSGARPSAVWVIST
Trigger: CGTGGATATCACCCACACCGCACTGGGCCTGGCACCTGACCTCAACCTGCTATTAGTAGGGGCCGTGGCAGCCTCCTTGGGAGTTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp GGTGGGTCGATACGGGGAGCTGGGGGACATGGCCGAGCTTCATCCTaGAGCCGAGCGATCTCTGTGAAGACACTGGCCAGTGGTTGGAAC +
Preference number: 6 (lower is better)
Translates to: GGSIRGAGGHGRASS*SRAISVKTLASGWN
Trigger: GTTCCAACCACTGGCCAGTGTCTTCACAGAGATCGCTCGGCTCAAGGATGAAGCTCGGCCATGTCCCCCAGCTCCCCGTATCGACCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp GTCATTGGTGTCGATGACCATCACCGTCAAGGTAGCTaGGCCCACCAGGGCTGGGCTCCCTCTGTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: VIGVDDHHRQGS*AHQGWAPSVCG
Trigger: GCCACAGACAGAGGGAGCCCAGCCCTGGTGGGCTCAGCTACCTTGACGGTGATGGTCATCGACACCAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CCCGCACTGATGTCGCCAATCAGTGTACCCGCTGGCTaGTCCTCATCAATCTGCAAGTCCAGGCTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: PALMSPISVPAG*SSSICKSRLPA
Trigger: GGCTGGGAGCCTGGACTTGCAGATTGATGAGGAGCAGCCAGCGGGTACACTGATTGGCGACATCAGTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp TCTCGTGCTTGCACCACCAGTTCATGGACCCGCCGCTaGTCAAAGTCCAGTGGCCGCTCTAACTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SRACTTSSWTRR*SKSSGRSNCSS
Trigger: GCTGCTGCAGTTAGAGCGGCCACTGGACTTTGAGCAGCGGCGGGTCCATGAACTGGTGGTGCAAGCACGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp TGGCTCCAGGCCAAAGGGGCTACTTGCTCCCTCTGCTaGAAGGTGATAGGTGATAGGGCCCCCATCTGGTGC +
Preference number: 6 (lower is better)
Translates to: WLQAKGATCSLC*KVIGDRAPIWC
Trigger: GCACCAGATGGGGGCCCTATCACCTATCACCTTGCAGCAGAGGGAGCAAGTAGCCCCTTTGGCCTGGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CTGTGGCTCCAGGCCAAAGGGGCTACTTGCTCCCTCTaGTGCAAGGTGATAGGTGATAGGGCCCCCATCTGG +
Preference number: 6 (lower is better)
Translates to: LWLQAKGATCSL*CKVIGDRAPIW
Trigger: CCAGATGGGGGCCCTATCACCTATCACCTTGCAGCAGAGGGAGCAAGTAGCCCCTTTGGCCTGGAGCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CCACCCACTCTGTGGCTCCAGGCCAAAGGGGCTACTTaGTCCCTCTGCTGCAAGGTGATAGGTGATAGGGCC +
Preference number: 6 (lower is better)
Translates to: PPTLWLQAKGAT*SLCCKVIGDRA
Trigger: GGCCCTATCACCTATCACCTTGCAGCAGAGGGAGCAAGTAGCCCCTTTGGCCTGGAGCCACAGAGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TCAATGGCCAGGTCTGTGCCCACGCCGCTGCCCTCTTaGGCAGAGATGAAGTACATGAGAGGAGCTGCCGTG +
Preference number: 6 (lower is better)
Translates to: SMARSVPTPLPS*AEMKYMRGAAV
Trigger: CACGGCAGCTCCTCTCATGTACTTCATCTCTGCCCAAGAGGGCAGCGGCGTGGGCACAGACCTGGCCATTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GCAACGAGCTGTCCAGGTGGGGCGGCCTCAGACACTTaGGGGGAGCCATCTGCACTGAGAAAGATGACAGTC +
Preference number: 6 (lower is better)
Translates to: ATSCPGGAASDT*GEPSALRKMTV
Trigger: GACTGTCATCTTTCTCAGTGCAGATGGCTCCCCCCAAGTGTCTGAGGCCGCCCCACCTGGACAGCTCGTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CCCCGATCTCCAGCTGCACCACAGAATTGGCCCGTCTaGCCAAGGGCCAGGCTACTGTCAACAGCCCTGATT +
Preference number: 6 (lower is better)
Translates to: PRSPAAPQNWPV*PRARLLSTALI
Trigger: AATCAGGGCTGTTGACAGTAGCCTGGCCCTTGGCCAGACGGGCCAATTCTGTGGTGCAGCTGGAGATCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299441.5
ENST00000680123.1
CDS CCA 72 bp ACATCTGGATCAGAGGCCCGAAGCATGGTAAGGGTCTaGGGGTCCTGGCCCTCAGGCACCTCCAGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: TSGSEARSMVRV*GSWPSGTSRER
Trigger: TCTCTCTCTGGAGGTGCCTGAGGGCCAGGACCCCCAGACCCTTACCATGCTTCGGGCCTCTGATCCAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CACTGTCACTGTCAAAAGCAGCGTGGCACTGAGAGCTaGCTGGCCTCCATCCCGGGCCTCTATCCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: HCHCQKQRGTES*LASIPGLYPQL
Trigger: CAGCTGAGGATAGAGGCCCGGGATGGAGGCCAGCCAGCTCTCAGTGCCACGCTGCTTTTGACAGTGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CGTAGGCGCAGAGGACTGGTGGGGAAGGTGGGTGCATaGTCATTGACATCGCGCACCGTGATGGTGACAGAC +
