RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCC (Homo sapiens)

Ensembl gene IDs: ENSG00000187323

Ensembl transcript IDs: ENST00000304775.12, ENST00000412726.5, ENST00000442544.7, ENST00000577224.1, ENST00000578080.1, ENST00000578949.1, ENST00000579349.1, ENST00000579666.1, ENST00000579702.1, ENST00000579883.1, ENST00000579941.1, ENST00000580024.1, ENST00000580146.1, ENST00000581559.1, ENST00000581580.5, ENST00000582595.1, ENST00000582875.1, ENST00000584710.5

Found 1131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGCTGAGCATCGGTAAATTCCAATGTCCCCCGGTTGGAGTCGGCTaGTCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCAC +
Preference number: 1 (lower is better)
Translates to: ELSIGKFQCPPVGVG*SAMLQRARPPLGSH
Trigger: GTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGGGGGACATTGGAATTTACCGATGCTCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579349.1
3UTR GCA 90 bp TCGGTAAATTCCAATGTCCCCCGGTTGGAGTCGGCTGATCTGCAATaGTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGG +
Preference number: 1 (lower is better)
Translates to: SVNSNVPRLESADLQ*SRGQDHHSGVTWDW
Trigger: CCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGGGGGACATTGGAATTTACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579349.1
3UTR CCA 90 bp AGAAGACAGGCGACATTGGCCAGTGCACCATATGACATGTGGAGCTaGCCATTTCACCCAACGCTAGTTGCCAAGGAGAACTCAGGGAGG +
Preference number: 1 (lower is better)
Translates to: RRQATLASAPYDMWS*PFHPTLVAKENSGR
Trigger: CCTCCCTGAGTTCTCCTTGGCAACTAGCGTTGGGTGAAATGGCCAGCTCCACATGTCATATGGTGCACTGGCCAATGTCGCCTGTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp AAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTaGTTCTTCTGCCAGTGGATTGTTGGCATGGGCTCCCCAATGACT +
Preference number: 1 (lower is better)
Translates to: KTTTRESPGIGVRSC*FFCQWIVGMGSPMT
Trigger: AGTCATTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CCA 90 bp CAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTaGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGCAT +
Preference number: 1 (lower is better)
Translates to: QCSRGQDHHSGVTWD*SQVLLVLLPVDCWH
Trigger: ATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CCA 90 bp GATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTaGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGT +
Preference number: 1 (lower is better)
Translates to: DLQCSRGQDHHSGVT*DWSQVLLVLLPVDC
Trigger: ACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR GCA 90 bp ACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTaGCAGTGGATTGTTGGCATGGGCTCCCCAATGACTTCACACTTG +
Preference number: 1 (lower is better)
Translates to: TRESPGIGVRSCWFF*QWIVGMGSPMTSHL
Trigger: CAAGTGTGAAGTCATTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CCA 90 bp GGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGACATGTaGAGCTGGCCATTTCACCCAACGCTAGTTGCCAAGGAGAACTCA +
Preference number: 1 (lower is better)
Translates to: GIRRQATLASAPYDM*SWPFHPTLVAKENS
Trigger: TGAGTTCTCCTTGGCAACTAGCGTTGGGTGAAATGGCCAGCTCCACATGTCATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp CTCAGGGAGTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTaGCCAGTGCACCATATGACATGTGGAGCTGGCCATTTCACCCAA +
Preference number: 1 (lower is better)
Translates to: LRESAISTGLEDRRH*PVHHMTCGAGHFTQ
Trigger: TTGGGTGAAATGGCCAGCTCCACATGTCATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGACTCCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp GAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTaGATTGTTGGCATGGGCTCCCCAATGACTTCACACTTGAGTAGC +
Preference number: 1 (lower is better)
Translates to: ESPGIGVRSCWFFCQ*IVGMGSPMTSHLSS
Trigger: GCTACTCAAGTGTGAAGTCATTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CCA 90 bp AGTTCTGGTGGCAGAGCGGCTGGTTGGCTGTCAGGTATCACCCAATaGGAATCAGAGAGAGTTATGAGCATAAAGAGTCCTGGATACCAT +
Preference number: 1 (lower is better)
Translates to: SSGGRAAGWLSGITQ*ESERVMSIKSPGYH
Trigger: ATGGTATCCAGGACTCTTTATGCTCATAACTCTCTCTGATTCCCATTGGGTGATACCTGACAGCCAACCAGCCGCTCTGCCACCAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp CTTCTTTTTCAGGGAGAAATGAGTTCTGGTGGCAGAGCGGCTGGTTaGCTGTCAGGTATCACCCAATGGGAATCAGAGAGAGTTATGAGC +
Preference number: 1 (lower is better)
Translates to: LLFQGEMSSGGRAAG*LSGITQWESERVMS
Trigger: GCTCATAACTCTCTCTGATTCCCATTGGGTGATACCTGACAGCCAACCAGCCGCTCTGCCACCAGAACTCATTTCTCCCTGAAAAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 90 bp TTGAATGACCCTAAAAAGGGAGAAGTGGCGATGATGGAACTTCAGTaGAGGCTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGG +
Preference number: 1 (lower is better)
Translates to: LNDPKKGEVAMMELQ*RLCLDWTSLHTQQW
Trigger: CCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAGCCTTCACTGAAGTTCCATCATCGCCACTTCTCCCTTTTTAGGGTCATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR GCA 90 bp GGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAGGCTAGTTTaGAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGG +
Preference number: 1 (lower is better)
Translates to: GYHELDSVGGSQRLV*SIHRFLLVKRSGDW
Trigger: CCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp ACTCAGCAATGGACAATTCATTTCCAAAGTGGTCCCTCTGAGGTATaGAACACTGCAGCTTTAACAGCCGTATCTAGATCCCAACCAGAT +
Preference number: 1 (lower is better)
Translates to: TQQWTIHFQSGPSEV*NTAALTAVSRSQPD
Trigger: ATCTGGTTGGGATCTAGATACGGCTGTTAAAGCTGCAGTGTTCCATACCTCAGAGGGACCACTTTGGAAATGAATTGTCCATTGCTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp CACTGGTTAGAGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTaGTATGCTGCAAAGTTCCCGGAAAATTCACCTCATCCATTCAGA +
Preference number: 1 (lower is better)
Translates to: HWLEFLDTGVLFMGN*YAAKFPENSPHPFR
Trigger: TCTGAATGGATGAGGTGAATTTTCCGGGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACTCTAACCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 90 bp ATGGGAATCAGAGAGAGTTATGAGCATAAAGAGTCCTGGATACCATaGACTAGACTCAGTAGGAGGAAGTCAGAGGCTAGTTTGCAGTAT +
Preference number: 1 (lower is better)
Translates to: MGIRESYEHKESWIP*TRLSRRKSEASLQY
Trigger: ATACTGCAAACTAGCCTCTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCATAACTCTCTCTGATTCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 90 bp TTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATGGTCCAGGTaGAAAGAGGAATATAAAGTAATGACTGACATGTCTAACAGACAG +
Preference number: 1 (lower is better)
Translates to: LIVTPVSASSGVWSR*KEEYKVMTDMSNRQ
Trigger: CTGTCTGTTAGACATGTCAGTCATTACTTTATATTCCTCTTTTCACCTGGACCATACACCTGATGAAGCAGACACTGGCGTGACGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR TCA 90 bp ATTCTTCTGGCCAAACTCCTAAGGAAGATGGCCTTAGTGAAGCTTTaGAATTGTATCACAGTGTGGTATGGCACAAAAGCCACCCAAATT +
Preference number: 1 (lower is better)
Translates to: ILLAKLLRKMALVKL*NCITVWYGTKATQI
Trigger: AATTTGGGTGGCTTTTGTGCCATACCACACTGTGATACAATTTCAAAGCTTCACTAAGGCCATCTTCCTTAGGAGTTTGGCCAGAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp TGTCTGAAACATCACACTAGCACAGGATGGCTCTCCTTGTGTAGCTaGAACCAAAGCAGGAGATTGAACATACACCTAATTTTGAATAAT +
Preference number: 1 (lower is better)
Translates to: CLKHHTSTGWLSLCS*NQSRRLNIHLILNN
Trigger: ATTATTCAAAATTAGGTGTATGTTCAATCTCCTGCTTTGGTTCCAGCTACACAAGGAGAGCCATCCTGTGCTAGTGTGATGTTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp ATTTTAGTTTCAGAATGTTGTCTGAAACATCACACTAGCACAGGATaGCTCTCCTTGTGTAGCTGGAACCAAAGCAGGAGATTGAACATA +
Preference number: 1 (lower is better)
Translates to: ILVSECCLKHHTSTG*LSLCSWNQSRRLNI
Trigger: TATGTTCAATCTCCTGCTTTGGTTCCAGCTACACAAGGAGAGCCATCCTGTGCTAGTGTGATGTTTCAGACAACATTCTGAAACTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR GCA 90 bp GTGTCTGAGAAGATTGCATATTATATCCTCTTTCCAGAAATGTACTaGTGCTGGCAGAATGCCACTAGTTGCAGATTTTTATATTCCTGG +
Preference number: 1 (lower is better)
Translates to: VSEKIAYYILFPEMY*CWQNATSCRFLYSW
Trigger: CCAGGAATATAAAAATCTGCAACTAGTGGCATTCTGCCAGCAGCAGTACATTTCTGGAAAGAGGATATAATATGCAATCTTCTCAGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp TACTGCTGCTGGCAGAATGCCACTAGTTGCAGATTTTTATATTCCTaGACTCCAGACATACATATTAACCAAGGGTGGATTTACAAATAC +
Preference number: 1 (lower is better)
Translates to: YCCWQNATSCRFLYS*TPDIHINQGWIYKY
Trigger: GTATTTGTAAATCCACCCTTGGTTAATATGTATGTCTGGAGTCCAGGAATATAAAAATCTGCAACTAGTGGCATTCTGCCAGCAGCAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR GCA 90 bp TCTGAGAAGATTGCATATTATATCCTCTTTCCAGAAATGTACTGCTaGTGGCAGAATGCCACTAGTTGCAGATTTTTATATTCCTGGACT +
Preference number: 1 (lower is better)
Translates to: SEKIAYYILFPEMYC*WQNATSCRFLYSWT
Trigger: AGTCCAGGAATATAAAAATCTGCAACTAGTGGCATTCTGCCAGCAGCAGTACATTTCTGGAAAGAGGATATAATATGCAATCTTCTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp TGGCAACGAAGAGTCCAGATGAGTAGTAATATTCATTTGCTGATATaGGTGTGGTATTTTGTCTTTTACATAACCTCACTGACCAGGAAA +
Preference number: 1 (lower is better)
Translates to: WQRRVQMSSNIHLLI*VWYFVFYITSLTRK
Trigger: TTTCCTGGTCAGTGAGGTTATGTAAAAGACAAAATACCACACCCATATCAGCAAATGAATATTACTACTCATCTGGACTCTTCGTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 90 bp TTTACTTTTTGTGCTGTAAGGAAAACATCCAATCCTTTGGTGCTATaGCATGAGAGATTCCCATGGGTGCTTTGTATGTTTAAGTTGAAA +
Preference number: 1 (lower is better)
Translates to: FTFCAVRKTSNPLVL*HERFPWVLCMFKLK
Trigger: TTTCAACTTAAACATACAAAGCACCCATGGGAATCTCTCATGCCATAGCACCAAAGGATTGGATGTTTTCCTTACAGCACAAAAAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 90 bp TTGAAATTGTATCACAGTGTGGTATGGCACAAAAGCCACCCAAATTaGAAACTGTCCTATTACAAGCTTAAGCATATAATTACCATGTGT +
Preference number: 1 (lower is better)
Translates to: LKLYHSVVWHKSHPN*KLSYYKLKHIITMC
Trigger: ACACATGGTAATTATATGCTTAAGCTTGTAATAGGACAGTTTTCAATTTGGGTGGCTTTTGTGCCATACCACACTGTGATACAATTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CCCCGGTTGGAGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGTGGTTCTTCTGCCAGTaGATTGTTGGCATGGGCTCC +
Preference number: 2 (lower is better)
Translates to: PRLESADLQCSRGQDHHSWFFCQ*IVGMGS
Trigger: GGAGCCCATGCCAACAATCCACTGGCAGAAGAACCA...CGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR-3UTR CCA 90 bp CATGGCCCAAGTTTCCATTCCTTGGAATCCATGAGGCCAAGAACCCCAGGTCAGGGCTTGCTGCCATCTTaGGAGTGGCCTGCCGCCATC +
Preference number: 2 (lower is better)
Translates to: HGPSFHSLESMRPRTPGQGLLPS*EWPAAI
Trigger: GATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCC...CTGACCTGGGGTTCTTGGCCTCATGGATTCCAAGGAATGGAAACTTGGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579349.1
3UTR CAA 90 bp GGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTaGTTGGTTCTTCTGCCAGTGGATTGTTGGCATGGGCTCCCCAAT +
Preference number: 2 (lower is better)
Translates to: GQDHHSGVTWDWSQV*LVLLPVDCWHGLPN
Trigger: ATTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CAA 90 bp CAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTaGGTTCTTCTGCCAGTGGATTGTTGGCATGGGCTCCCCAATGAC +
Preference number: 2 (lower is better)
Translates to: QDHHSGVTWDWSQVL*VLLPVDCWHGLPND
Trigger: GTCATTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CAA 90 bp GCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATaGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGCA +
Preference number: 2 (lower is better)
Translates to: AMLQRARPPLGSHLG*ESGLVGSSASGLLA
Trigger: TGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR-3UTR CCA 90 bp TCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGGAGTCAGGTCTTGTTaGTTCTTCTGCCAGTGGATT +
Preference number: 2 (lower is better)
Translates to: SADLQCSRGQDHHSGVTWGVRSC*FFCQWI
Trigger: AATCCACTGGCAGAAGAACCAACAAGACCTGACTCC...CCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR-3UTR CCA 90 bp AGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGAGTCACCTGGGATTaGAGTCAGGTCTTGTTGGTT +
Preference number: 2 (lower is better)
Translates to: SRLICNAPEGKTTTRESPGVTWD*SQVLLV
Trigger: AACCAACAAGACCTGACTCCAATCCCAGGTGACTCC...AGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR-3UTR GCA 90 bp GGGAGGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGGCATGTGCAGTCATaGTCCAAGTACTGGACCTTC +
Preference number: 2 (lower is better)
Translates to: GRLPTHNDGTRLPFPSNDWHVQS*SKYWTF
Trigger: GAAGGTCCAGTACTTGGAGCATGACTGCACATGCCA...GTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR-3UTR GCA 90 bp AGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTTCTTGTTGGTTCTTCTaGCAGTGGATTGTTGGCATG +
Preference number: 2 (lower is better)
Translates to: SRLICNAPEGKTTTRESPSCWFF*QWIVGM
Trigger: CATGCCAACAATCCACTGGCAGAAGAACCAACAAGA...AGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR-3UTR CCA 90 bp ATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGAGCACTGCTTCATACGTGGTaGCATGTGCAGTCATGCTCC +
Preference number: 2 (lower is better)
Translates to: MTARGFPSLVMTVKSLGALLHTW*HVQSCS
Trigger: GGAGCATGACTGCACATGCCACCACGTATGAAGCAG...TGCTCCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGTCGGAAGTGTCAGGTaGCACCTGCCCCTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVVGSVR*HLPLCF
Trigger: GAAGCAGAGGGGCAGGTGCCACCTGACACTTCCGAC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CAA 90 bp TCTCAGGGAGTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATaGGCCAGTGCACCATATGACATGTGGAGCTGGCCATTTCACCCA +
Preference number: 2 (lower is better)
Translates to: SQGVCHFYGIRRQAT*ASAPYDMWSWPFHP
Trigger: TGGGTGAAATGGCCAGCTCCACATGTCATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGACTCCCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCATGGTCTCCCCAGCAATaGTTGGGCTGTAGAAAAATG +
Preference number: 2 (lower is better)
Translates to: HHSGVTWDWSQVLLVLLPWSPQQ*LGCRKM
Trigger: CATTTTTCTACAGCCCAATCATTGCTGGGGAGACCA...TGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581559.1
3UTR-3UTR GCA 90 bp GGAGGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTATACGTGGTGGCATGTaGAGTCATGCTCCAAGTACT +
Preference number: 2 (lower is better)
Translates to: GGCQLTMTARGFPSLVMTIRGGM*SHAPST
Trigger: AGTACTTGGAGCATGACTGCACATGCCACCACGTAT...AGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGGGTCTGGTGGCCAATaGTTGCCAACACTGACCCTG +
Preference number: 2 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVGSGGQ*LPTLTL
Trigger: CAGGGTCAGTGTTGGCAAGCATTGGCCACCAGACCC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CAA 90 bp TTCTGCCAGTGGATTGTTGGCATGGGCTCCCCAATGACTTCACACTaGAGTAGCACTGTGTCTCCCATGAAGGCTGTGACAGATTCTGTC +
Preference number: 2 (lower is better)
Translates to: FCQWIVGMGSPMTSH*SSTVSPMKAVTDSV
Trigger: GACAGAATCTGTCACAGCCTTCATGGGAGACACAGTGCTACTCAAGTGTGAAGTCATTGGGGAGCCCATGCCAACAATCCACTGGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATAGTGGTCCTGATGGGTaGCCTGTACACTGGTTAGAG +
