RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000170959

Ensembl transcript IDs: ENST00000303697.8, ENST00000342355.8, ENST00000406071.6, ENST00000429306.2, ENST00000437348.5, ENST00000444572.6, ENST00000452803.1, ENST00000483396.5, ENST00000534722.5, ENST00000597505.5, ENST00000684477.1

Found 706 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGTTAATTGTGGAGATGTGCCAGAGACAGCAGCTTCGTGGATGGTaGCACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGAT +
Preference number: 1 (lower is better)
Translates to: ELIVEMCQRQQLRGW*HHNVCGLRALLPSD
Trigger: ATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCATCCACGAAGCTGCTGTCTCTGGCACATCTCCACAATTAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR GCA 90 bp TATGTCGTCCCAGGACTGAATTGGCTCTCCACTGGGGGTGTACAGTaGTCTAGCTGGGTGGGTCATTTTGAGACGAGAGGAGCAGTCTTG +
Preference number: 1 (lower is better)
Translates to: YVVPGLNWLSTGGVQ*SSWVGHFETRGAVL
Trigger: CAAGACTGCTCCTCTCGTCTCAAAATGACCCACCCAGCTAGAGCACTGTACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGACGACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR CCA 90 bp CACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACTGAATTaGCTCTCCACTGGGGGTGTACAGTGCTCTAGCTGGGTGGGTCAT +
Preference number: 1 (lower is better)
Translates to: HTDDHISLYVVPGLN*LSTGGVQCSSWVGH
Trigger: ATGACCCACCCAGCTAGAGCACTGTACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR TCA 90 bp ATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACTaGATTGGCTCTCCACTGGGGGTGTACAGTGCTCTAGCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: IDTQMTISRSMSSQD*IGSPLGVYSALAGW
Trigger: CCACCCAGCTAGAGCACTGTACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR GCA 90 bp CAGCCCACTTTTCCTCTCGGTAACTGTGACCCAGGGACTCAGCACTaGCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAG +
Preference number: 1 (lower is better)
Translates to: QPTFPLGNCDPGTQH*PASISLALLLLSLQ
Trigger: CTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGGGTCACAGTTACCGAGAGGAAAAGTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR GCA 90 bp CAAGGCAGAATGGCAGGGGTCAGGGCTGGGCATGTGATGACACCTTaGATCTGGCAAATGCATCAGGAATATGAGCCAAGACAAGAAGAG +
Preference number: 1 (lower is better)
Translates to: QGRMAGVRAGHVMTP*IWQMHQEYEPRQEE
Trigger: CTCTTCTTGTCTTGGCTCATATTCCTGATGCATTTGCCAGATGCAAGGTGTCATCACATGCCCAGCCCTGACCCCTGCCATTCTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR CCA 90 bp TGGTCTCAGGGCCACCCAGGTTTGAATCCCATCACTACCACTTCCTaGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTA +
Preference number: 1 (lower is better)
Translates to: WSQGHPGLNPITTTS*QWKFWVSDLTSQRL
Trigger: TAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGAAGTGGTAGTGATGGGATTCAAACCTGGGTGGCCCTGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR CCA 90 bp ACCTGTAGTAAGAGAAGTATAGTGAAGTGGGTAGAGCGGAAGCTCTaGTCTCAGGGCCACCCAGGTTTGAATCCCATCACTACCACTTCC +
Preference number: 1 (lower is better)
Translates to: TCSKRSIVKWVERKL*SQGHPGLNPITTTS
Trigger: GGAAGTGGTAGTGATGGGATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCACTTCACTATACTTCTCTTACTACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR CCA 90 bp GCAGAACCTCTTCTGCTAAGTTTCTGCCATGTTCCTGATGAGCTGTaGTCCAGGCACCATGGTGAATGTGATACTCTGTCTGGGTCACAT +
Preference number: 1 (lower is better)
Translates to: AEPLLLSFCHVPDEL*SRHHGECDTLSGSH
Trigger: ATGTGACCCAGACAGAGTATCACATTCACCATGGTGCCTGGACCACAGCTCATCAGGAACATGGCAGAAACTTAGCAGAAGAGGTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR GCA 90 bp AGAGAACCTTCTGGCATTAAATGGGTGTCTGAGGGTTCTGGCAGTTaGTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCT +
Preference number: 1 (lower is better)
Translates to: REPSGIKWVSEGSGS*FRPRLLALSCRTSS
Trigger: AGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAGAACCCTCAGACACCCATTTAATGCCAGAAGGTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR CCA 90 bp CAGGGCCACCCAGGTTTGAATCCCATCACTACCACTTCCTGGCAGTaGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTATTTCAT +
Preference number: 1 (lower is better)
Translates to: QGHPGLNPITTTSWQ*KFWVSDLTSQRLFH
Trigger: ATGAAATAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGAAGTGGTAGTGATGGGATTCAAACCTGGGTGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR TCA 90 bp TGGGCATGTGATGACACCTTGCATCTGGCAAATGCATCAGGAATATaGGCCAAGACAAGAAGAGTGATGGGGCGATGCAGTTCAAAAAGC +
Preference number: 1 (lower is better)
Translates to: WACDDTLHLANASGI*AKTRRVMGRCSSKS
Trigger: GCTTTTTGAACTGCATCGCCCCATCACTCTTCTTGTCTTGGCTCATATTCCTGATGCATTTGCCAGATGCAAGGTGTCATCACATGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR TCA 90 bp TCTGCATACAAACCAATCCTTCAACCTACCATTGAGGGAGGATTCTaGCAGCTCCCAAGTAGATGTCTAGGGTCACCAAAGAGAACTAAC +
Preference number: 1 (lower is better)
Translates to: SAYKPILQPTIEGGF*QLPSRCLGSPKRTN
Trigger: GTTAGTTCTCTTTGGTGACCCTAGACATCTACTTGGGAGCTGTCAGAATCCTCCCTCAATGGTAGGTTGAAGGATTGGTTTGTATGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR TCA 90 bp AAATGTGATAATAGCACACTTCTGGGATACGTGAAGCACGAGTCATaGATCCGAATGCCTCTGGCATCCATGAAGTATCACGTCTCAGAG +
Preference number: 1 (lower is better)
Translates to: KCDNSTLLGYVKHES*IRMPLASMKYHVSE
Trigger: CTCTGAGACGTGATACTTCATGGATGCCAGAGGCATTCGGATTCATGACTCGTGCTTCACGTATCCCAGAAGTGTGCTATTATCACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452803.1
3UTR GCA 90 bp CTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTaGTTCAGGAAAGCAGAGATAAAAGGGCTGTGTACCTGTAGTAAG +
Preference number: 1 (lower is better)
Translates to: LLLLSLQYNPSTYKG*FRKAEIKGLCTCSK
Trigger: CTTACTACAGGTACACAGCCCTTTTATCTCTGCTTTCCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR CCA 90 bp TTCAAATACCTTAAGCTGCAGGCCTCCTGGGACAAGCGTGTTTGCTaGAAGGCTTTTAATGTGTTGGTAGACATAAGAGGAGAATTGCTC +
Preference number: 1 (lower is better)
Translates to: FKYLKLQASWDKRVC*KAFNVLVDIRGELL
Trigger: GAGCAATTCTCCTCTTATGTCTACCAACACATTAAAAGCCTTCCAGCAAACACGCTTGTCCCAGGAGGCCTGCAGCTTAAGGTATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR GCA 90 bp ATTTTCAAATACCTTAAGCTGCAGGCCTCCTGGGACAAGCGTGTTTaGTGGAAGGCTTTTAATGTGTTGGTAGACATAAGAGGAGAATTG +
Preference number: 1 (lower is better)
Translates to: IFKYLKLQASWDKRV*WKAFNVLVDIRGEL
Trigger: CAATTCTCCTCTTATGTCTACCAACACATTAAAAGCCTTCCAGCAAACACGCTTGTCCCAGGAGGCCTGCAGCTTAAGGTATTTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR GCA 90 bp ATACACACAGAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTaGTCAGATACAGGAGAGATGCTGAGGCTGCTGATAACAGTAATA +
Preference number: 1 (lower is better)
Translates to: IHTETRQPQLKGKEY*SDTGEMLRLLITVI
Trigger: TATTACTGTTATCAGCAGCCTCAGCATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTCTGTGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR CCA 90 bp CGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTaGTTGTCCAAGGCTCCTTCAATGTTGAGATTTTCTTCAGCTTCT +
Preference number: 1 (lower is better)
Translates to: RRVDTVQLFNEYRIR*LSKAPSMLRFSSAS
Trigger: AGAAGCTGAAGAAAATCTCAACATTGAAGGAGCCTTGGACAACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR TCA 90 bp AAGTGGATTCTTAATTTCTTGGCCATTCTCATCAAAAAGCCGCATTaGAGAATAATTGAGGCCTGGTGGGTTGATGGAAGAACCTTGAAG +
Preference number: 1 (lower is better)
Translates to: KWILNFLAILIKKPH*RIIEAWWVDGRTLK
Trigger: CTTCAAGGTTCTTCCATCAACCCACCAGGCCTCAATTATTCTTCAATGCGGCTTTTTGATGAGAATGGCCAAGAAATTAAGAATCCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGGGCAGGGGTCAGGGCTaGGCATGTGATGACACCTTG +
Preference number: 2 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWGRGQG*ACDDTL
Trigger: CAAGGTGTCATCACATGCCCAGCCCTGACCCCTGCC...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR CAA 90 bp GGCTCTCCACTGGGGGTGTACAGTGCTCTAGCTGGGTGGGTCATTTaGAGACGAGAGGAGCAGTCTTGCAGCAGCTGCCTGTATGGCTTT +
Preference number: 2 (lower is better)
Translates to: GSPLGVYSALAGWVI*RREEQSCSSCLYGF
Trigger: AAAGCCATACAGGCAGCTGCTGCAAGACTGCTCCTCTCGTCTCAAAATGACCCACCCAGCTAGAGCACTGTACACCCCCAGTGGAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR CCA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATCACAACAAGGCAGAATaGCAGGGGTCAGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNHNKAE*QGSGLG
Trigger: GCCCAGCCCTGACCCCTGCCATTCTGCCTTGTTGTG...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR TCA 90 bp CTGGCAGTTGCTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCTGATAGCCAGGCAGCCCTaGGTTATCGCTCGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: LAVASDQGCWHFLAEPLLIARQP*VIARLR
Trigger: CCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCTAT...CAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR GCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTGAGGAGAATTGCTCCTaGTCAGCCTGTAATTGGGGG +
Preference number: 2 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPAEENCS*SACNWG
Trigger: CCCCCAATTACAGGCTGAGCAGGAGCAATTCTCCTC...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR TCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTGTCCTCGCAAAGGTGTaGTGGAATTTTGCAGGCATT +
Preference number: 2 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPAVLAKV*WNFAGI
Trigger: AATGCCTGCAAAATTCCATCACACCTTTGCGAGGAC...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR GCA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACCCCCCAAAATGCAGGTaGCAAGTCCACATCAGCCCT +
Preference number: 2 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDPPKCR*QVHISP
Trigger: AGGGCTGATGTGGACTTGGCACCTGCATTTTGGGGG...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR GCA 90 bp CCCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGATGTGGAAGACCAGTTaGCATGGGTATTACGCCGGG +
Preference number: 2 (lower is better)
Translates to: PRDSALPSFHFISSIAAEMWKTS*HGYYAG
Trigger: CCCGGCGTAATACCCATGGCAACTGGTCTTCCACAT...CTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR CCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTGTTCCTGATGAGCTGTaGTCCAGGCACCATGGTGAA +
Preference number: 2 (lower is better)
Translates to: SFLTSATVSSPVSSREPSVPDEL*SRHHGE
Trigger: TTCACCATGGTGCCTGGACCACAGCTCATCAGGAAC...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR TCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAATCGATGGCGCTATTTaGCTCCTGCTGCTTGCTTCA +
Preference number: 2 (lower is better)
Translates to: SSSFLTSATVSSPVSSREIDGAI*LLLLAS
Trigger: TGAAGCAAGCAGCAGGAGTCAAATAGCGCCATCGAT...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR GCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTCACAAACTTCCCAATTaGCACATCCAGGTAGCAGAA +
Preference number: 2 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPAHKLPN*HIQVAE
Trigger: TTCTGCTACCTGGATGTGGCAATTGGGAAGTTTGTG...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR GCA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATTGCTGCTTGCTTCACTaGCTGAGAAACTCCACTTTC +
Preference number: 2 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDCCLLH*LRNSTF
Trigger: GAAAGTGGAGTTTCTCAGGCAGTGAAGCAAGCAGCA...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATCAGCAGCTGCCTGTATaGCTTTCACCTATTAGAGGG +
Preference number: 2 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNQQLPV*LSPIRG
Trigger: CCCTCTAATAGGTGAAAGCCATACAGGCAGCTGCTG...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR TCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGCCTTCAACCTACCATTaGGGGAGGATTCTGACAGCT +
Preference number: 2 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGPSTYH*GRILTA
Trigger: AGCTGTCAGAATCCTCCCTCAATGGTAGGTTGAAGG...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR GCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGTCATCTGTCCCACTGTaGAAATGGAGTCACACGCTC +
Preference number: 2 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGSSVPL*KWSHTL
Trigger: GAGCGTGTGACTCCATTTGCACAGTGGGACAGATGA...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR-3UTR GCA 90 bp CTGGCAGTTGCTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCTGTCAAATACCTTAAGCTaGAGGCCTCCTGGGACAAGC +
Preference number: 2 (lower is better)
Translates to: LAVASDQGCWHFLAEPLLSNTLS*RPPGTS
Trigger: GCTTGTCCCAGGAGGCCTGCAGCTTAAGGTATTTGA...CAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp AGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACGTAGAGCGGAAGCTCTaGTCTCAGGGCCACCCAGGT +
Preference number: 2 (lower is better)
Translates to: SFHFISSIAAEPSVQSFHVERKL*SQGHPG
Trigger: ACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTAC...GTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR TCA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGTTTCACCCAGTATTTTaGGTAAGGGATGAGTGGATT +
Preference number: 2 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWFHPVF*VRDEWI
Trigger: AATCCACTCATCCCTTACTCAAAATACTGGGTGAAA...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR TCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTCCTTCTGTTCATTCATaGCCAGGTTCAACTGTAGTC +
Preference number: 2 (lower is better)
Translates to: SFLTSATVSSPVSSREPSPSVHS*PGSTVV
Trigger: GACTACAGTTGAACCTGGTCATGAATGAACAGAAGG...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR TCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTTGGTCAGGTATCTGTTaGCTGGTACAGTTGAAATTA +
Preference number: 2 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPAWSGIC*LVQLKL
Trigger: TAATTTCAACTGTACCAGTCAACAGATACCTGACCA...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR TCA 90 bp GGGCTGTGTACCTGTAGTAAGAGAAGTATAGTGAAGTGGGTAGAGCGGAAGCTCATCCCTTCAATTCTGTaGGCCCCCTCTTTCGCTTCA +
Preference number: 2 (lower is better)
Translates to: GLCTCSKRSIVKWVERKLIPSIL*APSFAS
Trigger: TGAAGCGAAAGAGGGGGCTCACAGAATTGAAGGGAT...GAGCTTCCGCTCTACCCACTTCACTATACTTCTCTTACTACAGGTACACAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR GCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTCTTTTGATAGCTGTCTaGAATTCATCAATCAGCCTG +
Preference number: 2 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPALLIAV*NSSISL
Trigger: CAGGCTGATTGATGAATTGCAGACAGCTATCAAAAG...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR GCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAATGGGACAAGCGTGTTTaGTGGAAGGCTTTTAATGTG +
Preference number: 2 (lower is better)
Translates to: SSSFLTSATVSSPVSSREWDKRV*WKAFNV
Trigger: CACATTAAAAGCCTTCCAGCAAACACGCTTGTCCCA...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR GCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTTTGCTGGCACTTTCTTaGAGAACCTCTTCTGCTAAG +
Preference number: 2 (lower is better)
Translates to: SFLTSATVSSPVSSREPSLLALS*RTSSAK
Trigger: CTTAGCAGAAGAGGTTCTGCAAGAAAGTGCCAGCAA...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACGTCCCAGGACTGAATTaGCTCTCCACTGGGGGTGTA +
Preference number: 2 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDVPGLN*LSTGGV
Trigger: TACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGAC...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR CCA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATATGGTCAGTTTGAATTaGGCTATCCGATCCCAAATC +
Preference number: 2 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDMVSLN*AIRSQI
Trigger: GATTTGGGATCGGATAGCCCAATTCAAACTGACCAT...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR TCA 90 bp GATTCGAGGGAGGCAGATGAGGAGCTTCGTAGCAGGCAGCCTGGGATGAAATCTAGGCTCCTTCAATGTTaGGATTTTCTTCAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: DSREADEELRSRQPGMKSRLLQC*DFLQLL
Trigger: AAGAAGCTGAAGAAAATCTCAACATTGAAGGAGCCT...AGATTTCATCCCAGGCTGCCTGCTACGAAGCTCCTCATCTGCCTCCCTCGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR GCA 90 bp GAAACCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAATGCAGCCCTACTCCTaGCAAATACCATCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: ETMSHRHTDDHISLYVVPMQPYS*QIPSSQ
Trigger: CTGACTGGATGGTATTTGGCAGGAGTAGGGCTGCAT...TGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR CCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAGCAGACTTTAATCGTTaGTACAGGGCCAAAAGAACT +
Preference number: 2 (lower is better)
Translates to: SSSFLTSATVSSPVSSREADFNR*YRAKRT
Trigger: AGTTCTTTTGGCCCTGTACCAACGATTAAAGTCTGC...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR CAA 90 bp ATTAAATGGGTGTCTGAGGGTTCTGGCAGTTGCTTCAGACCAAGGTaGCTGGCACTTTCTTGCAGAACCTCTTCTGCTAAGTTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: IKWVSEGSGSCFRPR*LALSCRTSSAKFLP
Trigger: TGGCAGAAACTTAGCAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAGAACCCTCAGACACCCATTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR TCA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACAATGCATCAGGAATATaGGCCAAGACAAGAAGAGTG +
Preference number: 2 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDNASGI*AKTRRV
Trigger: CACTCTTCTTGTCTTGGCTCATATTCCTGATGCATT...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR GCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGCTTGCATCTGGCAAATaGATCAGGAATATGAGCCAA +
Preference number: 2 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGLASGK*IRNMSQ
Trigger: TTGGCTCATATTCCTGATGCATTTGCCAGATGCAAG...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR GCA 90 bp GATTCGAGGGAGGCAGATGAGGAGCTTCGTAGCAGGCAGCCTGGGATGAAATCTATGATAGATTTCTGTTaGTTGCAACCAAGAACTCAG +
Preference number: 2 (lower is better)
Translates to: DSREADEELRSRQPGMKSMIDFC*LQPRTQ
Trigger: CTGAGTTCTTGGTTGCAAGCAACAGAAATCTATCAT...AGATTTCATCCCAGGCTGCCTGCTACGAAGCTCCTCATCTGCCTCCCTCGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR CCA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGAAACCTATACATTATTaGTGTTACTGGAGAGGAATC +
Preference number: 2 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWKPIHY*CYWRGI
Trigger: GATTCCTCTCCAGTAACACCAATAATGTATAGGTTT...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR CCA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGCCTTCTGGCATTAAATaGGTGTCTGAGGGTTCTGGC +
Preference number: 2 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERPSGIK*VSEGSG
Trigger: GCCAGAACCCTCAGACACCCATTTAATGCCAGAAGG...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp TCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTAACCACTTCCTGGCAGTaGAAATTTTGGGTGAGTGAC +
Preference number: 2 (lower is better)
Translates to: SALPSFHFISSIAAEPSVTTSWQ*KFWVSD
Trigger: GTCACTCACCCAAAATTTCCACTGCCAGGAAGTGGT...TACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR CCA 90 bp GGGCTGTGTACCTGTAGTAAGAGAAGTATAGTGAAGTGGGTAGAGCGGAAGCTCATCACTACCACTTCCTaGCAGTGGAAATTTTGGGTG +
Preference number: 2 (lower is better)
Translates to: GLCTCSKRSIVKWVERKLITTTS*QWKFWV
Trigger: CACCCAAAATTTCCACTGCCAGGAAGTGGTAGTGAT...GAGCTTCCGCTCTACCCACTTCACTATACTTCTCTTACTACAGGTACACAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR GCA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACAAAGGAAAGGAGTATTaGTCAGATACAGGAGAGATG +
Preference number: 2 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDKGKEY*SDTGEM
Trigger: CATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTT...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR GCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCCAGGAGATTGAGGCTTaGCTGGGCAACATAGTGAGA +
Preference number: 2 (lower is better)
Translates to: KGLICNHDITSGKCTHSVQEIEA*LGNIVR
Trigger: TCTCACTATGTTGCCCAGGCAAGCCTCAATCTCCTG...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTAGCGATGGAAATAATTaGCCTTCTTGTCACAGTCTT +
Preference number: 2 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGSDGNN*PSCHSL
Trigger: AAGACTGTGACAAGAAGGCCAATTATTTCCATCGCT...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR-3UTR CCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAATTGTTCTGTAGAAAATaGTTCTCCAAGTCCACCTTT +
Preference number: 2 (lower is better)
Translates to: SSSFLTSATVSSPVSSRELFCRK*FSKSTF
Trigger: AAAGGTGGACTTGGAGAACCATTTTCTACAGAACAA...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTCACTTATCATTTAGTTaGGGAGACAAAACATGCAGT +
Preference number: 2 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGHLSFS*GDKTCS
Trigger: ACTGCATGTTTTGTCTCCCCAACTAAATGATAAGTG...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR-3UTR CCA 90 bp GCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGAAAGCAGAGAATATAGGATTAGGTaGTTGTCCAAGGCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: AEPSVQSFHLQRLLQESREYRIR*LSKAPS
Trigger: TGAAGGAGCCTTGGACAACCACCTAATCCTATATTC...TCTGCTTTCCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR TCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGCAGCTTCGTGGATGGTaGCACCACAATGTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQQLRGW*HHNVCG
Trigger: GCCACAGACATTGTGGTGTCACCATCCACGAAGCTG...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR TCA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTGTACATCTTAGCTCCTaGGGGGCTGAAACCTTCTCC +
Preference number: 2 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFVHLSS*GAETFS
Trigger: GGAGAAGGTTTCAGCCCCTCAGGAGCTAAGATGTAC...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR TCA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGATCAAAAAGCCGCATTaGAGAATAATTGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERIKKPH*RIIEAW
Trigger: CCAGGCCTCAATTATTCTTCAATGCGGCTTTTTGAT...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR TCA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGATGGAAACAGAGGCATaGAGGACAATATTGGGATCT +
Preference number: 2 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERMETEA*RTILGS
Trigger: AGATCCCAATATTGTCCTTCATGCCTCTGTTTCCAT...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR GCA 90 bp CTGGCAGTTGCTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCTGCAAAAAGGTCTTATATaGAACCATGATATCACCTCT +
Preference number: 2 (lower is better)
Translates to: LAVASDQGCWHFLAEPLLQKGLI*NHDITS
Trigger: AGAGGTGATATCATGGTTGCATATAAGACCTTTTTG...CAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp GAAACCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAATGACACCTTGCATCTaGCAAATGCATCAGGAATAT +
Preference number: 2 (lower is better)
Translates to: ETMSHRHTDDHISLYVVPMTPCI*QMHQEY
Trigger: ATATTCCTGATGCATTTGCCAGATGCAAGGTGTCAT...TGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR CCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTATACAGATTTCACTaGCATACAAAATGTCTATGG +
Preference number: 2 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGVYRFH*HTKCLW
Trigger: CCATAGACATTTTGTATGCCAGTGAAATCTGTATAC...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR-3UTR CCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCATAATTGAGGCCTGGTaGGTTGATGGAAGAACCTTG +
Preference number: 2 (lower is better)
Translates to: KGLICNHDITSGKCTHSVIIEAW*VDGRTL
Trigger: CAAGGTTCTTCCATCAACCCACCAGGCCTCAATTAT...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCAGAATAATTGAGGCCTaGTGGGTTGATGGAAGAACC +
Preference number: 2 (lower is better)
Translates to: KGLICNHDITSGKCTHSVRIIEA*WVDGRT
Trigger: GGTTCTTCCATCAACCCACCAGGCCTCAATTATTCT...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGATGTCCCCATCATGTTaGTGTGGGGTGGGACTGATG +
Preference number: 2 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQMSPSC*CGVGLM
Trigger: CATCAGTCCCACCCCACAGCAACATGATGGGGACAT...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR-3UTR CCA 90 bp CAGATACACACAGAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCATTAGGGCAGACTAGGTaGAGAAGATCTCACAGGATA +
Preference number: 2 (lower is better)
Translates to: QIHTETRQPQLKGKEYCSLGQTR*RRSHRI
Trigger: TATCCTGTGAGATCTTCTCCACCTAGTCTGCCCTAA...TGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTCTGTGTGTATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR TCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTTCATTCCAGTCTTGGTaGTCAGCCACACACTGGCTA +
Preference number: 2 (lower is better)
Translates to: KSVLKAAVTTERYIVFSISFQSW*SATHWL
Trigger: TAGCCAGTGTGTGGCTGATCACCAAGACTGGAATGA...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGAGAGTGATGGGGCGATaGAGTTCAAAAAGCGCAGCT +
Preference number: 2 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQRVMGR*SSKSAA
Trigger: AGCTGCGCTTTTTGAACTGCATCGCCCCATCACTCT...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTCATCTGTCCCACTGTaGAAATGGAGTCACACGCTC +
Preference number: 2 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQSSVPL*KWSHTL
Trigger: GAGCGTGTGACTCCATTTGCACAGTGGGACAGATGA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR-3UTR CCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGTCCCACTGTGCAAATaGAGTCACACGCTCACTCAA +
Preference number: 2 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQVPLCK*SHTLTQ
Trigger: TTGAGTGAGCGTGTGACTCCATTTGCACAGTGGGAC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR CAA 90 bp CAGCTGACTGAAAGGAAATTCTATAAAGCAGATCCTCTATTCCCATaGTACTGTTGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAA +
Preference number: 2 (lower is better)
Translates to: QLTERKFYKADPLFP*YCCNFGLRLRPRVE