Preference number: 6 (lower is better)
Translates to: RRRRGLVGKVGA*SLTSRTVMVTD
Trigger: GTCTGTCACCATCACGGTGCGCGATGTCAATGACCATGCACCCACCTTCCCCACCAGTCCTCTGCGCCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GCTGGGAAGAGTCTGGTGATAGAGGTGCTCAGAGGGTaGTGGACTAGGTGGCTCCCGGCCCAGTTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: AGKSLVIEVLRG*WTRWLPAQFLQ
Trigger: CTGCAGAAACTGGGCCGGGAGCCACCTAGTCCACCACCCTCTGAGCACCTCTATCACCAGACTCTTCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp CAGCAGCTGGAGGCTGGCACTTCGAGGAGGGCTGCCTaGGTCATGAGCACTCAGTGTCAGCACATAGTGGGG +
Preference number: 6 (lower is better)
Translates to: QQLEAGTSRRAA*VMSTQCQHIVG
Trigger: CCCCACTATGTGCTGACACTGAGTGCTCATGACCAAGGCAGCCCTCCTCGAAGTGCCAGCCTCCAGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp CTGTACTCCTGCTGCTGGAAAGTAGGCGCCTCGTCGTaGACGTCAGCGACACTGACGGTCAGGACCTGCGTG +
Preference number: 6 (lower is better)
Translates to: LYSCCWKVGASS*TSATLTVRTCV
Trigger: CACGCAGGTCCTGACCGTCAGTGTCGCTGACGTCAACGACGAGGCGCCTACTTTCCAGCAGCAGGAGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp GGGCCGCAGGAAACGGGGAGCATTGTCGTTGGCATCTaGCAGGGTCAGGGTCAGCACAGTGAAGGCAAAGGC +
Preference number: 6 (lower is better)
Translates to: GPQETGSIVVGI*QGQGQHSEGKG
Trigger: GCCTTTGCCTTCACTGTGCTGACCCTGACCCTGCAAGATGCCAACGACAATGCTCCCCGTTTCCTGCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp ACCTGCAGGGCAGCCCGAGCCTGTGGGAAGGCTGGAGCATGGTCGTaGATGTCAGCCACTCGCACTGTAACTTCTACGGTGGCACCATCA +
Preference number: 6 (lower is better)
Translates to: TCRAARACGKAGAWS*MSATRTVTSTVAPS
Trigger: TGATGGTGCCACCGTAGAAGTTACAGTGCGAGTGGCTGACATCAACGACCATGCTCCAGCCTTCCCACAGGCTCGGGCTGCCCTGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp GTGCCAGGAGGTGGTGTGCCTGCCAGCCGGTACAGAATGGAAGCATaGGCACCAGCATCACGATCTTCAGCTCTCAGTGTGGCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: VPGGGVPASRYRMEA*APASRSSALSVARA
Trigger: GGCTCTGGCCACACTGAGAGCTGAAGATCGTGATGCTGGTGCCAATGCTTCCATTCTGTACCGGCTGGCAGGCACACCACCTCCTGGCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp CTGTGTGCTCATAGTCAAAGGGCACTCGCGCACGCAACTCCCCTGTaGAGCTGTTCAGTGCAAATGCCTCACGGCCCTCAGGTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: LCAHSQRALAHATPL*SCSVQMPHGPQVLA
Trigger: GGCCAGGACCTGAGGGCCGTGAGGCATTTGCACTGAACAGCTCAACAGGGGAGTTGCGTGCGCGAGTGCCCTTTGACTATGAGCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp ACATGCACAGTCACAAAGGCCGAGCCCAGCTCAGGGTaGGCCCCACCATCTCGTGCTTGCACCACCAGTTCA +
Preference number: 6 (lower is better)
Translates to: TCTVTKAEPSSG*APPSRACTTSS
Trigger: TGAACTGGTGGTGCAAGCACGAGATGGTGGGGCTCACCCTGAGCTGGGCTCGGCCTTTGTGACTGTGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp CTCGATCCAGCCGCCGAGCCACACACACCAGATAGATaGCGCTGTCTTGGGTGCTTAGGGCAAAGTGGCCCT +
Preference number: 6 (lower is better)
Translates to: LDPAAEPHTPDR*RCLGCLGQSGP
Trigger: AGGGCCACTTTGCCCTAAGCACCCAAGACAGCGTCATCTATCTGGTGTGTGTGGCTCGGCGGCTGGATCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp CTGCACTTGCAGGACCTGAGTTCCAGCAGTGGTGCCTaGGGGCAGGTCCACACGGTAGGTAGGGCTGTTGAA +
Preference number: 6 (lower is better)
Translates to: LHLQDLSSSSGA*GQVHTVGRAVE
Trigger: TTCAACAGCCCTACCTACCGTGTGGACCTGCCCTCAGGCACCACTGCTGGAACTCAGGTCCTGCAAGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp CTGTTGCAGGCTGTAGGTCAGACGTCCATTGGGTCCTaGGTCTCGGTCAGTGGCAAAGACTCGGCCCACGCT +
Preference number: 6 (lower is better)
Translates to: LLQAVGQTSIGS*VSVSGKDSAHA
Trigger: AGCGTGGGCCGAGTCTTTGCCACTGACCGAGACTCAGGACCCAATGGACGTCTGACCTACAGCCTGCAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp CAGAGCGAGCTGGACGGCCAAGATCAGTGGCCACAATaGAGAGGACACGATCTCGGGGGCCTAGAGCTACAG +
Preference number: 6 (lower is better)
Translates to: QSELDGQDQWPQ*RGHDLGGLELQ