Preference number: 2 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSGPDG*PVHWLE
Trigger: CTCTAACCAGTGTACAGGTCACCCATCAGGACCACT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGAGCTTGCACTGGTTTaGCATGGCATGGTACAGGCT +
Preference number: 2 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEELALV*HGMVQA
Trigger: AGCCTGTACCATGCCATGGCAAACCAGTGCAAGCTC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp TTTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCCTTGGGAGCAGAGGTaGGGGCTGCTTCATACGTGG +
Preference number: 2 (lower is better)
Translates to: FPLKKIYIFLIRAAASAKPWEQR*GLLHTW
Trigger: CCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGG...CTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR CAA 90 bp TGTGAAAGGAACCTCAGTGGTCCACATGGCCCAAGTTTCCATTCCTaGGAATCCATGAGGCCAAGAACCCCAGGTCAGAGAATAAAAGGC +
Preference number: 2 (lower is better)
Translates to: CERNLSGPHGPSFHS*ESMRPRTPGQRIKG
Trigger: GCCTTTTATTCTCTGACCTGGGGTTCTTGGCCTCATGGATTCCAAGGAATGGAAACTTGGGCCATGTGGACCACTGAGGTTCCTTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579349.1
3UTR-3UTR TCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAGTGGTCCTGATGGGTaGCCTGTACACTGGTTAGAG +
Preference number: 2 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVSGPDG*PVHWLE
Trigger: CTCTAACCAGTGTACAGGTCACCCATCAGGACCACT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTCACCCAACGCTAGTTaGCAAGGAGAACTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVSPNAS*QGELRE
Trigger: CTCCCTGAGTTCTCCTTGGCAACTAGCGTTGGGTGA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp TCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGCGTGGGGTCATTCTCCTaGGTCCAGTTATATCACATG +
Preference number: 2 (lower is better)
Translates to: SPGIGVRSCWFFCQWIVGVGSFS*VQLYHM
Trigger: CATGTGATATAACTGGACCCAGGAGAATGACCCCAC...GCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581559.1
3UTR CAA 90 bp TCTTCTTTTTCAGGGAGAAATGAGTTCTGGTGGCAGAGCGGCTGGTaGGCTGTCAGGTATCACCCAATGGGAATCAGAGAGAGTTATGAG +
Preference number: 2 (lower is better)
Translates to: SSFSGRNEFWWQSGW*AVRYHPMGIRESYE
Trigger: CTCATAACTCTCTCTGATTCCCATTGGGTGATACCTGACAGCCAACCAGCCGCTCTGCCACCAGAACTCATTTCTCCCTGAAAAAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGAACAGCCCTCTCTTTaGCATCAGATTTCCTTCCCG +
Preference number: 2 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCEQPSL*HQISFP
Trigger: CGGGAAGGAAATCTGATGTCAAAGAGAGGGCTGTTC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCCAGAAATGTACTGCTaGTGGCAGAATGCCACTAGT +
Preference number: 2 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEPEMYC*WQNATS
Trigger: ACTAGTGGCATTCTGCCAGCAGCAGTACATTTCTGG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTGCTCTCAGGGAGTCTaGCATTTCTACGGGATTAGA +
Preference number: 2 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKECSQGV*HFYGIR
Trigger: TCTAATCCCGTAGAAATGGCAGACTCCCTGAGAGCA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGGTCTGGTGGCCAATaGTTGCCAACACTGACCCTG +
Preference number: 2 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSGSGGQ*LPTLTL
Trigger: CAGGGTCAGTGTTGGCAAGCATTGGCCACCAGACCC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGAAATGTACTGCTGCTaGCAGAATGCCACTAGTTGC +
Preference number: 2 (lower is better)
Translates to: VCHFYGIRRQATLASAPYEMYCC*QNATSC
Trigger: GCAACTAGTGGCATTCTGCCAGCAGCAGTACATTTC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGCACCATATGACATGTaGAGCTGGCCATTTCACCCA +
Preference number: 2 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCAPYDM*SWPFHP
Trigger: TGGGTGAAATGGCCAGCTCCACATGTCATATGGTGC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGAAGACAGGCGACATTaGCCAGTGCACCATATGACA +
Preference number: 2 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVEDRRH*PVHHMT
Trigger: TGTCATATGGTGCACTGGCCAATGTCGCCTGTCTTC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGGGCCTAGAGAAGGTTaGGCTAGCCCAATGAATATT +
Preference number: 2 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEGPREG*ASPMNI
Trigger: AATATTCATTGGGCTAGCCCAACCTTCTCTAGGCCC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGGCCAGTGCACCATATaGCATGTGGAGCTGGCCATT +
Preference number: 2 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEGQCTI*HVELAI
Trigger: AATGGCCAGCTCCACATGTCATATGGTGCACTGGCC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTATAGTGAGCTTGCACTaGTTTGCCATGGCATGGTAC +
Preference number: 2 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCIVSLH*FAMAWY
Trigger: GTACCATGCCATGGCAAACCAGTGCAAGCTCACTAT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATCCTTTGGTGCTATaGCATGAGAGATTCCCATGG +
Preference number: 2 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKENPLVL*HERFPW
Trigger: CCATGGGAATCTCTCATGCCATAGCACCAAAGGATT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATCACCCAACGCTAGTTaGCAAGGAGAACTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQSPNAS*QGELRE
Trigger: CTCCCTGAGTTCTCCTTGGCAACTAGCGTTGGGTGA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CCACTGATTGTTTCCATAATCCAGTCATCAATTGGGATGTTCTTGTCCAAGGTAGGGCTGCTTCATACGTaGTGGCATGTGCAGTCATGC +
Preference number: 2 (lower is better)
Translates to: PLIVSIIQSSIGMFLSKVGLLHT*WHVQSC
Trigger: GCATGACTGCACATGCCACCACGTATGAAGCAGCCC...TACCTTGGACAAGAACATCCCAATTGATGACTGGATTATGGAAACAATCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAATCCTTTGGTGCTATaGCATGAGAGATTCCCATGG +
Preference number: 2 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVNPLVL*HERFPW
Trigger: CCATGGGAATCTCTCATGCCATAGCACCAAAGGATT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGCACCATATGACATGTaGAGCTGGCCATTTCACCCA +
Preference number: 2 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQAPYDM*SWPFHP
Trigger: TGGGTGAAATGGCCAGCTCCACATGTCATATGGTGC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp AGTAGCACTGTGTCTCCCATGAAGGCTGTGACAGATTCTGTCTGTGAAAGGAACCTCCCCAGCAATGATTaGGCTGTAGAAAAATGTCAG +
Preference number: 2 (lower is better)
Translates to: SSTVSPMKAVTDSVCERNLPSND*AVEKCQ
Trigger: CTGACATTTTTCTACAGCCCAATCATTGCTGGGGAG...GTTCCTTTCACAGACAGAATCTGTCACAGCCTTCATGGGAGACACAGTGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581559.1
3UTR-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATTAACTGAGTGGTCCTaGTGGGTGACCTGTACACTG +
Preference number: 2 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWELTEWS*WVTCTL
Trigger: CAGTGTACAGGTCACCCATCAGGACCACTCAGTTAA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAGGATCTTCCTTAACTaGGTGGTCCTGATGGGTGAC +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQRIFLN*VVLMGD
Trigger: GTCACCCATCAGGACCACTCAGTTAAGGAAGATCCT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAGGATCTTCCTTAACTaGGTGGTCCTGATGGGTGAC +
Preference number: 2 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIARIFLN*VVLMGD
Trigger: GTCACCCATCAGGACCACTCAGTTAAGGAAGATCCT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCTCATAATCATCATTTaGCAATTCCTGATGCCTGTG +
Preference number: 2 (lower is better)
Translates to: VCHFYGIRRQATLASAPYLIIII*QFLMPV
Trigger: CACAGGCATCAGGAATTGTCAAATGATGATTATGAG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATTTGGTGCTATGGCATaGGAGATTCCCATGGGTGCT +
Preference number: 2 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSFGAMA*EIPMGA
Trigger: AGCACCCATGGGAATCTCTCATGCCATAGCACCAAA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATTTGGTGCTATGGCATaGGAGATTCCCATGGGTGCT +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQFGAMA*EIPMGA
Trigger: AGCACCCATGGGAATCTCTCATGCCATAGCACCAAA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGCCTTAGTGAAGCTTTaGAATTGTATCACAGTGTGG +
Preference number: 2 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCALVKL*NCITVW
Trigger: CCACACTGTGATACAATTTCAAAGCTTCACTAAGGC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGAACAGCCCTCTCTTTaGCATCAGATTTCCTTCCCG +
Preference number: 2 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEEQPSL*HQISFP
Trigger: CGGGAAGGAAATCTGATGTCAAAGAGAGGGCTGTTC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTCTTGGACACAGGTGTaGTGTTTATGGGTAATTGGT +
Preference number: 2 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCSWTQV*CLWVIG
Trigger: ACCAATTACCCATAAACAGCACACCTGTGTCCAAGA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGAAGACAGGCGACATTaGCCAGTGCACCATATGACA +
Preference number: 2 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSEDRRH*PVHHMT
Trigger: TGTCATATGGTGCACTGGCCAATGTCGCCTGTCTTC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACAACCTATTCCAAACTaGGCACTCAGGATTACCCTC +
Preference number: 2 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSQPIPN*ALRITL
Trigger: GAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACCAGAAATGTACTGCTaGTGGCAGAATGCCACTAGT +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQPEMYC*WQNATS
Trigger: ACTAGTGGCATTCTGCCAGCAGCAGTACATTTCTGG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGTTTCCAGAAATGTACTaGTGCTGGCAGAATGCCACT +
Preference number: 2 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQFPEMY*CWQNAT
Trigger: AGTGGCATTCTGCCAGCAGCAGTACATTTCTGGAAA...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACTCGTGGGTGTCAAGTaGCTAAGGAGAATGTTCCAT +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQLVGVK*LRRMFH
Trigger: ATGGAACATTCTCCTTAGGCACTTGACACCCACGAG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGTGTATGGCTGCTTCTaGATCTCCAGAAAGTTGTGG +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQVYGCF*ISRKLW
Trigger: CCACAACTTTCTGGAGATGCAGAAGCAGCCATACAC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGAAATGTACTGCTGCTaGCAGAATGCCACTAGTTGC +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQEMYCC*QNATSC
Trigger: GCAACTAGTGGCATTCTGCCAGCAGCAGTACATTTC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGGGCCTAGAGAAGGTTaGGCTAGCCCAATGAATATT +
Preference number: 2 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEGPREG*ASPMNI
Trigger: AATATTCATTGGGCTAGCCCAACCTTCTCTAGGCCC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CAA 90 bp TCAGAATGTTGTCTGAAACATCACACTAGCACAGGATGGCTCTCCTaGTGTAGCTGGAACCAAAGCAGGAGATTGAACATACACCTAATT +
Preference number: 2 (lower is better)
Translates to: SECCLKHHTSTGWLS*CSWNQSRRLNIHLI
Trigger: AATTAGGTGTATGTTCAATCTCCTGCTTTGGTTCCAGCTACACAAGGAGAGCCATCCTGTGCTAGTGTGATGTTTCAGACAACATTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp TCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATGGTCCTCAAGGAACACAAAATaGCAGATTGAGCCACCATAC +
Preference number: 2 (lower is better)
Translates to: SLTRLIVTPVSASSGVWSSRNTK*QIEPPY
Trigger: GTATGGTGGCTCAATCTGTCATTTTGTGTTCCTTGA...GGACCATACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTACTTGCCAAAATAGGTaGATTTTTAGCCACTCACTA +
Preference number: 2 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCTCQNR*IFSHSL
Trigger: TAGTGAGTGGCTAAAAATTCACCTATTTTGGCAAGT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAAAAGCCACCCAAATTaGAAACTGTCCTATTACAAG +
Preference number: 2 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVKSHPN*KLSYYK
Trigger: CTTGTAATAGGACAGTTTTCAATTTGGGTGGCTTTT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGCCTTAGTGAAGCTTTaGAATTGTATCACAGTGTGG +
Preference number: 2 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQALVKL*NCITVW
Trigger: CCACACTGTGATACAATTTCAAAGCTTCACTAAGGC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACATCCAATCCTTTGGTaGTATGGCATGAGAGATTCC +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQHPILW*YGMRDS
Trigger: GGAATCTCTCATGCCATAGCACCAAAGGATTGGATG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCACAGTTTAAGATGCTaGTTTGAAAAGTATCTGCTG +
Preference number: 2 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVHSLRC*FEKYLL
Trigger: CAGCAGATACTTTTCAAAGCAGCATCTTAAACTGTG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGTCCACAGTTTAAGATaGTGCTTTGAAAAGTATCTG +
Preference number: 2 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCVHSLR*CFEKYL
Trigger: CAGATACTTTTCAAAGCAGCATCTTAAACTGTGGAC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCAGGTGTGCTGTTTATaGGTAATTGGTATGCTGCAA +
Preference number: 2 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQQVCCL*VIGMLQ
Trigger: TTGCAGCATACCAATTACCCATAAACAGCACACCTG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAATTGTATCACAGTGTaGTATGGCACAAAAGCCACC +
Preference number: 2 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQNCITV*YGTKAT
Trigger: GGTGGCTTTTGTGCCATACCACACTGTGATACAATT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAACCCTGTAGGCAGAGTTaGCATTCTTTAAGAGAAGGT +
Preference number: 2 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEPCRQS*HSLREG
Trigger: ACCTTCTCTTAAAGAATGCCAACTCTGCCTACAGGG...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGAACAAATTCGCAAATaGACCGGACTTTCTAATGAA +
Preference number: 2 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCEQIRK*TGLSNE
Trigger: TTCATTAGAAAGTCCGGTCCATTTGCGAATTTGTTC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp AGAACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTACACAAAATGACAGATTaGGCCACCATACCTTGGTCA +
Preference number: 2 (lower is better)
Translates to: RTSLTRLIVTPVSASSGVHKMTD*ATIPWS
Trigger: TGACCAAGGTATGGTGGCTCAATCTGTCATTTTGTG...TACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAATGCTTATTCCTTCTaGACTGCTTCAGGATCTTCC +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQNAYSF*TASGSS
Trigger: GGAAGATCCTGAAGCAGTTCAGAAGGAATAAGCATT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAATGCTTATTCCTTCTaGACTGCTTCAGGATCTTCC +
Preference number: 2 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWENAYSF*TASGSS
Trigger: GGAAGATCCTGAAGCAGTTCAGAAGGAATAAGCATT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCATCTTGGACACAGGTGTaGTGTTTATGGGTAATTGGT +
Preference number: 2 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIASWTQV*CLWVIG
Trigger: ACCAATTACCCATAAACAGCACACCTGTGTCCAAGA...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTATCCTATCCCTTCCATaGTCTTTTAAAATTATGACC +
Preference number: 2 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCILSLP*SFKIMT
Trigger: GGTCATAATTTTAAAAGAGCATGGAAGGGATAGGAT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp TCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGAAAATCCAGTCATCAATTaGGATGTTCTTGTCCAAGGT +