Trigger: TTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACAACAGTACAATGGGAATAGAGGATCTGCTTTATAGAATTTCCTTTCAGTCAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR-3UTR TCA 90 bp GATAACTTTCACATAAAACTTGACCTTTCCCAAGTTGAAGTTCAGAAAACCATCCACTTCTGGGATACGTaGAGCACGAGTCATGAATCC +
Preference number: 2 (lower is better)
Translates to: DNFHIKLDLSQVEVQKTIHFWDT*STSHES
Trigger: GGATTCATGACTCGTGCTTCACGTATCCCAGAAGTG...GATGGTTTTCTGAACTTCAACTTGGGAAAGGTCAAGTTTTATGTGAAAGTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452803.1
3UTR-3UTR GCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTGTCTATCTCCTTCCTTaGTCTGTCTGCATTGCCTCA +
Preference number: 2 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIVYLLP*SVCIAS
Trigger: TGAGGCAATGCAGACAGAGCAAGGAAGGAGATAGAC...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR CAA 90 bp CGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTaGTCCAAGGCTCCTTCAATGTTGAGATTTTCTTCAGCTTCTTGT +
Preference number: 2 (lower is better)
Translates to: RVDTVQLFNEYRIRW*SKAPSMLRFSSASC
Trigger: ACAAGAAGCTGAAGAAAATCTCAACATTGAAGGAGCCTTGGACAACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR TCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTATCATATGGTCAGTTTaGATTGGGCTATCCGATCCC +
Preference number: 2 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIIIWSV*IGLSDP
Trigger: GGGATCGGATAGCCCAATTCAAACTGACCATATGAT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTGCCAAAAGAACTCCTTaGATGTACATCTTAGCTCCT +
Preference number: 2 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFAKRTP*MYILAP
Trigger: AGGAGCTAAGATGTACATCCAAGGAGTTCTTTTGGC...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR GCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTATTCATCAATCAGCCTaGTCACTTCTTCCTGTTCCT +
Preference number: 2 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIIHQSA*SLLPVP
Trigger: AGGAACAGGAAGAAGTGAGCAGGCTGATTGATGAAT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTTCTTCCTGTTCCTTATaGTGTTCCTTTGCCGTCATT +
Preference number: 2 (lower is better)
Translates to: KSVLKAAVTTERYIVFSISSCSL*CSFAVI
Trigger: AATGACGGCAAAGGAACACCATAAGGAACAGGAAGA...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTGACAAGCGTGTTTGCTaGAAGGCTTTTAATGTGTTG +
Preference number: 2 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIDKRVC*KAFNVL
Trigger: CAACACATTAAAAGCCTTCCAGCAAACACGCTTGTC...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR TCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGCTGATTAAAACATATTaGCACATTTCTAGGGACTGG +
Preference number: 2 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQLIKTY*HISRDW
Trigger: CCAGTCCCTAGAAATGTGTCAATATGTTTTAATCAG...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR TCA 72 bp GTGGAGATGTGCCAGAGACAGCAGCTTCGTGGATGGTaGCACCACAATGTCTGTGGCTTGAGGGCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: VEMCQRQQLRGW*HHNVCGLRALL
Trigger: CAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCATCCACGAAGCTGCTGTCTCTGGCACATCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR CCA 72 bp GATCAGCCACACACTGGCTACAGGCCACAGGATCGATaGCGCTATTTGACTCCTGCTGCTTGCTTCACTGCC +
Preference number: 3 (lower is better)
Translates to: DQPHTGYRPQDR*RYLTPAACFTA
Trigger: GGCAGTGAAGCAAGCAGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATCTTGAGCACAGGAGATaGAGGCTTGCCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDLEHRR*RLAWAT
Trigger: TGTTGCCCAGGCAAGCCTCAATCTCCTGTGCTCAAG...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR TCA 72 bp AGGCAGATGAGGAGCTTCGTAGCAGGCAGCCTGGGATaGAATCTCAGCCAGCCCACTTTTCCTCTCGGTAAC +
Preference number: 3 (lower is better)
Translates to: RQMRSFVAGSLG*NLSQPTFPLGN
Trigger: GTTACCGAGAGGAAAAGTGGGCTGGCTGAGATTTCATCCCAGGCTGCCTGCTACGAAGCTCCTCATCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR GCA 72 bp CCAGGACTGAATTGGCTCTCCACTGGGGGTGTACAGTaGTCTAGCTGGGTGGGTCATTTTGAGACGAGAGGA +
Preference number: 3 (lower is better)
Translates to: PGLNWLSTGGVQ*SSWVGHFETRG
Trigger: TCCTCTCGTCTCAAAATGACCCACCCAGCTAGAGCACTGTACACCCCCAGTGGAGAGCCAATTCAGTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR CCA 72 bp GACCATATCTCGCTCTATGTCGTCCCAGGACTGAATTaGCTCTCCACTGGGGGTGTACAGTGCTCTAGCTGG +
Preference number: 3 (lower is better)
Translates to: DHISLYVVPGLN*LSTGGVQCSSW
Trigger: CCAGCTAGAGCACTGTACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGACGACATAGAGCGAGATATGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR CAA 90 bp CCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCAGGGCCACCCAGGTTaGAATCCCATCACTACCACT +
Preference number: 3 (lower is better)
Translates to: PGTQHCPASISLALLLLSQGHPG*NPITTT
Trigger: AGTGGTAGTGATGGGATTCAAACCTGGGTGGCCCTG...GCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR TCA 72 bp ACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTaGCTCCTGCTGCTTGCTTCACTGCCTGAGAAACTC +
Preference number: 3 (lower is better)
Translates to: TLATGHRIDGAI*LLLLASLPEKL
Trigger: GAGTTTCTCAGGCAGTGAAGCAAGCAGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR TCA 72 bp CAGATGACCATATCTCGCTCTATGTCGTCCCAGGACTaGATTGGCTCTCCACTGGGGGTGTACAGTGCTCTA +
Preference number: 3 (lower is better)
Translates to: QMTISRSMSSQD*IGSPLGVYSAL
Trigger: TAGAGCACTGTACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGACGACATAGAGCGAGATATGGTCATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR GCA 72 bp CAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTaGTTGCTTCACTGCCTGAGAAACTCCACTTTCCAA +
Preference number: 3 (lower is better)
Translates to: QATGSMALFDSC*LLHCLRNSTFQ
Trigger: TTGGAAAGTGGAGTTTCTCAGGCAGTGAAGCAAGCAGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGTCCTTCAACCTACCATaGAGGGAGGATTCTGACAGC +
Preference number: 3 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGSFNLP*REDSDS
Trigger: GCTGTCAGAATCCTCCCTCAATGGTAGGTTGAAGGA...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR CAA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTTATGGTCAGTTTGAATaGGGCTATCCGATCCCAAAT +
Preference number: 3 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPAYGQFE*GYPIPN
Trigger: ATTTGGGATCGGATAGCCCAATTCAAACTGACCATA...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACGCTGGGTGGGTCATTTaGAGACGAGAGGAGCAGTCT +
Preference number: 3 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDAGWVI*RREEQS
Trigger: AGACTGCTCCTCTCGTCTCAAAATGACCCACCCAGC...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR-3UTR CAA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTAGAGACCCAAATTTTTaGCTCATTCTTCAGCGAAAG +
Preference number: 3 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPARDPNF*LILQRK
Trigger: CTTTCGCTGAAGAATGAGCAAAAAATTTGGGTCTCT...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR GCA 72 bp TGGCACTTTCTTGCAGAACCTCTTCTGCTAAGTTTCTaGCATGTTCCTGATGAGCTGTGGTCCAGGCACCAT +
Preference number: 3 (lower is better)
Translates to: WHFLAEPLLLSF*HVPDELWSRHH
Trigger: ATGGTGCCTGGACCACAGCTCATCAGGAACATGGCAGAAACTTAGCAGAAGAGGTTCTGCAAGAAAGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR GCA 72 bp TGTCTGAGGGTTCTGGCAGTTGCTTCAGACCAAGGTTaGTGGCACTTTCTTGCAGAACCTCTTCTGCTAAGT +
Preference number: 3 (lower is better)
Translates to: CLRVLAVASDQG*WHFLAEPLLLS
Trigger: ACTTAGCAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAGAACCCTCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR GCA 72 bp TCTGGCATTAAATGGGTGTCTGAGGGTTCTGGCAGTTaGTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGA +
Preference number: 3 (lower is better)
Translates to: SGIKWVSEGSGS*FRPRLLALSCR
Trigger: TCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAGAACCCTCAGACACCCATTTAATGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR CCA 72 bp CTGAGGGTTCTGGCAGTTGCTTCAGACCAAGGTTGCTaGCACTTTCTTGCAGAACCTCTTCTGCTAAGTTTC +
Preference number: 3 (lower is better)
Translates to: LRVLAVASDQGC*HFLAEPLLLSF
Trigger: GAAACTTAGCAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAGAACCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGGATCGATGGCGCTATTaGACTCCTGCTGCTTGCTTC +
Preference number: 3 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERDRWRY*TPAACF
Trigger: GAAGCAAGCAGCAGGAGTCAAATAGCGCCATCGATC...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR TCA 72 bp GATGACACCTTGCATCTGGCAAATGCATCAGGAATATaGGCCAAGACAAGAAGAGTGATGGGGCGATGCAGT +
Preference number: 3 (lower is better)
Translates to: DDTLHLANASGI*AKTRRVMGRCS
Trigger: ACTGCATCGCCCCATCACTCTTCTTGTCTTGGCTCATATTCCTGATGCATTTGCCAGATGCAAGGTGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR TCA 72 bp ATGTTGCTGTGGGGTGGGACTGATGAGTTTTATCAGTaGGCCCTTGTGGGTAGAGCTCTGTCCCAAGTAAAT +
Preference number: 3 (lower is better)
Translates to: MLLWGGTDEFYQ*ALVGRALSQVN
Trigger: ATTTACTTGGGACAGAGCTCTACCCACAAGGGCTCACTGATAAAACTCATCAGTCCCACCCCACAGCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR CCA 72 bp CTTAAGCTGCAGGCCTCCTGGGACAAGCGTGTTTGCTaGAAGGCTTTTAATGTGTTGGTAGACATAAGAGGA +
Preference number: 3 (lower is better)
Translates to: LKLQASWDKRVC*KAFNVLVDIRG
Trigger: TCCTCTTATGTCTACCAACACATTAAAAGCCTTCCAGCAAACACGCTTGTCCCAGGAGGCCTGCAGCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR CCA 72 bp CTTCTGCTAAGTTTCTGCCATGTTCCTGATGAGCTGTaGTCCAGGCACCATGGTGAATGTGATACTCTGTCT +
Preference number: 3 (lower is better)
Translates to: LLLSFCHVPDEL*SRHHGECDTLS
Trigger: AGACAGAGTATCACATTCACCATGGTGCCTGGACCACAGCTCATCAGGAACATGGCAGAAACTTAGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR CCA 72 bp CCAGGTTTGAATCCCATCACTACCACTTCCTGGCAGTaGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGG +
Preference number: 3 (lower is better)
Translates to: PGLNPITTTSWQ*KFWVSDLTSQR
Trigger: CCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGAAGTGGTAGTGATGGGATTCAAACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR CAA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGAGTCTATCTCCTTCCTaGCTCTGTCTGCATTGCCTC +
Preference number: 3 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERSLSPS*LCLHCL
Trigger: GAGGCAATGCAGACAGAGCAAGGAAGGAGATAGACT...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAATATTGGGATCTACCTaGTTCTGTAGAAAATGGTTC +
Preference number: 3 (lower is better)
Translates to: SSSFLTSATVSSPVSSREILGST*FCRKWF
Trigger: GAACCATTTTCTACAGAACAAGGTAGATCCCAATAT...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR TCA 72 bp AATAGCACACTTCTGGGATACGTGAAGCACGAGTCATaGATCCGAATGCCTCTGGCATCCATGAAGTATCAC +
Preference number: 3 (lower is better)
Translates to: NSTLLGYVKHES*IRMPLASMKYH
Trigger: GTGATACTTCATGGATGCCAGAGGCATTCGGATTCATGACTCGTGCTTCACGTATCCCAGAAGTGTGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452803.1
3UTR GCA 72 bp TACCTTAAGCTGCAGGCCTCCTGGGACAAGCGTGTTTaGTGGAAGGCTTTTAATGTGTTGGTAGACATAAGA +
Preference number: 3 (lower is better)
Translates to: YLKLQASWDKRV*WKAFNVLVDIR
Trigger: TCTTATGTCTACCAACACATTAAAAGCCTTCCAGCAAACACGCTTGTCCCAGGAGGCCTGCAGCTTAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR GCA 72 bp TCTCCAGTGTTTTTACCATTTTCAAATACCTTAAGCTaGAGGCCTCCTGGGACAAGCGTGTTTGCTGGAAGG +
Preference number: 3 (lower is better)
Translates to: SPVFLPFSNTLS*RPPGTSVFAGR
Trigger: CCTTCCAGCAAACACGCTTGTCCCAGGAGGCCTGCAGCTTAAGGTATTTGAAAATGGTAAAAACACTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR GCA 72 bp TCTCAGAGGCTATTTCATCATATGTGGAAGACCAGTTaGCATGGGTATTACGCCGGGTGGATACAGTTCAAC +
Preference number: 3 (lower is better)
Translates to: SQRLFHHMWKTS*HGYYAGWIQFN
Trigger: GTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATATGATGAAATAGCCTCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR CCA 72 bp GACTTTAATCGTTGGTACAGGGCCAAAAGAACTCCTTaGATGTACATCTTAGCTCCTGAGGGGCTGAAACCT +
Preference number: 3 (lower is better)
Translates to: DFNRWYRAKRTP*MYILAPEGLKP
Trigger: AGGTTTCAGCCCCTCAGGAGCTAAGATGTACATCCAAGGAGTTCTTTTGGCCCTGTACCAACGATTAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR GCA 72 bp GAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTaGTCAGATACAGGAGAGATGCTGAGGCTGCTGATA +
Preference number: 3 (lower is better)
Translates to: ETRQPQLKGKEY*SDTGEMLRLLI
Trigger: TATCAGCAGCCTCAGCATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR GCA 72 bp GGTCTTATATGCAACCATGATATCACCTCTGGCAAATaGACTCACTCGGTCAAAGGTCAAACCCAAAGCAAG +
Preference number: 3 (lower is better)
Translates to: GLICNHDITSGK*THSVKGQTQSK
Trigger: CTTGCTTTGGGTTTGACCTTTGACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR CCA 72 bp GAGGCTATTTCATCATATGTGGAAGACCAGTTGCCATaGGTATTACGCCGGGTGGATACAGTTCAACTATTC +
Preference number: 3 (lower is better)
Translates to: EAISSYVEDQLP*VLRRVDTVQLF
Trigger: GAATAGTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATATGATGAAATAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR CCA 72 bp TTCCATAGAGGATTTTCAACTCTAGAATGTTTCCACTaGCCTGGCTTACTGGTTCCTTCATGTTTTATGGCC +
Preference number: 3 (lower is better)
Translates to: FHRGFSTLECFH*PGLLVPSCFMA
Trigger: GGCCATAAAACATGAAGGAACCAGTAAGCCAGGCCAGTGGAAACATTCTAGAGTTGAAAATCCTCTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCGTTGATGGAAGAACCTaGAAGCCTTTGATGAATCTT +
Preference number: 3 (lower is better)
Translates to: KGLICNHDITSGKCTHSVVDGRT*KPLMNL
Trigger: AAGATTCATCAAAGGCTTCAAGGTTCTTCCATCAAC...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR TCA 72 bp CTTAATTTCTTGGCCATTCTCATCAAAAAGCCGCATTaGAGAATAATTGAGGCCTGGTGGGTTGATGGAAGA +
Preference number: 3 (lower is better)
Translates to: LNFLAILIKKPH*RIIEAWWVDGR
Trigger: TCTTCCATCAACCCACCAGGCCTCAATTATTCTTCAATGCGGCTTTTTGATGAGAATGGCCAAGAAATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR GCA 72 bp TCACCATCAATACTTCTGTTTATAGATCTGTTTAGATaGTACAACTCACAACAAGGCAGAATGGCAGGGGTC +
Preference number: 3 (lower is better)
Translates to: SPSILLFIDLFR*YNSQQGRMAGV
Trigger: GACCCCTGCCATTCTGCCTTGTTGTGAGTTGTAGCATCTAAACAGATCTATAAACAGAAGTATTGATGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
3UTR CCA 72 bp ATGTGGAAGACCAGTTGCCATGGGTATTACGCCGGGTaGATACAGTTCAACTATTCAATGAATATAGGATTA +
Preference number: 3 (lower is better)
Translates to: MWKTSCHGYYAG*IQFNYSMNIGL
Trigger: TAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR-3UTR CAA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTGGCCAAAAGAACTCCTaGGATGTACATCTTAGCTCC +
Preference number: 3 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIGQKNS*DVHLSS
Trigger: GGAGCTAAGATGTACATCCAAGGAGTTCTTTTGGCC...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTTCACAAACTTCCCAATaGCCACATCCAGGTAGCAGA +
Preference number: 3 (lower is better)
Translates to: KSVLKAAVTTERYIVFSISQTSQ*PHPGSR
Trigger: TCTGCTACCTGGATGTGGCAATTGGGAAGTTTGTGA...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTGTACTGTTGTAATTTaGGTTTGCGGCTCAGGCCAA +
Preference number: 3 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQCTVVI*VCGSGQ
Trigger: TTGGCCTGAGCCGCAAACCAAAATTACAACAGTACA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR-3UTR CAA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTAGGTGTGATGGAATTTaGCAGGCATTTTTCAAGCAG +
Preference number: 3 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIRCDGI*QAFFKQ
Trigger: CTGCTTGAAAAATGCCTGCAAAATTCCATCACACCT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAGGCTTTTAATGTGTaGGTAGACATAAGAGGAGAA +
Preference number: 3 (lower is better)
Translates to: NSIRIQKGLICNHDITSGKAFNV*VDIRGE
Trigger: TTCTCCTCTTATGTCTACCAACACATTAAAAGCCTT...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTCTGGTCAGGTATCTGTaGACTGGTACAGTTGAAATT +
Preference number: 3 (lower is better)
Translates to: KSVLKAAVTTERYIVFSILVRYL*TGTVEI
Trigger: AATTTCAACTGTACCAGTCAACAGATACCTGACCAG...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR-3UTR CAA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTCACTCAGGGTGTTGTTaGTTAGATGGTTTTCCTAGA +
Preference number: 3 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIHSGCC*LDGFPR
Trigger: TCTAGGAAAACCATCTAACAAACAACACCCTGAGTG...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR TCA 72 bp AGCTATATAAACCAAATCAACTTGAGAACTGCTTCATaGTTGCCTGTCGAAGTCTCAAATGTTGTCAATTCA +
Preference number: 3 (lower is better)
Translates to: SYINQINLRTAS*LPVEVSNVVNS
Trigger: TGAATTGACAACATTTGAGACTTCGACAGGCAATCATGAAGCAGTTCTCAAGTTGATTTGGTTTATATAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR GCA 72 bp CTTAAAGAGCTATATAAACCAAATCAACTTGAGAACTaGTTCATGATTGCCTGTCGAAGTCTCAAATGTTGT +
Preference number: 3 (lower is better)
Translates to: LKELYKPNQLEN*FMIACRSLKCC
Trigger: ACAACATTTGAGACTTCGACAGGCAATCATGAAGCAGTTCTCAAGTTGATTTGGTTTATATAGCTCTTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR CCA 72 bp GATACAGTTCAACTATTCAATGAATATAGGATTAGGTaGTTGTCCAAGGCTCCTTCAATGTTGAGATTTTCT +
Preference number: 3 (lower is better)
Translates to: DTVQLFNEYRIR*LSKAPSMLRFS
Trigger: AGAAAATCTCAACATTGAAGGAGCCTTGGACAACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGGGTGGCTGGCTGACATaGCGCTACTCGCCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWGGWLT*RYSPPF
Trigger: AAAGGGCGGCGAGTAGCGGCATGTCAGCCAGCCACC...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp CCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCACCATGGTGGCTGGCTaGCATGCCGCTACTCGCCGC +
Preference number: 4 (lower is better)
Translates to: PGTQHCPASISLALLLLSTMVAG*HAATRR
Trigger: GCGGCGAGTAGCGGCATGTCAGCCAGCCACCATGGT...GCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTGCGGAGCGTCGCTTCTaGGCTGTGCCACGGCCACAT +
Preference number: 4 (lower is better)
Translates to: SFLTSATVSSPVSSREPSAERRF*AVPRPH
Trigger: ATGTGGCCGTGGCACAGCTCAGAAGCGACGCTCCGC...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGACCATGGTGGCTGGCTaGCATGCCGCTACTCGCCGC +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGTMVAG*HAATRR
Trigger: GCGGCGAGTAGCGGCATGTCAGCCAGCCACCATGGT...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
3UTR CAA 72 bp CTGGGGGTGTACAGTGCTCTAGCTGGGTGGGTCATTTaGAGACGAGAGGAGCAGTCTTGCAGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGVYSALAGWVI*RREEQSCSSCL
Trigger: CAGGCAGCTGCTGCAAGACTGCTCCTCTCGTCTCAAAATGACCCACCCAGCTAGAGCACTGTACACCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGGTGGCTGGCTGACATaGCGCTACTCGCCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGGGWLT*RYSPPF
Trigger: AAAGGGCGGCGAGTAGCGGCATGTCAGCCAGCCACC...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAGTCGCTTCTGAGCTGTaGCACGGCCACATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SSSFLTSATVSSPVSSREVASEL*HGHISS
Trigger: CGAGCTGATGTGGCCGTGGCACAGCTCAGAAGCGAC...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCTGGGTGGGTCATTTTaGGACGAGAGGAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWLGGSF*DERSSL
Trigger: AAGACTGCTCCTCTCGTCTCAAAATGACCCACCCAG...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATATGTCGTCCCAGGACTaGATTGGCTCTCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNMSSQD*IGSPLG
Trigger: CCCCAGTGGAGAGCCAATTCAGTCCTGGGACGACAT...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGACAATGTCTGTGGCTTaGGGGCCCTGCTGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGTMSVA*GPCCLR
Trigger: CCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGT...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp CTTCTTGTTCTCCGGCATCCCTTCAATTCTGTGAGCCCCCTCTTTCGCTTCATGGCAGGCAGCCTGGGATaGAATCTCAGCCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LLVLRHPFNSVSPLFRFMAGSLG*NLSQPT
Trigger: AGTGGGCTGGCTGAGATTTCATCCCAGGCTGCCTGC...CATGAAGCGAAAGAGGGGGCTCACAGAATTGAAGGGATGCCGGAGAACAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCTCAACCACCACGGGCTaGACAGGGCTCTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: PGTQHCPASISLALLLLSSTTTG*TGLLVG
Trigger: TCCTACCAAGAGCCCTGTGCAGCCCGTGGTGGTTGA...GCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATAATCACGCTGGGAGCTaGAGGCTGGAGCTGTTCCTA +
Preference number: 4 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDNHAGS*RLELFL
Trigger: TAGGAACAGCTCCAGCCTGCAGCTCCCAGCGTGATT...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR CAA 72 bp GTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTaGAATCCCATCACTACCACTTCCTGGCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: VERKLWSQGHPG*NPITTTSWQWK
Trigger: TTTCCACTGCCAGGAAGTGGTAGTGATGGGATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACACCATGGTGGCTGGCTaGCATGCCGCTACTCGCCGC +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDTMVAG*HAATRR
Trigger: GCGGCGAGTAGCGGCATGTCAGCCAGCCACCATGGT...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTTCAACCACCACGGGCTaGACAGGGCTCTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGSTTTG*TGLLVG
Trigger: TCCTACCAAGAGCCCTGTGCAGCCCGTGGTGGTTGA...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGAGAGTGATGGGGCGATaGAGTTCAAAAAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWRVMGR*SSKSAA
Trigger: AGCTGCGCTTTTTGAACTGCATCGCCCCATCACTCT...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTCGAGAGGAGCAGTCTTaGAGCAGCTGCCTGTATGGC +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGREEQS*SSCLYG
Trigger: GCCATACAGGCAGCTGCTGCAAGACTGCTCCTCTCG...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAGTTCGAGGGCTTCCTTaGCGTCTGCCAAGAACACTC +
Preference number: 4 (lower is better)
Translates to: SSSFLTSATVSSPVSSREVRGLP*RLPRTL
Trigger: GAGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAAC...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTCCCCGTTATAGCTGGTaGCCCCACAACCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGPRYSW*PHNLAF
Trigger: GAAAGCCAGGTTGTGGGGGCACCAGCTATAACGGGG...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGAGGAACCATGGTGGCTaGCTGACATGCCGCTACTCG +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGRNHGG*LTCRYS
Trigger: CGAGTAGCGGCATGTCAGCCAGCCACCATGGTTCCT...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp CTGGCAGTTGCTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCTGTCTGCAACCCTCAGTTaGCCCACTGGAGCACTGACA +
Preference number: 4 (lower is better)
Translates to: LAVASDQGCWHFLAEPLLSATLS*PTGALT
Trigger: TGTCAGTGCTCCAGTGGGTCAACTGAGGGTTGCAGA...CAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTTTGACTCTGATAGGATaGCCAATAGCCAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SFLTSATVSSPVSSREPSLTLIG*PIARQP
Trigger: GGGCTGCCTGGCTATTGGTCATCCTATCAGAGTCAA...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTAACCACCTCCATGCCTaGTCGGAGATTGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGNHLHA*SEIGTL
Trigger: CAAGGTCCCAATCTCCGATCAGGCATGGAGGTGGTT...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATCATGCCACTGTGAGATaGAGCTTGCGTGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNHATVR*SLRAGL
Trigger: AAGACCTGCACGCAAGCTGCATCTCACAGTGGCATG...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACGGTGTGTGGCTGCCATaGCACTGTGAGATGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDGVWLP*HCEMQL
Trigger: AAGCTGCATCTCACAGTGGCATGGCAGCCACACACC...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTCTTCTGGTGTGTGGCTaGCATGCCACTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGLLVCG*HATVRC
Trigger: GCATCTCACAGTGGCATGGCAGCCACACACCAGAAG...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGATATACTTTGGAGGCTaGTCTGGCAAGCCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWIYFGG*SGKPKL
Trigger: CAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATAT...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp AGTGAAGTGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATCCATATACTTTGGAGGCTaGTCTGGCAAGCCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SEVGRAEALVSGPPRFESIYFGG*SGKPKL
Trigger: CAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATAT...GGATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCACTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp TGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTACAATCCTGGTGGCTGGCTGACATaGCGCTACTCGCCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: CPASISLALLLLSLQYNPGGWLT*RYSPPF
Trigger: AAAGGGCGGCGAGTAGCGGCATGTCAGCCAGCCACC...AGGATTGTACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTACTGGGGGTGTACAGTaGTCTAGCTGGGTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGTGGVQ*SSWVGH
Trigger: ATGACCCACCCAGCTAGAGCACTGTACACCCCCAGT...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAGATACTGCTGCTGAATaGACGAGTCTGTTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSSFLTSATVSSPVSSREDTAAE*TSLLGP
Trigger: TGGCCCCAACAGACTCGTGCATTCAGCAGCAGTATC...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTGAGGGTTCTGGCAGTTaGTTCAGACCAAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SFLTSATVSSPVSSREPSEGSGS*FRPRLL
Trigger: CAGCAACCTTGGTCTGAAGCAACTGCCAGAACCCTC...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp ATAGTGAAGTGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATCCAAAACCACCTCCATaGCTGATCGGAGATTGGGAC +