Trigger: CTGTAGCTCTAGGCCCCCGAGATCGTGTCCTCTTCATTGTGGCCACTGATCTTGGCCGTCCAGCTCGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp GTGGTCTCGTGCTTCCAGCACCACATCCACTGCTCCTaGCCCGTCATGGCCCAAGGCCACTGTTCCCACTAT +
Preference number: 6 (lower is better)
Translates to: VVSCFQHHIHCS*PVMAQGHCSHY
Trigger: ATAGTGGGAACAGTGGCCTTGGGCCATGACGGGTCAGGAGCAGTGGATGTGGTGCTGGAAGCACGAGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp AGGGGGCAGGTCTTCAGTCACAGCCACACGGTAGTGTaGCAATGTGAAGCTCGGGGCGTGGTCGTTCTGGTC +
Preference number: 6 (lower is better)
Translates to: RGQVFSHSHTVV*QCEARGVVVLV
Trigger: GACCAGAACGACCACGCCCCGAGCTTCACATTGTCACACTACCGTGTGGCTGTGACTGAAGACCTGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp TGTGCACCAGCAGGGTCAGCAGCCTGTACTACAAGCTaGTGTCGAGCCTGGGTCTCACAGTCCAGGGCATGG +
Preference number: 6 (lower is better)
Translates to: CAPAGSAACTTS*CRAWVSQSRAW
Trigger: CCATGCCCTGGACTGTGAGACCCAGGCTCGACATCAGCTTGTAGTACAGGCTGCTGACCCTGCTGGTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CACTGTAACTTCTACGGTGGCACCATCAGGAGTGACTaGAGTGAAGCGGTAGCGGTCCCGCTGCTCACGGTC +
Preference number: 6 (lower is better)
Translates to: HCNFYGGTIRSD*SEAVAVPLLTV
Trigger: GACCGTGAGCAGCGGGACCGCTACCGCTTCACTGCAGTCACTCCTGATGGTGCCACCGTAGAAGTTACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CATCGGCATCAGATGCGAACACCTGCAAGACAGGACTaGCAGGGGCCAGGCTCTCAGACACCACAGCATGGT +
Preference number: 6 (lower is better)
Translates to: HRHQMRTPARQD*QGPGSQTPQHG
Trigger: ACCATGCTGTGGTGTCTGAGAGCCTGGCCCCTGGCAGTCCTGTCTTGCAGGTGTTCGCATCTGATGCCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CCATTGACACCAGCATCGGCATCAGATGCGAACACCTaGAAGACAGGACTGCCAGGGGCCAGGCTCTCAGAC +
Preference number: 6 (lower is better)
Translates to: PLTPASASDANT*KTGLPGARLSD
Trigger: GTCTGAGAGCCTGGCCCCTGGCAGTCCTGTCTTGCAGGTGTTCGCATCTGATGCCGATGCTGGTGTCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GGTCAGGGTCATGGGCACGCAACCTCAGCACAGCTGTaGCTGGTGGACTCTGGGCACTTATACTGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: GQGHGHATSAQL*LVDSGHLYWQH
Trigger: ATGCTGCCAGTATAAGTGCCCAGAGTCCACCAGGCACAGCTGTGCTGAGGTTGCGTGCCCATGACCCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp TGCTGCAAGGTGATAGGTGATAGGGCCCCCATCTGGTaGTTGGGCCTGCACTTGCAGGACCTGAGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: CCKVIGDRAPIW*LGLHLQDLSSS
Trigger: GCTGGAACTCAGGTCCTGCAAGTGCAGGCCCAAGCACCAGATGGGGGCCCTATCACCTATCACCTTGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GGCCGCAGGAAACGGGGAGCATTGTCGTTGGCATCTTaGAGGGTCAGGGTCAGCACAGTGAAGGCAAAGGCT +
Preference number: 6 (lower is better)
Translates to: GRRKRGALSLAS*RVRVSTVKAKA
Trigger: AGCCTTTGCCTTCACTGTGCTGACCCTGACCCTGCAAGATGCCAACGACAATGCTCCCCGTTTCCTGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp AAGCCCCGCACTGATGTCGCCAATCAGTGTACCCGCTaGCTGCTCCTCATCAATCTGCAAGTCCAGGCTCCC +
Preference number: 6 (lower is better)
Translates to: KPRTDVANQCTR*LLLINLQVQAP
Trigger: GGGAGCCTGGACTTGCAGATTGATGAGGAGCAGCCAGCGGGTACACTGATTGGCGACATCAGTGCGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CAGACGCCCAGCATCTGCATCACGAGCAGGCTCCAGTaGGTAGCGGGTGCCAAAAGCTGTATGCTCAGGTAC +
Preference number: 6 (lower is better)
Translates to: QTPSICITSRLQ*VAGAKSCMLRY
Trigger: GTACCTGAGCATACAGCTTTTGGCACCCGCTACCCACTGGAGCCTGCTCGTGATGCAGATGCTGGGCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TGTGCACACATCACCGCTGTGGGCATCAATGCGGAATaGGGGAGATCCGGAGGACCCAAGTCCAGCACCCAA +
Preference number: 6 (lower is better)
Translates to: CAHITAVGINAE*GRSGGPKSSTQ
Trigger: TTGGGTGCTGGACTTGGGTCCTCCGGATCTCCCCCATTCCGCATTGATGCCCACAGCGGTGATGTGTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GTCATGGGCACGCAACCTCAGCACAGCTGTGCCTGGTaGACTCTGGGCACTTATACTGGCAGCATACTCCCG +
Preference number: 6 (lower is better)