Preference number: 2 (lower is better)
Translates to: SQENLHLPYQSRSLSQAENPVIN*DVLVQG
Trigger: ACCTTGGACAAGAACATCCCAATTGATGACTGGATT...TTCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACTGTTTATGGGTAATTaGTATGCTGCAAAGTTCCCG +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQLFMGN*YAAKFP
Trigger: CGGGAACTTTGCAGCATACCAATTACCCATAAACAG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACAGGTGTGCTGTTTATaGGTAATTGGTATGCTGCAA +
Preference number: 2 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAQVCCL*VIGMLQ
Trigger: TTGCAGCATACCAATTACCCATAAACAGCACACCTG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATATCACAGTGTGGTATaGCACAAAAGCCACCCAAAT +
Preference number: 2 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEYHSVV*HKSHPN
Trigger: ATTTGGGTGGCTTTTGTGCCATACCACACTGTGATA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAAACTAGCTCCCTTTTaGCGATTCAGCTGCATAAAC +
Preference number: 2 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSKLAPF*RFSCIN
Trigger: GTTTATGCAGCTGAATCGCCAAAAGGGAGCTAGTTT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAATGAGCACTCTTGTTaGAGGAACAAATTCGCAAAT +
Preference number: 2 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQNEHSC*RNKFAN
Trigger: ATTTGCGAATTTGTTCCTTCAACAAGAGTGCTCATT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACTTCATTCTATAGATTaGAGGTGTGACTCAATCCCT +
Preference number: 2 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSLHSID*RCDSIP
Trigger: AGGGATTGAGTCACACCTTCAATCTATAGAATGAAG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATCAAAGAGGCAAGTATaGCTGGTTTCTTATTGGCTA +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQSKRQV*LVSYWL
Trigger: TAGCCAATAAGAAACCAGTCATACTTGCCTCTTTGA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGTCCACAGTTTAAGATaGTGCTTTGAAAAGTATCTG +
Preference number: 2 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQVHSLR*CFEKYL
Trigger: CAGATACTTTTCAAAGCAGCATCTTAAACTGTGGAC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGCAGAGTTTTGCTCTTaGTCTTCTACCAACAACAAT +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQAEFCS*SSTNNN
Trigger: ATTGTTGTTGGTAGAAGAGCAAGAGCAAAACTCTGC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACATGAGAGATTCCCATaGGTGCTTTGTATGTTTAAG +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQHERFP*VLCMFK
Trigger: CTTAAACATACAAAGCACCCATGGGAATCTCTCATG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAATCTCCAGAAAGTTGTaGGCTCTGTATAGTATATGG +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQISRKL*ALYSIW
Trigger: CCATATACTATACAGAGCCCACAACTTTCTGGAGAT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAAAAGCCACCCAAATTaGAAACTGTCCTATTACAAG +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQKSHPN*KLSYYK
Trigger: CTTGTAATAGGACAGTTTTCAATTTGGGTGGCTTTT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATCAATCCCTAAAATCTaGGATTTGCAACCTATTCCA +
Preference number: 2 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSSIPKI*DLQPIP
Trigger: TGGAATAGGTTGCAAATCTCAGATTTTAGGGATTGA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATCAATCCCTAAAATCTaGGATTTGCAACCTATTCCA +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQSIPKI*DLQPIP
Trigger: TGGAATAGGTTGCAAATCTCAGATTTTAGGGATTGA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAACGAAGAGTCCAGATaGGTAGTAATATTCATTTGC +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQNEESR*VVIFIC
Trigger: GCAAATGAATATTACTACTCATCTGGACTCTTCGTT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGCTTTGAAAAGTATCTaGTGGATTTACATGTCGGAA +
Preference number: 2 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSALKSI*WIYMSE
Trigger: TTCCGACATGTAAATCCAGCAGATACTTTTCAAAGC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAACACAGTTTAAGATGCTaGTTTGAAAAGTATCTGCTG +
Preference number: 2 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEHSLRC*FEKYLL
Trigger: CAGCAGATACTTTTCAAAGCAGCATCTTAAACTGTG...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGATCCTATCCCTTCCATaGTCTTTTAAAATTATGACC +
Preference number: 2 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQILSLP*SFKIMT
Trigger: GGTCATAATTTTAAAAGAGCATGGAAGGGATAGGAT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAAAGTAACCCTGCTCTaGATCTATTTTAAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQKVTLL*IYFKVQ
Trigger: CTGAACTTTAAAATAGATGCAGAGCAGGGTTACTTT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CAA 90 bp CACTTGCATTTTGTAAGACTAGACCTACACATTAAACAACAGGCCTaGACAAAGGAAAACATAGGTATTAGTTATGACAGTGTGGTCACT +
Preference number: 2 (lower is better)
Translates to: HLHFVRLDLHIKQQA*TKENIGISYDSVVT
Trigger: AGTGACCACACTGTCATAACTAATACCTATGTTTTCCTTTGTCAAGGCCTGTTGTTTAATGTGTAGGTCTAGTCTTACAAAATGCAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CAA 90 bp TCCTATTACAAGCTTAAGCATATAATTACCATGTGTCTGAGAAGATaGCATATTATATCCTCTTTCCAGAAATGTACTGCTGCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SYYKLKHIITMCLRR*HIISSFQKCTAAGR
Trigger: TCTGCCAGCAGCAGTACATTTCTGGAAAGAGGATATAATATGCAATCTTCTCAGACACATGGTAATTATATGCTTAAGCTTGTAATAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR GCA 72 bp TCCAATGTCCCCCGGTTGGAGTCGGCTGATCTGCAATaGTCCAGAGGGCAAGACCACCACTCGGGAGTCACC +
Preference number: 3 (lower is better)
Translates to: SNVPRLESADLQ*SRGQDHHSGVT
Trigger: GGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGGGGGACATTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CCA 72 bp CCTTGGGAGCAGAGGTGGGGGCTGCTTCATACGTGGTaGCATGTGCAGTCATGCTCCAAGTACTGGACCTTC +
Preference number: 3 (lower is better)
Translates to: PWEQRWGLLHTW*HVQSCSKYWTF
Trigger: GAAGGTCCAGTACTTGGAGCATGACTGCACATGCCACCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR-3UTR CAA 90 bp GCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTCAGAGAATAAAAGGCTaGCTGCCATCTTGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: APEGKTTTRESPGIGVRSQRIKG*LPSWEW
Trigger: CCACTCCCAAGATGGCAGCAAGCCTTTTATTCTCTG...AGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579349.1
3UTR-3UTR CAA 90 bp CTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTTCTTCTGCCAGTGGATaGTTGGCATGGGCTCCCCAA +
Preference number: 3 (lower is better)
Translates to: LICNAPEGKTTTRESPGISSASG*LAWAPQ
Trigger: TTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGA...AATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CCA 72 bp TGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTaGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCA +
Preference number: 3 (lower is better)
Translates to: CSRGQDHHSGVT*DWSQVLLVLLP
Trigger: TGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR-3UTR CAA 90 bp CAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGCCAATGACTTCACACTaGAGTAGCACTGTGTCTCCC +
Preference number: 3 (lower is better)
Translates to: QCSRGQDHHSGVTWDWSQPMTSH*SSTVSP
Trigger: GGGAGACACAGTGCTACTCAAGTGTGAAGTCATTGG...CTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR TCA 72 bp ATCGGTAAATTCCAATGTCCCCCGGTTGGAGTCGGCTaGTCTGCAATGCTCCAGAGGGCAAGACCACCACTC +
Preference number: 3 (lower is better)
Translates to: IGKFQCPPVGVG*SAMLQRARPPL
Trigger: GAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGGGGGACATTGGAATTTACCGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579349.1
3UTR CCA 72 bp ACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTaGTTCTTCTGCCAGTGGATTGTTGGCATGGGCTCC +
Preference number: 3 (lower is better)
Translates to: TRESPGIGVRSC*FFCQWIVGMGS
Trigger: GGAGCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CCA 72 bp AGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTaGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGAT +
Preference number: 3 (lower is better)
Translates to: RGQDHHSGVTWD*SQVLLVLLPVD
Trigger: ATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR-3UTR CAA 90 bp GAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGCCAAGTTTCCATTCCTaGGAATCCATGAGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: EGKTTTRESPGIGVRSCWPSFHS*ESMRPR
Trigger: TCTTGGCCTCATGGATTCCAAGGAATGGAAACTTGG...CCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579349.1
3UTR GCA 72 bp GTGAGTTTGGGGCCTGGGGACAGCTGCATCGGCTGTTaGAACTCTCTAGCGAGTGTCATCCATCCATATACT +
Preference number: 3 (lower is better)
Translates to: VSLGPGDSCIGC*NSLASVIHPYT
Trigger: AGTATATGGATGGATGACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCCAGGCCCCAAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582875.1
3UTR CCA 72 bp AGACAGGCGACATTGGCCAGTGCACCATATGACATGTaGAGCTGGCCATTTCACCCAACGCTAGTTGCCAAG +
Preference number: 3 (lower is better)
Translates to: RQATLASAPYDM*SWPFHPTLVAK
Trigger: CTTGGCAACTAGCGTTGGGTGAAATGGCCAGCTCCACATGTCATATGGTGCACTGGCCAATGTCGCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 72 bp AAGTATCTGCTGGATTTACATGTCGGAAGTGTCAGGTaGCACCTGCCCCTCTGCTTCCCCCTGACTCTGACA +
Preference number: 3 (lower is better)
Translates to: KYLLDLHVGSVR*HLPLCFPLTLT
Trigger: TGTCAGAGTCAGGGGGAAGCAGAGGGGCAGGTGCCACCTGACACTTCCGACATGTAAATCCAGCAGATACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp CACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCACCAATGACTTCACACTaGAGTAGCACTGTGTCTCCC +
Preference number: 3 (lower is better)
Translates to: HHSGVTWDWSQVLLVLLPPMTSH*SSTVSP
Trigger: GGGAGACACAGTGCTACTCAAGTGTGAAGTCATTGG...TGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR GCA 72 bp AGCAGAGGTGGGGGCTGCTTCATACGTGGTGGCATGTaGAGTCATGCTCCAAGTACTGGACCTTCTGTTTTT +
Preference number: 3 (lower is better)
Translates to: SRGGGCFIRGGM*SHAPSTGPSVF
Trigger: AAAAACAGAAGGTCCAGTACTTGGAGCATGACTGCACATGCCACCACGTATGAAGCAGCCCCCACCTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR GCA 72 bp TCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTaGCAGTGGATTGTTGGCATGGGCTCCCCAATGACT +
Preference number: 3 (lower is better)
Translates to: SPGIGVRSCWFF*QWIVGMGSPMT
Trigger: AGTCATTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CCA 72 bp GGCAGAGCGGCTGGTTGGCTGTCAGGTATCACCCAATaGGAATCAGAGAGAGTTATGAGCATAAAGAGTCCT +
Preference number: 3 (lower is better)
Translates to: GRAAGWLSGITQ*ESERVMSIKSP
Trigger: AGGACTCTTTATGCTCATAACTCTCTCTGATTCCCATTGGGTGATACCTGACAGCCAACCAGCCGCTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATGGCAGAGCGGCTGGTaGGCTGTCAGGTATCACCCA +
Preference number: 3 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQWQSGW*AVRYHP
Trigger: TGGGTGATACCTGACAGCCAACCAGCCGCTCTGCCA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCACTGGTTAGAGTTCTaGGACACAGGTGTGCTGTTT +
Preference number: 3 (lower is better)
Translates to: VCHFYGIRRQATLASAPYHWLEF*DTGVLF
Trigger: AAACAGCACACCTGTGTCCAAGAACTCTAACCAGTG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 72 bp AAGTCCTTCAGAGAGTGCAACTGGAAGTCTGCCACGTaGACGTTATGCAATAGTGGCAACGAAGAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: KSFRECNWKSAT*TLCNSGNEESR
Trigger: TCTGGACTCTTCGTTGCCACTATTGCATAACGTTCACGTGGCAGACTTCCAGTTGCACTCTCTGAAGGACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCACTGGTTAGAGTTCTaGGACACAGGTGTGCTGTTT +
Preference number: 3 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVHWLEF*DTGVLF
Trigger: AAACAGCACACCTGTGTCCAAGAACTCTAACCAGTG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATAACAAAATAGTGAGCTaGCACTGGTTTGCCATGGCA +
Preference number: 3 (lower is better)
Translates to: VCHFYGIRRQATLASAPYNKIVS*HWFAMA
Trigger: TGCCATGGCAAACCAGTGCAAGCTCACTATTTTGTT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGGCCTTAGTGAAGCTTaGAAATTGTATCACAGTGTG +
Preference number: 3 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEGLSEA*KLYHSV
Trigger: CACACTGTGATACAATTTCAAAGCTTCACTAAGGCC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAAAACATCCAATCCTTaGGTGCTATGGCATGAGAGA +
Preference number: 3 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVKTSNP*VLWHER
Trigger: TCTCTCATGCCATAGCACCAAAGGATTGGATGTTTT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGGCCTTAGTGAAGCTTaGAAATTGTATCACAGTGTG +
Preference number: 3 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVGLSEA*KLYHSV
Trigger: CACACTGTGATACAATTTCAAAGCTTCACTAAGGCC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 72 bp TCAGCAATGGACAATTCATTTCCAAAGTGGTCCCTCTaGGGTATGGAACACTGCAGCTTTAACAGCCGTATC +
Preference number: 3 (lower is better)
Translates to: SAMDNSFPKWSL*GMEHCSFNSRI
Trigger: GATACGGCTGTTAAAGCTGCAGTGTTCCATACCTCAGAGGGACCACTTTGGAAATGAATTGTCCATTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 72 bp CATCACACTAGCACAGGATGGCTCTCCTTGTGTAGCTaGAACCAAAGCAGGAGATTGAACATACACCTAATT +
Preference number: 3 (lower is better)
Translates to: HHTSTGWLSLCS*NQSRRLNIHLI
Trigger: AATTAGGTGTATGTTCAATCTCCTGCTTTGGTTCCAGCTACACAAGGAGAGCCATCCTGTGCTAGTGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 72 bp TGGACAATTCATTTCCAAAGTGGTCCCTCTGAGGTATaGAACACTGCAGCTTTAACAGCCGTATCTAGATCC +
Preference number: 3 (lower is better)
Translates to: WTIHFQSGPSEV*NTAALTAVSRS
Trigger: GGATCTAGATACGGCTGTTAAAGCTGCAGTGTTCCATACCTCAGAGGGACCACTTTGGAAATGAATTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAGTGAAGCTTTGAAATaGTATCACAGTGTGGTATGG +
Preference number: 3 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVSEALK*YHSVVW
Trigger: CCATACCACACTGTGATACAATTTCAAAGCTTCACT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTTTCTAATGAACCATTaGAACAGCCCTCTCTTTGAC +
Preference number: 3 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCFLMNH*NSPLFD
Trigger: GTCAAAGAGAGGGCTGTTCAAATGGTTCATTAGAAA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 72 bp GCCAAACTCCTAAGGAAGATGGCCTTAGTGAAGCTTTaGAATTGTATCACAGTGTGGTATGGCACAAAAGCC +
Preference number: 3 (lower is better)
Translates to: AKLLRKMALVKL*NCITVWYGTKA
Trigger: GGCTTTTGTGCCATACCACACTGTGATACAATTTCAAAGCTTCACTAAGGCCATCTTCCTTAGGAGTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 72 bp AGAGAGAGTTATGAGCATAAAGAGTCCTGGATACCATaGACTAGACTCAGTAGGAGGAAGTCAGAGGCTAGT +
Preference number: 3 (lower is better)
Translates to: RESYEHKESWIP*TRLSRRKSEAS
Trigger: ACTAGCCTCTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCATAACTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 72 bp GAGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTaGTATGCTGCAAAGTTCCCGGAAAATTCACCTCAT +
Preference number: 3 (lower is better)
Translates to: EFLDTGVLFMGN*YAAKFPENSPH