Preference number: 4 (lower is better)
Translates to: IVKWVERKLWSQGHPGLNPKPPP*LIGDWD
Trigger: GTCCCAATCTCCGATCAGGCATGGAGGTGGTTTTGG...ATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCACTTCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGCTTTGGAGGCTGCTCTaGCAAGCCCAAGTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGLWRLL*QAQVVP
Trigger: CGGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAG...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp GAAACCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGCAGGGGTCAGGGCTaGGCATGTGATGACACCTTG +
Preference number: 4 (lower is better)
Translates to: ETMSHRHTDDHISLYVVPGRGQG*ACDDTL
Trigger: CAAGGTGTCATCACATGCCCAGCCCTGACCCCTGCC...TGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTCCCAGGACTGAATTaGCTCTCCACTGGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGVPGLN*LSTGGV
Trigger: TACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGAC...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTTGCTCAGCCTGTAATTaGGGGCCAAGTTTACAGAGA +
Preference number: 4 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPACSACN*GPSLQR
Trigger: TCTCTGTAAACTTGGCCCCCAATTACAGGCTGAGCA...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTAGGCCACAGGATCGATaGCGCTATTTGACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SFLTSATVSSPVSSREPSRPQDR*RYLTPA
Trigger: AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCT...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp TGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTACAATCCTGCTGCCATGCCACTGTaGGATGCAGCTTGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: CPASISLALLLLSLQYNPAAMPL*DAACVQ
Trigger: CTGCACGCAAGCTGCATCTCACAGTGGCATGGCAGC...AGGATTGTACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CTTCTTGTTCTCCGGCATCCCTTCAATTCTGTGAGCCCCCTCTTTCGCTTCATGCTGGGTGGGTCATTTTaGGACGAGAGGAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LLVLRHPFNSVSPLFRFMLGGSF*DERSSL
Trigger: AAGACTGCTCCTCTCGTCTCAAAATGACCCACCCAG...CATGAAGCGAAAGAGGGGGCTCACAGAATTGAAGGGATGCCGGAGAACAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp GCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGAAAGCAGAATGTCGTCCCAGGACTaGATTGGCTCTCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: AEPSVQSFHLQRLLQESRMSSQD*IGSPLG
Trigger: CCCCAGTGGAGAGCCAATTCAGTCCTGGGACGACAT...TCTGCTTTCCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp GCACGAGTCATGAATCCGAATGCCTCTGGCATCCATGAAGTATCACGTCTCAGAGACCCACTGGAGCACTaGCAGGTCTGTTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ARVMNPNASGIHEVSRLRDPLEH*QVCFSW
Trigger: CCAAGAGAAACAGACCTGTCAGTGCTCCAGTGGGTC...TCTGAGACGTGATACTTCATGGATGCCAGAGGCATTCGGATTCATGACTCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR TCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTCCTTCTGTTCATTCATaGCCAGGTTCAACTGTAGTC +
Preference number: 4 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPAPSVHS*PGSTVV
Trigger: GACTACAGTTGAACCTGGTCATGAATGAACAGAAGG...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATGCTTGCTTCACTGCCTaGGAAACTCCACTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDACFTA*ETPLSN
Trigger: ATTGGAAAGTGGAGTTTCTCAGGCAGTGAAGCAAGC...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp TGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATCCCATCACTCCAGAGTTCTCCACATaGAACATACACCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: WVERKLWSQGHPGLNPITPEFST*NIHQFI
Trigger: GATGAACTGGTGTATGTTTCATGTGGAGAACTCTGG...AGTGATGGGATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGACCCCCAAGACTAGCTaGGGAGCAGCATGGCTTATA +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGTPKTS*GAAWLI
Trigger: TATAAGCCATGCTGCTCCTCAGCTAGTCTTGGGGGT...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp CCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCGTTTTGTGTTGGGCTaGTTATACAGGTTGCTCGGC +
Preference number: 4 (lower is better)
Translates to: PGTQHCPASISLALLLLSRFVLG*LYRLLG
Trigger: GCCGAGCAACCTGTATAAGCAGCCCAACACAAAACG...GCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGATGTCCCCATCATGTTaGTGTGGGGTGGGACTGATG +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGMSPSC*CGVGLM
Trigger: CATCAGTCCCACCCCACAGCAACATGATGGGGACAT...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTATGTCCCCATCATGTTaGTGTGGGGTGGGACTGATG +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGMSPSC*CGVGLM
Trigger: CATCAGTCCCACCCCACAGCAACATGATGGGGACAT...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATCTATTTGACTCCTGCTaGTTGCTTCACTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDLFDSC*LLHCLR
Trigger: TCTCAGGCAGTGAAGCAAGCAGCAGGAGTCAAATAG...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTCTTCTGCTAAGTTTCTaGCATGTTCCTGATGAGCTG +
Preference number: 4 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPALLLSF*HVPDEL
Trigger: CAGCTCATCAGGAACATGGCAGAAACTTAGCAGAAG...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATGCTTCAGACCAAGGTTaGTGGCACTTTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDASDQG*WHFLAE
Trigger: TTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGC...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTCCAAAACCACCTCCATaGCTGATCGGAGATTGGGAC +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGPKPPP*LIGDWD
Trigger: GTCCCAATCTCCGATCAGGCATGGAGGTGGTTTTGG...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCACAACAAGGCAGAATaGCAGGGGTCAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSHNKAE*QGSGLG
Trigger: GCCCAGCCCTGACCCCTGCCATTCTGCCTTGTTGTG...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTCAGCAAGGTGATGGTTaGTACAGTAACTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPAQQGDG*YSNSGK
Trigger: TTTGCCAGAGTTACTGTACCAACCATCACCTTGCTG...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATCTAGAATGTTTCCACTaGCCTGGCTTACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDLECFH*PGLLVP
Trigger: AGGAACCAGTAAGCCAGGCCAGTGGAAACATTCTAG...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTATTGCCTCATTAAGTTaGCCACTGGGAAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: SFLTSATVSSPVSSREPSIASLS*PLGRTG
Trigger: GCCTGTCCTTCCCAGTGGCCAACTTAATGAGGCAAT...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp CTTGATTCGAGGGAGGCAGATGAGGAGCTTCGTAGCAGGCAGCCTGGGATGAAAACCACTTCCTGGCAGTaGAAATTTTGGGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: LDSREADEELRSRQPGMKTTSWQ*KFWVSD
Trigger: GTCACTCACCCAAAATTTCCACTGCCAGGAAGTGGT...TTTCATCCCAGGCTGCCTGCTACGAAGCTCCTCATCTGCCTCCCTCGAATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp ATAGTGAAGTGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATCTGAGTCTTGGTGCCTaGAATACAGAGGAATGGAAC +
Preference number: 4 (lower is better)
Translates to: IVKWVERKLWSQGHPGLNLSLGA*NTEEWN
Trigger: GTTCCATTCCTCTGTATTTCAGGCACCAAGACTCAG...ATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCACTTCACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACACAGGTTGCTCGGCTTaGCTGCTATACGTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDTGCSA*LLYVWL
Trigger: CAACCAAACGTATAGCAGTCAAGCCGAGCAACCTGT...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCATGTCGTCCCAGGACTaGATTGGCTCTCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSMSSQD*IGSPLG
Trigger: CCCCAGTGGAGAGCCAATTCAGTCCTGGGACGACAT...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTGATAGTGCTTCTCTGTaGTCTTCTGCTCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPADSASL*SSAPVF
Trigger: AAAAACAGGAGCAGAAGATCACAGAGAAGCACTATC...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAGACAATCAGCCCAGCTaGTCTTTCTTCACAGTGACT +
Preference number: 4 (lower is better)
Translates to: SSSFLTSATVSSPVSSREDNQPS*SFFTVT
Trigger: AGTCACTGTGAAGAAAGATCAGCTGGGCTGATTGTC...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp CCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCTCCAAGGCAGTGCTATaGAAGGCCACAAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PGTQHCPASISLALLLLSSKAVL*KATSAF
Trigger: AAAAGCACTTGTGGCCTTTCATAGCACTGCCTTGGA...GCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGAGATGCAGCTTGCGTaGAGGTCTTCATCCGTAAAG +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGEMQLA*RSSSVK
Trigger: CTTTACGGATGAAGACCTGCACGCAAGCTGCATCTC...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp CATATGTGGAAGACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACCATGCCACTGTGAGATaGAGCTTGCGTGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: HMWKTSCHGYYAGWIQFNHATVR*SLRAGL
Trigger: AAGACCTGCACGCAAGCTGCATCTCACAGTGGCATG...GTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGCTTCTGGTGTGTGGCTaGCATGCCACTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: LLLLSLQYNPSTYKGCFRLLVCG*HATVRC
Trigger: GCATCTCACAGTGGCATGGCAGCCACACACCAGAAG...CCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGCGTTTTGTGTTGGGCTaGTTATACAGGTTGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGRFVLG*LYRLLG
Trigger: GCCGAGCAACCTGTATAAGCAGCCCAACACAAAACG...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTTCATCTGTCCCACTGTaGAAATGGAGTCACACGCTC +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGSSVPL*KWSHTL
Trigger: GAGCGTGTGACTCCATTTGCACAGTGGGACAGATGA...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp CTGGCAGTTGCTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCTGGATTCAGCTTTTCTGTaGACTCCTCCAGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LAVASDQGCWHFLAEPLLDSAFL*TPPAAR
Trigger: CCTTGCTGCTGGAGGAGTGCACAGAAAAGCTGAATC...CAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTATCACCTCTGGCAAATaGACTCACTCGGTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SFLTSATVSSPVSSREPSITSGK*THSVKG
Trigger: ACCTTTGACCGAGTGAGTGCATTTGCCAGAGGTGAT...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGTCTTCATGGGAGGACTaGTCGGAACAAGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGSSWED*SEQAVL
Trigger: AAGGACTGCTTGTTCCGAGCAGTCCTCCCATGAAGA...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACAGGAACCATGGTGGCTaGCTGACATGCCGCTACTCG +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDRNHGG*LTCRYS
Trigger: CGAGTAGCGGCATGTCAGCCAGCCACCATGGTTCCT...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp GACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACTATTCAATGAAAGGAACCATGGTGGCTaGCTGACATGCCGCTACTCG +
Preference number: 4 (lower is better)
Translates to: DQLPWVLRRVDTVQLFNERNHGG*LTCRYS
Trigger: CGAGTAGCGGCATGTCAGCCAGCCACCATGGTTCCT...TTCATTGAATAGTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp GCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGAAAGCAGAGTCCCAGGACTGAATTaGCTCTCCACTGGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: AEPSVQSFHLQRLLQESRVPGLN*LSTGGV
Trigger: TACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGAC...TCTGCTTTCCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTGTCCCACTGTGCAAATaGAGTCACACGCTCACTCAA +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGVPLCK*SHTLTQ
Trigger: TTGAGTGAGCGTGTGACTCCATTTGCACAGTGGGAC...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTGCCAAAAGAACTCCTTaGATGTACATCTTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPAAKRTP*MYILAP
Trigger: AGGAGCTAAGATGTACATCCAAGGAGTTCTTTTGGC...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGAACTCCTCATTAAGTTaGCCACTGGGAAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGNSSLS*PLGRTG
Trigger: GCCTGTCCTTCCCAGTGGCCAACTTAATGAGGAGTT...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTCTGAGTCTTGGTGCCTaGAATACAGAGGAATGGAAC +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGLSLGA*NTEEWN
Trigger: GTTCCATTCCTCTGTATTTCAGGCACCAAGACTCAG...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp CCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCAGTTTAATTTCCTGTTaGGTCTGTTCGGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGTQHCPASISLALLLLSSLISC*VCSVQP
Trigger: AGGCTGGACCGAACAGACTCAACAGGAAATTAAACT...GCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CAGATACACACAGAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAACAATGTCTGTGGCTTaGGGGCCCTGCTGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: QIHTETRQPQLKGKEYCSTMSVA*GPCCLR
Trigger: CCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGT...TGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTCTGTGTGTATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACCAGCTTCGTGGATGGTaGCACCACAATGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDQLRGW*HHNVCG
Trigger: GCCACAGACATTGTGGTGTCACCATCCACGAAGCTG...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAATCATATGGTCAGTTTaGATTGGGCTATCCGATCCC +
Preference number: 4 (lower is better)
Translates to: SSSFLTSATVSSPVSSREIIWSV*IGLSDP
Trigger: GGGATCGGATAGCCCAATTCAAACTGACCATATGAT...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGCTCCCATCACCATGGTaGTTTGCTGAGTCATATCCT +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGLPSPW*FAESYP
Trigger: AGGATATGACTCAGCAAATCACCATGGTGATGGGAG...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGTACCTGGGAAGTGTGTaGCAAGCCTTCATTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGYLGSV*QAFIRR
Trigger: TCTTCGAATGAAGGCTTGTCACACACTTCCCAGGTA...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACCTTCTGGTGTGTGGCTaGCATGCCACTGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDLLVCG*HATVRC
Trigger: GCATCTCACAGTGGCATGGCAGCCACACACCAGAAG...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTATATACTTTGGAGGCTaGTCTGGCAAGCCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGIYFGG*SGKPKL
Trigger: CAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATAT...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCCCCAAAATGCAGGTaGCAAGTCCACATCAGCCCT +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSPPKCR*QVHISP
Trigger: AGGGCTGATGTGGACTTGGCACCTGCATTTTGGGGG...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGAATCAACTTGAGAACTaGTTCATGATTGCCTGTCGA +
Preference number: 4 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWNQLEN*FMIACR
Trigger: TCGACAGGCAATCATGAAGCAGTTCTCAAGTTGATT...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAATATTCCCATCCAAAGTaGCTTCAGGGCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSSFLTSATVSSPVSSREYSHPK*LQGYFA
Trigger: AGCAAAGTAGCCCTGAAGGCACTTTGGATGGGAATA...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp CTGGCAGTTGCTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCTGCAAGAACACTCGTCTTaGGGCCATGTTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: LAVASDQGCWHFLAEPLLQEHSS*GHVQIQ
Trigger: CTGAATCTGAACATGGCCGCAAGACGAGTGTTCTTG...CAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp TGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATCCCATCACTGGATCTTCTTGCATTTaGTTTTCTTCCGGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: WVERKLWSQGHPGLNPITGSSCI*FSSGSV
Trigger: TACAGAACCGGAAGAAAAGCAAATGCAAGAAGATCC...AGTGATGGGATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTCCTTATCCAAGGCAGTaGTATGAAAGGCCACAAGTG +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGPYPRQ*YERPQV
Trigger: CACTTGTGGCCTTTCATAGCACTGCCTTGGATAAGG...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp CTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGATGTGGAAGACCAGTTaGCATGGGTATTACGCCGGG +
Preference number: 4 (lower is better)
Translates to: LLLLSLQYNPSTYKGCFRMWKTS*HGYYAG
Trigger: CCCGGCGTAATACCCATGGCAACTGGTCTTCCACAT...CCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACGAGGAATGGAACCCCTaGAAGCAATTGTTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDEEWNP*KQLFQS
Trigger: GGACTGAAACAATTGCTTCCAGGGGTTCCATTCCTC...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CCA 90 bp GGGATACGTGAAGCACGAGTCATGAATCCGAATGCCTCTGGCATCCATGAAGTAAATGCACGAGTCTGTTaGGGCCAAACTGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: GIREARVMNPNASGIHEVNARVC*GQTETA
Trigger: TGCAGTCTCAGTTTGGCCCCAACAGACTCGTGCATT...TACTTCATGGATGCCAGAGGCATTCGGATTCATGACTCGTGCTTCACGTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAAGAATAATTGAGGCCTaGTGGGTTGATGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: SSSFLTSATVSSPVSSRERIIEA*WVDGRT
Trigger: GGTTCTTCCATCAACCCACCAGGCCTCAATTATTCT...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp CTGGCAGTTGCTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCTGATGTTTCCACTGGCCTaGCTTACTGGTTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: LAVASDQGCWHFLAEPLLMFPLA*LTGSFM
Trigger: CATGAAGGAACCAGTAAGCCAGGCCAGTGGAAACAT...CAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGCTAGAATGTTTCCACTaGCCTGGCTTACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGLECFH*PGLLVP
Trigger: AGGAACCAGTAAGCCAGGCCAGTGGAAACATTCTAG...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACTGTAAGAAGGGCTTCTaGGTCTTGGTGCCTGAAATA +
Preference number: 4 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDCKKGF*VLVPEI
Trigger: TATTTCAGGCACCAAGACTCAGAAGCCCTTCTTACA...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp TATGTGGAAGACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACTAACAGGTTGCTCGGCTTaGCTGCTATACGTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: YVEDQLPWVLRRVDTVQLTGCSA*LLYVWL
Trigger: CAACCAAACGTATAGCAGTCAAGCCGAGCAACCTGT...TAGTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCTGATTAAAACATATTaGCACATTTCTAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWLIKTY*HISRDW
Trigger: CCAGTCCCTAGAAATGTGTCAATATGTTTTAATCAG...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACCTGGGTGGGTCATTTTaGGACGAGAGGAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDLGGSF*DERSSL
Trigger: AAGACTGCTCCTCTCGTCTCAAAATGACCCACCCAG...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp AGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACCAGCTTCGTGGATGGTaGCACCACAATGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SFHFISSIAAEPSVQSFHQLRGW*HHNVCG
Trigger: GCCACAGACATTGTGGTGTCACCATCCACGAAGCTG...GTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATAGTGTTTCTTTCCTCTaGAAAGCAGAGAGGACTATC +
Preference number: 4 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNSVSFL*KAERTI
Trigger: GATAGTCCTCTCTGCTTTTCAGAGGAAAGAAACACT...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTTTGAGAACTGCTTCATaGTTGCCTGTCGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGLRTAS*LPVEVS
Trigger: TGAGACTTCGACAGGCAATCATGAAGCAGTTCTCAA...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGTTGAGAACTGCTTCATaGTTGCCTGTCGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGLRTAS*LPVEVS
Trigger: TGAGACTTCGACAGGCAATCATGAAGCAGTTCTCAA...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCATAGCCAGGCAGCCCTaGGTTATCGCTCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NSIRIQKGLICNHDITSGIARQP*VIARLR
Trigger: CCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCTAT...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp ATAGTGAAGTGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATATTTGTTTCTTTTGCTaGGCAATGGACAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: IVKWVERKLWSQGHPGLNICFFC*AMDRSG
Trigger: TCCTGACCTGTCCATTGCTCAGCAAAAGAAACAAAT...ATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCACTTCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CTTAACCTCTCAGAGGCTATTTCATCATATGTGGAAGACCAGTTGCCATGGGTAAACCACCTCCATGCCTaGTCGGAGATTGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: LNLSEAISSYVEDQLPWVNHLHA*SEIGTL
Trigger: CAAGGTCCCAATCTCCGATCAGGCATGGAGGTGGTT...TACCCATGGCAACTGGTCTTCCACATATGATGAAATAGCCTCTGAGAGGTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCGTCTTGCAGCAGCTCTaGAATAGTTTTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSVLQQL*NSFAPG
Trigger: GCCTGGGGCAAAACTATTTCAGAGCTGCTGCAAGAC...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACGCTTCTGAGTCTTGGTaGCTGAAATACAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDASESW*LKYRGM
Trigger: CATTCCTCTGTATTTCAGGCACCAAGACTCAGAAGC...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp ACTTCCTGGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTATTTGGTGTGTGGCTGCCATaGCACTGTGAGATGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TSWQWKFWVSDLTSQRLFGVWLP*HCEMQL
Trigger: AAGCTGCATCTCACAGTGGCATGGCAGCCACACACC...AAATAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp ACTTCCTGGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTATTTACTGGGGGTGTACAGTaGTCTAGCTGGGTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: TSWQWKFWVSDLTSQRLFTGGVQ*SSWVGH
Trigger: ATGACCCACCCAGCTAGAGCACTGTACACCCCCAGT...AAATAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTTTAATTGTGGAGATGTaGCAGAGACAGCAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGLIVEM*QRQQLR
Trigger: ACGAAGCTGCTGTCTCTGGCACATCTCCACAATTAA...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCGGCTTCCTTGCCGTCTaGCAAGAACACTCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: KGLICNHDITSGKCTHSVGFLAV*QEHSSC
Trigger: GCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCC...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCCAGTTTCCTCACCAGTaGTACTGTCAGCTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: KGLICNHDITSGKCTHSVQFPHQ*YCQLPR
Trigger: ACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTG...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCATCAGTGAGCCCTTGTaGGTAGAGCTCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSISEPL*VELCPK
Trigger: CTTGGGACAGAGCTCTACCCACAAGGGCTCACTGAT...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAATGCTGTTTGATGTGTaGAGCAATCTTGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSSFLTSATVSSPVSSREMLFDV*SNLEVL
Trigger: CAGGACTTCAAGATTGCTCCACACATCAAACAGCAT...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTATGGTCAGTTTGAATTaGGCTATCCGATCCCAAATC +
Preference number: 4 (lower is better)
Translates to: SFLTSATVSSPVSSREPSMVSLN*AIRSQI
Trigger: GATTTGGGATCGGATAGCCCAATTCAAACTGACCAT...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTTTGTTCTGTAGAAAATaGTTCTCCAAGTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPALFCRK*FSKSTF
Trigger: AAAGGTGGACTTGGAGAACCATTTTCTACAGAACAA...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTACTGGCCTGGCTTACTaGTTCCTTCATGTTTTATGG +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGTGLAY*FLHVLW
Trigger: CCATAAAACATGAAGGAACCAGTAAGCCAGGCCAGT...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATGCTGCCATGCCACTGTaGGATGCAGCTTGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHAAMPL*DAACVQ
Trigger: CTGCACGCAAGCTGCATCTCACAGTGGCATGGCAGC...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACACAGGTTGCTCGGCTTaGCTGCTATACGTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDTGCSA*LLYVWL
Trigger: CAACCAAACGTATAGCAGTCAAGCCGAGCAACCTGT...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp TATTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTACAATGTCTGTGGCTTaGGGGCCCTGCTGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: YYAGWIQFNYSMNIGLGGTMSVA*GPCCLR
Trigger: CCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGT...ACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGAGTGTTTCTTTCCTCTaGAAAGCAGAGAGGACTATC +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGSVSFL*KAERTI
Trigger: GATAGTCCTCTCTGCTTTTCAGAGGAAAGAAACACT...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGATCGATGGCGCTATTTaGCTCCTGCTGCTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERIDGAI*LLLLAS
Trigger: TGAAGCAAGCAGCAGGAGTCAAATAGCGCCATCGAT...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCGTTTTCCGTCCAGGTaGGATATCTGGACCAAGGAT +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSRFPSR*DIWTKD
Trigger: ATCCTTGGTCCAGATATCTCACCTGGACGGAAAACG...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCTGGACAGGTCAGGATTaGTCCAGAGTTCTCCACATG +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSWTGQD*SRVLHM
Trigger: CATGTGGAGAACTCTGGATCAATCCTGACCTGTCCA...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp CCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCTTTACTATGCTTTGGTaGACAGCTGTGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PGTQHCPASISLALLLLSFTMLW*TAVFLL
Trigger: CAGAAGAAACACAGCTGTTCACCAAAGCATAGTAAA...GCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp GATTCGAGGGAGGCAGATGAGGAGCTTCGTAGCAGGCAGCCTGGGATGAAATCTGATTTCAGAAAGGTGTaGCTCTGTATGTCTTATAAG +
Preference number: 4 (lower is better)
Translates to: DSREADEELRSRQPGMKSDFRKV*LCMSYK
Trigger: CTTATAAGACATACAGAGGCACACCTTTCTGAAATC...AGATTTCATCCCAGGCTGCCTGCTACGAAGCTCCTCATCTGCCTCCCTCGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp TCTCCGGCATCCCTTCAATTCTGTGAGCCCCCTCTTTCGCTTCATGTAATCTCCTGCCATCTTCAGGTCTaGCTCCATTTAGATAAATCC +
Preference number: 4 (lower is better)
Translates to: SPASLQFCEPPLSLHVISCHLQV*LHLDKS