Translates to: VMGTQPQHSCAW*TLGTYTGSILP
Trigger: CGGGAGTATGCTGCCAGTATAAGTGCCCAGAGTCCACCAGGCACAGCTGTGCTGAGGTTGCGTGCCCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CTCTGCTGCAAGGTGATAGGTGATAGGGCCCCCATCTaGTGCTTGGGCCTGCACTTGCAGGACCTGAGTTCC +
Preference number: 6 (lower is better)
Translates to: LCCKVIGDRAPI*CLGLHLQDLSS
Trigger: GGAACTCAGGTCCTGCAAGTGCAGGCCCAAGCACCAGATGGGGGCCCTATCACCTATCACCTTGCAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GATGCGGTACTGCAACTGCCCATTGGCTCCCACATCTaGATCAGAGGCCCGAAGCATGGTAAGGGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: DAVLQLPIGSHI*IRGPKHGKGLG
Trigger: CCCCAGACCCTTACCATGCTTCGGGCCTCTGATCCAGATGTGGGAGCCAATGGGCAGTTGCAGTACCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GGTCCCCATCTAGGATGCGGTACTGCAACTGCCCATTaGCTCCCACATCTGGATCAGAGGCCCGAAGCATGG +
Preference number: 6 (lower is better)
Translates to: GPHLGCGTATAH*LPHLDQRPEAW
Trigger: CCATGCTTCGGGCCTCTGATCCAGATGTGGGAGCCAATGGGCAGTTGCAGTACCGCATCCTAGATGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GTCACTGTCAAAAGCAGCGTGGCACTGAGAGCTGGCTaGCCTCCATCCCGGGCCTCTATCCTCAGCTGGAAA +
Preference number: 6 (lower is better)
Translates to: VTVKSSVALRAG*PPSRASILSWK
Trigger: TTTCCAGCTGAGGATAGAGGCCCGGGATGGAGGCCAGCCAGCTCTCAGTGCCACGCTGCTTTTGACAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp GCAGCCCGAGCCTGTGGGAAGGCTGGAGCATGGTCGTaGATGTCAGCCACTCGCACTGTAACTTCTACGGTG +
Preference number: 6 (lower is better)
Translates to: AARACGKAGAWS*MSATRTVTSTV
Trigger: CACCGTAGAAGTTACAGTGCGAGTGGCTGACATCAACGACCATGCTCCAGCCTTCCCACAGGCTCGGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp GTTGCTCGCAGGGTGAGCAGAGATGTGCCAGGAGGGTaGTTCTCACGCAAGAGGACGCTGTACTCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VARRVSRDVPGG*FSRKRTLYSCC
Trigger: GCAGCAGGAGTACAGCGTCCTCTTGCGTGAGAACAACCCTCCTGGCACATCTCTGCTCACCCTGCGAGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp GGGTCCCCATCTAGGATGCGGTACTGCAACTGCCCATaGGCTCCCACATCTGGATCAGAGGCCCGAAGCATG +
Preference number: 6 (lower is better)
Translates to: GSPSRMRYCNCP*APTSGSEARSM
Trigger: CATGCTTCGGGCCTCTGATCCAGATGTGGGAGCCAATGGGCAGTTGCAGTACCGCATCCTAGATGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp CATCATCCTCTGCAGCCTCTGCTGATCCTCGGCCACTaGAATGTGAAGGGTCCAAGGAGCCACCACGGGGGT +
Preference number: 6 (lower is better)
Translates to: HHPLQPLLILGH*NVKGPRSHHGG
Trigger: ACCCCCGTGGTGGCTCCTTGGACCCTTCACATTCAAGTGGCCGAGGATCAGCAGAGGCTGCAGAGGATGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp GAGCCGAGCGATCTCTGTGAAGACACTGGCCAGTGGTaGGAACTGAGGGCACCAGCTCAGCAGGTAGTCCCA +
Preference number: 6 (lower is better)
Translates to: EPSDLCEDTGQW*ELRAPAQQVVP
Trigger: TGGGACTACCTGCTGAGCTGGTGCCCTCAGTTCCAACCACTGGCCAGTGTCTTCACAGAGATCGCTCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp ATACGGGGAGCTGGGGGACATGGCCGAGCTTCATCCTaGAGCCGAGCGATCTCTGTGAAGACACTGGCCAGT +
Preference number: 6 (lower is better)
Translates to: IRGAGGHGRASS*SRAISVKTLAS
Trigger: ACTGGCCAGTGTCTTCACAGAGATCGCTCGGCTCAAGGATGAAGCTCGGCCATGTCCCCCAGCTCCCCGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp TCGGGGTCGGTTGCTCGCAGGGTGAGCAGAGATGTGCCAGGAGGGTaGTTCTCACGCAAGAGGACGCTGTACTCCTGCTGCTGGAAAGTA +
Preference number: 6 (lower is better)
Translates to: SGSVARRVSRDVPGG*FSRKRTLYSCCWKV
Trigger: TACTTTCCAGCAGCAGGAGTACAGCGTCCTCTTGCGTGAGAACAACCCTCCTGGCACATCTCTGCTCACCCTGCGAGCAACCGACCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp GCTCCTGATGGGTCCCCATCTAGGATGCGGTACTGCAACTGCCCATaGGCTCCCACATCTGGATCAGAGGCCCGAAGCATGGTAAGGGTC +
Preference number: 6 (lower is better)
Translates to: APDGSPSRMRYCNCP*APTSGSEARSMVRV
Trigger: GACCCTTACCATGCTTCGGGCCTCTGATCCAGATGTGGGAGCCAATGGGCAGTTGCAGTACCGCATCCTAGATGGGGACCCATCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp AGACGTAGGCGCAGAGGACTGGTGGGGAAGGTGGGTGCATGGTCATaGACATCGCGCACCGTGATGGTGACAGACACTGTGGTGCTTAGG +