Trigger: ATGAGGTGAATTTTCCGGGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 72 bp TCTGAAAATACATGTTCAGCACACAGTGAGATCCCTTaGCCCATGCCCCTGTGTTTATTAAATCTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: SENTCSAHSEIP*PMPLCLLNLAE
Trigger: CTCTGCAAGATTTAATAAACACAGGGGCATGGGCCAAGGGATCTCACTGTGTGCTGAACATGTATTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAACAAAATAGTGAGCTaGCACTGGTTTGCCATGGCA +
Preference number: 3 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQNKIVS*HWFAMA
Trigger: TGCCATGGCAAACCAGTGCAAGCTCACTATTTTGTT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAAAACATCCAATCCTTaGGTGCTATGGCATGAGAGA +
Preference number: 3 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQKTSNP*VLWHER
Trigger: TCTCTCATGCCATAGCACCAAAGGATTGGATGTTTT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGTTCACAGGTTTCTTCTaGTCAAGAGATCAGGAGACT +
Preference number: 3 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQFTGFF*SRDQET
Trigger: AGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAA...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 72 bp ACGCCAGTGTCTGCTTCATCAGGTGTATGGTCCAGGTaGAAAGAGGAATATAAAGTAATGACTGACATGTCT +
Preference number: 3 (lower is better)
Translates to: TPVSASSGVWSR*KEEYKVMTDMS
Trigger: AGACATGTCAGTCATTACTTTATATTCCTCTTTTCACCTGGACCATACACCTGATGAAGCAGACACTGGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR GCA 72 bp AACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTaGTTCATCAGGTGTATGGTCCAGGTGAAAAGAGGA +
Preference number: 3 (lower is better)
Translates to: NFINKINRHASV*FIRCMVQVKRG
Trigger: TCCTCTTTTCACCTGGACCATACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR GCA 72 bp CCAGAAATGTACTGCTGCTGGCAGAATGCCACTAGTTaGAGATTTTTATATTCCTGGACTCCAGACATACAT +
Preference number: 3 (lower is better)
Translates to: PEMYCCWQNATS*RFLYSWTPDIH
Trigger: ATGTATGTCTGGAGTCCAGGAATATAAAAATCTGCAACTAGTGGCATTCTGCCAGCAGCAGTACATTTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR GCA 72 bp GAACTAGACTCAGTAGGAGGAAGTCAGAGGCTAGTTTaGAGTATTCACAGGTTTCTTCTTGTCAAGAGATCA +
Preference number: 3 (lower is better)
Translates to: ELDSVGGSQRLV*SIHRFLLVKRS
Trigger: TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCCTCCTACTGAGTCTAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 72 bp TGTGCTGTAAGGAAAACATCCAATCCTTTGGTGCTATaGCATGAGAGATTCCCATGGGTGCTTTGTATGTTT +
Preference number: 3 (lower is better)
Translates to: CAVRKTSNPLVL*HERFPWVLCMF
Trigger: AAACATACAAAGCACCCATGGGAATCTCTCATGCCATAGCACCAAAGGATTGGATGTTTTCCTTACAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATACAAAAACAGAGACTaGAGTGTATGGCTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQYKNRD*SVWLLL
Trigger: CAGAAGCAGCCATACACTCAAGTCTCTGTTTTTGTA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 72 bp GAAGAGGATAGGATCAGAGAGTGGCCCCACTCCTTTTaGATTTCGTGCTTGAATTCGAAAGTAATACATAGT +
Preference number: 3 (lower is better)
Translates to: EEDRIREWPHSF*ISCLNSKVIHS
Trigger: ACTATGTATTACTTTCGAATTCAAGCACGAAATTCAAAAGGAGTGGGGCCACTCTCTGATCCTATCCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR GCA 72 bp ATTGAAGGTGTGACTCAATCCCTAAAATCTGAGATTTaGAACCTATTCCAAACTGAGCACTCAGGATTACCC +
Preference number: 3 (lower is better)
Translates to: IEGVTQSLKSEI*NLFQTEHSGLP
Trigger: GGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAGATTTTAGGGATTGAGTCACACCTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 72 bp TTGAATGTGATTTACAAAAACAGAGACTTGAGTGTATaGCTGCTTCTGCATCTCCAGAAAGTTGTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: LNVIYKNRDLSV*LLLHLQKVVGS
Trigger: AGAGCCCACAACTTTCTGGAGATGCAGAAGCAGCCATACACTCAAGTCTCTGTTTTTGTAAATCACATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAGTGAAGCTTTGAAATaGTATCACAGTGTGGTATGG +
Preference number: 3 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWESEALK*YHSVVW
Trigger: CCATACCACACTGTGATACAATTTCAAAGCTTCACT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATTTCTAATGAACCATTaGAACAGCCCTCTCTTTGAC +
Preference number: 3 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSFLMNH*NSPLFD
Trigger: GTCAAAGAGAGGGCTGTTCAAATGGTTCATTAGAAA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAATTAAACAACAGGCCTaGACAAAGGAAAACATAGGT +
Preference number: 3 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSIKQQA*TKENIG
Trigger: ACCTATGTTTTCCTTTGTCAAGGCCTGTTGTTTAAT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAACATATATGAATCATTaGAGGGTAAAGGGAACAGAG +
Preference number: 3 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWETYMNH*RVKGTE
Trigger: CTCTGTTCCCTTTACCCTCAAATGATTCATATATGT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAACATATATGAATCATTaGAGGGTAAAGGGAACAGAG +
Preference number: 3 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSTYMNH*RVKGTE
Trigger: CTCTGTTCCCTTTACCCTCAAATGATTCATATATGT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAAGTTACCTGAAAACTaGGGCAGGCAATTATATACA +
Preference number: 3 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEKLPEN*GRQLYT
Trigger: TGTATATAATTGCCTGCCCAAGTTTTCAGGTAACTT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 72 bp AGCACACTAACAATCTGTTTGAGTTGCAAAGCCCTTTaGATGAGTAGCACTGATCTGCAAAATGCTTTCAGA +
Preference number: 3 (lower is better)
Translates to: STLTICLSCKAL*MSSTDLQNAFR
Trigger: TCTGAAAGCATTTTGCAGATCAGTGCTACTCATTCAAAGGGCTTTGCAACTCAAACAGATTGTTAGTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CCA 72 bp TGGCAGAATGCCACTAGTTGCAGATTTTTATATTCCTaGACTCCAGACATACATATTAACCAAGGGTGGATT +
Preference number: 3 (lower is better)
Translates to: WQNATSCRFLYS*TPDIHINQGWI
Trigger: AATCCACCCTTGGTTAATATGTATGTCTGGAGTCCAGGAATATAAAAATCTGCAACTAGTGGCATTCTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 72 bp CTCACTAATATCCACCACTTGTGCAAGATGAATGACTaGGTTACAAACATAAGCATTCTCTGCCTTTTGTTT +
Preference number: 3 (lower is better)
Translates to: LTNIHHLCKMND*VTNISILCLLF
Trigger: AAACAAAAGGCAGAGAATGCTTATGTTTGTAACTCAGTCATTCATCTTGCACAAGTGGTGGATATTAGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR GCA 72 bp AAGATTGCATATTATATCCTCTTTCCAGAAATGTACTaGTGCTGGCAGAATGCCACTAGTTGCAGATTTTTA +
Preference number: 3 (lower is better)
Translates to: KIAYYILFPEMY*CWQNATSCRFL
Trigger: TAAAAATCTGCAACTAGTGGCATTCTGCCAGCAGCAGTACATTTCTGGAAAGAGGATATAATATGCAATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR TCA 72 bp TATCACAGTGTGGTATGGCACAAAAGCCACCCAAATTaGAAACTGTCCTATTACAAGCTTAAGCATATAATT +
Preference number: 3 (lower is better)
Translates to: YHSVVWHKSHPN*KLSYYKLKHII
Trigger: AATTATATGCTTAAGCTTGTAATAGGACAGTTTTCAATTTGGGTGGCTTTTGTGCCATACCACACTGTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR GCA 72 bp ATTGCATATTATATCCTCTTTCCAGAAATGTACTGCTaGTGGCAGAATGCCACTAGTTGCAGATTTTTATAT +
Preference number: 3 (lower is better)
Translates to: IAYYILFPEMYC*WQNATSCRFLY
Trigger: ATATAAAAATCTGCAACTAGTGGCATTCTGCCAGCAGCAGTACATTTCTGGAAAGAGGATATAATATGCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GAGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCGGCTTGCTGCCATCTTaGGAGTGGCCTGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: ESADLQCSRGQDHHSGVTGLLPS*EWPAAI
Trigger: GATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCC...GGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR TCA 90 bp GGGAGGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACCAGGTGGGCGCCAGCTaGGACGGACAAATCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRLPTHNDGTRLPFPSNDQVGAS*DGQIGW
Trigger: CCAGCCGATTTGTCCGTCTCAGCTGGCGCCCACCTG...GTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp GGGAGGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACCCGGTTGGAGTCGGCTaGTCTGCAATGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRLPTHNDGTRLPFPSNDPVGVG*SAMLQR
Trigger: CCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGG...GTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp AATGACTGTCAAGTCCTTGGGAGCAGAGGTGGGGGCTGCTTCATACGTGGTGGCGTTCCCTTTCGCTTCTaGAGGTGGGCGCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: NDCQVLGSRGGGCFIRGGVPFRF*RWAPAE
Trigger: CTCAGCTGGCGCCCACCTGCAGAAGCGAAAGGGAAC...GCCACCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGGACTTGACAGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp ATGTCCCCCGGTTGGAGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCCCAATGTCCCCCGGTTaGAGTCGGCTGATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: MSPGWSRLICNAPEGKTTPMSPG*SRLICN
Trigger: ATTGCAGATCAGCCGACTCCAACCGGGGGACATTGG...GGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGGGGGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR GCA 90 bp TTGGAGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCTCGGCTGATCTGCAATaGTCCAGAGGGCAAGACCAC +
Preference number: 4 (lower is better)
Translates to: LESADLQCSRGQDHHSGVSADLQ*SRGQDH
Trigger: GTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGA...GACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR GCA 90 bp AGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGATCTTGGGAGTGGCCTaGCGCCATCTTGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGQDHHSGVTWDWSQVLLILGVA*RHLGSS
Trigger: AGAGCTCCCAAGATGGCGGCAGGCCACTCCCAAGAT...CAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR CCA 90 bp GCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGGTTCTTCTGCCAGTaGATTGTTGGCATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: APEGKTTTRESPGIGVRSWFFCQ*IVGMGS
Trigger: GGAGCCCATGCCAACAATCCACTGGCAGAAGAACCA...AGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp AGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTCACTCGGGAGTCACCTaGGATTGGAGTCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SRLICNAPEGKTTTRESPHSGVT*DWSQVL
Trigger: CAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTG...AGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp GCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCACCAATGTCCCCCGGTTaGAGTCGGCTGATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: AMLQRARPPLGSHLGLESPMSPG*SRLICN
Trigger: ATTGCAGATCAGCCGACTCCAACCGGGGGACATTGG...TGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTCCAGGGAGACGTTCTaGGGCGGGGCACTTGGCACG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSRETF*GGALGT
Trigger: CGTGCCAAGTGCCCCGCCTCAGAACGTCTCCCTGGA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGAGGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGCTGCCAACTCACAATaGCGGCACGAGGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GGCQLTMTARGFPSLVMTAANSQ*RHEASL
Trigger: AAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGC...AGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp AGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCACTTTCGCTTCTGCAGGTaGGCGCCAGCTGAGACGGAC +
Preference number: 4 (lower is better)
Translates to: RVFHFQSPEEDRIREWPHFRFCR*APAETD
Trigger: GTCCGTCTCAGCTGGCGCCCACCTGCAGAAGCGAAA...GTGGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
3UTR CAA 72 bp CAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATaGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: QRARPPLGSHLG*ESGLVGSSASG
Trigger: TCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR TCA 90 bp GGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTCCGGTTGGAGTCGGCTaGTCTGCAATGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GVTWDWSQVLLVLLPVDCPVGVG*SAMLQR
Trigger: CCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGG...ACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAGGTGGGCGCCAGCTaGGACGGACAAATCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCQVGAS*DGQIGW
Trigger: CCAGCCGATTTGTCCGTCTCAGCTGGCGCCCACCTG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCGCTGTGTGGCCACCTTaGTGGGTTGAGAACTCTCTC +
Preference number: 4 (lower is better)
Translates to: GCQLTMTARGFPSLVMTVAVWPP*WVENSL
Trigger: GAGAGAGTTCTCAACCCATCAAGGTGGCCACACAGC...GACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp CCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTTCGGCTGATCTGCAATaGTCCAGAGGGCAAGACCAC +
Preference number: 4 (lower is better)
Translates to: PLGSHLGLESGLVGSSASSADLQ*SRGQDH
Trigger: GTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGA...ACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp ATGTCCCCCGGTTGGAGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCGTAAAGTCCCTCATCTaGCTTGTGGTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: MSPGWSRLICNAPEGKTTVKSLI*LVVSGM
Trigger: CATTCCAGACACCACAAGCCAGATGAGGGACTTTAC...GGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGGGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp GGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCCTGCCAGTGGATTGTTaGCATGGGCTCCCCAATGAC +
Preference number: 4 (lower is better)
Translates to: GCQLTMTARGFPSLVMTVLPVDC*HGLPND
Trigger: GTCATTGGGGAGCCCATGCCAACAATCCACTGGCAG...GACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp GACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCTGCCAGTGGATTGTTaGCATGGGCTCCCCAATGAC +
Preference number: 4 (lower is better)
Translates to: DHHSGVTWDWSQVLLVLLLPVDC*HGLPND
Trigger: GTCATTGGGGAGCCCATGCCAACAATCCACTGGCAG...CAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp AATGACTGTCAAGTCCTTGGGAGCAGAGGTGGGGGCTGCTTCATACGTGGTGGCTCGCACCACGATGTTTaGGTTCAAGGGAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: NDCQVLGSRGGGCFIRGGSHHDV*VQGRSP
Trigger: TGGACTCCTCCCTTGAACCCAAACATCGTGGTGCGA...GCCACCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGGACTTGACAGTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp GAGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCGTGGGGTCATTCTCCTaGGTCCAGTTATATCACATG +
Preference number: 4 (lower is better)
Translates to: ESADLQCSRGQDHHSGVTVGSFS*VQLYHM
Trigger: CATGTGATATAACTGGACCCAGGAGAATGACCCCAC...GGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581559.1
3UTR CAA 72 bp CACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTaGGTTCTTCTGCCAGTGGATTGTTGGCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: HSGVTWDWSQVL*VLLPVDCWHGL
Trigger: GAGCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
3UTR CAA 72 bp CACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTaGTTGGTTCTTCTGCCAGTGGATTGTTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: HHSGVTWDWSQV*LVLLPVDCWHG
Trigger: CCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR TCA 90 bp GCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAATTCCCAAGGCCAGATaGATGCCATCTTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AMLQRARPPLGSHLGLESIPKAR*MPSFFH