Trigger: GGATTTATCTAAATGGAGGCAGACCTGAAGATGGCA...GGAGATTACATGAAGCGAAAGAGGGGGCTCACAGAATTGAAGGGATGCCGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATGATTCTGGCATAATTTaGTCTGATCTCCATCAGTTG +
Preference number: 4 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNDSGII*SDLHQL
Trigger: CAACTGATGGAGATCAGAGCAAATTATGCCAGAATC...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACTTTTGATAGCTGTCTaGAATTCATCAATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSSFLTSATVSSPVSSRELLIAV*NSSISL
Trigger: CAGGCTGATTGATGAATTGCAGACAGCTATCAAAAG...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp GATTCGAGGGAGGCAGATGAGGAGCTTCGTAGCAGGCAGCCTGGGATGAAATCTACCAGTTCATCTCTTTaGAGGTCTTTTAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: DSREADEELRSRQPGMKSTSSSL*RSFKAN
Trigger: ATTTGCCTTAAAAGACCTGCAAAGAGATGAACTGGT...AGATTTCATCCCAGGCTGCCTGCTACGAAGCTCCTCATCTGCCTCCCTCGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp TCTCCGGCATCCCTTCAATTCTGTGAGCCCCCTCTTTCGCTTCATGTAATCTCCGCATGGCTTATAATCTaGCCATCTCTGTATTCGAAC +
Preference number: 4 (lower is better)
Translates to: SPASLQFCEPPLSLHVISAWLII*PSLYSN
Trigger: GTTCGAATACAGAGATGGGCAGATTATAAGCCATGC...GGAGATTACATGAAGCGAAAGAGGGGGCTCACAGAATTGAAGGGATGCCGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp CAGATACACACAGAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCACTTTGGAGGCTGCTCTaGCAAGCCCAAGTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: QIHTETRQPQLKGKEYCSLWRLL*QAQVVP
Trigger: CGGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAG...TGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTCTGTGTGTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CCA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATATGACACCTTGCATCTaGCAAATGCATCAGGAATAT +
Preference number: 4 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNMTPCI*QMHQEY
Trigger: ATATTCCTGATGCATTTGCCAGATGCAAGGTGTCAT...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACCAGCAGCTGCCTGTATaGCTTTCACCTATTAGAGGG +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDQQLPV*LSPIRG
Trigger: CCCTCTAATAGGTGAAAGCCATACAGGCAGCTGCTG...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CCA 90 bp CTTAACCTCTCAGAGGCTATTTCATCATATGTGGAAGACCAGTTGCCATGGGTATGCCTGATCGGAGATTaGGACCTTGAACCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: LNLSEAISSYVEDQLPWVCLIGD*DLEPPR
Trigger: TCTTGGGGGTTCAAGGTCCCAATCTCCGATCAGGCA...TACCCATGGCAACTGGTCTTCCACATATGATGAAATAGCCTCTGAGAGGTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp TATTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTGTAGAGCGGAAGCTCTaGTCTCAGGGCCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: YYAGWIQFNYSMNIGLGGVERKL*SQGHPG
Trigger: ACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTAC...ACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGCTGCCATGCCACTGTaGGATGCAGCTTGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQAAMPL*DAACVQ
Trigger: CTGCACGCAAGCTGCATCTCACAGTGGCATGGCAGC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp ACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAGATACAGGAGAGATGCCAAGACAAGAAGAGTaGTGGGGCGATGCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: TRQPQLKGKEYCSDTGEMPRQEE*WGDAVQ
Trigger: TTGAACTGCATCGCCCCATCACTCTTCTTGTCTTGG...CATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp ATAGTGAAGTGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATTGGCATAATTTGCTCTaGTCTCCATCAGTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: IVKWVERKLWSQGHPGLNWHNLL*SPSVVL
Trigger: TAAAACAACTGATGGAGATCAGAGCAAATTATGCCA...ATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCACTTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTATTTGGAAAGTTCTGTaGCAAACATCCACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGIWKVL*QTSTVL
Trigger: CAGAACTGTGGATGTTTGTCACAGAACTTTCCAAAT...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCGACCCACTGGAGCACTaGCAGGTCTGTTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NSIRIQKGLICNHDITSGDPLEH*QVCFSW
Trigger: CCAAGAGAAACAGACCTGTCAGTGCTCCAGTGGGTC...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp ACTAGGGTGCTACAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTCTGCAACCCTCAGTTaGCCCACTGGAGCACTGACA +
Preference number: 4 (lower is better)
Translates to: TRVLQTGSSSNRISFFKYSATLS*PTGALT
Trigger: TGTCAGTGCTCCAGTGGGTCAACTGAGGGTTGCAGA...ATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTGTAGCACCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR TCA 90 bp CTGGCAGTTGCTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCTGTCTTATATGCAACCATaGTATCACCTCTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: LAVASDQGCWHFLAEPLLSYMQP*YHLWQM
Trigger: CATTTGCCAGAGGTGATATCATGGTTGCATATAAGA...CAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCACCATGGTGATTTGCTaGGTCATATCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSTMVIC*VISSAG
Trigger: ACCTGCTGAGGATATGACTCAGCAAATCACCATGGT...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTTTTATGGCCCACCTaGCTTTTCATATTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGVLWPT*LFIFKL
Trigger: AAGCTTGAATATGAAAAGTCAGGTGGGCCATAAAAC...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp CTTAACCTCTCAGAGGCTATTTCATCATATGTGGAAGACCAGTTGCCATGGGTATGGACAGGTCAGGATTaGTCCAGAGTTCTCCACATG +
Preference number: 4 (lower is better)
Translates to: LNLSEAISSYVEDQLPWVWTGQD*SRVLHM
Trigger: CATGTGGAGAACTCTGGATCAATCCTGACCTGTCCA...TACCCATGGCAACTGGTCTTCCACATATGATGAAATAGCCTCTGAGAGGTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGGCCTTCATTCGAAGATaGGCTCTTACGTGTGAATCT +
Preference number: 4 (lower is better)
Translates to: LLLLSLQYNPSTYKGCFRAFIRR*ALTCES
Trigger: AGATTCACACGTAAGAGCTCATCTTCGAATGAAGGC...CCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CTTAACCTCTCAGAGGCTATTTCATCATATGTGGAAGACCAGTTGCCATGGGTAATCCCTTCAATTCTGTaGGCCCCCTCTTTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: LNLSEAISSYVEDQLPWVIPSIL*APSFAS
Trigger: TGAAGCGAAAGAGGGGGCTCACAGAATTGAAGGGAT...TACCCATGGCAACTGGTCTTCCACATATGATGAAATAGCCTCTGAGAGGTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp ACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAGATACAGGAGAGATGGAGATGCAGCTTGCGTaGAGGTCTTCATCCGTAAAG +
Preference number: 4 (lower is better)
Translates to: TRQPQLKGKEYCSDTGEMEMQLA*RSSSVK
Trigger: CTTTACGGATGAAGACCTGCACGCAAGCTGCATCTC...CATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp TATGTGGAAGACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACTAGTTGCTCGGCTTGACTaGTATACGTTTGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: YVEDQLPWVLRRVDTVQLVARLD*YTFGCN
Trigger: ATTGCAACCAAACGTATAGCAGTCAAGCCGAGCAAC...TAGTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CAGATACACACAGAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCACCTGTTCCCCCAAAATaGAGGTGCCAAGTCCACATC +
Preference number: 4 (lower is better)
Translates to: QIHTETRQPQLKGKEYCSPVPPK*RCQVHI
Trigger: GATGTGGACTTGGCACCTGCATTTTGGGGGAACAGG...TGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTCTGTGTGTATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTGATTCTGGCATAATTTaGTCTGATCTCCATCAGTTG +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGDSGII*SDLHQL
Trigger: CAACTGATGGAGATCAGAGCAAATTATGCCAGAATC...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp ACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAGATACAGGAGAGATGTCATCTGTCCCACTGTaGAAATGGAGTCACACGCTC +
Preference number: 4 (lower is better)
Translates to: TRQPQLKGKEYCSDTGEMSSVPL*KWSHTL
Trigger: GAGCGTGTGACTCCATTTGCACAGTGGGACAGATGA...CATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp ACTAGGGTGCTACAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATGTTCGAGGGCTTCCTTaGCGTCTGCCAAGAACACTC +
Preference number: 4 (lower is better)
Translates to: TRVLQTGSSSNRISFFKYVRGLP*RLPRTL
Trigger: GAGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAAC...ATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTGTAGCACCCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCTCAAATACCTTAAGCTaGAGGCCTCCTGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: KGLICNHDITSGKCTHSVSNTLS*RPPGTS
Trigger: GCTTGTCCCAGGAGGCCTGCAGCTTAAGGTATTTGA...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGCTCTTCTCCAAAAATTaGTACAGGTTTATGCACAGC +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGLFSKN*YRFMHS
Trigger: GCTGTGCATAAACCTGTAGCAATTTTTGGAGAAGAG...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCGAGAGGAGCAGTCTTaGAGCAGCTCTGAAATAGTT +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSREEQS*SSSEIV
Trigger: AACTATTTCAGAGCTGCTGCAAGACTGCTCCTCTCG...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACGAGGAATGGAACCCCTaGAAGCAATTGTTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDEEWNP*KQLFQS
Trigger: GGACTGAAACAATTGCTTCCAGGGGTTCCATTCCTC...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTCATGAAGGACAATATTaGGATCTACCTTGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SFLTSATVSSPVSSREPSHEGQY*DLPCSV
Trigger: TACAGAACAAGGTAGATCCCAATATTGTCCTTCATG...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCCCTTCTGGCATTAAATaGGTGTCTGAGGGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: KGLICNHDITSGKCTHSVPSGIK*VSEGSG
Trigger: GCCAGAACCCTCAGACACCCATTTAATGCCAGAAGG...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCATGTTTCCACTGGCCTaGCTTACTGGTTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSMFPLA*LTGSFM
Trigger: CATGAAGGAACCAGTAAGCCAGGCCAGTGGAAACAT...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGTACTGTAAAGATACATaGAGAGGCCATGATGGTACT +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGYCKDT*RGHDGT
Trigger: AGTACCATCATGGCCTCTCCATGTATCTTTACAGTA...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATGGTGCCCCCACAACCTaGCTTTCTCCCATCACCATG +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHGAPTT*LSPITM
Trigger: CATGGTGATGGGAGAAAGCCAGGTTGTGGGGGCACC...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACTCGCACAGGGGCATATaGCTCTGTTGTCTTACAGAT +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDSHRGI*LCCLTD
Trigger: ATCTGTAAGACAACAGAGCCATATGCCCCTGTGCGA...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp ACCACTTCCTGGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTAATCACTACCACTTCCTaGCAGTGGAAATTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: TTSWQWKFWVSDLTSQRLITTTS*QWKFWV
Trigger: CACCCAAAATTTCCACTGCCAGGAAGTGGTAGTGAT...TAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGAAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444572.6
3UTR CAA 72 bp CTCTCAGAGGCTATTTCATCATATGTGGAAGACCAGTaGCCATGGGTATTACGCCGGGTGGATACAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LSEAISSYVEDQ*PWVLRRVDTVQ
Trigger: TTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATATGATGAAATAGCCTCTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp ACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAGATACAGGAGAGATGCTGAGTCTTGGTGCCTaGAATACAGAGGAATGGAAC +
Preference number: 4 (lower is better)
Translates to: TRQPQLKGKEYCSDTGEMLSLGA*NTEEWN
Trigger: GTTCCATTCCTCTGTATTTCAGGCACCAAGACTCAG...CATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACAGTTTAATTTCCTGTTaGGTCTGTTCGGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDSLISC*VCSVQP
Trigger: AGGCTGGACCGAACAGACTCAACAGGAAATTAAACT...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGTGGCATAATTTGCTCTaGTCTCCATCAGTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGWHNLL*SPSVVL
Trigger: TAAAACAACTGATGGAGATCAGAGCAAATTATGCCA...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp TCCTGGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTATTTCATTACCTGGGAAGTGTGTaGCAAGCCTTCATTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SWQWKFWVSDLTSQRLFHYLGSV*QAFIRR
Trigger: TCTTCGAATGAAGGCTTGTCACACACTTCCCAGGTA...ATGAAATAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp TTCAGGAAAGCAGAGATAAAAGGGCTGTGTACCTGTAGTAAGAGAAGTATAGTGACCCCCAAGACTAGCTaGGGAGCAGCATGGCTTATA +
Preference number: 4 (lower is better)
Translates to: FRKAEIKGLCTCSKRSIVTPKTS*GAAWLI
Trigger: TATAAGCCATGCTGCTCCTCAGCTAGTCTTGGGGGT...CACTATACTTCTCTTACTACAGGTACACAGCCCTTTTATCTCTGCTTTCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CTTCTTGTTCTCCGGCATCCCTTCAATTCTGTGAGCCCCCTCTTTCGCTTCATGTTCTTTAATCACAGATaGTGTACAGACACCAGCATA +
Preference number: 4 (lower is better)
Translates to: LLVLRHPFNSVSPLFRFMFFNHR*CTDTSI
Trigger: TATGCTGGTGTCTGTACATCATCTGTGATTAAAGAA...CATGAAGCGAAAGAGGGGGCTCACAGAATTGAAGGGATGCCGGAGAACAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATGGTGTGTGGCTGCCATaGCACTGTGAGATGCAGCTT +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHGVWLP*HCEMQL
Trigger: AAGCTGCATCTCACAGTGGCATGGCAGCCACACACC...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTCAACCACCACGGGCTaGACAGGGCTCTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQSTTTG*TGLLVG
Trigger: TCCTACCAAGAGCCCTGTGCAGCCCGTGGTGGTTGA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACGATTTCAGAAAGGTGTaGCTCTGTATGTCTTATAAG +
Preference number: 4 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDDFRKV*LCMSYK
Trigger: CTTATAAGACATACAGAGGCACACCTTTCTGAAATC...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp TATTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTTGCCCCAGGCATAAGTaGCATCTTCAGGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: YYAGWIQFNYSMNIGLGGCPRHK*HLQVCL
Trigger: GAGGCAGACCTGAAGATGGCACTTATGCCTGGGGCA...ACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp GAAACCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGAACTGCTTCATGATTaGCTGTCGAAGTCTCAAATG +
Preference number: 4 (lower is better)
Translates to: ETMSHRHTDDHISLYVVPELLHD*LSKSQM
Trigger: CATTTGAGACTTCGACAGGCAATCATGAAGCAGTTC...TGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp GGGATACGTGAAGCACGAGTCATGAATCCGAATGCCTCTGGCATCCATGAAGTACAGCTTAGTTGGAAATaGAGAAATCACCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GIREARVMNPNASGIHEVQLSWK*RNHPSS
Trigger: AGAAGATGGGTGATTTCTGCATTTCCAACTAAGCTG...TACTTCATGGATGCCAGAGGCATTCGGATTCATGACTCGTGCTTCACGTATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTTGCTGGCACTTTCTTaGAGAACCTCTTCTGCTAAG +
Preference number: 4 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERLLALS*RTSSAK
Trigger: CTTAGCAGAAGAGGTTCTGCAAGAAAGTGCCAGCAA...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCGTCTATCTCCTTCCTTaGTCTGTCTGCATTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KGLICNHDITSGKCTHSVVYLLP*SVCIAS
Trigger: TGAGGCAATGCAGACAGAGCAAGGAAGGAGATAGAC...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTACCAGTTCATCTCTTTaGAGGTCTTTTAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGTSSSL*RSFKAN
Trigger: ATTTGCCTTAAAAGACCTGCAAAGAGATGAACTGGT...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp CTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGATTGCTACAGGTTTATaGACAGCAAGCTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLLLSLQYNPSTYKGCFRIATGL*TASLLP
Trigger: TGGAAGCAAGCTTGCTGTGCATAAACCTGTAGCAAT...CCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp ACTTCCTGGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTATTTTCATGTGAAGTTTCCTaGCAGGCATACCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TSWQWKFWVSDLTSQRLFSCEVS*QAYLGS
Trigger: ACTTCCCAGGTATGCCTGGCAGGAAACTTCACATGA...AAATAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCACACTCGTTTTGTGTTaGGCTGCTTATACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSTLVLC*AAYTGC
Trigger: GCAACCTGTATAAGCAGCCCAACACAAAACGAGTGT...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp CTGGCAGTTGCTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCTGCCTATTTGGCCATCTTaGAATGGAATCTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: LAVASDQGCWHFLAEPLLPIWPS*NGIWNF
Trigger: AAAATTCCAGATTCCATTCCAAGATGGCCAAATAGG...CAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCGTTCCTGATGAGCTGTaGTCCAGGCACCATGGTGAA +
Preference number: 4 (lower is better)
Translates to: NSIRIQKGLICNHDITSGVPDEL*SRHHGE
Trigger: TTCACCATGGTGCCTGGACCACAGCTCATCAGGAAC...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCTCAGACCAAGGTTGCTaGCACTTTCTTGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: KGLICNHDITSGKCTHSVSDQGC*HFLAEP
Trigger: AGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGA...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGATTTTCAGGCCCATTTaGACAATCAGCCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERIFRPI*TISPAD
Trigger: ATCAGCTGGGCTGATTGTCCAAATGGGCCTGAAAAT...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACAATGCATCAGGAATATaGGCCAAGACAAGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDNASGI*AKTRRV
Trigger: CACTCTTCTTGTCTTGGCTCATATTCCTGATGCATT...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp AGGCATGCATTAAAATGTGATAATAGCACACTTCTGGGATACGTGAAGCACGAGAAAGGGCTCTCCCGTTaGAACATAAACATCGGCTTC +
Preference number: 4 (lower is better)
Translates to: RHALKCDNSTLLGYVKHEKGLSR*NINIGF
Trigger: GAAGCCGATGTTTATGTTTCAACGGGAGAGCCCTTT...CTCGTGCTTCACGTATCCCAGAAGTGTGCTATTATCACATTTTAATGCATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR TCA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCTTCAATGTTCTCTCCTaGGCCTTCCCACGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: NSIRIQKGLICNHDITSGFNVLS*AFPRLL
Trigger: AAGGAGACGTGGGAAGGCTCAGGAGAGAACATTGAA...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp TATGTGGAAGACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACTAGTGCTGCAGAAGATTTaGATTTTGGCAATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: YVEDQLPWVLRRVDTVQLVLQKI*ILAMSD
Trigger: ATCAGACATTGCCAAAATTCAAATCTTCTGCAGCAC...TAGTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATGGGTTACTCACAAGGTaGAAGGTCCTGCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHGLLTR*KVLLSS
Trigger: GGAAGACAGCAGGACCTTTCACCTTGTGAGTAACCC...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp CAACTATTCAATGAATATAGGATTAGGTGGTTGTCCAAGGCTCCTTCAATGTTGGGGTTACTCACAAGGTaGAAGGTCCTGCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QLFNEYRIRWLSKAPSMLGLLTR*KVLLSS
Trigger: GGAAGACAGCAGGACCTTTCACCTTGTGAGTAACCC...CAACATTGAAGGAGCCTTGGACAACCACCTAATCCTATATTCATTGAATAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp TATTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTGTCTTGCAGCAGCTCTaGAATAGTTTTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: YYAGWIQFNYSMNIGLGGVLQQL*NSFAPG
Trigger: GCCTGGGGCAAAACTATTTCAGAGCTGCTGCAAGAC...ACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGAGGCTCCTTCAATGTTaGGATTTTCTTCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLLLSLQYNPSTYKGCFRRLLQC*DFLQLL
Trigger: AAGAAGCTGAAGAAAATCTCAACATTGAAGGAGCCT...CCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp GAAACCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCATTTTCCAACAGGAGCTaGATCTTGCTTTTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ETMSHRHTDDHISLYVVPFSNRS*ILLLFL
Trigger: GAGAAACAAAAGCAAGATGCAGCTCCTGTTGGAAAA...TGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGAATTTTTCTGCTTTCTaGAAAGCATTTGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGNFSAF*KAFGGR
Trigger: TCTACCTCCAAATGCTTTGCAGAAAGCAGAAAAATT...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TCTCCGGCATCCCTTCAATTCTGTGAGCCCCCTCTTTCGCTTCATGTAATCTCCAATTTTTCTGCTTTCTaGAAAGCATTTGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SPASLQFCEPPLSLHVISNFSAF*KAFGGR
Trigger: TCTACCTCCAAATGCTTTGCAGAAAGCAGAAAAATT...GGAGATTACATGAAGCGAAAGAGGGGGCTCACAGAATTGAAGGGATGCCGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCTGCCATCTTCAGGTCTaGCTCCATTTAGATAAATCC +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSCHLQV*LHLDKS
Trigger: GGATTTATCTAAATGGAGGCAGACCTGAAGATGGCA...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTGCCCCAGGCATAAGTaGCATCTTCAGGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQCPRHK*HLQVCL
Trigger: GAGGCAGACCTGAAGATGGCACTTATGCCTGGGGCA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGACTGGGGGTGTACAGTaGTCTAGCTGGGTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQTGGVQ*SSWVGH
Trigger: ATGACCCACCCAGCTAGAGCACTGTACACCCCCAGT...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TATGTGGAAGACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACTAGATTCTGGCATAATTTaGTCTGATCTCCATCAGTTG +
Preference number: 4 (lower is better)
Translates to: YVEDQLPWVLRRVDTVQLDSGII*SDLHQL
Trigger: CAACTGATGGAGATCAGAGCAAATTATGCCAGAATC...TAGTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp CAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTTTAAGTCCAGTAATCACGCTGGGAGCTaGAGGCTGGAGCTGTTCCTA +
Preference number: 4 (lower is better)
Translates to: QTGSSSNRISFFKYFKSSNHAGS*RLELFL
Trigger: TAGGAACAGCTCCAGCCTGCAGCTCCCAGCGTGATT...ACTGGACTTAAAATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACTATGCACAGCAAGCTTaGTTCCAGATACAATGTCAC +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDYAQQA*FQIQCH
Trigger: GTGACATTGTATCTGGAAGCAAGCTTGCTGTGCATA...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp AGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTTTAAGTCCAGTGCCCACTGTAATCTCATaGCCATCCTGCCCCATGCCA +
Preference number: 4 (lower is better)
Translates to: RLEVPPTGLASLNILSPVPTVIS*PSCPMP
Trigger: TGGCATGGGGCAGGATGGGCATGAGATTACAGTGGG...CACTGGACTTAAAATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp GCACGAGTCATGAATCCGAATGCCTCTGGCATCCATGAAGTATCACGTCTCAGAACGTCTCAGAGTCAGTaGTTTCCTTTTGAAATATCT +
Preference number: 4 (lower is better)
Translates to: ARVMNPNASGIHEVSRLRTSQSQ*FPFEIS
Trigger: AGATATTTCAAAAGGAAAGCACTGACTCTGAGACGT...TCTGAGACGTGATACTTCATGGATGCCAGAGGCATTCGGATTCATGACTCGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACTTGGGGTTCCATCTTTaGTATATACTTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDLGFHL*YILWRL
Trigger: CAGCCTCCAAAGTATATACCAAAGATGGAACCCCAA...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp ATAAAAGGGCTGTGTACCTGTAGTAAGAGAAGTATAGTGAAGTGGGTAGAGCGGACACTCGTTTTGTGTTaGGCTGCTTATACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: IKGLCTCSKRSIVKWVERTLVLC*AAYTGC
Trigger: GCAACCTGTATAAGCAGCCCAACACAAAACGAGTGT...CCGCTCTACCCACTTCACTATACTTCTCTTACTACAGGTACACAGCCCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp ACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAGATACAGGAGAGATGTTAGGGCAGACTAGGTaGAGAAGATCTCACAGGATA +
Preference number: 4 (lower is better)
Translates to: TRQPQLKGKEYCSDTGEMLGQTR*RRSHRI
Trigger: TATCCTGTGAGATCTTCTCCACCTAGTCTGCCCTAA...CATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGTCCCAGGACTGAATTaGCTCTCCACTGGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQVPGLN*LSTGGV
Trigger: TACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGAC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTGTATACAGATTTCACTaGCATACAAAATGTCTATGG +
Preference number: 4 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGVYRFH*HTKCLW
Trigger: CCATAGACATTTTGTATGCCAGTGAAATCTGTATAC...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATATCAGTGAGCCCTTGTaGGTAGAGCTCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHISEPL*VELCPK
Trigger: CTTGGGACAGAGCTCTACCCACAAGGGCTCACTGAT...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp GCACGAGTCATGAATCCGAATGCCTCTGGCATCCATGAAGTATCACGTCTCAGACATTTTCAGCTTAGTTaGAAATGCAGAAATCACCCA +
Preference number: 4 (lower is better)
Translates to: ARVMNPNASGIHEVSRLRHFQLS*KCRNHP
Trigger: TGGGTGATTTCTGCATTTCCAACTAAGCTGAAAATG...TCTGAGACGTGATACTTCATGGATGCCAGAGGCATTCGGATTCATGACTCGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CCA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTCTTCCTGTTCCTTATaGTGTTCCTTTGCCGTCATT +
Preference number: 4 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERSSCSL*CSFAVI
Trigger: AATGACGGCAAAGGAACACCATAAGGAACAGGAAGA...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGAACTCCACTTTCCAATaGAAACAGAGGCATGAAGGA +
Preference number: 4 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERNSTFQ*KQRHEG
Trigger: TCCTTCATGCCTCTGTTTCCATTGGAAAGTGGAGTT...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTTACCCCGTTATAGCTaGTGCCCCCACAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQLPRYS*CPHNLA
Trigger: AGCCAGGTTGTGGGGGCACCAGCTATAACGGGGTAA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATTGCCTGATCGGAGATTaGGACCTTGAACCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHCLIGD*DLEPPR
Trigger: TCTTGGGGGTTCAAGGTCCCAATCTCCGATCAGGCA...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406071.6
3UTR CAA 72 bp AATACTCTGCATACAAACCAATCCTTCAACCTACCATaGAGGGAGGATTCTGACAGCTCCCAAGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: NTLHTNQSFNLP*REDSDSSQVDV