Preference number: 6 (lower is better)
Translates to: RRRRRGLVGKVGAWS*TSRTVMVTDTVVLR
Trigger: CCTAAGCACCACAGTGTCTGTCACCATCACGGTGCGCGATGTCAATGACCATGCACCCACCTTCCCCACCAGTCCTCTGCGCCTACGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp TCTTCTGACACTCGGAGCTCCCAGGGTTGGGGGATGGTGGGGCGATaGTCATTGGTGTCGATGACCATCACCGTCAAGGTAGCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: SSDTRSSQGWGMVGR*SLVSMTITVKVAEP
Trigger: GGGCTCAGCTACCTTGACGGTGATGGTCATCGACACCAATGACAATCGCCCCACCATCCCCCAACCCTGGGAGCTCCGAGTGTCAGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp GGTCAAGAGCCCGCAGTGTATAGATGGGAGTCCCTGGGGCAGTGTTaGGTGGTAGCAATACCGTGTCTTCAGGTGCAGGAAAGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: GQEPAVYRWESLGQC*VVAIPCLQVQERQG
Trigger: CCCCTGCCTTTCCTGCACCTGAAGACACGGTATTGCTACCACCAAACACTGCCCCAGGGACTCCCATCTATACACTGCGGGCTCTTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp ATAGTCAAAGGGCACTCGCGCACGCAACTCCCCTGTTaGGCTGTTCAGTGCAAATGCCTCACGGCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: IVKGHSRTQLPC*AVQCKCLTALR
Trigger: CCTGAGGGCCGTGAGGCATTTGCACTGAACAGCTCAACAGGGGAGTTGCGTGCGCGAGTGCCCTTTGACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp GAGAGGAGGCCACACTGGCCACACGGGGGAACTCATTaGTCATGCGGATCTCATCATCCTCTGCAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: ERRPHWPHGGTH*SCGSHHPLQPL
Trigger: CAGAGGCTGCAGAGGATGATGAGATCCGCATGATCAATGAGTTCCCCCGTGTGGCCAGTGTGGCCTCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GTAAGAGTCCACAGTAGTGCCAGGAGGTGGTGTGCCTaGCAGCCGGTACAGAATGGAAGCATTGGCACCAGC +
Preference number: 6 (lower is better)
Translates to: VRVHSSARRWCA*QPVQNGSIGTS
Trigger: GCTGGTGCCAATGCTTCCATTCTGTACCGGCTGGCAGGCACACCACCTCCTGGCACTACTGTGGACTCTTAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GAGAATGCTGTAGGTGATGGGTCCATTTGTGCCTCCTaGATGGACGGCCCTGGGGGAGACAATAGGAGTCCC +
Preference number: 6 (lower is better)
Translates to: ENAVGDGSICAS*MDGPGGDNRSP
Trigger: GGGACTCCTATTGTCTCCCCCAGGGCCGTCCATGCAGGAGGCACAAATGGACCCATCACCTACAGCATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp AGTCCCGATCAGTGGCAGAGACGGAGAGAATGGCACTaGCTGGGGGTGTGTGCTCAAGCAGCATTACCTGGT +
Preference number: 6 (lower is better)
Translates to: SPDQWQRRREWH*LGVCAQAALPG
Trigger: ACCAGGTAATGCTGCTTGAGCACACACCCCCAGGCAGTGCCATTCTCTCCGTCTCTGCCACTGATCGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GTGACAGTGACTGGCACGACTGAGCTTTGGGGTGGCTaGCCACGGTCAGCTGCAGCCACTGTTAGATTGTAC +
Preference number: 6 (lower is better)
Translates to: VTVTGTTELWGG*PRSAAATVRLY
Trigger: GTACAATCTAACAGTGGCTGCAGCTGACCGTGGGCAGCCACCCCAAAGCTCAGTCGTGCCAGTCACTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp ACAGCTGTCACTGTGAAGTCAAAGCTTGAGGGCCCCTaGTCACGGTCCAGGGTCCGGGTTGTGCACACATCA +
Preference number: 6 (lower is better)
Translates to: TAVTVKSKLEGP*SRSRVRVVHTS
Trigger: TGATGTGTGCACAACCCGGACCCTGGACCGTGACCAGGGGCCCTCAAGCTTTGACTTCACAGTGACAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GTGGGATCCTCAGACAAGCGGGGACTGTGTTCATTCTaGTTGAGGATGCTGACCCTCACGGTGGCTGTGCCT +
Preference number: 6 (lower is better)
Translates to: VGSSDKRGLCSF*LRMLTLTVAVP
Trigger: AGGCACAGCCACCGTGAGGGTCAGCATCCTCAACCAGAATGAACACAGTCCCCGCTTGTCTGAGGATCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GCTGTGGTAGTGATAGTGCCTGTGGTTGGGTCTACGTaGAACAATCCACGTGCCGGCTGGGATGCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: AVVVIVPVVGST*NNPRAGWDAAR
Trigger: TCTGGCTGCATCCCAGCCGGCACGTGGATTGTTCCACGTAGACCCAACCACAGGCACTATCACTACCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GTCCAGGATGGCTGTGGTAGTGATAGTGCCTGTGGTTaGGTCTACGTGGAACAATCCACGTGCCGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: VQDGCGSDSACG*VYVEQSTCRLG