Trigger: GTGGAAGAAAGATGGCATTCATCTGGCCTTGGGAAT...TGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCCGGTTGGAGTCGGCTaGTCTGCAATGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEPVGVG*SAMLQR
Trigger: CCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTGGCTGGATTTCGAGCTaGGCATCGGTAAATTCCAAT +
Preference number: 4 (lower is better)
Translates to: MLQRARPPLGSHLGLESGGWISS*ASVNSN
Trigger: ATTGGAATTTACCGATGCTCAGCTCGAAATCCAGCC...ACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR TCA 90 bp TTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCTCCAGGGAGACGTTCTaGGGCGGGGCACTTGGCACG +
Preference number: 4 (lower is better)
Translates to: FLSRKFTSSLSEPQPQPSSRETF*GGALGT
Trigger: CGTGCCAAGTGCCCCGCCTCAGAACGTCTCCCTGGA...GCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp AGAGGTGGGGGCTGCTTCATACGTGGTGGCATGTGCAGTCATGCTCCAAGTACTTTTCCATCTCACCCCTaGGGGTCGTCTTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RGGGCFIRGGMCSHAPSTFPSHP*GSSFCV
Trigger: GACACAGAAAGACGACCCGCAGGGGTGAGATGGAAA...AGTACTTGGAGCATGACTGCACATGCCACCACGTATGAAGCAGCCCCCACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp CACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGGCTTCCAAGGGAGGCTaGCAACTCACAATGACGGCA +
Preference number: 4 (lower is better)
Translates to: HNDGTRLPFPSNDCQVLGASKGG*QLTMTA
Trigger: TGCCGTCATTGTGAGTTGGCAGCCTCCCTTGGAAGC...CCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGGCTGCCCTTCCTTTTaGCAGCACTGTGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCGCPSF*QHCGWP
Trigger: GGGCCACCCACAGTGCTGGCAAAAGGAAGGGCAGCC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGGGAGAGTCCCTTCCTaGAGGGTCAGTGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYGRVPS*RVSARW
Trigger: CCATCTGGCACTGACCCTGCAGGAAGGGACTCTCCC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGGGAGAGTCCCTTCCTaGAGGGTCAGTGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEGRVPS*RVSARW
Trigger: CCATCTGGCACTGACCCTGCAGGAAGGGACTCTCCC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGCATGGGCTCCCCTGCCAGTGGATTGTTaGCATGGGCTCCCCAATGAC +
Preference number: 4 (lower is better)
Translates to: LESGLVGSSASGLLAWAPLPVDC*HGLPND
Trigger: GTCATTGGGGAGCCCATGCCAACAATCCACTGGCAG...GGGAGCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp CAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGGAGTCAGGTCTTGTTaGTTCTTCTGCCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: QCSRGQDHHSGVTWDWSQGVRSC*FFCQWI
Trigger: AATCCACTGGCAGAAGAACCAACAAGACCTGACTCC...CTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp AATGACTGTCAAGTCCTTGGGAGCAGAGGTGGGGGCTGCTTCATACGTGGTGGCGGAGTCACCTGGGATTaGAGTCAGGTCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: NDCQVLGSRGGGCFIRGGGVTWD*SQVLLV
Trigger: AACCAACAAGACCTGACTCCAATCCCAGGTGACTCC...GCCACCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGGACTTGACAGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp TCCACATGGCCCAAGTTTCCATTCCTTGGAATCCATGAGGCCAAGAACCCCAGGCACTCGGGAGTCACCTaGGATTGGAGTCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: STWPKFPFLGIHEAKNPRHSGVT*DWSQVL
Trigger: CAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTG...CCTGGGGTTCTTGGCCTCATGGATTCCAAGGAATGGAAACTTGGGCCATGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR CCA 90 bp AATGACTGTCAAGTCCTTGGGAGCAGAGGTGGGGGCTGCTTCATACGTGGTGGCAGCTGTGCACTGGTCTaGGCATTTCCAGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: NDCQVLGSRGGGCFIRGGSCALV*AFPASF
Trigger: AAATGAGGCTGGAAATGCCCAGACCAGTGCACAGCT...GCCACCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGGACTTGACAGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp GGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCCTGCTTCATACGTGGTaGCATGTGCAGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: GCQLTMTARGFPSLVMTVLLHTW*HVQSCS
Trigger: GGAGCATGACTGCACATGCCACCACGTATGAAGCAG...GACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp AACCCCAGGTCAGAGAATAAAAGGCTTGCTGCCATCTTGGGAGTGGCCTGCCGCCCTCAGTGGTCCACATaGCCCAAGTTTCCATTCCTT +
Preference number: 4 (lower is better)
Translates to: NPRSENKRLAAILGVACRPQWST*PKFPFL
Trigger: AAGGAATGGAAACTTGGGCCATGTGGACCACTGAGG...GCGGCAGGCCACTCCCAAGATGGCAGCAAGCCTTTTATTCTCTGACCTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579349.1
3UTR CAA 72 bp AGTGAGTTTGGGGCCTGGGGACAGCTGCATCGGCTGTaGCAACTCTCTAGCGAGTGTCATCCATCCATATAC +
Preference number: 4 (lower is better)
Translates to: SEFGAWGQLHRL*QLSSECHPSIY
Trigger: GTATATGGATGGATGACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCCAGGCCCCAAACTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS-3UTR TCA 90 bp AGTAGCACTGTGTCTCCCATGAAGGCTGTGACAGATTCTGTCTGTGAAAGGAACCCGGTTGGAGTCGGCTaGTCTGCAATGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SSTVSPMKAVTDSVCERNPVGVG*SAMLQR
Trigger: CCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGG...GTTCCTTTCACAGACAGAATCTGTCACAGCCTTCATGGGAGACACAGTGCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR TCA 90 bp CCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGGCCACCTTGATGGGTTaGGAACTCTCTCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLKKIYIFLIRAAASAKQATLMG*ELSPGP
Trigger: GGGACCGGGAGAGAGTTCTCAACCCATCAAGGTGGC...CTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAGTTGTCTGCCCAGCTaGCCCTCACAGCATCATGGG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKESCLPS*PSQHHG
Trigger: CCCATGATGCTGTGAGGGTCAGCTGGGCAGACAACT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTCCCAGTTGGGTTTCTaGCTGGCTGTGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKESQLGF*LAVADW
Trigger: CCAGTCAGCCACAGCCAGTCAGAAACCCAACTGGGA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGTCTTGTTGGTTCTTCTaGCAGTGGATTGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: QCSRGQDHHSGVTWDWSQSCWFF*QWIVGM
Trigger: CATGCCAACAATCCACTGGCAGAAGAACCAACAAGA...CTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR GCA 90 bp CACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGCGTCACGCCAGTGTCTaGTTCATCAGGTGTATGGTC +
Preference number: 4 (lower is better)
Translates to: HNDGTRLPFPSNDCQVLGRHASV*FIRCMV
Trigger: GACCATACACCTGATGAAGCAGACACTGGCGTGACG...CCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGCCCGTTTCTTTCTCTaGTGGGCTGAAGAGCGTCGG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEARFFL*WAEERR
Trigger: CCGACGCTCTTCAGCCCAGCAGAGAAAGAAACGGGC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGGCCGGAGAGTGAACTaGGGGTGGGGATATCCACAG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCGRRVN*GWGYPQ
Trigger: CTGTGGATATCCCCACCCGCAGTTCACTCTCCGGCC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTTTCTCCACCTCCCCTaGGCCTCTGCTGCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYFLHLP*ASAAFE
Trigger: TTCGAAGGCAGCAGAGGCGCAGGGGAGGTGGAGAAA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR GCA 90 bp GTGAGTTTGGGGCCTGGGGACAGCTGCATCGGCTGTTGCAACTCTCTAGCGAGTCCTCACATTTCCCTCTaGTACTGCAACTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VSLGPGDSCIGCCNSLASPHISL*YCNFCC
Trigger: ACAGCAAAAGTTGCAGTAGCAGAGGGAAATGTGAGG...ACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCCAGGCCCCAAACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS-3UTR GCA 90 bp GGGGACAGCTGCATCGGCTGTTGCAACTCTCTAGCGAGTGTCATCCATCCATATAGCTGCATCGGCTGTTaGAACTCTCTAGCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: GDSCIGCCNSLASVIHPYSCIGC*NSLASV
Trigger: GACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCT...ATATGGATGGATGACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS-3UTR CCA 90 bp CCCCGGTTGGAGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGCTGGCTTGTGGTGTCTaGAATGAAGTATGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: PRLESADLQCSRGQDHHSLACGV*NEVCFV
Trigger: TACAAAACATACTTCATTCCAGACACCACAAGCCAG...CGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp GGGAGGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACGGAGTCAGGTCTTGTTaGTTCTTCTGCCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: GRLPTHNDGTRLPFPSNDGVRSC*FFCQWI
Trigger: AATCCACTGGCAGAAGAACCAACAAGACCTGACTCC...GTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp CCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGAGTCACCTGGGATTaGAGTCAGGTCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PLGSHLGLESGLVGSSASGVTWD*SQVLLV
Trigger: AACCAACAAGACCTGACTCCAATCCCAGGTGACTCC...ACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAGGGACCACATCTCTaGGAGCCGAAGGGAGGACAC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCQGPHL*EPKGGH
Trigger: GTGTCCTCCCTTCGGCTCCCAGAGATGTGGTCCCTG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTTTCGCTTCTGCAGGTaGGCGCCAGCTGAGACGGAC +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVFRFCR*APAETD
Trigger: GTCCGTCTCAGCTGGCGCCCACCTGCAGAAGCGAAA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCCTTGGGAGCAGAGGTaGGGGCTGCTTCATACGTGG +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVPWEQR*GLLHTW
Trigger: CCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATAGCCTGTACACCTACTaGTGGGAGCATGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSLYTY*WEHGGG
Trigger: TCCACCCCCATGCTCCCACCAGTAGGTGTACAGGCT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGGGGATGGTTCTGCTTaGTGCCTCCTCGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYGDGSA*CLLAAR
Trigger: TCTAGCAGCGAGGAGGCACCAAGCAGAACCATCCCC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGGCAGAGCGGCTGGTTaGCTGTCAGGTATCACCCAA +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEGRAAG*LSGITQ
Trigger: TTGGGTGATACCTGACAGCCAACCAGCCGCTCTGCC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGGGACCAAGAGGAGATaGAAGGCAATCCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEGTKRR*KAILWP
Trigger: CGGCCACAGGATTGCCTTCCATCTCCTCTTGGTCCC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR CCA 90 bp TTTCCTGGTGTTTCAGGAAATATAAGTGAGTTTGGGGCCTGGGGACAGCTGCATAGTGAGTTTGGGGCCTaGGGACAGCTGCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: FPGVSGNISEFGAWGQLHSEFGA*GQLHRL
Trigger: CAGCCGATGCAGCTGTCCCCAGGCCCCAAACTCACT...ATGCAGCTGTCCCCAGGCCCCAAACTCACTTATATTTCCTGAAACACCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS-3UTR CCA 90 bp TTGGAGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCCTCCCCAGCAATGATTaGGCTGTAGAAAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: LESADLQCSRGQDHHSGVLPSND*AVEKCQ
Trigger: CTGACATTTTTCTACAGCCCAATCATTGCTGGGGAG...GACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581559.1
3UTR CAA 72 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATaGGCCAGTGCACCATATGACATGTGGAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQAT*ASAPYDMWSWP
Trigger: TGGCCAGCTCCACATGTCATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CAA 72 bp AACCTCAGTGGTCCACATGGCCCAAGTTTCCATTCCTaGGAATCCATGAGGCCAAGAACCCCAGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NLSGPHGPSFHS*ESMRPRTPGQR
Trigger: TCTCTGACCTGGGGTTCTTGGCCTCATGGATTCCAAGGAATGGAAACTTGGGCCATGTGGACCACTGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACAGGTGGGCGCCAGCTaGGACGGACAAATCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQQVGAS*DGQIGW
Trigger: CCAGCCGATTTGTCCGTCTCAGCTGGCGCCCACCTG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTTTCCCACAGTGAGCTaGAGGGACCCAGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYFPTVS*RDPGCV
Trigger: AACACAGCCTGGGTCCCTTCAGCTCACTGTGGGAAA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATCCAGGGAGACGTTCTaGGGCGGGGCACTTGGCACG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQSRETF*GGALGT
Trigger: CGTGCCAAGTGCCCCGCCTCAGAACGTCTCCCTGGA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCATTGACTGTCATGGCTaGCACCTGGAAACTGTACTG +
Preference number: 4 (lower is better)
Translates to: GCQLTMTARGFPSLVMTVIDCHG*HLETVL
Trigger: CAGTACAGTTTCCAGGTGTCAGCCATGACAGTCAAT...GACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTTCCTCCCCGCATTGTaGCGGCATCAGAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEFLPAL*RHQKVL
Trigger: CAGAACCTTCTGATGCCGTCACAATGCGGGGAGGAA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTAGTTGTCTGCCCAGCTaGCCCTCACAGCATCATGGG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCSCLPS*PSQHHG
Trigger: CCCATGATGCTGTGAGGGTCAGCTGGGCAGACAACT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCTTTCTCTGCTGGGCTaGAGAGCGTCGGGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKELSLLG*RASGAN
Trigger: ATTTGCACCCGACGCTCTTCAGCCCAGCAGAGAAAG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCTTTCTCTGCTGGGCTaGAGAGCGTCGGGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYLSLLG*RASGAN
Trigger: ATTTGCACCCGACGCTCTTCAGCCCAGCAGAGAAAG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCCAAAGTGGTCCCTCTaGGGTATGGAACACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYPKWSL*GMEHCS
Trigger: GCTGCAGTGTTCCATACCTCAGAGGGACCACTTTGG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCTGGTCTCCCCAGCAATaGTTGGGCTGTAGAAAAATG +
Preference number: 4 (lower is better)
Translates to: TTTRESPGIGVRSCWFFCWSPQQ*LGCRKM
Trigger: CATTTTTCTACAGCCCAATCATTGCTGGGGAGACCA...GCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581559.1
CDS-3UTR GCA 90 bp AGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTCCATTTGAAAGTTGCTaGTTCCTTTCATCCATTCCC +
Preference number: 4 (lower is better)
Translates to: SRLICNAPEGKTTTRESPPFESC*FLSSIP
Trigger: GGGAATGGATGAAAGGAAGCAGCAACTTTCAAATGG...AGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR GCA 90 bp GATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGCCATTTGAAAGTTGCTaGTTCCTTTCATCCATTCCC +
Preference number: 4 (lower is better)
Translates to: DLQCSRGQDHHSGVTWDWPFESC*FLSSIP
Trigger: GGGAATGGATGAAAGGAAGCAGCAACTTTCAAATGG...CCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR GCA 90 bp AGAGGTGGGGGCTGCTTCATACGTGGTGGCATGTGCAGTCATGCTCCAAGTACTGAGGTAGATACAGCTTaGAGGTTTTCTACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RGGGCFIRGGMCSHAPSTEVDTA*RFSTGP
Trigger: AGGGCCAGTAGAAAACCTGCAAGCTGTATCTACCTC...AGTACTTGGAGCATGACTGCACATGCCACCACGTATGAAGCAGCCCCCACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAGCAGAGGTGGGGGCTaGTTCATACGTGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVSRGGG*FIRGGM
Trigger: CATGCCACCACGTATGAAGCAGCCCCCACCTCTGCT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGTCCCCCGGTTGGAGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCCTGGCTTGTGGTGTCTaGAATGAAGTATGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: MSPGWSRLICNAPEGKTTLACGV*NEVCFV