Trigger: GACATCTACTTGGGAGCTGTCAGAATCCTCCCTCAATGGTAGGTTGAAGGATTGGTTTGTATGCAGAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCTTTCACCCAGTATTTTaGGTAAGGGATGAGTGGATT +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSFHPVF*VRDEWI
Trigger: AATCCACTCATCCCTTACTCAAAATACTGGGTGAAA...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR TCA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCGTCCTCGCAAAGGTGTaGTGGAATTTTGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: NSIRIQKGLICNHDITSGVLAKV*WNFAGI
Trigger: AATGCCTGCAAAATTCCATCACACCTTTGCGAGGAC...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTGTACATCTTAGCTCCTaGGGGGCTGAAACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIVHLSS*GAETFS
Trigger: GGAGAAGGTTTCAGCCCCTCAGGAGCTAAGATGTAC...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCATGGAAACAGAGGCATaGAGGACAATATTGGGATCT +
Preference number: 4 (lower is better)
Translates to: KGLICNHDITSGKCTHSVMETEA*RTILGS
Trigger: AGATCCCAATATTGTCCTTCATGCCTCTGTTTCCAT...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTTTTATGGCCCACCTCTaGGCAGAAGCCTTAGGATGT +
Preference number: 4 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFFMAHL*AEALGC
Trigger: ACATCCTAAGGCTTCTGCTCAGAGGTGGGCCATAAA...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCAAAGTGAGGACAGCATaGAATCAGTTCTCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: KGLICNHDITSGKCTHSVKVRTA*NQFSKQ
Trigger: CTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTT...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATCATTCTGCAAAACTCTaGGTCGCACAGGGGCATATG +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHHSAKL*VAQGHM
Trigger: CATATGCCCCTGTGCGACTCAGAGTTTTGCAGAATG...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCGTGCTGCAGAAGATTTaGATTTTGGCAATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSVLQKI*ILAMSD
Trigger: ATCAGACATTGCCAAAATTCAAATCTTCTGCAGCAC...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCTTTACTATGCTTTGGTaGACAGCTGTGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSFTMLW*TAVFLL
Trigger: CAGAAGAAACACAGCTGTTCACCAAAGCATAGTAAA...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp CAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTTTAAGTCCAGTGTGAAGCACGAGTCATaGATCCGAATGCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QTGSSSNRISFFKYFKSSVKHES*IRMPLA
Trigger: TGCCAGAGGCATTCGGATTCATGACTCGTGCTTCAC...ACTGGACTTAAAATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGCATGCCACTGTGAGATaGAGCTTGCGTGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQHATVR*SLRAGL
Trigger: AAGACCTGCACGCAAGCTGCATCTCACAGTGGCATG...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCTTTTCCAACAGGAGCTaGATCTTGCTTTTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSFSNRS*ILLLFL
Trigger: GAGAAACAAAAGCAAGATGCAGCTCCTGTTGGAAAA...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACAATCAACTTGAGAACTaGTTCATGATTGCCTGTCGA +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDNQLEN*FMIACR
Trigger: TCGACAGGCAATCATGAAGCAGTTCTCAAGTTGATT...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp CATCCAACACAAAAGTTTAGGGATCTCAATCATTTGATGCACAACATCATAGAAGGCTTCCTTGCCGTCTaGCAAGAACACTCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: HPTQKFRDLNHLMHNIIEGFLAV*QEHSSC
Trigger: GCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCC...TTCTATGATGTTGTGCATCAAATGATTGAGATCCCTAAACTTTTGTGTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTCAGGAGATTGAGGCTTaGCTGGGCAACATAGTGAGA +
Preference number: 4 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFQEIEA*LGNIVR
Trigger: TCTCACTATGTTGCCCAGGCAAGCCTCAATCTCCTG...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTGAGGAGAATTGCTCCTaGTCAGCCTGTAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIEENCS*SACNWG
Trigger: CCCCCAATTACAGGCTGAGCAGGAGCAATTCTCCTC...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCTGCTGCTTGCTTCACTaGCTGAGAAACTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: NSIRIQKGLICNHDITSGCCLLH*LRNSTF
Trigger: GAAAGTGGAGTTTCTCAGGCAGTGAAGCAAGCAGCA...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp GACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACTATTCAATGAACTCTTCTCCAAAAATTaGTACAGGTTTATGCACAGC +
Preference number: 4 (lower is better)
Translates to: DQLPWVLRRVDTVQLFNELFSKN*YRFMHS
Trigger: GCTGTGCATAAACCTGTAGCAATTTTTGGAGAAGAG...TTCATTGAATAGTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp TTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTTGGAGGAATGGAACCCCTaGAAGCAATTGTTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRRVDTVQLFNEYRIRWLEEWNP*KQLFQS
Trigger: GGACTGAAACAATTGCTTCCAGGGGTTCCATTCCTC...CAACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp TTCAGGAAAGCAGAGATAAAAGGGCTGTGTACCTGTAGTAAGAGAAGTATAGTGCTTTGGTATATACTTTaGAGGCTGCTCTGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: FRKAEIKGLCTCSKRSIVLWYIL*RLLWQA
Trigger: GGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAG...CACTATACTTCTCTTACTACAGGTACACAGCCCTTTTATCTCTGCTTTCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp AGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACTTGGGGTTCCATCTTTaGTATATACTTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SFHFISSIAAEPSVQSFHLGFHL*YILWRL
Trigger: CAGCCTCCAAAGTATATACCAAAGATGGAACCCCAA...GTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCAGCGATGGAAATAATTaGCCTTCTTGTCACAGTCTT +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSSDGNN*PSCHSL
Trigger: AAGACTGTGACAAGAAGGCCAATTATTTCCATCGCT...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp AGGGCAAGGCATGCATTAAAATGTGATAATAGCACACTTCTGGGATACGTGAAGCAGCAAGGTGATGGTTaGTACAGTAACTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RARHALKCDNSTLLGYVKQQGDG*YSNSGK
Trigger: TTTGCCAGAGTTACTGTACCAACCATCACCTTGCTG...CTTCACGTATCCCAGAAGTGTGCTATTATCACATTTTAATGCATGCCTTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCGACAAGCGTGTTTGCTaGAAGGCTTTTAATGTGTTG +
Preference number: 4 (lower is better)
Translates to: KGLICNHDITSGKCTHSVDKRVC*KAFNVL
Trigger: CAACACATTAAAAGCCTTCCAGCAAACACGCTTGTC...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACGAATATAGGATTAGGTaGTTGTCCAAGGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SFHFISSIAAEPSVQSFHEYRIR*LSKAPS
Trigger: TGAAGGAGCCTTGGACAACCACCTAATCCTATATTC...GTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCATCATGGCTGTGATCTaGTGCTGTTTGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: NSIRIQKGLICNHDITSGIMAVI*CCLMCG
Trigger: TCCACACATCAAACAGCATCAGATCACAGCCATGAT...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGGCCTTTGATGAATCTTaGGAAGTAATCTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERAFDES*EVIFPS
Trigger: TGATGGAAAGATTACTTCTCAAGATTCATCAAAGGC...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp CAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTTTAAGTCCAGTCACTTCTGGGATACGTaGAGCACGAGTCATGAATCC +
Preference number: 4 (lower is better)
Translates to: QTGSSSNRISFFKYFKSSHFWDT*STSHES
Trigger: GGATTCATGACTCGTGCTTCACGTATCCCAGAAGTG...ACTGGACTTAAAATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp AGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACTTTTCCAACAGGAGCTaGATCTTGCTTTTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SFHFISSIAAEPSVQSFHFSNRS*ILLLFL
Trigger: GAGAAACAAAAGCAAGATGCAGCTCCTGTTGGAAAA...GTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCGATTTCAGAAAGGTGTaGCTCTGTATGTCTTATAAG +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSDFRKV*LCMSYK
Trigger: CTTATAAGACATACAGAGGCACACCTTTCTGAAATC...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGATGCAGCCCTACTCCTaGCAAATACCATCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQMQPYS*QIPSSQ
Trigger: CTGACTGGATGGTATTTGGCAGGAGTAGGGCTGCAT...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCATAGATCTGTTTAGATaGTACAACTCACAACAAGGC +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSIDLFR*YNSQQG
Trigger: GCCTTGTTGTGAGTTGTAGCATCTAAACAGATCTAT...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp TTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTTGTTAATTGTGGAGATGTaGCAGAGACAGCAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: LRRVDTVQLFNEYRIRWLLIVEM*QRQQLR
Trigger: ACGAAGCTGCTGTCTCTGGCACATCTCCACAATTAA...CAACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGCTGAGACAGGAGAATTaGTTGAACCTGGGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQLRQEN*LNLGRG
Trigger: TCCCCTTCCCAGGTTCAAGCAATTCTCCTGTCTCAG...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp ACTAGGGTGCTACAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTATTCCCATCCAAAGTaGCTTCAGGGCTACTTTGCT +
Preference number: 4 (lower is better)
Translates to: TRVLQTGSSSNRISFFKYYSHPK*LQGYFA
Trigger: AGCAAAGTAGCCCTGAAGGCACTTTGGATGGGAATA...ATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTGTAGCACCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp GATAACTTTCACATAAAACTTGACCTTTCCCAAGTTGAAGTTCAGAAAACCATCGATACTGCTGCTGAATaGACGAGTCTGTTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: DNFHIKLDLSQVEVQKTIDTAAE*TSLLGP
Trigger: TGGCCCCAACAGACTCGTGCATTCAGCAGCAGTATC...GATGGTTTTCTGAACTTCAACTTGGGAAAGGTCAAGTTTTATGTGAAAGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp TTGCACAGGCTAATTTCAGCTGGCATAAGCTTTTATAAGGATGCAAAAACAGAGCAAGAACACTCGTCTTaGGGCCATGTTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: LHRLISAGISFYKDAKTEQEHSS*GHVQIQ
Trigger: CTGAATCTGAACATGGCCGCAAGACGAGTGTTCTTG...CTCTGTTTTTGCATCCTTATAAAAGCTTATGCCAGCTGAAATTAGCCTGTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCTGGGACAAGCGTGTTTaGTGGAAGGCTTTTAATGTG +
Preference number: 4 (lower is better)
Translates to: NSIRIQKGLICNHDITSGWDKRV*WKAFNV
Trigger: CACATTAAAAGCCTTCCAGCAAACACGCTTGTCCCA...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCTCCGGTTCTGTAACTTaGTTCTCTTCTCCAAAAATT +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSSGSVT*FSSPKI
Trigger: AATTTTTGGAGAAGAGAAGCAAGTTACAGAACCGGA...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATTCATGTGAAGTTTCCTaGCAGGCATACCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHSCEVS*QAYLGS
Trigger: ACTTCCCAGGTATGCCTGGCAGGAAACTTCACATGA...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCTTGTGCAATTTACTATaGTTTGGTGAACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSLCNLL*FGEQLC
Trigger: ACACAGCTGTTCACCAAAGCATAGTAAATTGCACAA...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp CAACTATTCAATGAATATAGGATTAGGTGGTTGTCCAAGGCTCCTTCAATGTTGCCTTATCCAAGGCAGTaGTATGAAAGGCCACAAGTG +
Preference number: 4 (lower is better)
Translates to: QLFNEYRIRWLSKAPSMLPYPRQ*YERPQV
Trigger: CACTTGTGGCCTTTCATAGCACTGCCTTGGATAAGG...CAACATTGAAGGAGCCTTGGACAACCACCTAATCCTATATTCATTGAATAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp TATTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTCGAGAGGAGCAGTCTTaGAGCAGCTCTGAAATAGTT +
Preference number: 4 (lower is better)
Translates to: YYAGWIQFNYSMNIGLGGREEQS*SSSEIV
Trigger: AACTATTTCAGAGCTGCTGCAAGACTGCTCCTCTCG...ACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATCTTTGGTATATACTTTaGAGGCTGCTCTGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHLWYIL*RLLWQA
Trigger: GGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAG...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp GCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGAAAGCAGATCATTTTGTGTCTCATaGTATCTAGATCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: AEPSVQSFHLQRLLQESRSFCVS*YLDQPK
Trigger: TTTTGGCTGATCTAGATACCATGAGACACAAAATGA...TCTGCTTTCCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTAATGCACGAGTCTGTTaGGGCCAAACTGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSINARVC*GQTETA
Trigger: TGCAGTCTCAGTTTGGCCCCAACAGACTCGTGCATT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCTTGTTCTGTCTGGCATaGCCCGTCCAAATGGATATA +
Preference number: 4 (lower is better)
Translates to: NSIRIQKGLICNHDITSGLFCLA*PVQMDI
Trigger: TATATCCATTTGGACGGGCCATGCCAGACAGAACAA...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATAGATGGGTTTCTTCATaGGAGGACTGCTCGGAACAA +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHRWVSS*EDCSEQ
Trigger: TTGTTCCGAGCAGTCCTCCCATGAAGAAACCCATCT...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
3UTR CAA 72 bp CTCCAAGTCCACCTTTTCAAACTGGTCAGGTATCTGTaGACTGGTACAGTTGAAATTAATTGGAAATCCCTC +
Preference number: 4 (lower is better)
Translates to: LQVHLFKLVRYL*TGTVEINWKSL
Trigger: GAGGGATTTCCAATTAATTTCAACTGTACCAGTCAACAGATACCTGACCAGTTTGAAAAGGTGGACTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATTGTAAGAAGGGCTTCTaGGTCTTGGTGCCTGAAATA +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHCKKGF*VLVPEI
Trigger: TATTTCAGGCACCAAGACTCAGAAGCCCTTCTTACA...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp ACTAGGGTGCTACAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATGATAGTGCTTCTCTGTaGTCTTCTGCTCCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: TRVLQTGSSSNRISFFKYDSASL*SSAPVF
Trigger: AAAAACAGGAGCAGAAGATCACAGAGAAGCACTATC...ATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTGTAGCACCCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR TCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTAAAGGGCTCTCCCGTTaGAACATAAACATCGGCTTC +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIKGLSR*NINIGF
Trigger: GAAGCCGATGTTTATGTTTCAACGGGAGAGCCCTTT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATCCAGAGTTCTCCACATaGAACATACACCAGTTCATC +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHPEFST*NIHQFI
Trigger: GATGAACTGGTGTATGTTTCATGTGGAGAACTCTGG...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTCCAAGGCAGTGCTATaGAAGGCCACAAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQSKAVL*KATSAF
Trigger: AAAAGCACTTGTGGCCTTTCATAGCACTGCCTTGGA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp CATCCAACACAAAAGTTTAGGGATCTCAATCATTTGATGCACAACATCATAGAATGCCTCTGGCATCCATaGAGTATCACGTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: HPTQKFRDLNHLMHNIIECLWHP*SITSQS
Trigger: ACTCTGAGACGTGATACTTCATGGATGCCAGAGGCA...TTCTATGATGTTGTGCATCAAATGATTGAGATCCCTAAACTTTTGTGTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp CAACTATTCAATGAATATAGGATTAGGTGGTTGTCCAAGGCTCCTTCAATGTTGGCTTCTGAGTCTTGGTaGCTGAAATACAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: QLFNEYRIRWLSKAPSMLASESW*LKYRGM
Trigger: CATTCCTCTGTATTTCAGGCACCAAGACTCAGAAGC...CAACATTGAAGGAGCCTTGGACAACCACCTAATCCTATATTCATTGAATAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACAATTTTTCTGCTTTCTaGAAAGCATTTGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDNFSAF*KAFGGR
Trigger: TCTACCTCCAAATGCTTTGCAGAAAGCAGAAAAATT...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp CAGATACACACAGAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAAAAGGAAAGGAGTATTaGTCAGATACAGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: QIHTETRQPQLKGKEYCSKGKEY*SDTGEM
Trigger: CATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTT...TGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTCTGTGTGTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp TACAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTTTAAGTCCAGATTCAGCTTTTCTGTaGACTCCTCCAGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: YRLEVPPTGLASLNILSPDSAFL*TPPAAR
Trigger: CCTTGCTGCTGGAGGAGTGCACAGAAAAGCTGAATC...TGGACTTAAAATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCATTCATCAATCAGCCTaGTCACTTCTTCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: NSIRIQKGLICNHDITSGIHQSA*SLLPVP
Trigger: AGGAACAGGAAGAAGTGAGCAGGCTGATTGATGAAT...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTCTTCCTTGCTCTGTCTaGATTGCCTCATTAAGTTGG +
Preference number: 4 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFLPCSV*IASLSW
Trigger: CCAACTTAATGAGGCAATGCAGACAGAGCAAGGAAG...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGACTCCAAGCTAGGCTaGAGCAAGTTCTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQDSKLG*SKFSER
Trigger: TCTTTCTGAGAACTTGCTGCAGCCTAGCTTGGAGTC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp TTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTTGTATGCACAGCAAGCTTaGTTCCAGATACAATGTCAC +
Preference number: 4 (lower is better)
Translates to: LRRVDTVQLFNEYRIRWLYAQQA*FQIQCH
Trigger: GTGACATTGTATCTGGAAGCAAGCTTGCTGTGCATA...CAACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp AGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACTCCGGTTCTGTAACTTaGTTCTCTTCTCCAAAAATT +
Preference number: 4 (lower is better)
Translates to: SFHFISSIAAEPSVQSFHSGSVT*FSSPKI
Trigger: AATTTTTGGAGAAGAGAAGCAAGTTACAGAACCGGA...GTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp ACTTCCTGGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTATTTTTGTGCAATTTACTATaGTTTGGTGAACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSWQWKFWVSDLTSQRLFLCNLL*FGEQLC
Trigger: ACACAGCTGTTCACCAAAGCATAGTAAATTGCACAA...AAATAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR GCA 90 bp TCCTGGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTATTTCATATGATAGATTTCTGTTaGTTGCAACCAAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: SWQWKFWVSDLTSQRLFHMIDFC*LQPRTQ
Trigger: CTGAGTTCTTGGTTGCAAGCAACAGAAATCTATCAT...ATGAAATAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGCTTTGGTATATACTTTaGAGGCTGCTCTGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQLWYIL*RLLWQA
Trigger: GGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAG...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATACACTCGTTTTGTGTTaGGCTGCTTATACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHTLVLC*AAYTGC
Trigger: GCAACCTGTATAAGCAGCCCAACACAAAACGAGTGT...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCCATTTTCAGCTTAGTTaGAAATGCAGAAATCACCCA +
Preference number: 4 (lower is better)
Translates to: KGLICNHDITSGKCTHSVHFQLS*KCRNHP
Trigger: TGGGTGATTTCTGCATTTCCAACTAAGCTGAAAATG...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTTTCCTTCATGTTTTATaGCCCACCTCTGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFFLHVL*PTSEQK
Trigger: CTTCTGCTCAGAGGTGGGCCATAAAACATGAAGGAA...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACGAGATAACAGTATCCTaGTTGATCAATGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDEITVS*LINVFF
Trigger: GAAGAAAACATTGATCAACCAGGATACTGTTATCTC...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGAGTTTAATTTCCTGTTaGGTCTGTTCGGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQSLISC*VCSVQP
Trigger: AGGCTGGACCGAACAGACTCAACAGGAAATTAAACT...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp CAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTTTAAGTCCAGTATCATGGCTGTGATCTaGTGCTGTTTGATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QTGSSSNRISFFKYFKSSIMAVI*CCLMCG
Trigger: TCCACACATCAAACAGCATCAGATCACAGCCATGAT...ACTGGACTTAAAATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR TCA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTATCAAAAAGCCGCATTaGAGAATAATTGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFIKKPH*RIIEAW
Trigger: CCAGGCCTCAATTATTCTTCAATGCGGCTTTTTGAT...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATATTTGTTTCTTTTGCTaGGCAATGGACAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHICFFC*AMDRSG
Trigger: TCCTGACCTGTCCATTGCTCAGCAAAAGAAACAAAT...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGCCTTCATTCGAAGATaGGCTCTTACGTGTGAATCT +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQAFIRR*ALTCES
Trigger: AGATTCACACGTAAGAGCTCATCTTCGAATGAAGGC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR TCA 90 bp TTGCACAGGCTAATTTCAGCTGGCATAAGCTTTTATAAGGATGCAAAAACAGAGAAACCTAATGTTAAGTaGCTAGGGTGCTACAGACTG +
Preference number: 4 (lower is better)
Translates to: LHRLISAGISFYKDAKTEKPNVK*LGCYRL
Trigger: CAGTCTGTAGCACCCTAGTCACTTAACATTAGGTTT...CTCTGTTTTTGCATCCTTATAAAAGCTTATGCCAGCTGAAATTAGCCTGTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGCTTCTGAGTCTTGGTaGCTGAAATACAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQASESW*LKYRGM
Trigger: CATTCCTCTGTATTTCAGGCACCAAGACTCAGAAGC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGTTGCTCGGCTTGACTaGTATACGTTTGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQVARLD*YTFGCN
Trigger: ATTGCAACCAAACGTATAGCAGTCAAGCCGAGCAAC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATTGCCATCTTCAGGTCTaGCTCCATTTAGATAAATCC +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHCHLQV*LHLDKS
Trigger: GGATTTATCTAAATGGAGGCAGACCTGAAGATGGCA...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTTAATTGTGGAGATGTaGCAGAGACAGCAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQLIVEM*QRQQLR
Trigger: ACGAAGCTGCTGTCTCTGGCACATCTCCACAATTAA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTCACAAACTTCCCAATTaGCACATCCAGGTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIHKLPN*HIQVAE
Trigger: TTCTGCTACCTGGATGTGGCAATTGGGAAGTTTGTG...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATATTGCTACAGGTTTATaGACAGCAAGCTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHIATGL*TASLLP
Trigger: TGGAAGCAAGCTTGCTGTGCATAAACCTGTAGCAAT...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp GATAACTTTCACATAAAACTTGACCTTTCCCAAGTTGAAGTTCAGAAAACCATCATCTCATGCCCATCCTaGCCCATGCCATTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: DNFHIKLDLSQVEVQKTIISCPS*PMPFLK
Trigger: CTTTAAGAATGGCATGGGGCAGGATGGGCATGAGAT...GATGGTTTTCTGAACTTCAACTTGGGAAAGGTCAAGTTTTATGTGAAAGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CCA 90 bp TTGCACAGGCTAATTTCAGCTGGCATAAGCTTTTATAAGGATGCAAAAACAGAGATGCTGTTTGATGTGTaGAGCAATCTTGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LHRLISAGISFYKDAKTEMLFDV*SNLEVL
Trigger: CAGGACTTCAAGATTGCTCCACACATCAAACAGCAT...CTCTGTTTTTGCATCCTTATAAAAGCTTATGCCAGCTGAAATTAGCCTGTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTATAATTGAGGCCTGGTaGGTTGATGGAAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIIIEAW*VDGRTL
Trigger: CAAGGTTCTTCCATCAACCCACCAGGCCTCAATTAT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTACTGGCCTGGCTTACTaGTTCCTTCATGTTTTATGG +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSITGLAY*FLHVLW
Trigger: CCATAAAACATGAAGGAACCAGTAAGCCAGGCCAGT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGCTGTTGTCTTACAGATaGGTTTCTTCATGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQLLSYR*VSSWED
Trigger: GTCCTCCCATGAAGAAACCCATCTGTAAGACAACAG...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406071.6
3UTR CAA 72 bp GAAAGGAAATTCTATAAAGCAGATCCTCTATTCCCATaGTACTGTTGTAATTTTGGTTTGCGGCTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: ERKFYKADPLFP*YCCNFGLRLRP
Trigger: TGGCCTGAGCCGCAAACCAAAATTACAACAGTACAATGGGAATAGAGGATCTGCTTTATAGAATTTCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATATTTGGAAAGTTCTGTaGCAAACATCCACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHIWKVL*QTSTVL
Trigger: CAGAACTGTGGATGTTTGTCACAGAACTTTCCAAAT...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp TTGCACAGGCTAATTTCAGCTGGCATAAGCTTTTATAAGGATGCAAAAACAGAGCAATTCCGGGCTGACTaGAATTTTAAAGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LHRLISAGISFYKDAKTEQFRAD*NFKEEN
Trigger: GTTCTCTTCTTTAAAATTTCAGTCAGCCCGGAATTG...CTCTGTTTTTGCATCCTTATAAAAGCTTATGCCAGCTGAAATTAGCCTGTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR TCA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTCTGAGGATAAGCCTTTaGATAAATGCAACCATCAGT +
Preference number: 4 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFLRISL*INATIS
Trigger: ACTGATGGTTGCATTTATTCAAAGGCTTATCCTCAG...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp TACAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTTTAAGTCCAGAACAGAATTCGGACTaGGGTCCTCTCAGTAAGTTT +
Preference number: 4 (lower is better)
Translates to: YRLEVPPTGLASLNILSPEQNSD*GPLSKF
Trigger: AAACTTACTGAGAGGACCTCAGTCCGAATTCTGTTC...TGGACTTAAAATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGCTTGCATCTGGCAAATaGATCAGGAATATGAGCCAA +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQLASGK*IRNMSQ
Trigger: TTGGCTCATATTCCTGATGCATTTGCCAGATGCAAG...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGAACTGCTTCATGATTaGCTGTCGAAGTCTCAAATG +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQELLHD*LSKSQM
Trigger: CATTTGAGACTTCGACAGGCAATCATGAAGCAGTTC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR GCA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTCAGCTTAGTTGGAAATaGAGAAATCACCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFQLSWK*RNHPSS
Trigger: AGAAGATGGGTGATTTCTGCATTTCCAACTAAGCTG...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATGGATCTTCTTGCATTTaGTTTTCTTCCGGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHGSSCI*FSSGSV
Trigger: TACAGAACCGGAAGAAAAGCAAATGCAAGAAGATCC...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGCATGGCTTATAATCTaGCCATCTCTGTATTCGAAC +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQAWLII*PSLYSN
