Pregenerated sensors for DCDC2B (Homo sapiens)
Ensembl gene IDs: ENSG00000222046Ensembl transcript IDs: ENST00000409358.1, ENST00000409358.2, ENST00000487056.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGCAGGAGAACGGGGAGGGCTGAGGAGGCCGCAGTGTACCCTGTaGGCCCAGCGGAGGTGCTGGCTCCTGAGGAACAAGCTGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: GAGERGGLRRPQCTL*AQRRCWLLRNKLLE Trigger: CTCCAGCAGCTTGTTCCTCAGGAGCCAGCACCTCCGCTGGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCCCCGTTCTCCTGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409358.1 |
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| 3UTR TCA 90 bp | GGAGGCCGCAGTGTACCCTGTGAGCCCAGCGGAGGTGCTGGCTCCTaGGGAACAAGCTGCTGGAGGCTAAGGACAAAAGGTGGCCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: GGRSVPCEPSGGAGS*GTSCWRLRTKGGQS Trigger: ACTCTGGCCACCTTTTGTCCTTAGCCTCCAGCAGCTTGTTCCTCAGGAGCCAGCACCTCCGCTGGGCTCACAGGGTACACTGCGGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409358.1 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAATAGCCCCCACAGCCAGGGCTGCTCTGCTCAGAGGAAGGGAAGGCTGGCCGCAGTGTACCCTGTaGGCCCAGCGGAGGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: KEIAPTARAALLRGREGWPQCTL*AQRRCW Trigger: CCAGCACCTCCGCTGGGCTCACAGGGTACACTGCGG...CCAGCCTTCCCTTCCTCTGAGCAGAGCAGCCCTGGCTGTGGGGGCTATTTCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409358.1 |
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| 3UTR-3UTR CCA 90 bp | AAACCCTCTCCCAGGCTTAGTCAGCTACTCCTTTCTCTGGCCAGAGAATCCCATGCCCAGCGGAGGTGCTaGCTCCTGAGGAACAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KPSPRLSQLLLSLARESHAQRRC*LLRNKL Trigger: CAGCTTGTTCCTCAGGAGCCAGCACCTCCGCTGGGC...ATGGGATTCTCTGGCCAGAGAAAGGAGTAGCTGACTAAGCCTGGGAGAGGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409358.1 |
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| 3UTR TCA 72 bp | GAACGGGGAGGGCTGAGGAGGCCGCAGTGTACCCTGTaGGCCCAGCGGAGGTGCTGGCTCCTGAGGAACAAG | + |
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Preference number: 3 (lower is better) Translates to: ERGGLRRPQCTL*AQRRCWLLRNK Trigger: CTTGTTCCTCAGGAGCCAGCACCTCCGCTGGGCTCACAGGGTACACTGCGGCCTCCTCAGCCCTCCCCGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409358.1 |
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| CDS CCA 90 bp | GTGGGGCCTGCACAGCTGATGTCACCTCGCAGAGGAAGGCCTCCATaGTGGGGAAGCGGCGTTGAGTCACCACCAGCTGGGAGCCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VGPAQLMSPRRGRPP*WGSGVESPPAGSLG Trigger: TCCCAGGCTCCCAGCTGGTGGTGACTCAACGCCGCTTCCCCACCATGGAGGCCTTCCTCTGCGAGGTGACATCAGCTGTGCAGGCCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 90 bp | GGGCCTGCACAGCTGATGTCACCTCGCAGAGGAAGGCCTCCATGGTaGGGAAGCGGCGTTGAGTCACCACCAGCTGGGAGCCTGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: GPAQLMSPRRGRPPW*GSGVESPPAGSLGR Trigger: TCTTCCCAGGCTCCCAGCTGGTGGTGACTCAACGCCGCTTCCCCACCATGGAGGCCTTCCTCTGCGAGGTGACATCAGCTGTGCAGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS TCA 90 bp | GATGTCACCTCGCAGAGGAAGGCCTCCATGGTGGGGAAGCGGCGTTaGGTCACCACCAGCTGGGAGCCTGGGAAGAATGGGTCCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: DVTSQRKASMVGKRR*VTTSWEPGKNGSPF Trigger: GAATGGGGACCCATTCTTCCCAGGCTCCCAGCTGGTGGTGACTCAACGCCGCTTCCCCACCATGGAGGCCTTCCTCTGCGAGGTGACATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 90 bp | GGGGAAGCGGCGTTGAGTCACCACCAGCTGGGAGCCTGGGAAGAATaGGTCCCCATTCCGGTACACCACTACCCTCTTGGCTGCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: GEAALSHHQLGAWEE*VPIPVHHYPLGCWT Trigger: AGTCCAGCAGCCAAGAGGGTAGTGGTGTACCGGAATGGGGACCCATTCTTCCCAGGCTCCCAGCTGGTGGTGACTCAACGCCGCTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS GCA 90 bp | CCTGCTCCCTCACACTGGCACTCACTGGATATAGCTGGGAGCACCTaGAGGCAGCTGCCGTCCAATGGCCCCATCACACAAGTGGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: PAPSHWHSLDIAGST*RQLPSNGPITQVAS Trigger: ACTCGCCACTTGTGTGATGGGGCCATTGGACGGCAGCTGCCTGCAGGTGCTCCCAGCTATATCCAGTGAGTGCCAGTGTGAGGGAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS GCA 90 bp | TGCCCTCTGATCCAAGGGCTCCTCTGTCTGAGTGTCTTCATCATCTaGTACTTCCAGGGCCCCCGCTGTCTCCTTCCTTCGGTGGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: CPLIQGLLCLSVFII*YFQGPRCLLPSVGS Trigger: GCTCCCCACCGAAGGAAGGAGACAGCGGGGGCCCTGGAAGTAGCAGATGATGAAGACACTCAGACAGAGGAGCCCTTGGATCAGAGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS GCA 90 bp | CTTCACATTCAGCAGACTGAAGGGGTGGGTGCAGCTATTCCAAGGTaGCCTCTGGCCTCTAGGCACCCAGGCTCTACCCTGCCTCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LHIQQTEGVGAAIPR*PLASRHPGSTLPLR Trigger: CCTCAGAGGCAGGGTAGAGCCTGGGTGCCTAGAGGCCAGAGGGCACCTTGGAATAGCTGCACCCACCCCTTCAGTCTGCTGAATGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS CCA 90 bp | CATCAACACCCCTGCTCCCTCACACTGGCACTCACTGGATATAGCTaGGAGCACCTGCAGGCAGCTGCCGTCCAATGGCCCCATCACACA | + |
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Preference number: 5 (lower is better) Translates to: HQHPCSLTLALTGYS*EHLQAAAVQWPHHT Trigger: TGTGTGATGGGGCCATTGGACGGCAGCTGCCTGCAGGTGCTCCCAGCTATATCCAGTGAGTGCCAGTGTGAGGGAGCAGGGGTGTTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS CCA 90 bp | GCTCCTTCCCTGCTGACAGTGGGAGCCCCTCTAGGGTGCAGAGTCTaGGAGAGAGAGGTGAGGAGGATAAGGGCTGGTAGACTCGATGCT | + |
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Preference number: 5 (lower is better) Translates to: APSLLTVGAPLGCRV*EREVRRIRAGRLDA Trigger: AGCATCGAGTCTACCAGCCCTTATCCTCCTCACCTCTCTCTCCCAGACTCTGCACCCTAGAGGGGCTCCCACTGTCAGCAGGGAAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS GCA 90 bp | CAGTTACCAGCTCCTTCCCTGCTGACAGTGGGAGCCCCTCTAGGGTaGAGAGTCTGGGAGAGAGAGGTGAGGAGGATAAGGGCTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: QLPAPSLLTVGAPLG*RVWEREVRRIRAGR Trigger: TCTACCAGCCCTTATCCTCCTCACCTCTCTCTCCCAGACTCTGCACCCTAGAGGGGCTCCCACTGTCAGCAGGGAAGGAGCTGGTAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS TCA 90 bp | GCAGGGAGGGGCTGGGCACCAGCAGCTCCAGATAGGGAAGGTCCTTaGACTCATCCTCTCCGACAGCCACATAGTAATGGCCAGTTACCA | + |