Trigger: TCCCAGCCGGCACGTGGATTGTTCCACGTAGACCCAACCACAGGCACTATCACTACCACAGCCATCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TCTAGTACAGTGACAGTGACTGGCACGACTGAGCTTTaGGGTGGCTGCCCACGGTCAGCTGCAGCCACTGTT +
Preference number: 6 (lower is better)
Translates to: SSTVTVTGTTEL*GGCPRSAAATV
Trigger: AACAGTGGCTGCAGCTGACCGTGGGCAGCCACCCCAAAGCTCAGTCGTGCCAGTCACTGTCACTGTACTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CTGTGGCCACGCCGGGCACCTTCGGGCACTTGGAAGTaGAAAGCTGGTGCCAGAAATACAGGGTCATACTCA +
Preference number: 6 (lower is better)
Translates to: LWPRRAPSGTWK*KAGARNTGSYS
Trigger: TGAGTATGACCCTGTATTTCTGGCACCAGCTTTCCACTTCCAAGTGCCCGAAGGTGCCCGGCGTGGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CTTGAGCCGAGCGATCTCTGTGAAGACACTGGCCAGTaGTTGGAACTGAGGGCACCAGCTCAGCAGGTAGTC +
Preference number: 6 (lower is better)
Translates to: LEPSDLCEDTGQ*LELRAPAQQVV
Trigger: GACTACCTGCTGAGCTGGTGCCCTCAGTTCCAACCACTGGCCAGTGTCTTCACAGAGATCGCTCGGCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp GGATCCTCAGACAAGCGGGGACTGTGTTCATTCTGGTaGAGGATGCTGACCCTCACGGTGGCTGTGCCTGTC +
Preference number: 6 (lower is better)
Translates to: GSSDKRGLCSFW*RMLTLTVAVPV
Trigger: GACAGGCACAGCCACCGTGAGGGTCAGCATCCTCAACCAGAATGAACACAGTCCCCGCTTGTCTGAGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp AGCTCCCAGGGTTGGGGGATGGTGGGGCGATTGTCATaGGTGTCGATGACCATCACCGTCAAGGTAGCTGAG +
Preference number: 6 (lower is better)
Translates to: SSQGWGMVGRLS*VSMTITVKVAE
Trigger: CTCAGCTACCTTGACGGTGATGGTCATCGACACCAATGACAATCGCCCCACCATCCCCCAACCCTGGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp CATAGTCAAAGGGCACTCGCGCACGCAACTCCCCTGTaGAGCTGTTCAGTGCAAATGCCTCACGGCCCTCAG +
Preference number: 6 (lower is better)
Translates to: HSQRALAHATPL*SCSVQMPHGPQ
Trigger: CTGAGGGCCGTGAGGCATTTGCACTGAACAGCTCAACAGGGGAGTTGCGTGCGCGAGTGCCCTTTGACTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp GGTGGTAGCAATACCGTGTCTTCAGGTGCAGGAAAGGCAGGGGAGTaGTCATTCACATCATCCAGCAGCACACGCACCCGAGCTACAGCG +
Preference number: 6 (lower is better)
Translates to: GGSNTVSSGAGKAGE*SFTSSSSTRTRATA
Trigger: CGCTGTAGCTCGGGTGCGTGTGCTGCTGGATGATGTGAATGACAACTCCCCTGCCTTTCCTGCACCTGAAGACACGGTATTGCTACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GGTCCCAGTAGCTCCCGGTCCAGAGGGCGAAGTGTTTaGAACAGTCCTGATACCGCATCTAGGGAGAAGAGT +
Preference number: 6 (lower is better)
Translates to: GPSSSRSRGRSV*NSPDTASREKS
Trigger: ACTCTTCTCCCTAGATGCGGTATCAGGACTGTTGCAAACACTTCGCCCTCTGGACCGGGAGCTACTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp AAGGCTCCTGATGGGTCCCCATCTAGGATGCGGTACTaGAACTGCCCATTGGCTCCCACATCTGGATCAGAG +
Preference number: 6 (lower is better)
Translates to: KAPDGSPSRMRY*NCPLAPTSGSE
Trigger: CTCTGATCCAGATGTGGGAGCCAATGGGCAGTTGCAGTACCGCATCCTAGATGGGGACCCATCAGGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp AGTGCCTGTGGTTGGGTCTACGTGGAACAATCCACGTaGCGGCTGGGATGCAGCCAGACTGTAGGAAATCTG +
Preference number: 6 (lower is better)
Translates to: SACGWVYVEQST*RLGCSQTVGNL
Trigger: CAGATTTCCTACAGTCTGGCTGCATCCCAGCCGGCACGTGGATTGTTCCACGTAGACCCAACCACAGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GTGGTGTGCCTGCCAGCCGGTACAGAATGGAAGCATTaGCACCAGCATCACGATCTTCAGCTCTCAGTGTGG +
Preference number: 6 (lower is better)
Translates to: VVCLPAGTEWKH*HQHHDLQLSVW
Trigger: CCACACTGAGAGCTGAAGATCGTGATGCTGGTGCCAATGCTTCCATTCTGTACCGGCTGGCAGGCACACCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TGCCTTTCGGCCCTTATACCAGGTGTCAGGGGCAGGTaGTTCGCAGGATGTGTCACTCAGACCATCTGCATC +
Preference number: 6 (lower is better)
Translates to: CLSALIPGVRGR*FAGCVTQTICI
Trigger: GATGCAGATGGTCTGAGTGACACATCCTGCGAACCACCTGCCCCTGACACCTGGTATAAGGGCCGAAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp GGTGGTGTGCCTGCCAGCCGGTACAGAATGGAAGCATaGGCACCAGCATCACGATCTTCAGCTCTCAGTGTG +