Trigger: TACAAAACATACTTCATTCCAGACACCACAAGCCAG...GGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGGGGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp TCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCACTCCTTTTGAGGACACTGGAGCTTaGGATAGCAGGCTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: STFRVLKRIGSESGPTPFEDTGA*DSRLRD
Trigger: GTCCCTAAGCCTGCTATCCCAAGCTCCAGTGTCCTC...AAAAGGAGTGGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGAGGACACTGGAGCTTaGGATAGCAGGCTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEEDTGA*DSRLRD
Trigger: GTCCCTAAGCCTGCTATCCCAAGCTCCAGTGTCCTC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGGGGATATCCACAGGTaGGAGACGGGAGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCGDIHR*ETGGFL
Trigger: CAGGAATCCTCCCGTCTCCCACCTGTGGATATCCCC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTGGGGGCAGCATAGGTaGTTGTTGGGTAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYWGQHR*LLGSWS
Trigger: GGACCAACTACCCAACAACCACCTATGCTGCCCCCA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGGGGATGGTTCTGCTTaGTGCCTCCTCGCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVGDGSA*CLLAAR
Trigger: TCTAGCAGCGAGGAGGCACCAAGCAGAACCATCCCC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGCGGAGTGGGTGAGTTaGTCGAACACAAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCAEWVS*SNTSCG
Trigger: CCCACAGCTTGTGTTCGACCAACTCACCCACTCCGC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTGGTGGCAGAGCGGCTaGTTGGCTGTCAGGTATCAC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCWWQSG*LAVRYH
Trigger: GTGATACCTGACAGCCAACCAGCCGCTCTGCCACCA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGGGAGAAATGAGTTCTaGTGGCAGAGCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYGRNEF*WQSGWL
Trigger: CAACCAGCCGCTCTGCCACCAGAACTCATTTCTCCC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGCTCTCACTTGTTACTaGGGTGTCCGCCAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCALTCY*GVRQRC
Trigger: ACACCGCTGGCGGACACCCCAGTAACAAGTGAGAGC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGAGCAATTCCCAAGGCCAGATaGATGCCATCTTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: MTARGFPSLVMTVKSLGAIPKAR*MPSFFH
Trigger: GTGGAAGAAAGATGGCATTCATCTGGCCTTGGGAAT...TGCTCCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp GGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGATTCCCAAGGCCAGATaGATGCCATCTTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GSHLGLESGLVGSSASGLIPKAR*MPSFFH
Trigger: GTGGAAGAAAGATGGCATTCATCTGGCCTTGGGAAT...CAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR TCA 90 bp CACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGGGCTGGATTTCGAGCTaGGCATCGGTAAATTCCAAT +
Preference number: 4 (lower is better)
Translates to: HNDGTRLPFPSNDCQVLGGWISS*ASVNSN
Trigger: ATTGGAATTTACCGATGCTCAGCTCGAAATCCAGCC...CCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTTTCCCACAGTGAGCTaGAGGGACCCAGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCFPTVS*RDPGCV
Trigger: AACACAGCCTGGGTCCCTTCAGCTCACTGTGGGAAA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGTGGTCCAGTACCATTaGCTGTCATGGCTGACACCT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEVVQYH*LSWLTP
Trigger: AGGTGTCAGCCATGACAGTCAATGGTACTGGACCAC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAGGTTGCTGTTCTTCTaGGGAGTGACACTGCCATGC +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKERLLFF*GVTLPC
Trigger: GCATGGCAGTGTCACTCCTCAGAAGAACAGCAACCT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGAAACCTCGGTCCACTaGGAGTGTTGGGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCETSVH*ECWEWH
Trigger: GTGCCATTCCCAACACTCTCAGTGGACCGAGGTTTC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCTAGAATGCTCAGGCTaGGATGGGGGCAGCATAGGT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVLECSG*DGGSIG
Trigger: ACCTATGCTGCCCCCATCTCAGCCTGAGCATTCTAG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGGCCAGTGCACCATATaGCATGTGGAGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCGQCTI*HVELAI
Trigger: AATGGCCAGCTCCACATGTCATATGGTGCACTGGCC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCTTGAAGATGCGCGCTaGACAAGGAAGCTCCGAAGA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYLEDAR*TRKLRR
Trigger: TCTTCGGAGCTTCCTTGTTCAGCGCGCATCTTCAAG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR GCA 90 bp TCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCGAACCTCAGTGGTCCTaGTACTGCAACTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SGCSTFRVLKRIGSESGPEPQWS*YCNFCC
Trigger: ACAGCAAAAGTTGCAGTAGCAGGACCACTGAGGTTC...GGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGTTCCCTTTCGCTTCTaGAGGTGGGCGCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSVPFRF*RWAPAE
Trigger: CTCAGCTGGCGCCCACCTGCAGAAGCGAAAGGGAAC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCCTGTGTTGTATTCAATaGTCGTTCCCTGTTGTCACC +
Preference number: 4 (lower is better)
Translates to: GCQLTMTARGFPSLVMTVLCCIQ*SFPVVT
Trigger: GGTGACAACAGGGAACGAGCATTGAATACAACACAG...GACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTTTCCATCTCACCCCTaGGGGTCGTCTTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYFPSHP*GSSFCV
Trigger: GACACAGAAAGACGACCCGCAGGGGTGAGATGGAAA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGCAGAGGTGGGGGCTaGTTCATACGTGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: FLSRKFTSSLSEPQPQPSSRGGG*FIRGGM
Trigger: CATGCCACCACGTATGAAGCAGCCCCCACCTCTGCT...GCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGGCTGCCCTTCCTTTTaGCAGCACTGTGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEGCPSF*QHCGWP
Trigger: GGGCCACCCACAGTGCTGGCAAAAGGAAGGGCAGCC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGGACATAGAGCTCCCTaGTTCCTCAGTGTCTTGACC +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEGHRAP*FLSVLT
Trigger: GGTCAAGACACTGAGGAAGCAGGGAGCTCTATGTCC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGGCCGGAGAGTGAACTaGGGGTGGGGATATCCACAG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQGRRVN*GWGYPQ
Trigger: CTGTGGATATCCCCACCCGCAGTTCACTCTCCGGCC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTCACCCAACGCTAGTTaGCAAGGAGAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKESPNAS*QGELRE
Trigger: CTCCCTGAGTTCTCCTTGGCAACTAGCGTTGGGTGA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGCATGGGCTCCCCACAAAGACCTGCTACTaGAACTTTTGCTGTCCGACT +
Preference number: 4 (lower is better)
Translates to: WSQVLLVLLPVDCWHGLPTKTCY*NFCCPT
Trigger: AGTCGGACAGCAAAAGTTGCAGTAGCAGGTCTTTGT...GGGGAGCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR CCA 90 bp GGGGACAGCTGCATCGGCTGTTGCAACTCTCTAGCGAGTGTCATCCATCCATATGTAAAGTCCCTCATCTaGCTTGTGGTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GDSCIGCCNSLASVIHPYVKSLI*LVVSGM
Trigger: CATTCCAGACACCACAAGCCAGATGAGGGACTTTAC...ATATGGATGGATGACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCTGCCAGTGGATTGTTaGCATGGGCTCCCCAATGAC +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVLPVDC*HGLPND
Trigger: GTCATTGGGGAGCCCATGCCAACAATCCACTGGCAG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTGGAGTCAGGTCTTGTTaGTTCTTCTGCCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: QDHHSGVTWDWSQVLLVLGVRSC*FFCQWI
Trigger: AATCCACTGGCAGAAGAACCAACAAGACCTGACTCC...AAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCCAATGTCCCCCGGTTaGAGTCGGCTGATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVPMSPG*SRLICN
Trigger: ATTGCAGATCAGCCGACTCCAACCGGGGGACATTGG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TTTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGGGACCACATCTCTaGGAGCCGAAGGGAGGACAC +
Preference number: 4 (lower is better)
Translates to: FPLKKIYIFLIRAAASAKQGPHL*EPKGGH
Trigger: GTGTCCTCCCTTCGGCTCCCAGAGATGTGGTCCCTG...CTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp ATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGAGCACTGCAGTATACCAGTTaGAAGGTGGTCCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: MTARGFPSLVMTVKSLGALQYTS*KVVQYH
Trigger: ATGGTACTGGACCACCTTCCAACTGGTATACTGCAG...TGCTCCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp GGGAGGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACCACATGAAGAGAGCTTaGTTGATCAGGAACTTGAGA +
Preference number: 4 (lower is better)
Translates to: GRLPTHNDGTRLPFPSNDHMKRA*LIRNLR
Trigger: TCTCAAGTTCCTGATCAACCAAGCTCTCTTCATGTG...GTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTCGCACCACGATGTTTaGGTTCAAGGGAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKESHHDV*VQGRSP
Trigger: TGGACTCCTCCCTTGAACCCAAACATCGTGGTGCGA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTCGCACCACGATGTTTaGGTTCAAGGGAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSHHDV*VQGRSP
Trigger: TGGACTCCTCCCTTGAACCCAAACATCGTGGTGCGA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCTGCTTCATACGTGGTaGCATGTGCAGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYLLHTW*HVQSCS
Trigger: GGAGCATGACTGCACATGCCACCACGTATGAAGCAG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGGGGGTGGAGAGATCTaGGACCGAGGTGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSGGGEI*DRGGEI
Trigger: GATTTCCCCACCTCGGTCCCAGATCTCTCCACCCCC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGTGGGAGCATGGGGGTaGAGAGATCTGGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSVGAWG*RDLGPR
Trigger: CCTCGGTCCCAGATCTCTCCACCCCCATGCTCCCAC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGTGGGAGCATGGGGGTaGAGAGATCTGGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAVGAWG*RDLGPR
Trigger: CCTCGGTCCCAGATCTCTCCACCCCCATGCTCCCAC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCACTTGCAGAAAAGCTaGTTCTCCACCGGACGGTGT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEHLQKS*FSTGRC
Trigger: ACACCGTCCGGTGGAGAACCAGCTTTTCTGCAAGTG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCTTTTGCCAGCACTGTaGGTGGCCCGTTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKELLPAL*VARFFL
Trigger: GAGAAAGAAACGGGCCACCCACAGTGCTGGCAAAAG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCTTGGCAACTTTGGATaGGAGAGTCCCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYLGNFG*ESPFLQ
Trigger: CTGCAGGAAGGGACTCTCCCATCCAAAGTTGCCAAG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGCGTTGGCACCGGGATaGCGCTCACGACAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEALAPG*RSRQQD
Trigger: ATCCTGCTGTCGTGAGCGCCATCCCGGTGCCAACGC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGCGTTGGCACCGGGATaGCGCTCACGACAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQALAPG*RSRQQD
Trigger: ATCCTGCTGTCGTGAGCGCCATCCCGGTGCCAACGC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAGGATTCCTGGGTACTaGGCACTTTCTAGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKERIPGY*ALSSVG
Trigger: GCCAACGCTAGAAAGTGCCCAGTACCCAGGAATCCT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAGAGTGAACTGCGGGTaGGGATATCCACAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVRVNCG*GYPQVG
Trigger: TCCCACCTGTGGATATCCCCACCCGCAGTTCACTCT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTATGCTCAGGCTGAGATaGGGGCAGCATAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVMLRLR*GQHRWL
Trigger: CAACCACCTATGCTGCCCCCATCTCAGCCTGAGCAT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGTCGAACACAAGCTGTaGGGATGGTTCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEVEHKL*GWFCLV
Trigger: CACCAAGCAGAACCATCCCCACAGCTTGTGTTCGAC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATAGGAAGAGTGGGCCCTaGCTGAGACAAAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYRKSGP*LRQKWC
Trigger: ACACCACTTTTGTCTCAGCCAGGGCCCACTCTTCCT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCACAGTGAGATCCCTTaGCCCATGCCCCTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYHSEIP*PMPLCL
Trigger: TAAACACAGGGGCATGGGCCAAGGGATCTCACTGTG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACCGGTTGGAGTCGGCTaGTCTGCAATGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQPVGVG*SAMLQR
Trigger: CCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGCCACCTTGATGGGTTaGGAACTCTCTCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEATLMG*ELSPGP
Trigger: GGGACCGGGAGAGAGTTCTCAACCCATCAAGGTGGC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGCCACCTTGATGGGTTaGGAACTCTCTCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAATLMG*ELSPGP
Trigger: GGGACCGGGAGAGAGTTCTCAACCCATCAAGGTGGC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCTCAAGGAACACAAAATaGCAGATTGAGCCACCATAC +
Preference number: 4 (lower is better)
Translates to: GCQLTMTARGFPSLVMTVSRNTK*QIEPPY
Trigger: GTATGGTGGCTCAATCTGTCATTTTGTGTTCCTTGA...GACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTTAACTGAGTGGTCCTaGTGGGTGACCTGTACACTG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKELTEWS*WVTCTL
Trigger: CAGTGTACAGGTCACCCATCAGGACCACTCAGTTAA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGAACAGCCCTCTCTTTaGCATCAGATTTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEEQPSL*HQISFP
Trigger: CGGGAAGGAAATCTGATGTCAAAGAGAGGGCTGTTC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCTGCCTGTGGTTGCATaGAGGGAACTGAGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVLPVVA*RELSER
Trigger: CCTTTCACTCAGTTCCCTTCATGCAACCACAGGCAG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGGGAAGACAGCTCTCTaGGGGGCTCGCAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQGKTAL*GARKSS
Trigger: TGATGACTTGCGAGCCCCTCAGAGAGCTGTCTTCCC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR GCA 90 bp GGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCCCATTTGAAAGTTGCTaGTTCCTTTCATCCATTCCC +
Preference number: 4 (lower is better)
Translates to: GCQLTMTARGFPSLVMTVPFESC*FLSSIP
Trigger: GGGAATGGATGAAAGGAAGCAGCAACTTTCAAATGG...GACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCAGTGGTCCTGCTACTaGAACTTTTGCTGTCCGACT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEQWSCY*NFCCPT
Trigger: AGTCGGACAGCAAAAGTTGCAGTAGCAGGACCACTG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGATCGGCTGATCTGCAATaGTCCAGAGGGCAAGACCAC +
Preference number: 4 (lower is better)
Translates to: LSRKFTSSLSEPQPQPSRSADLQ*SRGQDH
Trigger: GTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGA...TCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp ATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGAGCACTGTGGACACCTCAGTaGAGAACAATCTGTAACCTT +
Preference number: 4 (lower is better)
Translates to: MTARGFPSLVMTVKSLGALWTPQ*RTICNL