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Preference number: 5 (lower is better) Translates to: AGRGWAPAAPDREGP*THPLRQPHSNGQLP Trigger: TGGTAACTGGCCATTACTATGTGGCTGTCGGAGAGGATGAGTTCAAGGACCTTCCCTATCTGGAGCTGCTGGTGCCCAGCCCCTCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS TCA 90 bp | CTCGCAGTCCCCATACTCACTTGCACACAGCCCCACTCTGCAACTTaGCCTTCTCAGTCAGGAGCTTCAACACAGTTTCCCAGTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LAVPILTCTQPHSAT*PSQSGASTQFPSPG Trigger: GCCAGGACTGGGAAACTGTGTTGAAGCTCCTGACTGAGAAGGTCAAGTTGCAGAGTGGGGCTGTGTGCAAGTGAGTATGGGGACTGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS GCA 90 bp | TCGTTCAAATCCAGCGGCCACATACTGCCCTCTGTTCTTCAAGTCTaGCAGGTTGGTGACAGGGTGGCCATGACAAGGTGTGTAGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SFKSSGHILPSVLQV*QVGDRVAMTRCVEG Trigger: GCCCTCTACACACCTTGTCATGGCCACCCTGTCACCAACCTGGCAGACTTGAAGAACAGAGGGCAGTATGTGGCCGCTGGATTTGAACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 90 bp | TCAGTCAGGAGCTTCAACACAGTTTCCCAGTCCTGGCTGGCAGCCTaGGACAGCTTCAGACTAAATGGGGGACTTACCAGGTCCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: SVRSFNTVSQSWLAA*DSFRLNGGLTRSPF Trigger: GAATGGGGACCTGGTAAGTCCCCCATTTAGTCTGAAGCTGTCCCAGGCTGCCAGCCAGGACTGGGAAACTGTGTTGAAGCTCCTGACTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 90 bp | GCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATaGCTTAATTCGGTCTGGTTCCTTTGGAGAGGGCTGGGTTACCTG | + |
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Preference number: 5 (lower is better) Translates to: ASWLNGLLGSGIESR*LNSVWFLWRGLGYL Trigger: CAGGTAACCCAGCCCTCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 90 bp | TCATCATCTGCTACTTCCAGGGCCCCCGCTGTCTCCTTCCTTCGGTaGGGAGCTCCATATACTCCTATAACTCCTGATGGGAATGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: SSSATSRAPAVSFLR*GAPYTPITPDGNES Trigger: ACTCTCATTCCCATCAGGAGTTATAGGAGTATATGGAGCTCCCCACCGAAGGAAGGAGACAGCGGGGGCCCTGGAAGTAGCAGATGATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS TCA 72 bp | TCGCAGAGGAAGGCCTCCATGGTGGGGAAGCGGCGTTaGGTCACCACCAGCTGGGAGCCTGGGAAGAATGGG | + |
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Preference number: 6 (lower is better) Translates to: SQRKASMVGKRR*VTTSWEPGKNG Trigger: CCCATTCTTCCCAGGCTCCCAGCTGGTGGTGACTCAACGCCGCTTCCCCACCATGGAGGCCTTCCTCTGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 72 bp | CAGCTGATGTCACCTCGCAGAGGAAGGCCTCCATGGTaGGGAAGCGGCGTTGAGTCACCACCAGCTGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: QLMSPRRGRPPW*GSGVESPPAGS Trigger: GCTCCCAGCTGGTGGTGACTCAACGCCGCTTCCCCACCATGGAGGCCTTCCTCTGCGAGGTGACATCAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 72 bp | GCACAGCTGATGTCACCTCGCAGAGGAAGGCCTCCATaGTGGGGAAGCGGCGTTGAGTCACCACCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AQLMSPRRGRPP*WGSGVESPPAG Trigger: CCCAGCTGGTGGTGACTCAACGCCGCTTCCCCACCATGGAGGCCTTCCTCTGCGAGGTGACATCAGCTGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 72 bp | CCCTGCTCCCTCACACTGGCACTCACTGGATATAGCTaGGAGCACCTGCAGGCAGCTGCCGTCCAATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PCSLTLALTGYS*EHLQAAAVQWP Trigger: GGGCCATTGGACGGCAGCTGCCTGCAGGTGCTCCCAGCTATATCCAGTGAGTGCCAGTGTGAGGGAGCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS CAA 72 bp | CTCGCAGAGGAAGGCCTCCATGGTGGGGAAGCGGCGTaGAGTCACCACCAGCTGGGAGCCTGGGAAGAATGG | + |
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Preference number: 6 (lower is better) Translates to: LAEEGLHGGEAA*SHHQLGAWEEW Trigger: CCATTCTTCCCAGGCTCCCAGCTGGTGGTGACTCAACGCCGCTTCCCCACCATGGAGGCCTTCCTCTGCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 72 bp | GCAGGCAGCTGCCGTCCAATGGCCCCATCACACAAGTaGCGAGTCACGGGAGGACCTTGTAGTCTGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: AGSCRPMAPSHK*RVTGGPCSLQL Trigger: GAGCTGCAGACTACAAGGTCCTCCCGTGACTCGCCACTTGTGTGATGGGGCCATTGGACGGCAGCTGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 72 bp | GATGGCTTAATTCGGTCTGGTTCCTTTGGAGAGGGCTaGGTTACCTGGGCCCTGTGGCCTTGGGCCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: DGLIRSGSFGEG*VTWALWPWAPC Trigger: GCAGGGGGCCCAAGGCCACAGGGCCCAGGTAACCCAGCCCTCTCCAAAGGAACCAGACCGAATTAAGCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS GCA 72 bp | TCACACTGGCACTCACTGGATATAGCTGGGAGCACCTaGAGGCAGCTGCCGTCCAATGGCCCCATCACACAA | + |
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Preference number: 6 (lower is better) Translates to: SHWHSLDIAGST*RQLPSNGPITQ Trigger: TTGTGTGATGGGGCCATTGGACGGCAGCTGCCTGCAGGTGCTCCCAGCTATATCCAGTGAGTGCCAGTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS TCA 72 bp | GGCTGGGCACCAGCAGCTCCAGATAGGGAAGGTCCTTaGACTCATCCTCTCCGACAGCCACATAGTAATGGC | + |
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Preference number: 6 (lower is better) Translates to: GWAPAAPDREGP*THPLRQPHSNG Trigger: GCCATTACTATGTGGCTGTCGGAGAGGATGAGTTCAAGGACCTTCCCTATCTGGAGCTGCTGGTGCCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS GCA 72 bp | TCCAGCGGCCACATACTGCCCTCTGTTCTTCAAGTCTaGCAGGTTGGTGACAGGGTGGCCATGACAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SSGHILPSVLQV*QVGDRVAMTRC Trigger: ACACCTTGTCATGGCCACCCTGTCACCAACCTGGCAGACTTGAAGAACAGAGGGCAGTATGTGGCCGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CAA 90 bp | AGCCCCTCTAGGGTGCAGAGTTTGCACACAGCCCCACTCTGCAACTaGACCTTCTCAGTCAGGAGCTTCAACACAGTTTCCCAGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPSRVQSLHTAPLCN*TFSVRSFNTVSQSW Trigger: CCAGGACTGGGAAACTGTGTTGAAGCTCCTGACTGAGAAGGTCAAGTTGCAGAGTGGGGCTGTGTGCAAACTCTGCACCCTAGAGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409358.2 |