Preference number: 6 (lower is better)
Translates to: GGVPASRYRMEA*APASRSSALSV
Trigger: CACACTGAGAGCTGAAGATCGTGATGCTGGTGCCAATGCTTCCATTCTGTACCGGCTGGCAGGCACACCACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CACCTCCAGAGAGAGATGGGCACTCCCAAAGGTTGGTaGATGGTCATTCTCATCCTCCACAGCCACTCGAAC +
Preference number: 6 (lower is better)
Translates to: HLQREMGTPKGW*MVILILHSHSN
Trigger: GTTCGAGTGGCTGTGGAGGATGAGAATGACCATGCACCAACCTTTGGGAGTGCCCATCTCTCTCTGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CCGGGCACCTTCGGGCACTTGGAAGTGGAAAGCTGGTaGCAGAAATACAGGGTCATACTCATCCTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: PGTFGHLEVESW*QKYRVILILSS
Trigger: ACTGGAGAGGATGAGTATGACCCTGTATTTCTGGCACCAGCTTTCCACTTCCAAGTGCCCGAAGGTGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GCACAGCTGTGCCTGGTGGACTCTGGGCACTTATACTaGCAGCATACTCCCGTGGATAAAACTGAGGAGGGT +
Preference number: 6 (lower is better)
Translates to: AQLCLVDSGHLY*QHTPVDKTEEG
Trigger: ACCCTCCTCAGTTTTATCCACGGGAGTATGCTGCCAGTATAAGTGCCCAGAGTCCACCAGGCACAGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp CAGTCCAACAATGATCACACCAGTGGCAGAGCGAGCTaGACGGCCAAGATCAGTGGCCACAATGAAGAGGAC +
Preference number: 6 (lower is better)
Translates to: QSNNDHTSGRAS*TAKISGHNEED
Trigger: GTCCTCTTCATTGTGGCCACTGATCTTGGCCGTCCAGCTCGCTCTGCCACTGGTGTGATCATTGTTGGACTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp AATAACGCATCTTCTGACACTCGGAGCTCCCAGGGTTaGGGGATGGTGGGGCGATTGTCATTGGTGTCGATG +
Preference number: 6 (lower is better)
Translates to: NNASSDTRSSQG*GMVGRLSLVSM
Trigger: CATCGACACCAATGACAATCGCCCCACCATCCCCCAACCCTGGGAGCTCCGAGTGTCAGAAGATGCGTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp CCCGCAGTGTATAGATGGGAGTCCCTGGGGCAGTGTTaGGTGGTAGCAATACCGTGTCTTCAGGTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: PAVYRWESLGQC*VVAIPCLQVQE
Trigger: TTCCTGCACCTGAAGACACGGTATTGCTACCACCAAACACTGCCCCAGGGACTCCCATCTATACACTGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp ACGGTGGCTGTGCCTGTCTGCTGCCCCAACTCAGCTTaGGACCCAGACACTGCCATTACCTTCAGTATGTAC +
Preference number: 6 (lower is better)
Translates to: TVAVPVCCPNSA*DPDTAITFSMY
Trigger: GTACATACTGAAGGTAATGGCAGTGTCTGGGTCCAAAGCTGAGTTGGGGCAGCAGACAGGCACAGCCACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp TCAGTGGGAAGGCTGGGCCATGATCATTCACATCCTGGACCTCAATaGTCACTGGTGCCAAAGCAAAGTGTGCACCAGCAGGGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: SVGRLGHDHSHPGPQ*SLVPKQSVHQQGQQ
Trigger: CTGCTGACCCTGCTGGTGCACACTTTGCTTTGGCACCAGTGACAATTGAGGTCCAGGATGTGAATGATCATGGCCCAGCCTTCCCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp TTCATCCTTGAGCCGAGCGATCTCTGTGAAGACACTGGCCAGTGGTaGGAACTGAGGGCACCAGCTCAGCAGGTAGTCCCAGTTATAGCT +
Preference number: 6 (lower is better)
Translates to: FILEPSDLCEDTGQW*ELRAPAQQVVPVIA
Trigger: AGCTATAACTGGGACTACCTGCTGAGCTGGTGCCCTCAGTTCCAACCACTGGCCAGTGTCTTCACAGAGATCGCTCGGCTCAAGGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp AGCAAGCAGGGTAAAGGTGACTCGACTGTTAACACCTaGGTCGGGGTCAAGAGCCCGCAGTGTATAGATGGG +
Preference number: 6 (lower is better)
Translates to: SKQGKGDSTVNT*VGVKSPQCIDG
Trigger: CCCATCTATACACTGCGGGCTCTTGACCCCGACTCAGGTGTTAACAGTCGAGTCACCTTTACCCTGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp CCTCCTGTTCCTCTCGATCCAGGGCCCGAAGAGTCGTaGGAACACCAGTGTCAGGATCCAGAGAAAAGCTTT +
Preference number: 6 (lower is better)
Translates to: PPVPLDPGPEES*EHQCQDPEKSF
Trigger: AAAGCTTTTCTCTGGATCCTGACACTGGTGTTCTCACGACTCTTCGGGCCCTGGATCGAGAGGAACAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp CATGGTCATTCTCATCCTCCACAGCCACTCGAACAGTaGCATGCGTTAACTGAGGAGGTGAGCCCCTGTCCT +
Preference number: 6 (lower is better)
Translates to: HGHSHPPQPLEQ*HALTEEVSPCP