Trigger: AAGGTTACAGATTGTTCTGCACTGAGGTGTCCACAG...TGCTCCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTTTCCATCTCACCCCTaGGGGTCGTCTTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCFPSHP*GSSFCV
Trigger: GACACAGAAAGACGACCCGCAGGGGTGAGATGGAAA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGAGCAATTCTCTGGAGTCTCTaGAGTATACCAGTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: MTARGFPSLVMTVKSLGAILWSL*SIPVGR
Trigger: CCTTCCAACTGGTATACTGCAGAGACTCCAGAGAAT...TGCTCCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTGGCATGTGCAGTCATaGTCCAAGTACTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYWHVQS*SKYWTF
Trigger: GAAGGTCCAGTACTTGGAGCATGACTGCACATGCCA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGCCCGTTTCTTTCTCTaGTGGGCTGAAGAGCGTCGG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQARFFL*WAEERR
Trigger: CCGACGCTCTTCAGCCCAGCAGAGAAAGAAACGGGC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGACCTGAATGAGAGGTaGTTTTGCTTCCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEDLNER*FCFPVG
Trigger: CCCAACTGGGAAGCAAAAGCACCTCTCATTCAGGTC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAACTGTGGGGATGGTTCTaGTTGGTGCCTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWELWGWF*LVPPRC
Trigger: GCAGCGAGGAGGCACCAAGCAGAACCATCCCCACAG...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACTGTGGGGATGGTTCTaGTTGGTGCCTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIALWGWF*LVPPRC
Trigger: GCAGCGAGGAGGCACCAAGCAGAACCATCCCCACAG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGGGTCTGGTGGCCAATaGTTGCCAACACTGACCCTG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSGSGGQ*LPTLTL
Trigger: CAGGGTCAGTGTTGGCAAGCATTGGCCACCAGACCC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAAGTCCTTCAGAGAGTaGAACTGGAAGTCTGCCACG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEKSFRE*NWKSAT
Trigger: CGTGGCAGACTTCCAGTTGCACTCTCTGAAGGACTT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCGCGAGAGCTGGAGATaGTGTTGGTTTTTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYRESWR*CWFFFR
Trigger: TCGGAAGAAAAACCAACAGCATCTCCAGCTCTCGCG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR GCA 90 bp AACCCCAGGTCAGAGAATAAAAGGCTTGCTGCCATCTTGGGAGTGGCCTGCCGCCTAAGAACAAAGACCTaGTACTGCAACTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NPRSENKRLAAILGVACRLRTKT*YCNFCC
Trigger: ACAGCAAAAGTTGCAGTAGCAGGTCTTTGTTCTTAG...GCGGCAGGCCACTCCCAAGATGGCAGCAAGCCTTTTATTCTCTGACCTGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTGGTTCTTCTGCCAGTaGATTGTTGGCATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCWFFCQ*IVGMGS
Trigger: GGAGCCCATGCCAACAATCCACTGGCAGAAGAACCA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CCCAAGTTTCCATTCCTTGGAATCCATGAGGCCAAGAACCCCAGGTCAGAGAATGGAGTCACCTGGGATTaGAGTCAGGTCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PKFPFLGIHEAKNPRSENGVTWD*SQVLLV
Trigger: AACCAACAAGACCTGACTCCAATCCCAGGTGACTCC...ATTCTCTGACCTGGGGTTCTTGGCCTCATGGATTCCAAGGAATGGAAACTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTTCCTGTTCTTGAGCTaGCTGGATTTCGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYFLFLS*LDFELS
Trigger: GCTCAGCTCGAAATCCAGCCAGCTCAAGAACAGGAA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCACTTTTTAGACCTGAGTTaGATGACTTCCTCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: RVFHFQSPEEDRIREWPHFLDLS*MTSSPR
Trigger: ACGAGGCGAGGAAGTCATCCAACTCAGGTCTAAAAA...GTGGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACAGGGACCACATCTCTaGGAGCCGAAGGGAGGACAC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQQGPHL*EPKGGH
Trigger: GTGTCCTCCCTTCGGCTCCCAGAGATGTGGTCCCTG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCATTTCGCTTCTGCAGGTaGGCGCCAGCTGAGACGGAC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAFRFCR*APAETD
Trigger: GTCCGTCTCAGCTGGCGCCCACCTGCAGAAGCGAAA...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGGTGTACATGGCTTCTaGCTTCAGGTTTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYGVHGF*LQVSHS
Trigger: ACTGTGGGAAACCTGAAGCCAGAAGCCATGTACACC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCACTCCTTTTTCTGTAACCTTGGACTaGACCGTTTGCATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: STFRVLKRIGSESGPTPFSVTLD*TVCIGR
Trigger: CCTGCCTATGCAAACGGTCCAGTCCAAGGTTACAGA...AAAAGGAGTGGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTCTGTAACCTTGGACTaGACCGTTTGCATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSVTLD*TVCIGR
Trigger: CCTGCCTATGCAAACGGTCCAGTCCAAGGTTACAGA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCTGCTTCATACGTGGTaGCATGTGCAGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCLLHTW*HVQSCS
Trigger: GGAGCATGACTGCACATGCCACCACGTATGAAGCAG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACCTTGGGAGCAGAGGTaGGGGCTGCTTCATACGTGG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSPWEQR*GLLHTW
Trigger: CCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGATCTGGGACCGAGGTaGGGAAATCATCAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEDLGPR*GNHQAK
Trigger: CTTTGCTTGATGATTTCCCCACCTCGGTCCCAGATC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGATCTGGGACCGAGGTaGGGAAATCATCAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYDLGPR*GNHQAK
Trigger: CTTTGCTTGATGATTTCCCCACCTCGGTCCCAGATC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGGGGGTGGAGAGATCTaGGACCGAGGTGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAGGGEI*DRGGEI
Trigger: GATTTCCCCACCTCGGTCCCAGATCTCTCCACCCCC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCTGTACACCTACTGGTaGGAGCATGGGGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSLYTYW*EHGGGE
Trigger: CTCTCCACCCCCATGCTCCCACCAGTAGGTGTACAG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAGCCTGTACACCTACTaGTGGGAGCATGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQSLYTY*WEHGGG
Trigger: TCCACCCCCATGCTCCCACCAGTAGGTGTACAGGCT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTACCCTCACAGCATCATaGGTAAGAGCCACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCTLTAS*VRATAC
Trigger: ACAGGCTGTGGCTCTTACCCATGATGCTGTGAGGGT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGACTGGTGTGAGGTCTTaGCAACTTTGGATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKETGVRS*QLWMGE
Trigger: CTCTCCCATCCAAAGTTGCCAAGACCTCACACCAGT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCGACAGCAGGATTGTTaGACTGGGCATCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVRQQDC*TGHPWE
Trigger: TTCCCATGGATGCCCAGTCCAACAATCCTGCTGTCG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGCGGAGTGGGTGAGTTaGTCGAACACAAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSAEWVS*SNTSCG
Trigger: CCCACAGCTTGTGTTCGACCAACTCACCCACTCCGC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAGCAAAGCTGCGGAGTaGGTGAGTTGGTCGAACACA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVSKAAE*VSWSNT
Trigger: TGTGTTCGACCAACTCACCCACTCCGCAGCTTTGCT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAGGAAGAGTGGGCCCTaGCTGAGACAAAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVRKSGP*LRQKWC
Trigger: ACACCACTTTTGTCTCAGCCAGGGCCCACTCTTCCT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGAGGCTGTTTTCACATaGGTCTTAGGAAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEEAVFT*VLGRVG
Trigger: GCCCACTCTTCCTAAGACCCATGTGAAAACAGCCTC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGAAGACAGGCGACATTaGCCAGTGCACCATATGACA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYEDRRH*PVHHMT
Trigger: TGTCATATGGTGCACTGGCCAATGTCGCCTGTCTTC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGTCGGAAGTGTCAGGTaGCACCTGCCCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSVGSVR*HLPLCF
Trigger: GAAGCAGAGGGGCAGGTGCCACCTGACACTTCCGAC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGTCGGAAGTGTCAGGTaGCACCTGCCCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAVGSVR*HLPLCF
Trigger: GAAGCAGAGGGGCAGGTGCCACCTGACACTTCCGAC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGGCAGAGCGGCTGGTTaGCTGTCAGGTATCACCCAA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSGRAAG*LSGITQ
Trigger: TTGGGTGATACCTGACAGCCAACCAGCCGCTCTGCC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CAA 72 bp GGGAGAAGTGGCGATGATGGAACTTCAGTGAAGGCTTaGCCTGGACTGGACATCTCTTCATACTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: GRSGDDGTSVKA*PGLDISSYSAM
Trigger: CATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAGCCTTCACTGAAGTTCCATCATCGCCACTTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGCTGTGTGGCCACCTTaGTGGGTTGAGAACTCTCTC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQAVWPP*WVENSL
Trigger: GAGAGAGTTCTCAACCCATCAAGGTGGCCACACAGC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCTTTCTCCAGTCCTGTaGATAGGTACCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKELSPVL*IGTRGC
Trigger: ACAACCTCTGGTACCTATTCACAGGACTGGAGAAAG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGCTGCCAACTCACAATaGCGGCACGAGGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEAANSQ*RHEASL
Trigger: AAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGCTGCCAACTCACAATaGCGGCACGAGGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQAANSQ*RHEASL
Trigger: AAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCATCCCAGTTGGGTTTCTaGCTGGCTGTGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIASQLGF*LAVADW
Trigger: CCAGTCAGCCACAGCCAGTCAGAAACCCAACTGGGA...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGAAACCTCGGTCCACTaGGAGTGTTGGGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSETSVH*ECWEWH
Trigger: GTGCCATTCCCAACACTCTCAGTGGACCGAGGTTTC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCCTTCACTCACTGACTaGCTTCTTCCTGCTCCGAAA +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCPSLTD*LLPAPK
Trigger: TTTCGGAGCAGGAAGAAGTCAGTCAGTGAGTGAAGG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCTAGAATGCTCAGGCTaGGATGGGGGCAGCATAGGT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQLECSG*DGGSIG
Trigger: ACCTATGCTGCCCCCATCTCAGCCTGAGCATTCTAG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGGCCAGTGCACCATATaGCATGTGGAGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQGQCTI*HVELAI
Trigger: AATGGCCAGCTCCACATGTCATATGGTGCACTGGCC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCAACCTATTCCAAACTaGGCACTCAGGATTACCCTC +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYQPIPN*ALRITL
Trigger: GAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGAGTCCTGGATACCATaGACTAGACTCAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCESWIP*TRLSRR
Trigger: CCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTGGAAGTCTGCCACGTaGACGTTATGCAATAGTGGC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCWKSAT*TLCNSG
Trigger: GCCACTATTGCATAACGTTCACGTGGCAGACTTCCA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGATGTTCAGCACACAGTaGGATCCCTTGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQMFSTQ*DPLAHA
Trigger: GGCATGGGCCAAGGGATCTCACTGTGTGCTGAACAT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCCAAAGTGGTCCCTCTaGGGTATGGAACACTGCAGC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQPKWSL*GMEHCS
Trigger: GCTGCAGTGTTCCATACCTCAGAGGGACCACTTTGG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGTCCAGTTATATCACATaGCACCTAGTCTGCTACTGC +
Preference number: 4 (lower is better)
Translates to: VTWDWSQVLLVLLPVDCWSSYIT*HLVCYC
Trigger: GCAGTAGCAGACTAGGTGTCATGTGATATAACTGGA...CCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581559.1
CDS-3UTR GCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTCGGCTGATCTGCAATaGTCCAGAGGGCAAGACCAC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSSADLQ*SRGQDH
Trigger: GTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AATGACTGTCAAGTCCTTGGGAGCAGAGGTGGGGGCTGCTTCATACGTGGTGGCCAAACTCAATATCCATaGTTTCATAGGCATACAGGT +
Preference number: 4 (lower is better)
Translates to: NDCQVLGSRGGGCFIRGGQTQYP*FHRHTG
Trigger: ACCTGTATGCCTATGAAAGCATGGATATTGAGTTTG...GCCACCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGGACTTGACAGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp AGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCACCAAGTATCCGTAAGTTaGTTCCTCCCACTATCTGAA +
Preference number: 4 (lower is better)
Translates to: RVFHFQSPEEDRIREWPHQVSVS*FLPLSE
Trigger: TTCAGATAGTGGGAGGAAGCAACTTACGGATACTTG...GTGGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGAGGTAGATACAGCTTaGAGGTTTTCTACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEEVDTA*RFSTGP
Trigger: AGGGCCAGTAGAAAACCTGCAAGCTGTATCTACCTC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAGCAGAGGTGGGGGCTaGTTCATACGTGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWESRGGG*FIRGGM
Trigger: CATGCCACCACGTATGAAGCAGCCCCCACCTCTGCT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGCTTCCAAGGGAGGCTaGCAACTCACAATGACGGCA +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQASKGG*QLTMTA
Trigger: TGCCGTCATTGTGAGTTGGCAGCCTCCCTTGGAAGC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAGGGACAGAGTTGTCTaGCCAGCTGACCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQRDRVV*PADPHS
Trigger: GCTGTGAGGGTCAGCTGGGCAGACAACTCTGTCCCT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAGGGACAGAGTTGTCTaGCCAGCTGACCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSRDRVV*PADPHS
Trigger: GCTGTGAGGGTCAGCTGGGCAGACAACTCTGTCCCT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGGGTCTGGTGGCCAATaGTTGCCAACACTGACCCTG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQGSGGQ*LPTLTL
Trigger: CAGGGTCAGTGTTGGCAAGCATTGGCCACCAGACCC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATCTGGCCTGCAGGACTaGCTGTGGTTGCATGAAGGG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWESGLQD*LWLHEG
Trigger: CCCTTCATGCAACCACAGGCAGTCCTGCAGGCCAGA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTAAGTCCTTCAGAGAGTaGAACTGGAAGTCTGCCACG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCKSFRE*NWKSAT
Trigger: CGTGGCAGACTTCCAGTTGCACTCTCTGAAGGACTT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACCCCTGCGCCTCTGCTaGCTTCGAAGCCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSPLRLC*LRSLFP
Trigger: AGGAAAAAGGCTTCGAAGGCAGCAGAGGCGCAGGGG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR CCA 90 bp GAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGTAAAGTCCCTCATCTaGCTTGTGGTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: ESPGIGVRSCWFFCQWIVVKSLI*LVVSGM