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| CDS CAA 90 bp | CCTCGCAGTCCCCATACTCACTTGCACACAGCCCCACTCTGCAACTaGACCTTCTCAGTCAGGAGCTTCAACACAGTTTCCCAGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PRSPHTHLHTAPLCN*TFSVRSFNTVSQSW Trigger: CCAGGACTGGGAAACTGTGTTGAAGCTCCTGACTGAGAAGGTCAAGTTGCAGAGTGGGGCTGTGTGCAAGTGAGTATGGGGACTGCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS TCA 72 bp | GGGTGCAGAGTTTGCACACAGCCCCACTCTGCAACTTaGCCTTCTCAGTCAGGAGCTTCAACACAGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: GCRVCTQPHSAT*PSQSGASTQFP Trigger: GGGAAACTGTGTTGAAGCTCCTGACTGAGAAGGTCAAGTTGCAGAGTGGGGCTGTGTGCAAACTCTGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409358.2 |
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| CDS TCA 72 bp | GCTGGTAGACTCGATGCTTCTTCACATTCAGCAGACTaGAGGGGTGGGTGCAGCTATTCCAAGGTGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: AGRLDASSHSAD*RGGCSYSKVPS Trigger: AGAGGGCACCTTGGAATAGCTGCACCCACCCCTTCAGTCTGCTGAATGTGAAGAAGCATCGAGTCTACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS CCA 72 bp | ATAGAAAGCAGATGGCTTAATTCGGTCTGGTTCCTTTaGAGAGGGCTGGGTTACCTGGGCCCTGTGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: IESRWLNSVWFL*RGLGYLGPVAL Trigger: CAAGGCCACAGGGCCCAGGTAACCCAGCCCTCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CCA 72 bp | GGAATGAGAGTGTGGGGAGCTTGCTTCTTGGCTGAATaGTCTGCTGGGGTCTGGCATAGAAAGCAGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: GMRVWGACFLAE*SAGVWHRKQMA Trigger: AGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAGCCAAGAAGCAAGCTCCCCACACTCTCATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS TCA 72 bp | CCCATACTCACTTGCACACAGCCCCACTCTGCAACTTaGCCTTCTCAGTCAGGAGCTTCAACACAGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PILTCTQPHSAT*PSQSGASTQFP Trigger: GGGAAACTGTGTTGAAGCTCCTGACTGAGAAGGTCAAGTTGCAGAGTGGGGCTGTGTGCAAGTGAGTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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| CDS CCA 72 bp | CTGAATGGTCTGCTGGGGTCTGGCATAGAAAGCAGATaGCTTAATTCGGTCTGGTTCCTTTGGAGAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LNGLLGSGIESR*LNSVWFLWRGL Trigger: CAGCCCTCTCCAAAGGAACCAGACCGAATTAAGCCATCTGCTTTCTATGCCAGACCCCAGCAGACCATTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409358.2 ENST00000487056.1 |
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| CDS CAA 72 bp | AGGGTGCAGAGTTTGCACACAGCCCCACTCTGCAACTaGACCTTCTCAGTCAGGAGCTTCAACACAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RVQSLHTAPLCN*TFSVRSFNTVS Trigger: GGAAACTGTGTTGAAGCTCCTGACTGAGAAGGTCAAGTTGCAGAGTGGGGCTGTGTGCAAACTCTGCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409358.2 |
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| CDS CAA 72 bp | CCCCATACTCACTTGCACACAGCCCCACTCTGCAACTaGACCTTCTCAGTCAGGAGCTTCAACACAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PHTHLHTAPLCN*TFSVRSFNTVS Trigger: GGAAACTGTGTTGAAGCTCCTGACTGAGAAGGTCAAGTTGCAGAGTGGGGCTGTGTGCAAGTGAGTATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487056.1 |
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