Trigger: AGGACAGGGGCTCACCTCCTCAGTTAACGCATGTCACTGTTCGAGTGGCTGTGGAGGATGAGAATGACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp AAGCTGGCTCCACTTCTCTGTCTAGTGGCCGCATGGTaGCAAACTCTCCAGAAGCAAGGTCTAGGACAAAGG +
Preference number: 6 (lower is better)
Translates to: KLAPLLCLVAAW*QTLQKQGLGQR
Trigger: CCTTTGTCCTAGACCTTGCTTCTGGAGAGTTTGGCACCATGCGGCCACTAGACAGAGAAGTGGAGCCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp CTGGACCTCAATTGTCACTGGTGCCAAAGCAAAGTGTaGACCAGCAGGGTCAGCAGCCTGTACTACAAGCTG +
Preference number: 6 (lower is better)
Translates to: LDLNCHWCQSKV*TSRVSSLYYKL
Trigger: CAGCTTGTAGTACAGGCTGCTGACCCTGCTGGTGCACACTTTGCTTTGGCACCAGTGACAATTGAGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp GTGGGTATAAAGCTAAATGATACCTGGTGGGTTGTGTaGCTGGACTATGCCCACACTGGTGCCTGGTGCCAC +
Preference number: 6 (lower is better)
Translates to: VGIKLNDTWWVV*LDYAHTGAWCH
Trigger: GTGGCACCAGGCACCAGTGTGGGCATAGTCCAGGCACACAACCCACCAGGTATCATTTAGCTTTATACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680123.1
CDS CCA 72 bp AAAGCTCTGAGCCAGGACCAGTTAGCGTGTACAAGATaGTCCCATTCTCCCCCTCATCTGGATCCTTCGCCT +
Preference number: 6 (lower is better)
Translates to: KALSQDQLACTR*SHSPPHLDPSP
Trigger: AGGCGAAGGATCCAGATGAGGGGGAGAATGGGACCATCTTGTACACGCTAACTGGTCCTGGCTCAGAGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp TTCACCAGTGTAAGAGTCCACAGTAGTGCCAGGAGGTaGTGTGCCTGCCAGCCGGTACAGAATGGAAGCATT +
Preference number: 6 (lower is better)
Translates to: FTSVRVHSSARR*CACQPVQNGSI
Trigger: AATGCTTCCATTCTGTACCGGCTGGCAGGCACACCACCTCCTGGCACTACTGTGGACTCTTACACTGGTGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp AATACCGTGTCTTCAGGTGCAGGAAAGGCAGGGGAGTaGTCATTCACATCATCCAGCAGCACACGCACCCGA +
Preference number: 6 (lower is better)
Translates to: NTVSSGAGKAGE*SFTSSSSTRTR
Trigger: TCGGGTGCGTGTGCTGCTGGATGATGTGAATGACAACTCCCCTGCCTTTCCTGCACCTGAAGACACGGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 90 bp GAGCTTTGGGGTGGCTGCCCACGGTCAGCTGCAGCCACTGTTAGATaGTACTGTGTCAGGCTTTCAAAGTCTAGAGGTTCAAGCAACACC +
Preference number: 6 (lower is better)
Translates to: ELWGGCPRSAAATVR*YCVRLSKSRGSSNT
Trigger: GGTGTTGCTTGAACCTCTAGACTTTGAAAGCCTGACACAGTACAATCTAACAGTGGCTGCAGCTGACCGTGGGCAGCCACCCCAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS GCA 72 bp TGTCTGCTGCCCCAACTCAGCTTTGGACCCAGACACTaGCATTACCTTCAGTATGTACAATTCCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: CLLPQLSFGPRH*HYLQYVQFLGL
Trigger: GAGGCCCAGGAATTGTACATACTGAAGGTAATGGCAGTGTCTGGGTCCAAAGCTGAGTTGGGGCAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CCA 72 bp GCCATGATCATTCACATCCTGGACCTCAATTGTCACTaGTGCCAAAGCAAAGTGTGCACCAGCAGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: AMIIHILDLNCH*CQSKVCTSRVS
Trigger: GCTGACCCTGCTGGTGCACACTTTGCTTTGGCACCAGTGACAATTGAGGTCCAGGATGTGAATGATCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS CAA 72 bp AGGCTGGGCCATGATCATTCACATCCTGGACCTCAATaGTCACTGGTGCCAAAGCAAAGTGTGCACCAGCAG +
Preference number: 6 (lower is better)
Translates to: RLGHDHSHPGPQ*SLVPKQSVHQQ
Trigger: CTGCTGGTGCACACTTTGCTTTGGCACCAGTGACAATTGAGGTCCAGGATGTGAATGATCATGGCCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299441.5
CDS TCA 72 bp TATTTGGGTCTGACACCAAGTGGGTATAAAGCTAAATaGTACCTGGTGGGTTGTGTGCCTGGACTATGCCCA +
Preference number: 6 (lower is better)
Translates to: YLGLTPSGYKAK*YLVGCVPGLCP
Trigger: TGGGCATAGTCCAGGCACACAACCCACCAGGTATCATTTAGCTTTATACCCACTTGGTGTCAGACCCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680123.1
CDS TCA 72 bp GATGGTGCTGGAGGGTTATACTGGGGTATTTGGGTCTaGCACCAAGTGGGTATAAAGCTAAATGATACCTGG +
Preference number: 6 (lower is better)
Translates to: DGAGGLYWGIWV*HQVGIKLNDTW
Trigger: CCAGGTATCATTTAGCTTTATACCCACTTGGTGTCAGACCCAAATACCCCAGTATAACCCTCCAGCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680123.1