Trigger: GTTCGAATACAGAGATGGGCAGATTATAAGCCATGC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTTGGGGTTCCATCTTTaGTATATACTTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQLGFHL*YILWRL
Trigger: CAGCCTCCAAAGTATATACCAAAGATGGAACCCCAA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp CAGATACACACAGAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCATCATTTTGTGTCTCATaGTATCTAGATCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: QIHTETRQPQLKGKEYCSSFCVS*YLDQPK
Trigger: TTTTGGCTGATCTAGATACCATGAGACACAAAATGA...TGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTCTGTGTGTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CCA 90 bp CAGATACACACAGAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAAAACCTATACATTATTaGTGTTACTGGAGAGGAATC +
Preference number: 4 (lower is better)
Translates to: QIHTETRQPQLKGKEYCSKPIHY*CYWRGI
Trigger: GATTCCTCTCCAGTAACACCAATAATGTATAGGTTT...TGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTCTGTGTGTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTGCAGACTTTAATCGTTaGTACAGGGCCAAAAGAACT +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIADFNR*YRAKRT
Trigger: AGTTCTTTTGGCCCTGTACCAACGATTAAAGTCTGC...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp TTCAGGAAAGCAGAGATAAAAGGGCTGTGTACCTGTAGTAAGAGAAGTATAGTGTTTTTCCGTTTTCTTTaGAAGACTGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: FRKAEIKGLCTCSKRSIVFFRFL*KTVILI
Trigger: GATGAGGATGACAGTCTTCCAAAGAAAACGGAAAAA...CACTATACTTCTCTTACTACAGGTACACAGCCCTTTTATCTCTGCTTTCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATTGGCATAATTTGCTCTaGTCTCCATCAGTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHWHNLL*SPSVVL
Trigger: TAAAACAACTGATGGAGATCAGAGCAAATTATGCCA...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR TCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTCAATTCCGGGCTGACTaGAATTTTAAAGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIQFRAD*NFKEEN
Trigger: GTTCTCTTCTTTAAAATTTCAGTCAGCCCGGAATTG...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR TCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTTGGTCAGGTATCTGTTaGCTGGTACAGTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIWSGIC*LVQLKL
Trigger: TAATTTCAACTGTACCAGTCAACAGATACCTGACCA...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR GCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTTCTCAGAAAGAAATTaGCTTCCAAGTATTACCCCG +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQFSERN*LPSITP
Trigger: CGGGGTAATACTTGGAAGGCAATTTCTTTCTGAGAA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGAGCGATGGAAATAATTaGCCTTCTTGTCACAGTCTT +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQSDGNN*PSCHSL
Trigger: AAGACTGTGACAAGAAGGCCAATTATTTCCATCGCT...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp TTGCACAGGCTAATTTCAGCTGGCATAAGCTTTTATAAGGATGCAAAAACAGAGATAACTGCTTTTGCCTaGGATGACATAAACTCTCTT +
Preference number: 4 (lower is better)
Translates to: LHRLISAGISFYKDAKTEITAFA*DDINSL
Trigger: AAGAGAGTTTATGTCATCCCAGGCAAAAGCAGTTAT...CTCTGTTTTTGCATCCTTATAAAAGCTTATGCCAGCTGAAATTAGCCTGTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CCA 90 bp TTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTTGGAGATAACAGTATCCTaGTTGATCAATGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRRVDTVQLFNEYRIRWLEITVS*LINVFF
Trigger: GAAGAAAACATTGATCAACCAGGATACTGTTATCTC...CAACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR TCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTTCTTTAATCACAGATaGTGTACAGACACCAGCATA +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQFFNHR*CTDTSI
Trigger: TATGCTGGTGTCTGTACATCATCTGTGATTAAAGAA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR GCA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTCAAAAAGGTCTTATATaGAACCATGATATCACCTCT +
Preference number: 4 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFQKGLI*NHDITS
Trigger: AGAGGTGATATCATGGTTGCATATAAGACCTTTTTG...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATTCATTTTGTGTCTCATaGTATCTAGATCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHSFCVS*YLDQPK
Trigger: TTTTGGCTGATCTAGATACCATGAGACACAAAATGA...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTATAACTGCTTTTGCCTaGGATGACATAAACTCTCTT +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIITAFA*DDINSL
Trigger: AAGAGAGTTTATGTCATCCCAGGCAAAAGCAGTTAT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTATTCTTCAGCGAAAGTaGATTCTTAATTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIILQRK*ILNFLA
Trigger: GGCCAAGAAATTAAGAATCCACTTTCGCTGAAGAAT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CCA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTTTTTCCGTTTTCTTTaGAAGACTGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQFFRFL*KTVILI
Trigger: GATGAGGATGACAGTCTTCCAAAGAAAACGGAAAAA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CCA 90 bp GATAACTTTCACATAAAACTTGACCTTTCCCAAGTTGAAGTTCAGAAAACCATCCCTATTTGGCCATCTTaGAATGGAATCTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: DNFHIKLDLSQVEVQKTIPIWPS*NGIWNF
Trigger: AAAATTCCAGATTCCATTCCAAGATGGCCAAATAGG...GATGGTTTTCTGAACTTCAACTTGGGAAAGGTCAAGTTTTATGTGAAAGTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452803.1
3UTR CAA 72 bp AGATCTGTATGCTCTACCATAAGAGACCCAAATTTTTaGCTCATTCTTCAGCGAAAGTGGATTCTTAATTTC +
Preference number: 4 (lower is better)
Translates to: RSVCSTIRDPNF*LILQRKWILNF
Trigger: GAAATTAAGAATCCACTTTCGCTGAAGAATGAGCAAAAAATTTGGGTCTCTTATGGTAGAGCATACAGATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
3UTR CAA 72 bp ACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTaGTCCAAGGCTCCTTCAATGTTGAGATTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TVQLFNEYRIRW*SKAPSMLRFSS
Trigger: TGAAGAAAATCTCAACATTGAAGGAGCCTTGGACAACCACCTAATCCTATATTCATTGAATAGTTGAACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp TGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATCCCATCACTCGTCCCAGGACTGAATaGGCTCTCCACTGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: WVERKLWSQGHPGLNPITRPRTE*ALHWGC
Trigger: ACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGACG...AGTGATGGGATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp AGTGAAGTGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATCCCACAATGTCTGTGGCTaGAGGGCCCTGCTGCCTTCG +
Preference number: 5 (lower is better)
Translates to: SEVGRAEALVSGPPRFESHNVCG*RALLPS
Trigger: CGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTG...GGATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCACTTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGACTGTGAGATGCAGCTaGCGTGCAGGTCTTCATCCG +
Preference number: 5 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWTVRCS*RAGLHP
Trigger: CGGATGAAGACCTGCACGCAAGCTGCATCTCACAGT...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp TGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATCCCATCACTGCTGGGTGGGTCATTTaGAGACGAGAGGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: WVERKLWSQGHPGLNPITAGWVI*RREEQS
Trigger: AGACTGCTCCTCTCGTCTCAAAATGACCCACCCAGC...AGTGATGGGATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATACGAGAGGAGCAGTCTaGCAGCAGCTGCCTGTATGG +
Preference number: 5 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNTRGAV*QQLPVW
Trigger: CCATACAGGCAGCTGCTGCAAGACTGCTCCTCTCGT...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACCACAATGTCTGTGGCTaGAGGGCCCTGCTGCCTTCG +
Preference number: 5 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDHNVCG*RALLPS
Trigger: CGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTG...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAGGTTCGAGGGCTTCCTaGCCGTCTGCCAAGAACACT +
Preference number: 5 (lower is better)
Translates to: SSSFLTSATVSSPVSSREGSRAS*PSAKNT
Trigger: AGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAACC...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS GCA 90 bp TTCAGGTTCGAGGGCTTCCTTGCCGTCTGCCAAGAACACTCGTCTTaGGGCCATGTTCAGATTCAGCTTTTCTGTGCACTCCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: FRFEGFLAVCQEHSS*GHVQIQLFCALLQQ
Trigger: CTGCTGGAGGAGTGCACAGAAAAGCTGAATCTGAACATGGCCGCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAACCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS-3UTR CAA 90 bp CATATGTGGAAGACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACGGCTGCACAGGGCTCTaGGTAGGAACCATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: HMWKTSCHGYYAGWIQFNGCTGL*VGTMVA
Trigger: AGCCACCATGGTTCCTACCAAGAGCCCTGTGCAGCC...GTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp CCCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGGCCACACTGATGACCTaGAAGGGCCCTTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: PRDSALPSFHFISSIAAEATLMT*KGPCKK
Trigger: CTTCTTACAAGGGCCCTTCAAGGTCATCAGTGTGGC...CTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTACTGTGAGATGCAGCTaGCGTGCAGGTCTTCATCCG +
Preference number: 5 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGTVRCS*RAGLHP
Trigger: CGGATGAAGACCTGCACGCAAGCTGCATCTCACAGT...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CTTCTTGTTCTCCGGCATCCCTTCAATTCTGTGAGCCCCCTCTTTCGCTTCATGACTGTGAGATGCAGCTaGCGTGCAGGTCTTCATCCG +
Preference number: 5 (lower is better)
Translates to: LLVLRHPFNSVSPLFRFMTVRCS*RAGLHP
Trigger: CGGATGAAGACCTGCACGCAAGCTGCATCTCACAGT...CATGAAGCGAAAGAGGGGGCTCACAGAATTGAAGGGATGCCGGAGAACAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGCTGGGTGGGTCATTTaGAGACGAGAGGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGAGWVI*RREEQS
Trigger: AGACTGCTCCTCTCGTCTCAAAATGACCCACCCAGC...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTCATGTCCCCATCATGTaGCTGTGGGGTGGGACTGAT +
Preference number: 5 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGHVPIM*LWGGTD
Trigger: ATCAGTCCCACCCCACAGCAACATGATGGGGACATG...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTGAACTAACAGGAGAATaGGAGTCTCACTCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPAELTGE*ESHSGC
Trigger: ACACCCTGAGTGAGACTCCAATTCTCCTGTTAGTTC...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS GCA 90 bp CCTTCTGGTGTGTGGCTGCCATGCCACTGTGAGATGCAGCTTGCGTaGAGGTCTTCATCCGTAAAGACAATAGACGTGCTTGGTAGTAAC +
Preference number: 5 (lower is better)
Translates to: PSGVWLPCHCEMQLA*RSSSVKTIDVLGSN
Trigger: GTTACTACCAAGCACGTCTATTGTCTTTACGGATGAAGACCTGCACGCAAGCTGCATCTCACAGTGGCATGGCAGCCACACACCAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS GCA 90 bp GGCTTCATGGGGTATATCTTCAGGTTCGAGGGCTTCCTTGCCGTCTaGCAAGAACACTCGTCTTGCGGCCATGTTCAGATTCAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: GFMGYIFRFEGFLAV*QEHSSCGHVQIQLF
Trigger: GAAAAGCTGAATCTGAACATGGCCGCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAACCTGAAGATATACCCCATGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS-3UTR CAA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACGCCACACTGATGACCTaGAAGGGCCCTTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDATLMT*KGPCKK
Trigger: CTTCTTACAAGGGCCCTTCAAGGTCATCAGTGTGGC...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTGCCACACTGATGACCTaGAAGGGCCCTTGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGATLMT*KGPCKK
Trigger: CTTCTTACAAGGGCCCTTCAAGGTCATCAGTGTGGC...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp ATAGTGAAGTGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATTCTGGCAAGCCCAAGTaGTTCCGTGCATTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: IVKWVERKLWSQGHPGLNSGKPK*FRAFCK
Trigger: CTTACAGAATGCACGGAACAACTTGGGCTTGCCAGA...ATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCACTTCACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCGGCTGCACAGGGCTCTaGGTAGGAACCATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSGCTGL*VGTMVA
Trigger: AGCCACCATGGTTCCTACCAAGAGCCCTGTGCAGCC...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATGGCTGCTTATACAGGTaGCTCGGCTTGACTGCTATA +
Preference number: 5 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNGCLYR*LGLTAI
Trigger: TATAGCAGTCAAGCCGAGCAACCTGTATAAGCAGCC...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCGTCCCAGGACTGAATaGGCTCTCCACTGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSRPRTE*ALHWGC
Trigger: ACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGACG...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGAGACAGGAGAATTGCTaGAACCTGGGAAGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGRQENC*NLGRGA
Trigger: AGCTCCCCTTCCCAGGTTCAAGCAATTCTCCTGTCT...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CAGCCACACACTGGCTACAGGCCACAGGATCGATGGCGCTATTTGACTCCTGCTCATCATATGGTCAGTTaGAATTGGGCTATCCGATCC +
Preference number: 5 (lower is better)
Translates to: QPHTGYRPQDRWRYLTPAHHMVS*NWAIRS
Trigger: GGATCGGATAGCCCAATTCAAACTGACCATATGATG...AGCAGGAGTCAAATAGCGCCATCGATCCTGTGGCCTGTAGCCAGTGTGTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAGAGCATGTGTTCGTTTaGGGAGTCCAGCTCTTAACC +
Preference number: 5 (lower is better)
Translates to: SSSFLTSATVSSPVSSREEHVFV*GVQLLT
Trigger: GGTTAAGAGCTGGACTCCCAAAACGAACACATGCTC...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS GCA 90 bp AAACATCGGCTTCATGGGGTATATCTTCAGGTTCGAGGGCTTCCTTaGCGTCTGCCAAGAACACTCGTCTTGCGGCCATGTTCAGATTCA +
Preference number: 5 (lower is better)
Translates to: KHRLHGVYLQVRGLP*RLPRTLVLRPCSDS
Trigger: TGAATCTGAACATGGCCGCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAACCTGAAGATATACCCCATGAAGCCGATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS GCA 90 bp GCTGATGACTACCATCAGATTTCTTCTCCACCAAAACCACCTCCATaGCTGATCGGAGATTGGGACCTTGAACCCCCAAGACTAGCTGAG +
Preference number: 5 (lower is better)
Translates to: ADDYHQISSPPKPPP*LIGDWDLEPPRLAE
Trigger: CTCAGCTAGTCTTGGGGGTTCAAGGTCCCAATCTCCGATCAGGCATGGAGGTGGTTTTGGTGGAGAAGAAATCTGATGGTAGTCATCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS-3UTR CAA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTGGCTGCTTATACAGGTaGCTCGGCTTGACTGCTATA +
Preference number: 5 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGGCLYR*LGLTAI
Trigger: TATAGCAGTCAAGCCGAGCAACCTGTATAAGCAGCC...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGCTCTGCAACCCTCAGTaGACCCACTGGAGCACTGAC +
Preference number: 5 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERLCNPQ*THWSTD
Trigger: GTCAGTGCTCCAGTGGGTCAACTGAGGGTTGCAGAG...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTGGCCAAAAGAACTCCTaGGATGTACATCTTAGCTCC +
Preference number: 5 (lower is better)
Translates to: SFLTSATVSSPVSSREPSGQKNS*DVHLSS
Trigger: GGAGCTAAGATGTACATCCAAGGAGTTCTTTTGGCC...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTTCACAAACTTCCCAATaGCCACATCCAGGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: SFLTSATVSSPVSSREPSSQTSQ*PHPGSR
Trigger: TCTGCTACCTGGATGTGGCAATTGGGAAGTTTGTGA...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGAAACTCCTCATTAAGTaGGCCACTGGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGKLLIK*ATGKDR
Trigger: CCTGTCCTTCCCAGTGGCCAACTTAATGAGGAGTTT...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CAA 90 bp CCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCATGGACAGGTCAGGATaGATCCAGAGTTCTCCACAT +
Preference number: 5 (lower is better)
Translates to: PGTQHCPASISLALLLLSMDRSG*IQSSPH
Trigger: ATGTGGAGAACTCTGGATCAATCCTGACCTGTCCAT...GCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp GCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGAAAGCAGACAGGGCCACCCAGGTTaGAATCCCATCACTACCACT +
Preference number: 5 (lower is better)
Translates to: AEPSVQSFHLQRLLQESRQGHPG*NPITTT
Trigger: AGTGGTAGTGATGGGATTCAAACCTGGGTGGCCCTG...TCTGCTTTCCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS GCA 90 bp CCCATTTTTGTATGCAATTATTTTCACTGCCTTCTGGTGTGTGGCTaGCATGCCACTGTGAGATGCAGCTTGCGTGCAGGTCTTCATCCG +
Preference number: 5 (lower is better)
Translates to: PIFVCNYFHCLLVCG*HATVRCSLRAGLHP
Trigger: CGGATGAAGACCTGCACGCAAGCTGCATCTCACAGTGGCATGGCAGCCACACACCAGAAGGCAGTGAAAATAATTGCATACAAAAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CCA 90 bp GCACAGGGGCATATGGCTCTGTTGTCTTACAGATGGGTTTCTTCATaGGAGGACTGCTCGGAACAAGCAGTCCTTGTATTGGCCAATCAA +
Preference number: 5 (lower is better)
Translates to: AQGHMALLSYRWVSS*EDCSEQAVLVLANQ
Trigger: TTGATTGGCCAATACAAGGACTGCTTGTTCCGAGCAGTCCTCCCATGAAGAAACCCATCTGTAAGACAACAGAGCCATATGCCCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000437348.5
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS-3UTR CAA 90 bp CCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCAGGACTCTTTGGTATATACTTaGGAGGCTGCTCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: PCPIDTQMTISRSMSSQDSLVYT*EAALAS
Trigger: GCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGA...GTCCTGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTTCTTTGGTATATACTTaGGAGGCTGCTCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGSLVYT*EAALAS
Trigger: GCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGA...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATAACAGGAGCTGCATCTaGCTTTTGTTTCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNNRSCI*LLFLRV
Trigger: GACTCTGAGAAACAAAAGCAAGATGCAGCTCCTGTT...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp ATGGTGACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGAGGGTAAGCAAAGACTaGTCTATACCATCCAAACTA +
Preference number: 5 (lower is better)
Translates to: MVTPQCLWLEGPAAFGFWRVSKD*SIPSKL
Trigger: TAGTTTGGATGGTATAGACAAGTCTTTGCTTACCCT...CCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGTCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCGCTGGGTGGGTCATTTaGAGACGAGAGGAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSAGWVI*RREEQS
Trigger: AGACTGCTCCTCTCGTCTCAAAATGACCCACCCAGC...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACCATGTCCCCATCATGTaGCTGTGGGGTGGGACTGAT +
Preference number: 5 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDHVPIM*LWGGTD
Trigger: ATCAGTCCCACCCCACAGCAACATGATGGGGACATG...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATTATGGTCAGTTTGAATaGGGCTATCCGATCCCAAAT +
Preference number: 5 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDYGQFE*GYPIPN
Trigger: ATTTGGGATCGGATAGCCCAATTCAAACTGACCATA...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATCTGGTCAGGTATCTGTaGACTGGTACAGTTGAAATT +
Preference number: 5 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDLVRYL*TGTVEI
Trigger: AATTTCAACTGTACCAGTCAACAGATACCTGACCAG...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGCGGAACAAGCAGTCCTaGTATTGGCCAATCAAACTC +
Preference number: 5 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGRNKQS*YWPIKL
Trigger: GAGTTTGATTGGCCAATACAAGGACTGCTTGTTCCG...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS TCA 90 bp GCAATTATTTTCACTGCCTTCTGGTGTGTGGCTGCCATGCCACTGTaGGATGCAGCTTGCGTGCAGGTCTTCATCCGTAAAGACAATAGA +
Preference number: 5 (lower is better)
Translates to: AIIFTAFWCVAAMPL*DAACVQVFIRKDNR
Trigger: TCTATTGTCTTTACGGATGAAGACCTGCACGCAAGCTGCATCTCACAGTGGCATGGCAGCCACACACCAGAAGGCAGTGAAAATAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS TCA 90 bp GGTGCCCCCACAACCTGGCTTTCTCCCATCACCATGGTGATTTGCTaGGTCATATCCTCAGCAGGTCTCAGAAGGTATACTGTAAAGATA +
Preference number: 5 (lower is better)
Translates to: GAPTTWLSPITMVIC*VISSAGLRRYTVKI
Trigger: TATCTTTACAGTATACCTTCTGAGACCTGCTGAGGATATGACTCAGCAAATCACCATGGTGATGGGAGAAAGCCAGGTTGTGGGGGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406071.6
ENST00000483396.5
CDS GCA 90 bp TCTCAGAAAGAAATTGCCTTCCAAGTATTACCCCGTTATAGCTGGTaGCCCCACAACCTGGCTTTCTCCCATCACCATGGTGATTTGCTG +
Preference number: 5 (lower is better)
Translates to: SQKEIAFQVLPRYSW*PHNLAFSHHHGDLL
Trigger: CAGCAAATCACCATGGTGATGGGAGAAAGCCAGGTTGTGGGGGCACCAGCTATAACGGGGTAATACTTGGAAGGCAATTTCTTTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406071.6
ENST00000483396.5
CDS-3UTR CAA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTAACAGGAGCTGCATCTaGCTTTTGTTTCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGNRSCI*LLFLRV
Trigger: GACTCTGAGAAACAAAAGCAAGATGCAGCTCCTGTT...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp ACACCACAATGTCTGTGGCTTGAGGGCCCTGCTGCCTTCGGATTCTGGCATAATCTTTCTGCAAAGCATTaGGAGGTAGAAATGGTTCAC +
Preference number: 5 (lower is better)
Translates to: TPQCLWLEGPAAFGFWHNLSAKH*EVEMVH
Trigger: GTGAACCATTTCTACCTCCAAATGCTTTGCAGAAAG...ATTATGCCAGAATCCGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp GGGCTGTGTACCTGTAGTAAGAGAAGTATAGTGAAGTGGGTAGAGCGGAAGCTCCACACTCGTTTTGTGTaGGGCTGCTTATACAGGTTG +
Preference number: 5 (lower is better)
Translates to: GLCTCSKRSIVKWVERKLHTRFV*GCLYRL
Trigger: CAACCTGTATAAGCAGCCCAACACAAAACGAGTGTG...GAGCTTCCGCTCTACCCACTTCACTATACTTCTCTTACTACAGGTACACAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCTTTATCAGTGAGCCCTaGTGGGTAGAGCTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSFISEP*WVELCP
Trigger: GGGACAGAGCTCTACCCACAAGGGCTCACTGATAAA...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGTGTTGTAATTTTGGTTaGCGGCTCAGGCCAAGAGTA +
Preference number: 5 (lower is better)
Translates to: LRPRVEELNLMSPSCCCGCCNFG*RLRPRV
Trigger: TACTCTTGGCCTGAGCCGCAAACCAAAATTACAACA...CCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACAGACAGGAGAATTGCTaGAACCTGGGAAGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDRQENC*NLGRGA
Trigger: AGCTCCCCTTCCCAGGTTCAAGCAATTCTCCTGTCT...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CTGGCAGTTGCTTCAGACCAAGGTTGCTGGCACTTTCTTGCAGAACCTCTTCTGAAAAGGGCTCTCCCGTaGAAACATAAACATCGGCTT +
Preference number: 5 (lower is better)
Translates to: LAVASDQGCWHFLAEPLLKRALP*KHKHRL
Trigger: AAGCCGATGTTTATGTTTCAACGGGAGAGCCCTTTT...CAGAAGAGGTTCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCAACTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTAGGTGTGATGGAATTTaGCAGGCATTTTTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: SFLTSATVSSPVSSREPSRCDGI*QAFFKQ
Trigger: CTGCTTGAAAAATGCCTGCAAAATTCCATCACACCT...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AGCCAGGCAGCCCTGAGTTATCGCTCGGCTCAGGATCATTCCAGTCTTGGTGATAGAGACCCAAATTTTTaGCTCATTCTTCAGCGAAAG +
Preference number: 5 (lower is better)
Translates to: SQAALSYRSAQDHSSLGDRDPNF*LILQRK
Trigger: CTTTCGCTGAAGAATGAGCAAAAAATTTGGGTCTCT...ATCACCAAGACTGGAATGATCCTGAGCCGAGCGATAACTCAGGGCTGCCTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp CAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCCATCATGTTGCTGTGGGGTCAAGCAGTCCTTGTATaGGCCAATCAAACTCCTCAT +
Preference number: 5 (lower is better)
Translates to: QAKSRRTEPHVPIMLLWGQAVLV*ANQTPH
Trigger: ATGAGGAGTTTGATTGGCCAATACAAGGACTGCTTG...ACCCCACAGCAACATGATGGGGACATGAGGTTCAGTTCTTCTACTCTTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CAA 90 bp CCCAGGGACTCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGTTATGCACAGCAAGCTaGCTTCCAGATACAATGTCA +
Preference number: 5 (lower is better)
Translates to: PRDSALPSFHFISSIAAELCTAS*LPDTMS
Trigger: TGACATTGTATCTGGAAGCAAGCTTGCTGTGCATAA...CTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGAGTCCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS TCA 90 bp TGTGCCTCTGTATGTCTTATAAGTTCCATGAGTTTAATTTCCTGTTaGGTCTGTTCGGTCCAGCCTCCTTCAACCACCACGGGCTGCACA +
Preference number: 5 (lower is better)
Translates to: CASVCLISSMSLISC*VCSVQPPSTTTGCT
Trigger: TGTGCAGCCCGTGGTGGTTGAAGGAGGCTGGACCGAACAGACTCAACAGGAAATTAAACTCATGGAACTTATAAGACATACAGAGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS GCA 90 bp TTTTGTATGCAATTATTTTCACTGCCTTCTGGTGTGTGGCTGCCATaGCACTGTGAGATGCAGCTTGCGTGCAGGTCTTCATCCGTAAAG +
Preference number: 5 (lower is better)
Translates to: FCMQLFSLPSGVWLP*HCEMQLACRSSSVK
Trigger: CTTTACGGATGAAGACCTGCACGCAAGCTGCATCTCACAGTGGCATGGCAGCCACACACCAGAAGGCAGTGAAAATAATTGCATACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CCA 90 bp AGTTCTCAGAAAGAAATTGCCTTCCAAGTATTACCCCGTTATAGCTaGTGCCCCCACAACCTGGCTTTCTCCCATCACCATGGTGATTTG +
Preference number: 5 (lower is better)
Translates to: SSQKEIAFQVLPRYS*CPHNLAFSHHHGDL
Trigger: CAAATCACCATGGTGATGGGAGAAAGCCAGGTTGTGGGGGCACCAGCTATAACGGGGTAATACTTGGAAGGCAATTTCTTTCTGAGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406071.6
ENST00000483396.5
CDS CCA 90 bp ATTCTTCTCTCCATTCTGCAAAACTCTGAGTCGCACAGGGGCATATaGCTCTGTTGTCTTACAGATGGGTTTCTTCATGGGAGGACTGCT +
Preference number: 5 (lower is better)
Translates to: ILLSILQNSESHRGI*LCCLTDGFLHGRTA
Trigger: AGCAGTCCTCCCATGAAGAAACCCATCTGTAAGACAACAGAGCCATATGCCCCTGTGCGACTCAGAGTTTTGCAGAATGGAGAGAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000437348.5
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCTCTGTTCTCATGGATaGTCCACAAGCCAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSLCSHG*STSQAE
Trigger: CTCTGCTTGGCTTGTGGACAATCCATGAGAACAGAG...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp TGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTACAATCCTCTCTGTTCTCATGGATaGTCCACAAGCCAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: CPASISLALLLLSLQYNPLCSHG*STSQAE
Trigger: CTCTGCTTGGCTTGTGGACAATCCATGAGAACAGAG...AGGATTGTACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp GAAACCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCATACAGGTTGCTCGGCTaGACTGCTATACGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: ETMSHRHTDDHISLYVVPYRLLG*TAIRLV
Trigger: AACCAAACGTATAGCAGTCAAGCCGAGCAACCTGTA...TGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp TATGTGGAAGACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACTATACAGGTTGCTCGGCTaGACTGCTATACGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: YVEDQLPWVLRRVDTVQLYRLLG*TAIRLV
Trigger: AACCAAACGTATAGCAGTCAAGCCGAGCAACCTGTA...TAGTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp GAAACCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCACACACTCGTTTTGTGTaGGGCTGCTTATACAGGTTG +
Preference number: 5 (lower is better)
Translates to: ETMSHRHTDDHISLYVVPHTRFV*GCLYRL
Trigger: CAACCTGTATAAGCAGCCCAACACAAAACGAGTGTG...TGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATCGTCCCAGGACTGAATaGGCTCTCCACTGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHRPRTE*ALHWGC
Trigger: ACACCCCCAGTGGAGAGCCAATTCAGTCCTGGGACG...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATCACAATGTCTGTGGCTaGAGGGCCCTGCTGCCTTCG +
Preference number: 5 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHHNVCG*RALLPS
Trigger: CGAAGGCAGCAGGGCCCTCAAGCCACAGACATTGTG...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTGTTGATGGAAGAACCTaGAAGCCTTTGATGAATCTT +
Preference number: 5 (lower is better)
Translates to: SFLTSATVSSPVSSREPSVDGRT*KPLMNL
Trigger: AAGATTCATCAAAGGCTTCAAGGTTCTTCCATCAAC...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp TCAGCACTGCCCAGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTATCCTTCCCCTTTTCATaGTACAATCTCCGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SALPSFHFISSIAAEPSVSFPFS*YNLRAA
Trigger: TGCAGCTCGGAGATTGTACAATGAAAAGGGGAAGGA...TACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCTGGGCAGTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp TCTCCGGCATCCCTTCAATTCTGTGAGCCCCCTCTTTCGCTTCATGTAATCTCCTGGAAGCATTTTCCGTaGTTAGAGGATCTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: SPASLQFCEPPLSLHVISWKHFP*LEDLLA
Trigger: TGCAAGAAGATCCTCTAACAACGGAAAATGCTTCCA...GGAGATTACATGAAGCGAAAGAGGGGGCTCACAGAATTGAAGGGATGCCGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp ATAGTGAAGTGGGTAGAGCGGAAGCTCTGGTCTCAGGGCCACCCAGGTTTGAATGCAATTTACTATGCTTaGGTGAACAGCTGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: IVKWVERKLWSQGHPGLNAIYYA*VNSCVS
Trigger: AGAAACACAGCTGTTCACCAAAGCATAGTAAATTGC...ATTCAAACCTGGGTGGCCCTGAGACCAGAGCTTCCGCTCTACCCACTTCACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS GCA 90 bp GACTTTTCATATTCAAGCTTTCCAGGCCAGGACTCCAAGCTAGGCTaGAGCAAGTTCTCAGAAAGAAATTGCCTTCCAAGTATTACCCCG +
Preference number: 5 (lower is better)
Translates to: DFSYSSFPGQDSKLG*SKFSERNCLPSITP
Trigger: CGGGGTAATACTTGGAAGGCAATTTCTTTCTGAGAACTTGCTGCAGCCTAGCTTGGAGTCCTGGCCTGGAAAGCTTGAATATGAAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406071.6
ENST00000483396.5
CDS GCA 90 bp CATATGGCTCTGTTGTCTTACAGATGGGTTTCTTCATGGGAGGACTaGTCGGAACAAGCAGTCCTTGTATTGGCCAATCAAACTCCTCAT +
Preference number: 5 (lower is better)
Translates to: HMALLSYRWVSSWED*SEQAVLVLANQTPH
Trigger: ATGAGGAGTTTGATTGGCCAATACAAGGACTGCTTGTTCCGAGCAGTCCTCCCATGAAGAAACCCATCTGTAAGACAACAGAGCCATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406071.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CCA 90 bp TGTCATCCTCATCAAAGTCATGTGAAGTTTCCTGCCAGGCATACCTaGGAAGTGTGTGACAAGCCTTCATTCGAAGATGAGCTCTTACGT +
Preference number: 5 (lower is better)
Translates to: CHPHQSHVKFPARHT*EVCDKPSFEDELLR
Trigger: ACGTAAGAGCTCATCTTCGAATGAAGGCTTGTCACACACTTCCCAGGTATGCCTGGCAGGAAACTTCACATGACTTTGATGAGGATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGGCTGCACAGGGCTCTaGGTAGGAACCATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQGCTGL*VGTMVA
Trigger: AGCCACCATGGTTCCTACCAAGAGCCCTGTGCAGCC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCGAGTTTAATTTCCTGTaGAGTCTGTTCGGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSEFNFL*SLFGPA
Trigger: GGCTGGACCGAACAGACTCAACAGGAAATTAAACTC...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACGAGTTTAATTTCCTGTaGAGTCTGTTCGGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDEFNFL*SLFGPA
Trigger: GGCTGGACCGAACAGACTCAACAGGAAATTAAACTC...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp ACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAGATACAGGAGAGATGTCCTTCAACCTACCATaGAGGGAGGATTCTGACAGC +
Preference number: 5 (lower is better)
Translates to: TRQPQLKGKEYCSDTGEMSFNLP*REDSDS
Trigger: GCTGTCAGAATCCTCCCTCAATGGTAGGTTGAAGGA...CATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp GGGCTGTGTACCTGTAGTAAGAGAAGTATAGTGAAGTGGGTAGAGCGGAAGCTCAACTCTTTTGGGGTTTaGAAACCATGTCCCATAGAC +
Preference number: 5 (lower is better)
Translates to: GLCTCSKRSIVKWVERKLNSFGV*KPCPID
Trigger: GTCTATGGGACATGGTTTCAAAACCCCAAAAGAGTT...GAGCTTCCGCTCTACCCACTTCACTATACTTCTCTTACTACAGGTACACAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp CAGATACACACAGAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCATTTATCAGTGAGCCCTaGTGGGTAGAGCTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: QIHTETRQPQLKGKEYCSFISEP*WVELCP
Trigger: GGGACAGAGCTCTACCCACAAGGGCTCACTGATAAA...TGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTCTGTGTGTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTTTTTCTTATTTGCAATaGGTAGTAAACGCCACTCCA +
Preference number: 5 (lower is better)
Translates to: SFLTSATVSSPVSSREPSFSYLQ*VVNATP
Trigger: TGGAGTGGCGTTTACTACCAATTGCAAATAAGAAAA...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp TCTTCCAGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAAAAGGCTTTTAATGTGTaGGTAGACATAAGAGGAGAA +
Preference number: 5 (lower is better)
Translates to: SSSFLTSATVSSPVSSREKAFNV*VDIRGE
Trigger: TTCTCCTCTTATGTCTACCAACACATTAAAAGCCTT...TTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACTGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCTTTGACTCCTGCTGCTaGCTTCACTGCCTGAGAAAC +
Preference number: 5 (lower is better)
Translates to: KGLICNHDITSGKCTHSVFDSCC*LHCLRN
Trigger: GTTTCTCAGGCAGTGAAGCAAGCAGCAGGAGTCAAA...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AGTTTCCTCACCAGTGCTACTGTCAGCTCCCCCGTCTCCTCAAGAGAACCTTCTCTTGTTTCTTCCTTGTaGACTCATAGCTTATACTTC +
Preference number: 5 (lower is better)
Translates to: SFLTSATVSSPVSSREPSLVSSL*THSLYF
Trigger: GAAGTATAAGCTATGAGTCAACAAGGAAGAAACAAG...AGAAGGTTCTCTTGAGGAGACGGGGGAGCTGACAGTAGCACTGGTGAGGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACATGGACAGGTCAGGATaGATCCAGAGTTCTCCACAT +
Preference number: 5 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDMDRSG*IQSSPH
Trigger: ATGTGGAGAACTCTGGATCAATCCTGACCTGTCCAT...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS GCA 90 bp CAAGGTAAAGATTGGGGTTCCATCTTTGGTATATACTTTGGAGGCTaGTCTGGCAAGCCCAAGTTGTTCCGTGCATTCTGTAAGAAGCAT +
Preference number: 5 (lower is better)
Translates to: QGKDWGSIFGIYFGG*SGKPKLFRAFCKKH
Trigger: ATGCTTCTTACAGAATGCACGGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGATGGAACCCCAATCTTTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000597505.5
ENST00000684477.1
CDS GCA 90 bp CATATGGCTCTGTTGTCTTACAGATGGGTTTCTTCATGGGAGGACTaGTCGGAACAAGCAGTCCTTGTATTGGCCAATCAAACTCCTTTA +
Preference number: 5 (lower is better)
Translates to: HMALLSYRWVSSWED*SEQAVLVLANQTPL
Trigger: TAAAGGAGTTTGATTGGCCAATACAAGGACTGCTTGTTCCGAGCAGTCCTCCCATGAAGAAACCCATCTGTAAGACAACAGAGCCATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437348.5
CDS GCA 90 bp CAAGGTAAAGATTGGGGTTCCATCTTTGGTATATACTTTGGAGGCTaGTCTGGCAAGCCCAAGTTGTTCCGTGCATTCTGTAAGAAGCTA +
Preference number: 5 (lower is better)
Translates to: QGKDWGSIFGIYFGG*SGKPKLFRAFCKKL
Trigger: TAGCTTCTTACAGAATGCACGGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGATGGAACCCCAATCTTTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483396.5
CDS GCA 90 bp CCCTTAGAGACCCAAAGTAGTCCTCGCAAAGGTGTGATGGAATTTTaGAGGCATTTTTCAAGCAGAGGAACTGGGTTAAGTCTTAGAGAG +
Preference number: 5 (lower is better)
Translates to: PLETQSSPRKGVMEF*RHFSSRGTGLSLRE
Trigger: CTCTCTAAGACTTAACCCAGTTCCTCTGCTTGAAAAATGCCTGCAAAATTCCATCACACCTTTGCGAGGACTACTTTGGGTCTCTAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534722.5
CDS-3UTR CAA 90 bp GCTGAGCCTTCAGTACAATCCTTCCACTTACAAAGGCTGCTTCAGGAAAGCAGACTTTCTGCAAAGCATTaGGAGGTAGAAATGGTTCAC +
Preference number: 5 (lower is better)
Translates to: AEPSVQSFHLQRLLQESRLSAKH*EVEMVH
Trigger: GTGAACCATTTCTACCTCCAAATGCTTTGCAGAAAG...TCTGCTTTCCTGAAGCAGCCTTTGTAAGTGGAAGGATTGTACTGAAGGCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp TATGTGGAAGACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACTAAAATCCACACTCGTTTaGTGTTGGGCTGCTTATACA +
Preference number: 5 (lower is better)
Translates to: YVEDQLPWVLRRVDTVQLKSTLV*CWAAYT
Trigger: TGTATAAGCAGCCCAACACAAAACGAGTGTGGATTT...TAGTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp ATAAAACCAAGGGTGTTCCTGCCCTCTAGGCACTTATCATTTAGTTGGGGAGACTGTACTGTTGTAATTTaGGTTTGCGGCTCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: IKPRVFLPSRHLSFSWGDCTVVI*VCGSGQ
Trigger: TTGGCCTGAGCCGCAAACCAAAATTACAACAGTACA...GTCTCCCCAACTAAATGATAAGTGCCTAGAGGGCAGGAACACCCTTGGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCTGTACTGTTGTAATTTaGGTTTGCGGCTCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSCTVVI*VCGSGQ
Trigger: TTGGCCTGAGCCGCAAACCAAAATTACAACAGTACA...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CATATGTGGAAGACCAGTTGCCATGGGTATTACGCCGGGTGGATACAGTTCAACTTCCGGTTCTGTAACTaGCTTCTCTTCTCCAAAAAT +
Preference number: 5 (lower is better)
Translates to: HMWKTSCHGYYAGWIQFNFRFCN*LLFSKN
Trigger: ATTTTTGGAGAAGAGAAGCAAGTTACAGAACCGGAA...GTTGAACTGTATCCACCCGGCGTAATACCCATGGCAACTGGTCTTCCACATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS TCA 90 bp TTTTTCCGTTTTCTTTGGAAGACTGTCATCCTCATCAAAGTCATGTaGAGTTTCCTGCCAGGCATACCTGGGAAGTGTGTGACAAGCCTT +
Preference number: 5 (lower is better)
Translates to: FFRFLWKTVILIKVM*SFLPGIPGKCVTSL
Trigger: AAGGCTTGTCACACACTTCCCAGGTATGCCTGGCAGGAAACTTCACATGACTTTGATGAGGATGACAGTCTTCCAAAGAAAACGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CCA 90 bp GTAAGCTTGTTCCATAGAGGATTTTCAACTCTAGAATGTTTCCACTaGCCTGGCTTACTGGTTCCTTCATGTTTTATGGCCCACCTGACT +
Preference number: 5 (lower is better)
Translates to: VSLFHRGFSTLECFH*PGLLVPSCFMAHLT
Trigger: AGTCAGGTGGGCCATAAAACATGAAGGAACCAGTAAGCCAGGCCAGTGGAAACATTCTAGAGTTGAAAATCCTCTATGGAACAAGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406071.6
ENST00000483396.5
CDS-3UTR CAA 90 bp TCCTGGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTATTTCATAACAGGAGCTGCATCTaGCTTTTGTTTCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SWQWKFWVSDLTSQRLFHNRSCI*LLFLRV
Trigger: GACTCTGAGAAACAAAAGCAAGATGCAGCTCCTGTT...ATGAAATAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCCTTTCTGCAAAGCATTaGGAGGTAGAAATGGTTCAC +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSLSAKH*EVEMVH
Trigger: GTGAACCATTTCTACCTCCAAATGCTTTGCAGAAAG...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCAAATCCACACTCGTTTaGTGTTGGGCTGCTTATACA +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSKSTLV*CWAAYT
Trigger: TGTATAAGCAGCCCAACACAAAACGAGTGTGGATTT...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp GATAACTTTCACATAAAACTTGACCTTTCCCAAGTTGAAGTTCAGAAAACCATCCTCTGCAACCCTCAGTaGACCCACTGGAGCACTGAC +
Preference number: 5 (lower is better)
Translates to: DNFHIKLDLSQVEVQKTILCNPQ*THWSTD
Trigger: GTCAGTGCTCCAGTGGGTCAACTGAGGGTTGCAGAG...GATGGTTTTCTGAACTTCAACTTGGGAAAGGTCAAGTTTTATGTGAAAGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CAA 90 bp GATAACTTTCACATAAAACTTGACCTTTCCCAAGTTGAAGTTCAGAAAACCATCGGTTCGAGGGCTTCCTaGCCGTCTGCCAAGAACACT +
Preference number: 5 (lower is better)
Translates to: DNFHIKLDLSQVEVQKTIGSRAS*PSAKNT
Trigger: AGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAACC...GATGGTTTTCTGAACTTCAACTTGGGAAAGGTCAAGTTTTATGTGAAAGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CAA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTCATTGCCTCATTAAGTaGGCCACTGGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFHCLIK*ATGKDR
Trigger: CCTGTCCTTCCCAGTGGCCAACTTAATGAGGCAATG...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AAAAGTGAGGACAGCATGAAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGCACTCAGGGTGTTGTTaGTTAGATGGTTTTCCTAGA +
Preference number: 5 (lower is better)
Translates to: KSEDSMKSVLKAAVTTERHSGCC*LDGFPR
Trigger: TCTAGGAAAACCATCTAACAAACAACACCCTGAGTG...CCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTTCATGCTGTCCTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCGTTCTCAGAAAGAAATaGCCTTCCAAGTATTACCCC +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSVLRKK*PSKYYP
Trigger: GGGGTAATACTTGGAAGGCAATTTCTTTCTGAGAAC...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCTGGAAGCATTTTCCGTaGTTAGAGGATCTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSWKHFP*LEDLLA
Trigger: TGCAAGAAGATCCTCTAACAACGGAAAATGCTTCCA...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS TCA 90 bp ATGCCCATCCTGCCCCATGCCATTCTTAAAGAACAGAATTCGGACTaGGGTCCTCTCAGTAAGTTTCTTCATTCTAATAGAAAGAACAGG +
Preference number: 5 (lower is better)
Translates to: MPILPHAILKEQNSD*GPLSKFLHSNRKNR
Trigger: CCTGTTCTTTCTATTAGAATGAAGAAACTTACTGAGAGGACCTCAGTCCGAATTCTGTTCTTTAAGAATGGCATGGGGCAGGATGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS GCA 90 bp ATTGGGTTTACAGTATTCCCATCCAAAGTGCCTTCAGGGCTACTTTaGTGTAATACTTCCATTGCTTCAGTCAAGAGGGATAAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: IGFTVFPSKVPSGLL*CNTSIASVKRDKED
Trigger: GTCTTCCTTATCCCTCTTGACTGAAGCAATGGAAGTATTACAGCAAAGTAGCCCTGAAGGCACTTTGGATGGGAATACTGTAAACCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS-3UTR CAA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATCTCTGTTCTCATGGATaGTCCACAAGCCAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHLCSHG*STSQAE
Trigger: CTCTGCTTGGCTTGTGGACAATCCATGAGAACAGAG...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATTCTGGCAAGCCCAAGTaGTTCCGTGCATTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHSGKPK*FRAFCK
Trigger: CTTACAGAATGCACGGAACAACTTGGGCTTGCCAGA...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp TTCAGGAAAGCAGAGATAAAAGGGCTGTGTACCTGTAGTAAGAGAAGTATAGTGTCTTTGGTATATACTTaGGAGGCTGCTCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: FRKAEIKGLCTCSKRSIVSLVYT*EAALAS
Trigger: GCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGA...CACTATACTTCTCTTACTACAGGTACACAGCCCTTTTATCTCTGCTTTCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp ATAAAAGGGCTGTGTACCTGTAGTAAGAGAAGTATAGTGAAGTGGGTAGAGCGGATTGGGGTTCCATCTTaGGTATATACTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: IKGLCTCSKRSIVKWVERIGVPS*VYTLEA
Trigger: AGCCTCCAAAGTATATACCAAAGATGGAACCCCAAT...CCGCTCTACCCACTTCACTATACTTCTCTTACTACAGGTACACAGCCCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp TATTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTGGCTGCTTATACAGGTaGCTCGGCTTGACTGCTATA +
Preference number: 5 (lower is better)
Translates to: YYAGWIQFNYSMNIGLGGGCLYR*LGLTAI
Trigger: TATAGCAGTCAAGCCGAGCAACCTGTATAAGCAGCC...ACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp GAAACCATGTCCCATAGACACACAGATGACCATATCTCGCTCTATGTCGTCCCACCAGTCAGAAGCAATTaGATTAAATACTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: ETMSHRHTDDHISLYVVPPVRSN*IKYSAY
Trigger: GTATGCAGAGTATTTAATCAAATTGCTTCTGACTGG...TGGGACGACATAGAGCGAGATATGGTCATCTGTGTGTCTATGGGACATGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp ACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAGATACAGGAGAGATGAACTCTTTTGGGGTTTaGAAACCATGTCCCATAGAC +
Preference number: 5 (lower is better)
Translates to: TRQPQLKGKEYCSDTGEMNSFGV*KPCPID
Trigger: GTCTATGGGACATGGTTTCAAAACCCCAAAAGAGTT...CATCTCTCCTGTATCTGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTCCAAGAACACTCGTCTaGCGGCCATGTTCAGATTCA +
Preference number: 5 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFPRTLV*RPCSDS
Trigger: TGAATCTGAACATGGCCGCAAGACGAGTGTTCTTGG...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTGATCGATGGCGCTATTaGACTCCTGCTGCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: KSVLKAAVTTERYIVFSIDRWRY*TPAACF
Trigger: GAAGCAAGCAGCAGGAGTCAAATAGCGCCATCGATC...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTAGGATCATTCCAGTCTaGGTGATCAGCCACACACTG +
Preference number: 5 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFRIIPV*VISHTL
Trigger: CAGTGTGTGGCTGATCACCAAGACTGGAATGATCCT...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS TCA 90 bp GCAATGTCTGATTCTAGGTTCCTCAGGAATATTTGTTTCTTTTGCTaGGCAATGGACAGGTCAGGATTGATCCAGAGTTCTCCACATGAA +
Preference number: 5 (lower is better)
Translates to: AMSDSRFLRNICFFC*AMDRSGLIQSSPHE
Trigger: TTCATGTGGAGAACTCTGGATCAATCCTGACCTGTCCATTGCTCAGCAAAAGAAACAAATATTCCTGAGGAACCTAGAATCAGACATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CCA 90 bp ATCAATGCAGGTAGAATGGTAAAGGTGCATCTGAGGAAGATGAATTaGATGAGTGGAGATGAACTTGAGTGCAAGGCAGATAATGAATGC +
Preference number: 5 (lower is better)
Translates to: INAGRMVKVHLRKMN*MSGDELECKADNEC
Trigger: GCATTCATTATCTGCCTTGCACTCAAGTTCATCTCCACTCATCCAATTCATCTTCCTCAGATGCACCTTTACCATTCTACCTGCATTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429306.2
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTCTGGCAAGCCCAAGTaGTTCCGTGCATTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQSGKPK*FRAFCK
Trigger: CTTACAGAATGCACGGAACAACTTGGGCTTGCCAGA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp ACTTCCTGGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTATTTAGGGTAAGCAAAGACTaGTCTATACCATCCAAACTA +
Preference number: 5 (lower is better)
Translates to: TSWQWKFWVSDLTSQRLFRVSKD*SIPSKL
Trigger: TAGTTTGGATGGTATAGACAAGTCTTTGCTTACCCT...AAATAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp TATTACGCCGGGTGGATACAGTTCAACTATTCAATGAATATAGGATTAGGTGGTGAGTTTAATTTCCTGTaGAGTCTGTTCGGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: YYAGWIQFNYSMNIGLGGEFNFL*SLFGPA
Trigger: GGCTGGACCGAACAGACTCAACAGGAAATTAAACTC...ACCACCTAATCCTATATTCATTGAATAGTTGAACTGTATCCACCCGGCGTAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp TGTAATTTTGGTTTGCGGCTCAGGCCAAGAGTAGAAGAACTGAACCTCATGTCCGATCCTCTATTCCCATaGTACTGTTGTAATTTTGGT +
Preference number: 5 (lower is better)
Translates to: CNFGLRLRPRVEELNLMSDPLFP*YCCNFG
Trigger: ACCAAAATTACAACAGTACAATGGGAATAGAGGATC...GGACATGAGGTTCAGTTCTTCTACTCTTGGCCTGAGCCGCAAACCAAAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCTCCTATTTGGCCATCTaGGAATGGAATCTGGAATTT +
Preference number: 5 (lower is better)
Translates to: KGLICNHDITSGKCTHSVSYLAI*EWNLEF
Trigger: AAATTCCAGATTCCATTCCAAGATGGCCAAATAGGA...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AGGGCAAGGCATGCATTAAAATGTGATAATAGCACACTTCTGGGATACGTGAAGGCTGTAATACTTCCATaGCTTCAGTCAAGAGGGATA +
Preference number: 5 (lower is better)
Translates to: RARHALKCDNSTLLGYVKAVILP*LQSRGI
Trigger: TATCCCTCTTGACTGAAGCAATGGAAGTATTACAGC...CTTCACGTATCCCAGAAGTGTGCTATTATCACATTTTAATGCATGCCTTGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CAA 90 bp CAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTTTAAGTCCAGTCCAAGAACACTCGTCTaGCGGCCATGTTCAGATTCA +
Preference number: 5 (lower is better)
Translates to: QTGSSSNRISFFKYFKSSPRTLV*RPCSDS
Trigger: TGAATCTGAACATGGCCGCAAGACGAGTGTTCTTGG...ACTGGACTTAAAATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CAA 90 bp ACTAGGGTGCTACAGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATAAAAGGGCTCTCCCGTaGAAACATAAACATCGGCTT +
Preference number: 5 (lower is better)
Translates to: TRVLQTGSSSNRISFFKYKRALP*KHKHRL
Trigger: AAGCCGATGTTTATGTTTCAACGGGAGAGCCCTTTT...ATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCTGTAGCACCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CAA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTTGCTTCAGACCAAGGTaGCTGGCACTTTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: KSVLKAAVTTERYIVFSICFRPR*LALSCR
Trigger: TCTGCAAGAAAGTGCCAGCAACCTTGGTCTGAAGCA...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTAGTCTATCTCCTTCCTaGCTCTGTCTGCATTGCCTC +
Preference number: 5 (lower is better)
Translates to: KSVLKAAVTTERYIVFSISLSPS*LCLHCL
Trigger: GAGGCAATGCAGACAGAGCAAGGAAGGAGATAGACT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCGTCTCACTCAGGGTGTaGTTTGTTAGATGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: NSIRIQKGLICNHDITSGVSLRV*FVRWFS
Trigger: GGAAAACCATCTAACAAACAACACCCTGAGTGAGAC...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATCATCACCATGGTGATTaGCTGAGTCATATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHHHHGD*LSHILS
Trigger: GCTGAGGATATGACTCAGCAAATCACCATGGTGATG...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CAA 90 bp ACTTCCTGGCAGTGGAAATTTTGGGTGAGTGACTTAACCTCTCAGAGGCTATTTGAATATTTGTTTCTTTaGCTGAGCAATGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: TSWQWKFWVSDLTSQRLFEYLFL*LSNGQV
Trigger: GACCTGTCCATTGCTCAGCAAAAGAAACAAATATTC...AAATAGCCTCTGAGAGGTTAAGTCACTCACCCAAAATTTCCACTGCCAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS-3UTR CAA 90 bp AGCTTCCATTTCATTAGCTCTATTGCTGCTGAGCCTTCAGTACAATCCTTCCACAAGGCTCCTTCAATGTaGAGATTTTCTTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SFHFISSIAAEPSVQSFHKAPSM*RFSSAS
Trigger: AGAAGCTGAAGAAAATCTCAACATTGAAGGAGCCTT...GTGGAAGGATTGTACTGAAGGCTCAGCAGCAATAGAGCTAATGAAATGGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444572.6
CDS TCA 90 bp AACATCCTATCAACACATAAATGCCCAGATACTCCAGATGGTGAATaGGGTGGCATCTCTTGGATGATTCAGATGACATACAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: NILSTHKCPDTPDGE*GGISWMIQMTYNLK
Trigger: CTTCAAGTTGTATGTCATCTGAATCATCCAAGAGATGCCACCTCATTCACCATCTGGAGTATCTGGGCATTTATGTGTTGATAGGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483396.5
CDS-3UTR CAA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATAACCCCTGGAAGCAATaGTTTCAGTCCTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHNPWKQ*FQSFLC
Trigger: ACAGAGAAAGGACTGAAACAATTGCTTCCAGGGGTT...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTACAGGTTGCTCGGCTaGACTGCTATACGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQYRLLG*TAIRLV
Trigger: AACCAAACGTATAGCAGTCAAGCCGAGCAACCTGTA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGCACACTCGTTTTGTGTaGGGCTGCTTATACAGGTTG +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQHTRFV*GCLYRL
Trigger: CAACCTGTATAAGCAGCCCAACACAAAACGAGTGTG...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp AAAGGTCTTATATGCAACCATGATATCACCTCTGGCAAATGCACTCACTCGGTCCTGGAATTTTCTTATTaGCAATTGGTAGTAAACGCC +
Preference number: 5 (lower is better)
Translates to: KGLICNHDITSGKCTHSVLEFSY*QLVVNA
Trigger: GGCGTTTACTACCAATTGCAAATAAGAAAATTCCAG...GACCGAGTGAGTGCATTTGCCAGAGGTGATATCATGGTTGCATATAAGACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AGGCATGCATTAAAATGTGATAATAGCACACTTCTGGGATACGTGAAGCACGAGTCCTATTTGGCCATCTaGGAATGGAATCTGGAATTT +
Preference number: 5 (lower is better)
Translates to: RHALKCDNSTLLGYVKHESYLAI*EWNLEF
Trigger: AAATTCCAGATTCCATTCCAAGATGGCCAAATAGGA...CTCGTGCTTCACGTATCCCAGAAGTGTGCTATTATCACATTTTAATGCATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTCCTTCCCCTTTTCATaGTACAATCTCCGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQSFPFS*YNLRAA
Trigger: TGCAGCTCGGAGATTGTACAATGAAAAGGGGAAGGA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CAA 90 bp AGGCATGCATTAAAATGTGATAATAGCACACTTCTGGGATACGTGAAGCACGAGTTGGTTTTCCGTCTTTaGATATCAGTAGGAAGCATC +
Preference number: 5 (lower is better)
Translates to: RHALKCDNSTLLGYVKHELVFRL*ISVGSI
Trigger: GATGCTTCCTACTGATATCAAAAGACGGAAAACCAA...CTCGTGCTTCACGTATCCCAGAAGTGTGCTATTATCACATTTTAATGCATGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS TCA 90 bp TCAGGAATATTTGTTTCTTTTGCTGAGCAATGGACAGGTCAGGATTaGTCCAGAGTTCTCCACATGAAACATACACCAGTTCATCTCTTT +
Preference number: 5 (lower is better)
Translates to: SGIFVSFAEQWTGQD*SRVLHMKHTPVHLF
Trigger: AAAGAGATGAACTGGTGTATGTTTCATGTGGAGAACTCTGGATCAATCCTGACCTGTCCATTGCTCAGCAAAAGAAACAAATATTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGAACCCCTGGAAGCAATaGTTTCAGTCCTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQNPWKQ*FQSFLC
Trigger: ACAGAGAAAGGACTGAAACAATTGCTTCCAGGGGTT...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATATTGGGGTTCCATCTTaGGTATATACTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHIGVPS*VYTLEA
Trigger: AGCCTCCAAAGTATATACCAAAGATGGAACCCCAAT...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTGTTGTAATTTTGGTTaGCGGCTCAGGCCAAGAGTA +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQCCNFG*RLRPRV
Trigger: TACTCTTGGCCTGAGCCGCAAACCAAAATTACAACA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp CAGATACACACAGAAACGAGACAACCACAGCTTAAAGGAAAGGAGTATTGCTCAGATCCTCTATTCCCATaGTACTGTTGTAATTTTGGT +
Preference number: 5 (lower is better)
Translates to: QIHTETRQPQLKGKEYCSDPLFP*YCCNFG
Trigger: ACCAAAATTACAACAGTACAATGGGAATAGAGGATC...TGAGCAATACTCCTTTCCTTTAAGCTGTGGTTGTCTCGTTTCTGTGTGTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303697.8
CDS-3UTR CAA 90 bp ACTTCTTCCTGTTCCTTATGGTGTTCCTTTGCCGTCATTGAAAGAATGACTTTTGCTGTAATACTTCCATaGCTTCAGTCAAGAGGGATA +
Preference number: 5 (lower is better)
Translates to: TSSCSLWCSFAVIERMTFAVILP*LQSRGI
Trigger: TATCCCTCTTGACTGAAGCAATGGAAGTATTACAGC...AAAAGTCATTCTTTCAATGACGGCAAAGGAACACCATAAGGAACAGGAAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCACTGAGGATAAGCCTTaGAATAAATGCAACCATCAG +
Preference number: 5 (lower is better)
Translates to: NSIRIQKGLICNHDITSGTEDKP*NKCNHQ
Trigger: CTGATGGTTGCATTTATTCAAAGGCTTATCCTCAGT...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp TTGCACAGGCTAATTTCAGCTGGCATAAGCTTTTATAAGGATGCAAAAACAGAGTTGACCTTTCCCAAGTaGAAGTTCAGAAAACCATCC +
Preference number: 5 (lower is better)
Translates to: LHRLISAGISFYKDAKTELTFPK*KFRKPS
Trigger: GGATGGTTTTCTGAACTTCAACTTGGGAAAGGTCAA...CTCTGTTTTTGCATCCTTATAAAAGCTTATGCCAGCTGAAATTAGCCTGTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CAA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATAGGGTAAGCAAAGACTaGTCTATACCATCCAAACTA +
Preference number: 5 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHRVSKD*SIPSKL
Trigger: TAGTTTGGATGGTATAGACAAGTCTTTGCTTACCCT...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGAAATCCACACTCGTTTaGTGTTGGGCTGCTTATACA +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQKSTLV*CWAAYT
Trigger: TGTATAAGCAGCCCAACACAAAACGAGTGTGGATTT...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGAACTCTTTTGGGGTTTaGAAACCATGTCCCATAGAC +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQNSFGV*KPCPID
Trigger: GTCTATGGGACATGGTTTCAAAACCCCAAAAGAGTT...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000406071.6
CDS-3UTR CAA 90 bp AACAGCATTAGGATCCAAAAAGGTCTTATATGCAACCATGATATCACCTCTGGCATATTGGGATCTACCTaGTTCTGTAGAAAATGGTTC +
Preference number: 5 (lower is better)
Translates to: NSIRIQKGLICNHDITSGILGST*FCRKWF
Trigger: GAACCATTTTCTACAGAACAAGGTAGATCCCAATAT...GCCAGAGGTGATATCATGGTTGCATATAAGACCTTTTTGGATCCTAATGCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp AAATCAGTTCTCAAAGCAGCTGTCACCACTGAGAGGTACATAGTTTTTAGTATTAATAAACTTTTAGCTTaGTTCTGTCTGGCATGGCCC +
Preference number: 5 (lower is better)
Translates to: KSVLKAAVTTERYIVFSINKLLA*FCLAWP
Trigger: GGGCCATGCCAGACAGAACAAAGCTAAAAGTTTATT...AATACTAAAAACTATGTACCTCTCAGTGGTGACAGCTGCTTTGAGAACTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGTTATGCACAGCAAGCTaGCTTCCAGATACAATGTCA +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQLCTAS*LPDTMS
Trigger: TGACATTGTATCTGGAAGCAAGCTTGCTGTGCATAA...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CAA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATTTCCGGTTCTGTAACTaGCTTCTCTTCTCCAAAAAT +
Preference number: 5 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHFRFCN*LLFSKN
Trigger: ATTTTTGGAGAAGAGAAGCAAGTTACAGAACCGGAA...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CAA 90 bp CACTGGCATACAAAATGTCTATGGCTAACAATGCTCTCGATTATGGTATGTCATGCAATTTACTATGCTTaGGTGAACAGCTGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: HWHTKCLWLTMLSIMVCHAIYYA*VNSCVS
Trigger: AGAAACACAGCTGTTCACCAAAGCATAGTAAATTGC...ATGACATACCATAATCGAGAGCATTGTTAGCCATAGACATTTTGTATGCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS GCA 90 bp ATACTTTCAACAATTATCTGTTCTTTTCCAACAGGAGCTGCATCTTaGTTTTGTTTCTCAGAGTCTCTCTGGAGAAAGGATTCATCTAGA +
Preference number: 5 (lower is better)
Translates to: ILSTIICSFPTGAAS*FCFSESLWRKDSSR
Trigger: TCTAGATGAATCCTTTCTCCAGAGAGACTCTGAGAAACAAAAGCAAGATGCAGCTCCTGTTGGAAAAGAACAGATAATTGTTGAAAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303697.8
ENST00000684477.1
CDS-3UTR CAA 90 bp TTGCACAGGCTAATTTCAGCTGGCATAAGCTTTTATAAGGATGCAAAAACAGAGTTTTCTTATTTGCAATaGGTAGTAAACGCCACTCCA +
Preference number: 5 (lower is better)
Translates to: LHRLISAGISFYKDAKTEFSYLQ*VVNATP
Trigger: TGGAGTGGCGTTTACTACCAATTGCAAATAAGAAAA...CTCTGTTTTTGCATCCTTATAAAAGCTTATGCCAGCTGAAATTAGCCTGTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CAA 90 bp TATCCCAGTATAACTCCATTTAATTTCACTCTGAGGATTGTAGTTTCTGAGCAGGAATATTTGTTTCTTTaGCTGAGCAATGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: YPSITPFNFTLRIVVSEQEYLFL*LSNGQV
Trigger: GACCTGTCCATTGCTCAGCAAAAGAAACAAATATTC...CTGCTCAGAAACTACAATCCTCAGAGTGAAATTAAATGGAGTTATACTGGGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406071.6
CDS-3UTR CAA 90 bp TTGCACAGGCTAATTTCAGCTGGCATAAGCTTTTATAAGGATGCAAAAACAGAGAGGGATCTCAATCATTaGATGCACAACATCATAGAA +
Preference number: 5 (lower is better)
Translates to: LHRLISAGISFYKDAKTERDLNH*MHNIIE
Trigger: TTCTATGATGTTGTGCATCAAATGATTGAGATCCCT...CTCTGTTTTTGCATCCTTATAAAAGCTTATGCCAGCTGAAATTAGCCTGTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS GCA 90 bp TCAAAATATATTTGTAAATTGGGTTTACAGTATTCCCATCCAAAGTaGCTTCAGGGCTACTTTGCTGTAATACTTCCATTGCTTCAGTCA +
Preference number: 5 (lower is better)
Translates to: SKYICKLGLQYSHPK*LQGYFAVILPLLQS
Trigger: TGACTGAAGCAATGGAAGTATTACAGCAAAGTAGCCCTGAAGGCACTTTGGATGGGAATACTGTAAACCCAATTTACAAATATATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS-3UTR CAA 90 bp AGACTGGAAGTTCCTCCAACAGGATTAGCTTCTTTAAATATTTTAAGTCCAGTGCTGGAATTTTCTTATTaGCAATTGGTAGTAAACGCC +
Preference number: 5 (lower is better)
Translates to: RLEVPPTGLASLNILSPVLEFSY*QLVVNA
Trigger: GGCGTTTACTACCAATTGCAAATAAGAAAATTCCAG...CACTGGACTTAAAATATTTAAAGAAGCTAATCCTGTTGGAGGAACTTCCAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS-3UTR CAA 90 bp GATAACTTTCACATAAAACTTGACCTTTCCCAAGTTGAAGTTCAGAAAACCATCATAGAAAGAACAGGCTaGGTTTTCCGTCTTTTGATA +
Preference number: 5 (lower is better)
Translates to: DNFHIKLDLSQVEVQKTIIERTG*VFRLLI
Trigger: TATCAAAAGACGGAAAACCAAGCCTGTTCTTTCTAT...GATGGTTTTCTGAACTTCAACTTGGGAAAGGTCAAGTTTTATGTGAAAGTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452803.1
CDS TCA 72 bp ATAGAGACCGCGTCGGGGTGGGCGGAGCGTCGCTTCTaGGCTGTGCCACGGCCACATCAGCTCGGCCAGAAA +
Preference number: 6 (lower is better)
Translates to: IETASGWAERRF*AVPRPHQLGQK
Trigger: TTTCTGGCCGAGCTGATGTGGCCGTGGCACAGCTCAGAAGCGACGCTCCGCCCACCCCGACGCGGTCTCTAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342355.8
CDS CCA 72 bp TCTCCACCAAAACCACCTCCATGCCTGATCGGAGATTaGGACCTTGAACCCCCAAGACTAGCTGAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: SPPKPPPCLIGD*DLEPPRLAEEQ
Trigger: CTGCTCCTCAGCTAGTCTTGGGGGTTCAAGGTCCCAATCTCCGATCAGGCATGGAGGTGGTTTTGGTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp GCTTCATGGGGTATATCTTCAGGTTCGAGGGCTTCCTaGCCGTCTGCCAAGAACACTCGTCTTGCGGCCATG +
Preference number: 6 (lower is better)
Translates to: ASWGISSGSRAS*PSAKNTRLAAM
Trigger: CATGGCCGCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAACCTGAAGATATACCCCATGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp CTGGGGGTGTACAGTGCTCTAGCTGGGTGGGTCATTTaGAGACGAGAGGAGCAGTCTTGCAGCAGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: LGVYSALAGWVI*RREEQSCSSSE
Trigger: TTCAGAGCTGCTGCAAGACTGCTCCTCTCGTCTCAAAATGACCCACCCAGCTAGAGCACTGTACACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp CTTCAGGTTCGAGGGCTTCCTTGCCGTCTGCCAAGAACACTCGTCTaGCGGCCATGTTCAGATTCAGCTTTTCTGTGCACTCCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: LQVRGLPCRLPRTLV*RPCSDSAFLCTPPA
Trigger: TGCTGGAGGAGTGCACAGAAAAGCTGAATCTGAACATGGCCGCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAACCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp GAGGGCTTCCTTGCCGTCTGCCAAGAACACTCGTCTTaGGGCCATGTTCAGATTCAGCTTTTCTGTGCACTC +
Preference number: 6 (lower is better)
Translates to: EGFLAVCQEHSS*GHVQIQLFCAL
Trigger: GAGTGCACAGAAAAGCTGAATCTGAACATGGCCGCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp CTTCATGGGGTATATCTTCAGGTTCGAGGGCTTCCTTaGCGTCTGCCAAGAACACTCGTCTTGCGGCCATGT +
Preference number: 6 (lower is better)
Translates to: LHGVYLQVRGLP*RLPRTLVLRPC
Trigger: ACATGGCCGCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAACCTGAAGATATACCCCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp CGAGGGCTTCCTTGCCGTCTGCCAAGAACACTCGTCTaGCGGCCATGTTCAGATTCAGCTTTTCTGTGCACT +
Preference number: 6 (lower is better)
Translates to: RGLPCRLPRTLV*RPCSDSAFLCT
Trigger: AGTGCACAGAAAAGCTGAATCTGAACATGGCCGCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp GGCTCTCCACTGGGGGTGTACAGTGCTCTAGCTGGGTGGGTCATTTaGAGACGAGAGGAGCAGTCTTGCAGCAGCTCTGAAATAGTTTTG +
Preference number: 6 (lower is better)
Translates to: GSPLGVYSALAGWVI*RREEQSCSSSEIVL
Trigger: CAAAACTATTTCAGAGCTGCTGCAAGACTGCTCCTCTCGTCTCAAAATGACCCACCCAGCTAGAGCACTGTACACCCCCAGTGGAGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS TCA 72 bp GTGCCCCCACAACCTGGCTTTCTCCCATCACCATGGTaGTTTGCTGAGTCATATCCTCAGCAGGTCTCAGAA +
Preference number: 6 (lower is better)
Translates to: VPPQPGFLPSPW*FAESYPQQVSE
Trigger: TTCTGAGACCTGCTGAGGATATGACTCAGCAAATCACCATGGTGATGGGAGAAAGCCAGGTTGTGGGGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406071.6
ENST00000483396.5
CDS GCA 72 bp GTGTGGCTGCCATGCCACTGTGAGATGCAGCTTGCGTaGAGGTCTTCATCCGTAAAGACAATAGACGTGCTT +
Preference number: 6 (lower is better)
Translates to: VWLPCHCEMQLA*RSSSVKTIDVL
Trigger: AAGCACGTCTATTGTCTTTACGGATGAAGACCTGCACGCAAGCTGCATCTCACAGTGGCATGGCAGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp GGGTATATCTTCAGGTTCGAGGGCTTCCTTGCCGTCTaGCAAGAACACTCGTCTTGCGGCCATGTTCAGATT +
Preference number: 6 (lower is better)
Translates to: GYIFRFEGFLAV*QEHSSCGHVQI
Trigger: AATCTGAACATGGCCGCAAGACGAGTGTTCTTGGCAGACGGCAAGGAAGCCCTCGAACCTGAAGATATACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp CAATTATTTTCACTGCCTTCTGGTGTGTGGCTGCCATaGCACTGTGAGATGCAGCTTGCGTGCAGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: QLFSLPSGVWLP*HCEMQLACRSS
Trigger: TGAAGACCTGCACGCAAGCTGCATCTCACAGTGGCATGGCAGCCACACACCAGAAGGCAGTGAAAATAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp GTATGCAATTATTTTCACTGCCTTCTGGTGTGTGGCTaGCATGCCACTGTGAGATGCAGCTTGCGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: VCNYFHCLLVCG*HATVRCSLRAG
Trigger: ACCTGCACGCAAGCTGCATCTCACAGTGGCATGGCAGCCACACACCAGAAGGCAGTGAAAATAATTGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp GAAATTGCCTTCCAAGTATTACCCCGTTATAGCTGGTaGCCCCACAACCTGGCTTTCTCCCATCACCATGGT +
Preference number: 6 (lower is better)
Translates to: EIAFQVLPRYSW*PHNLAFSHHHG
Trigger: ACCATGGTGATGGGAGAAAGCCAGGTTGTGGGGGCACCAGCTATAACGGGGTAATACTTGGAAGGCAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406071.6
ENST00000483396.5
CDS CCA 72 bp CATGGGAGGACTGCTCGGAACAAGCAGTCCTTGTATTaGCCAATCAAACTCCTCATTAAGTTGGCCACTGGG +
Preference number: 6 (lower is better)
Translates to: HGRTARNKQSLY*PIKLLIKLATG
Trigger: CCCAGTGGCCAACTTAATGAGGAGTTTGATTGGCCAATACAAGGACTGCTTGTTCCGAGCAGTCCTCCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406071.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp AGCTGGTGCCCCCACAACCTGGCTTTCTCCCATCACCATGGTGATTaGCTGAGTCATATCCTCAGCAGGTCTCAGAAGGTATACTGTAAA +
Preference number: 6 (lower is better)
Translates to: SWCPHNLAFSHHHGD*LSHILSRSQKVYCK
Trigger: TTTACAGTATACCTTCTGAGACCTGCTGAGGATATGACTCAGCAAATCACCATGGTGATGGGAGAAAGCCAGGTTGTGGGGGCACCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406071.6
ENST00000483396.5
CDS CAA 90 bp TCCATCTTTGGTATATACTTTGGAGGCTGCTCTGGCAAGCCCAAGTaGTTCCGTGCATTCTGTAAGAAGCATGGGGAATGTTCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: SIFGIYFGGCSGKPK*FRAFCKKHGECSSH
Trigger: GTGGCTGGAACATTCCCCATGCTTCTTACAGAATGCACGGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp GTGTGCCTCTGTATGTCTTATAAGTTCCATGAGTTTAATTTCCTGTaGAGTCTGTTCGGTCCAGCCTCCTTCAACCACCACGGGCTGCAC +
Preference number: 6 (lower is better)
Translates to: VCLCMSYKFHEFNFL*SLFGPASFNHHGLH
Trigger: GTGCAGCCCGTGGTGGTTGAAGGAGGCTGGACCGAACAGACTCAACAGGAAATTAAACTCATGGAACTTATAAGACATACAGAGGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CCA 72 bp AAAGAAATTGCCTTCCAAGTATTACCCCGTTATAGCTaGTGCCCCCACAACCTGGCTTTCTCCCATCACCAT +
Preference number: 6 (lower is better)
Translates to: KEIAFQVLPRYS*CPHNLAFSHHH
Trigger: ATGGTGATGGGAGAAAGCCAGGTTGTGGGGGCACCAGCTATAACGGGGTAATACTTGGAAGGCAATTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406071.6
ENST00000483396.5
CDS CCA 72 bp TCCATTCTGCAAAACTCTGAGTCGCACAGGGGCATATaGCTCTGTTGTCTTACAGATGGGTTTCTTCATGGG +
Preference number: 6 (lower is better)
Translates to: SILQNSESHRGI*LCCLTDGFLHG
Trigger: CCCATGAAGAAACCCATCTGTAAGACAACAGAGCCATATGCCCCTGTGCGACTCAGAGTTTTGCAGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000437348.5
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp GGTATATACTTTGGAGGCTGCTCTGGCAAGCCCAAGTaGTTCCGTGCATTCTGTAAGAAGCATGGGGAATGT +
Preference number: 6 (lower is better)
Translates to: GIYFGGCSGKPK*FRAFCKKHGEC
Trigger: ACATTCCCCATGCTTCTTACAGAATGCACGGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp GCCCATAAAACCAAATCACGCAAGGTAAAGATTGGGGTTCCATCTTaGGTATATACTTTGGAGGCTGCTCTGGCAAGCCCAAGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: AHKTKSRKVKIGVPS*VYTLEAALASPSCS
Trigger: GGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGATGGAACCCCAATCTTTACCTTGCGTGATTTGGTTTTATGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp CTGTTGTCTTACAGATGGGTTTCTTCATGGGAGGACTaGTCGGAACAAGCAGTCCTTGTATTGGCCAATCAA +
Preference number: 6 (lower is better)
Translates to: LLSYRWVSSWED*SEQAVLVLANQ
Trigger: TTGATTGGCCAATACAAGGACTGCTTGTTCCGAGCAGTCCTCCCATGAAGAAACCCATCTGTAAGACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000437348.5
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CCA 72 bp CATATGGCTCTGTTGTCTTACAGATGGGTTTCTTCATaGGAGGACTGCTCGGAACAAGCAGTCCTTGTATTG +
Preference number: 6 (lower is better)
Translates to: HMALLSYRWVSS*EDCSEQAVLVL
Trigger: CAATACAAGGACTGCTTGTTCCGAGCAGTCCTCCCATGAAGAAACCCATCTGTAAGACAACAGAGCCATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000437348.5
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CCA 72 bp CATCAAAGTCATGTGAAGTTTCCTGCCAGGCATACCTaGGAAGTGTGTGACAAGCCTTCATTCGAAGATGAG +
Preference number: 6 (lower is better)
Translates to: HQSHVKFPARHT*EVCDKPSFEDE
Trigger: CTCATCTTCGAATGAAGGCTTGTCACACACTTCCCAGGTATGCCTGGCAGGAAACTTCACATGACTTTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp AAGGTAAAGATTGGGGTTCCATCTTTGGTATATACTTaGGAGGCTGCTCTGGCAAGCCCAAGTTGTTCCGTG +
Preference number: 6 (lower is better)
Translates to: KVKIGVPSLVYT*EAALASPSCSV
Trigger: CACGGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGATGGAACCCCAATCTTTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp ACCAAATCACGCAAGGTAAAGATTGGGGTTCCATCTTaGGTATATACTTTGGAGGCTGCTCTGGCAAGCCCA +
Preference number: 6 (lower is better)
Translates to: TKSRKVKIGVPS*VYTLEAALASP
Trigger: TGGGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGATGGAACCCCAATCTTTACCTTGCGTGATTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp TTTCTTCATGGGAGGACTGCTCGGAACAAGCAGTCCTaGTATTGGCCAATCAAACTCCTCATTAAGTTGGCC +
Preference number: 6 (lower is better)
Translates to: FLHGRTARNKQS*YWPIKLLIKLA
Trigger: GGCCAACTTAATGAGGAGTTTGATTGGCCAATACAAGGACTGCTTGTTCCGAGCAGTCCTCCCATGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406071.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp AAATCACGCAAGGTAAAGATTGGGGTTCCATCTTTGGTATATACTTaGGAGGCTGCTCTGGCAAGCCCAAGTTGTTCCGTGCATTCTGTA +
Preference number: 6 (lower is better)
Translates to: KSRKVKIGVPSLVYT*EAALASPSCSVHSV
Trigger: TACAGAATGCACGGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGATGGAACCCCAATCTTTACCTTGCGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp TCCCATCCAAAGTGCCTTCAGGGCTACTTTGCTGTAATACTTCCATaGCTTCAGTCAAGAGGGATAAGGAAGACTGAGATAGTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: SHPKCLQGYFAVILP*LQSRGIRKTEIVLL
Trigger: GAGAAGCACTATCTCAGTCTTCCTTATCCCTCTTGACTGAAGCAATGGAAGTATTACAGCAAAGTAGCCCTGAAGGCACTTTGGATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp TCCATCTTTGGTATATACTTTGGAGGCTGCTCTGGCAAGCCCAAGTaGTTCCGTGCATTCTGTAAGAAGCTAGATAACACAGGCAGTAAG +
Preference number: 6 (lower is better)
Translates to: SIFGIYFGGCSGKPK*FRAFCKKLDNTGSK
Trigger: CTTACTGCCTGTGTTATCTAGCTTCTTACAGAATGCACGGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATATACCAAAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483396.5
CDS TCA 72 bp TTTCTTTGGAAGACTGTCATCCTCATCAAAGTCATGTaGAGTTTCCTGCCAGGCATACCTGGGAAGTGTGTG +
Preference number: 6 (lower is better)
Translates to: FLWKTVILIKVM*SFLPGIPGKCV
Trigger: CACACACTTCCCAGGTATGCCTGGCAGGAAACTTCACATGACTTTGATGAGGATGACAGTCTTCCAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp TTCAGCCAAAGAGGTGAGGGAATAGATATGTGCGCTTaGAAGGAAGTCTGCAGGGTAACTCCATATCATATC +
Preference number: 6 (lower is better)
Translates to: FSQRGEGIDMCA*KEVCRVTPYHI
Trigger: GATATGATATGGAGTTACCCTGCAGACTTCCTTGCAAGCGCACATATCTATTCCCTCACCTCTTTGGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483396.5
CDS CAA 72 bp GGTATATACTTTGGAGGCTGCTCTGGCAAGCCCAAGTaGTTCCGTGCATTCTGTAAGAAGCTAGATAACACA +
Preference number: 6 (lower is better)
Translates to: GIYFGGCSGKPK*FRAFCKKLDNT
Trigger: TGTGTTATCTAGCTTCTTACAGAATGCACGGAACAACTTGGGCTTGCCAGAGCAGCCTCCAAAGTATATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483396.5
CDS TCA 72 bp GTCCAAGACCATAAAAGCCAGCTGTGGATCCCTGGGTaGATCTTGGAGTTGCTAACTTCTGTATTTTGCTTA +
Preference number: 6 (lower is better)
Translates to: VQDHKSQLWIPG*ILELLTSVFCL
Trigger: TAAGCAAAATACAGAAGTTAGCAACTCCAAGATTCACCCAGGGATCCACAGCTGGCTTTTATGGTCTTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483396.5
CDS TCA 72 bp GTAAACAGAGATCTTCATCTCATCAGCTTTAACTGGTaGATCTGGCCAGGGACATTTATCACTCAATCCCAC +
Preference number: 6 (lower is better)
Translates to: VNRDLHLISFNW*IWPGTFITQSH
Trigger: GTGGGATTGAGTGATAAATGTCCCTGGCCAGATTCACCAGTTAAAGCTGATGAGATGAAGATCTCTGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483396.5
CDS TCA 72 bp TCAACACATAAATGCCCAGATACTCCAGATGGTGAATaGGGTGGCATCTCTTGGATGATTCAGATGACATAC +
Preference number: 6 (lower is better)
Translates to: STHKCPDTPDGE*GGISWMIQMTY
Trigger: GTATGTCATCTGAATCATCCAAGAGATGCCACCTCATTCACCATCTGGAGTATCTGGGCATTTATGTGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483396.5
CDS GCA 72 bp GGTGAGGGAATAGATATGTGCGCTTGCAAGGAAGTCTaGAGGGTAACTCCATATCATATCAAATATCACTTG +
Preference number: 6 (lower is better)
Translates to: GEGIDMCACKEV*RVTPYHIKYHL
Trigger: CAAGTGATATTTGATATGATATGGAGTTACCCTGCAGACTTCCTTGCAAGCGCACATATCTATTCCCTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483396.5
CDS GCA 72 bp AATATTTTCAGCCAAAGAGGTGAGGGAATAGATATGTaGGCTTGCAAGGAAGTCTGCAGGGTAACTCCATAT +
Preference number: 6 (lower is better)
Translates to: NIFSQRGEGIDM*ACKEVCRVTPY
Trigger: ATATGGAGTTACCCTGCAGACTTCCTTGCAAGCGCACATATCTATTCCCTCACCTCTTTGGCTGAAAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483396.5
CDS CAA 72 bp AAGTGCCTTCAGGGCTACTTTGCTGTAATACTTCCATaGCTTCAGTCAAGAGGGATAAGGAAGACTGAGATA +
Preference number: 6 (lower is better)
Translates to: KCLQGYFAVILP*LQSRGIRKTEI
Trigger: TATCTCAGTCTTCCTTATCCCTCTTGACTGAAGCAATGGAAGTATTACAGCAAAGTAGCCCTGAAGGCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS TCA 72 bp GTTTTGTGTTGGGCTGCTTATACAGGTTGCTCGGCTTaGCTGCTATACGTTTGGTTGCAATTGGAAAATTTA +
Preference number: 6 (lower is better)
Translates to: VLCWAAYTGCSA*LLYVWLQLENL
Trigger: TAAATTTTCCAATTGCAACCAAACGTATAGCAGTCAAGCCGAGCAACCTGTATAAGCAGCCCAACACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS TCA 72 bp TTTGTTTCTTTTGCTGAGCAATGGACAGGTCAGGATTaGTCCAGAGTTCTCCACATGAAACATACACCAGTT +
Preference number: 6 (lower is better)
Translates to: FVSFAEQWTGQD*SRVLHMKHTPV
Trigger: AACTGGTGTATGTTTCATGTGGAGAACTCTGGATCAATCCTGACCTGTCCATTGCTCAGCAAAAGAAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS TCA 72 bp GATTCTAGGTTCCTCAGGAATATTTGTTTCTTTTGCTaGGCAATGGACAGGTCAGGATTGATCCAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: DSRFLRNICFFC*AMDRSGLIQSS
Trigger: AGAACTCTGGATCAATCCTGACCTGTCCATTGCTCAGCAAAAGAAACAAATATTCCTGAGGAACCTAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS TCA 72 bp CTGCCCCATGCCATTCTTAAAGAACAGAATTCGGACTaGGGTCCTCTCAGTAAGTTTCTTCATTCTAATAGA +
Preference number: 6 (lower is better)
Translates to: LPHAILKEQNSD*GPLSKFLHSNR
Trigger: TCTATTAGAATGAAGAAACTTACTGAGAGGACCTCAGTCCGAATTCTGTTCTTTAAGAATGGCATGGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp TATCTGTTCTTTTCCAACAGGAGCTGCATCTTGCTTTaGTTTCTCAGAGTCTCTCTGGAGAAAGGATTCATC +
Preference number: 6 (lower is better)
Translates to: YLFFSNRSCILL*FLRVSLEKGFI
Trigger: GATGAATCCTTTCTCCAGAGAGACTCTGAGAAACAAAAGCAAGATGCAGCTCCTGTTGGAAAAGAACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp ACCCAGATGGCAATAGGATTTCTGAGGATGAGGGTAAGCAAAGACTaGTCTATACCATCCAAACTATCGGATGTCACAGATTTTGCAAAT +
Preference number: 6 (lower is better)
Translates to: TQMAIGFLRMRVSKD*SIPSKLSDVTDFAN
Trigger: ATTTGCAAAATCTGTGACATCCGATAGTTTGGATGGTATAGACAAGTCTTTGCTTACCCTCATCCTCAGAAATCCTATTGCCATCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp GAGGTCCTCTCAGTAAGTTTCTTCATTCTAATAGAAAGAACAGGCTaGGTTTTCCGTCTTTTGATATCAGTAGGAAGCATCAACCCATTC +
Preference number: 6 (lower is better)
Translates to: EVLSVSFFILIERTG*VFRLLISVGSINPF
Trigger: GAATGGGTTGATGCTTCCTACTGATATCAAAAGACGGAAAACCAAGCCTGTTCTTTCTATTAGAATGAAGAAACTTACTGAGAGGACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp ACAATTATCTGTTCTTTTCCAACAGGAGCTGCATCTTaGTTTTGTTTCTCAGAGTCTCTCTGGAGAAAGGAT +
Preference number: 6 (lower is better)
Translates to: TIICSFPTGAAS*FCFSESLWRKD
Trigger: ATCCTTTCTCCAGAGAGACTCTGAGAAACAAAAGCAAGATGCAGCTCCTGTTGGAAAAGAACAGATAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp TGTGTTGGGCTGCTTATACAGGTTGCTCGGCTTGACTaGTATACGTTTGGTTGCAATTGGAAAATTTATTTT +
Preference number: 6 (lower is better)
Translates to: CVGLLIQVARLD*YTFGCNWKIYF
Trigger: AAAATAAATTTTCCAATTGCAACCAAACGTATAGCAGTCAAGCCGAGCAACCTGTATAAGCAGCCCAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp ATTTGTAAATTGGGTTTACAGTATTCCCATCCAAAGTaGCTTCAGGGCTACTTTGCTGTAATACTTCCATTG +
Preference number: 6 (lower is better)
Translates to: ICKLGLQYSHPK*LQGYFAVILPL
Trigger: CAATGGAAGTATTACAGCAAAGTAGCCCTGAAGGCACTTTGGATGGGAATACTGTAAACCCAATTTACAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342355.8
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS GCA 72 bp ATGAATGCATCAAAGTTTCCAAATTGTTGCCATACATaGATTAGCAGAGCTCAGATCATTACATACCTCAGC +
Preference number: 6 (lower is better)
Translates to: MNASKFPNCCHT*ISRAQIITYLS
Trigger: GCTGAGGTATGTAATGATCTGAGCTCTGCTAATGCATGTATGGCAACAATTTGGAAACTTTGATGCATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429306.2
CDS CAA 72 bp TCTCCAAAAATTGCTACAGGTTTATGCACAGCAAGCTaGCTTCCAGATACAATGTCACTTTGGACTTCTAAA +
Preference number: 6 (lower is better)
Translates to: SPKIATGLCTAS*LPDTMSLWTSK
Trigger: TTTAGAAGTCCAAAGTGACATTGTATCTGGAAGCAAGCTTGCTGTGCATAAACCTGTAGCAATTTTTGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp TGCTTATACAGGTTGCTCGGCTTGACTGCTATACGTTaGGTTGCAATTGGAAAATTTATTTTGGATTCCATT +
Preference number: 6 (lower is better)
Translates to: CLYRLLGLTAIR*VAIGKFILDSI
Trigger: AATGGAATCCAAAATAAATTTTCCAATTGCAACCAAACGTATAGCAGTCAAGCCGAGCAACCTGTATAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303697.8
ENST00000406071.6
ENST00000444572.6
ENST00000483396.5
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp ATTCTAATAGAAAGAACAGGCTTGGTTTTCCGTCTTTaGATATCAGTAGGAAGCATCAACCCATTCATTGTC +
Preference number: 6 (lower is better)
Translates to: ILIERTGLVFRL*ISVGSINPFIV
Trigger: GACAATGAATGGGTTGATGCTTCCTACTGATATCAAAAGACGGAAAACCAAGCCTGTTCTTTCTATTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS CAA 90 bp AGTTTCTTCATTCTAATAGAAAGAACAGGCTTGGTTTTCCGTCTTTaGATATCAGTAGGAAGCATCAACCCATTCATTGTCCAAGTTACT +
Preference number: 6 (lower is better)
Translates to: SFFILIERTGLVFRL*ISVGSINPFIVQVT
Trigger: AGTAACTTGGACAATGAATGGGTTGATGCTTCCTACTGATATCAAAAGACGGAAAACCAAGCCTGTTCTTTCTATTAGAATGAAGAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1
CDS CAA 72 bp TCAGTAAGTTTCTTCATTCTAATAGAAAGAACAGGCTaGGTTTTCCGTCTTTTGATATCAGTAGGAAGCATC +
Preference number: 6 (lower is better)
Translates to: SVSFFILIERTG*VFRLLISVGSI
Trigger: GATGCTTCCTACTGATATCAAAAGACGGAAAACCAAGCCTGTTCTTTCTATTAGAATGAAGAAACTTACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452803.1
ENST00000597505.5
ENST00000684477.1