Trigger: CATTCCAGACACCACAAGCCAGATGAGGGACTTTAC...AACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGGAGTCACCTGGGATTaGAGTCAGGTCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVGVTWD*SQVLLV
Trigger: AACCAACAAGACCTGACTCCAATCCCAGGTGACTCC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATGGTCCCCAATGTCCCCCGGTTaGAGTCGGCTGATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SLTRLIVTPVSASSGVWSPMSPG*SRLICN
Trigger: ATTGCAGATCAGCCGACTCCAACCGGGGGACATTGG...GGACCATACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCCAATGTCCCCCGGTTaGAGTCGGCTGATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSPMSPG*SRLICN
Trigger: ATTGCAGATCAGCCGACTCCAACCGGGGGACATTGG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTTCCTGTTCTTGAGCTaGCTGGATTTCGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVFLFLS*LDFELS
Trigger: GCTCAGCTCGAAATCCAGCCAGCTCAAGAACAGGAA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGAGGACACTGGAGCTTaGGATAGCAGGCTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQEDTGA*DSRLRD
Trigger: GTCCCTAAGCCTGCTATCCCAAGCTCCAGTGTCCTC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCTCGAAAGGTGTACATaGCTTCTGGCTTCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYLERCT*LLASGF
Trigger: GAAACCTGAAGCCAGAAGCCATGTACACCTTTCGAG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTCATACGTGGTGGCATGTGCAGTCATGCTCCAAGTACTGGACCTTCTGTTTTGTTTTCTACTGGCCCTaGAACTTGCAACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHTWWHVQSCSKYWTFCFVFYWP*NLQLRL
Trigger: CAGCCTGAGTTGCAAGTTCCAGGGCCAGTAGAAAAC...AAAACAGAAGGTCCAGTACTTGGAGCATGACTGCACATGCCACCACGTATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp AGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGAACTTCAGGGCTGCTTCATACGTaGTGGCATGTGCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: RKFTSSLSEPQPQPSRTSGLLHT*WHVQSC
Trigger: GCATGACTGCACATGCCACCACGTATGAAGCAGCCC...TGAAGTTCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGGGCTGCTTCATACGTaGTGGCATGTGCAGTCATGC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQGLLHT*WHVQSC
Trigger: GCATGACTGCACATGCCACCACGTATGAAGCAGCCC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATGCCTTGGGAGCAGAGGTaGGGGCTGCTTCATACGTGG +
Preference number: 4 (lower is better)
Translates to: NFINKINRHASVCFIRCMPWEQR*GLLHTW
Trigger: CCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGG...CATACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGGTCGGAGGTCCTTCTaGCTGCCCTTCCTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAGRRSF*LPFLLP
Trigger: TGGCAAAAGGAAGGGCAGCCAGAAGGACCTCCGACC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGGTCGGAGGTCCTTCTaGCTGCCCTTCCTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEGRRSF*LPFLLP
Trigger: TGGCAAAAGGAAGGGCAGCCAGAAGGACCTCCGACC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAGGTCTTGGCAACTTTaGATGGGAGAGTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVRSWQL*MGESLP
Trigger: AGGAAGGGACTCTCCCATCCAAAGTTGCCAAGACCT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGGGATATCCACAGGTaGGAGACGGGAGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSGDIHR*ETGGFL
Trigger: CAGGAATCCTCCCGTCTCCCACCTGTGGATATCCCC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGAGGCTGTTTTCACATaGGTCTTAGGAAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVEAVFT*VLGRVG
Trigger: GCCCACTCTTCCTAAGACCCATGTGAAAACAGCCTC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTCCTCTGTTGGTTTGTaGCTCTCCTCAGACACTTCA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSSVGL*LSSDTS
Trigger: TGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGCACCATATGACATGTaGAGCTGGCCATTTCACCCA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVAPYDM*SWPFHP
Trigger: TGGGTGAAATGGCCAGCTCCACATGTCATATGGTGC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATGGTGGCAGAGCGGCTaGTTGGCTGTCAGGTATCAC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQWWQSG*LAVRYH
Trigger: GTGATACCTGACAGCCAACCAGCCGCTCTGCCACCA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGGGAGAAATGAGTTCTaGTGGCAGAGCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSGRNEF*WQSGWL
Trigger: CAACCAGCCGCTCTGCCACCAGAACTCATTTCTCCC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCTCTCCTTGTGTAGCTaGAACCAAAGCAGGAGATTG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKELSLCS*NQSRRL
Trigger: CAATCTCCTGCTTTGGTTCCAGCTACACAAGGAGAG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATAGGCTTTGCCTGGACTaGACATCTCTTCATACTCAG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYRLCLD*TSLHTQ
Trigger: CTGAGTATGAAGAGATGTCCAGTCCAGGCAAAGCCT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTATTCCGCGCGAGAGCTaGAGATGCTGTTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCIPRES*RCCWFF
Trigger: GAAAAACCAACAGCATCTCCAGCTCTCGCGCGGAAT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR CCA 90 bp GGGCCTGGGGACAGCTGCATCGGCTGTTGCAACTCTCTAGCGAGTGTCATCCATAGTTATAAACTGCCATaGCTATGTTGTCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: GPGDSCIGCCNSLASVIHSYKLP*LCCPNF
Trigger: AAAGTTTGGACAACATAGCCATGGCAGTTTATAACT...ATGGATGACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCCAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTATTCCCAAGGCCAGATaGATGCCATCTTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCIPKAR*MPSFFH
Trigger: GTGGAAGAAAGATGGCATTCATCTGGCCTTGGGAAT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGCTGTGTGGCCACCTTaGTGGGTTGAGAACTCTCTC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSAVWPP*WVENSL
Trigger: GAGAGAGTTCTCAACCCATCAAGGTGGCCACACAGC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCTCTAACAGACAGGATTaGTTCAAGGAACACAAAATG +
Preference number: 4 (lower is better)
Translates to: GCQLTMTARGFPSLVMTVSNRQD*FKEHKM
Trigger: CATTTTGTGTTCCTTGAATCAATCCTGTCTGTTAGA...GACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATTCCTCCCCGCATTGTaGCGGCATCAGAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSFLPAL*RHQKVL
Trigger: CAGAACCTTCTGATGCCGTCACAATGCGGGGAGGAA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCTCAGTGTCTTGACCTaGATGAGAGGTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCLSVLT*MRGAFA
Trigger: AGCAAAAGCACCTCTCATTCAGGTCAAGACACTGAG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAAGCTGCGGAGTGGGTaGGTTGGTCGAACACAAGCT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQKLRSG*VGRTQA
Trigger: AGCTTGTGTTCGACCAACTCACCCACTCCGCAGCTT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAGTGGTCCTGATGGGTaGCCTGTACACTGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSSGPDG*PVHWLE
Trigger: CTCTAACCAGTGTACAGGTCACCCATCAGGACCACT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAGTGGTCCTGATGGGTaGCCTGTACACTGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQSGPDG*PVHWLE
Trigger: CTCTAACCAGTGTACAGGTCACCCATCAGGACCACT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAATGTTCAGCACACAGTaGGATCCCTTGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSMFSTQ*DPLAHA
Trigger: GGCATGGGCCAAGGGATCTCACTGTGTGCTGAACAT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAGGGAGAAGTGGCGATaGTGGAACTTCAGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSREKWR*WNFSEG
Trigger: GCCTTCACTGAAGTTCCATCATCGCCACTTCTCCCT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATAGTTGCAAAGCCCTTTaGATGAGTAGCACTGATCTG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSCKAL*MSSTDL
Trigger: CAGATCAGTGCTACTCATTCAAAGGGCTTTGCAACT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATCGGCTGATCTGCAATaGTCCAGAGGGCAAGACCAC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSSADLQ*SRGQDH
Trigger: GTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAGGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTACATTGGATGGTCTTTaGAGAAAATACAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: GGCQLTMTARGFPSLVMTTLDGL*RKYSCL
Trigger: TAGACAGCTGTATTTTCTGCAAAGACCATCCAATGT...AGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCTGTGTTGTATTCAATaGTCGTTCCCTGTTGTCACC +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYLCCIQ*SFPVVT
Trigger: GGTGACAACAGGGAACGAGCATTGAATACAACACAG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTATACGTGGTGGCATGTaGAGTCATGCTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVIRGGM*SHAPST
Trigger: AGTACTTGGAGCATGACTGCACATGCCACCACGTAT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGCTTCCAAGGGAGGCTaGCAACTCACAATGACGGCA +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSASKGG*QLTMTA
Trigger: TGCCGTCATTGTGAGTTGGCAGCCTCCCTTGGAAGC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGAGAGGTGCTTTTaGTTCCCAGTTGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKENERCF*FPVGFL
Trigger: CAGAAACCCAACTGGGAAGCAAAAGCACCTCTCATT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGAGCTTGCACTGGTTTaGCATGGCATGGTACAGGCT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSELALV*HGMVQA
Trigger: AGCCTGTACCATGCCATGGCAAACCAGTGCAAGCTC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCATCCAATCCTTTGGTaGTATGGCATGAGAGATTCC +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEHPILW*YGMRDS
Trigger: GGAATCTCTCATGCCATAGCACCAAAGGATTGGATG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCCAGAAATGTACTGCTaGTGGCAGAATGCCACTAGT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCPEMYC*WQNATS
Trigger: ACTAGTGGCATTCTGCCAGCAGCAGTACATTTCTGG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTTTCCAGAAATGTACTaGTGCTGGCAGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEFPEMY*CWQNAT
Trigger: AGTGGCATTCTGCCAGCAGCAGTACATTTCTGGAAA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTGCTCTCAGGGAGTCTaGCATTTCTACGGGATTAGA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVCSQGV*HFYGIR
Trigger: TCTAATCCCGTAGAAATGGCAGACTCCCTGAGAGCA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCTCGTGGGTGTCAAGTaGCTAAGGAGAATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVLVGVK*LRRMFH
Trigger: ATGGAACATTCTCCTTAGGCACTTGACACCCACGAG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGTGTATGGCTGCTTCTaGATCTCCAGAAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVVYGCF*ISRKLW
Trigger: CCACAACTTTCTGGAGATGCAGAAGCAGCCATACAC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGTGCAACTGGAAGTCTaGCACGTGAACGTTATGCAA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVVQLEV*HVNVMQ
Trigger: TTGCATAACGTTCACGTGGCAGACTTCCAGTTGCAC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACCTGTGGCCGGGCTGTaGATTAAAAGGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQPVAGL*IKRLRL
Trigger: CAGCCTCAACCTTTTAATGCACAGCCCGGCCACAGG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR CCA 90 bp CACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGCTGGCTTGTGGTGTCTaGAATGAAGTATGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: HNDGTRLPFPSNDCQVLGLACGV*NEVCFV
Trigger: TACAAAACATACTTCATTCCAGACACCACAAGCCAG...CCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp CCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGGTAAAGTCCCTCATCTaGCTTGTGGTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: PLKKIYIFLIRAAASAKQVKSLI*LVVSGM
Trigger: CATTCCAGACACCACAAGCCAGATGAGGGACTTTAC...CTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp TCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGAATGGTTCTTCTGCCAGTaGATTGTTGGCATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SQENLHLPYQSRSLSQAEWFFCQ*IVGMGS
Trigger: GGAGCCCATGCCAACAATCCACTGGCAGAAGAACCA...TTCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTGGTTCTTCTGCCAGTaGATTGTTGGCATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSWFFCQ*IVGMGS
Trigger: GGAGCCCATGCCAACAATCCACTGGCAGAAGAACCA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGGAGTCAGGTCTTGTTaGTTCTTCTGCCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVGVRSC*FFCQWI
Trigger: AATCCACTGGCAGAAGAACCAACAAGACCTGACTCC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAACACTCGGGAGTCACCTaGGATTGGAGTCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEHSGVT*DWSQVL
Trigger: CAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTG...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGAGCACATCTTTTCCTTCAATaGCTACTACATTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: MTARGFPSLVMTVKSLGAHLFLQ*LLHWMV
Trigger: GACCATCCAATGTAGTAGCCATTGAAGGAAAAGATG...TGCTCCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCCAGGTAAAACTTGGTaGAGGATAGCCAGAAACACA +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEPGKTW*RIARNT
Trigger: TGTGTTTCTGGCTATCCTCCACCAAGTTTTACCTGG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTTTTTAGACCTGAGTTaGATGACTTCCTCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYFLDLS*MTSSPR
Trigger: ACGAGGCGAGGAAGTCATCCAACTCAGGTCTAAAAA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTCATCCAATTCACAGTaGGCACAGGCTTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVSSNSQ*AQAFQR
Trigger: TCTCTGGAAAGCCTGTGCCCACTGTGAATTGGATGA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGAACTTCAGACGGACAAATCGGCTaGAAACCAAGACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: RKFTSSLSEPQPQPSRTSDGQIG*KPRQGP
Trigger: TGGTCCCTGTCTTGGTTTCCAGCCGATTTGTCCGTC...TGAAGTTCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGACGGACAAATCGGCTaGAAACCAAGACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQDGQIG*KPRQGP
Trigger: TGGTCCCTGTCTTGGTTTCCAGCCGATTTGTCCGTC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTTGCAGGTTTTCTACTaGCCCTGGAACTTGCAACTC +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVLQVFY*PWNLQL
Trigger: GAGTTGCAAGTTCCAGGGCCAGTAGAAAACCTGCAA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGTACCAGAGGTTGTTTaGCTCCAGTGTTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCVPEVV*LQCFHL
Trigger: GAGATGGAAACACTGGAGCCAAACAACCTCTGGTAC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCACTCCTTTTATACCAGTTGGAAGGTaGTCCAGTACCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: STFRVLKRIGSESGPTPFIPVGR*SSTIDC
Trigger: ACAGTCAATGGTACTGGACCACCTTCCAACTGGTAT...AAAAGGAGTGGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCTGCAGTATACCAGTTaGAAGGTGGTCCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCLQYTS*KVVQYH
Trigger: ATGGTACTGGACCACCTTCCAACTGGTATACTGCAG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCTTCCACTTGATCACTaGAACTCCTCGGTCGGACTC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSLPLDH*NSSVGL
Trigger: GAGTCCGACCGAGGAGTTCCAGTGATCAAGTGGAAG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCTTCCACTTGATCACTaGAACTCCTCGGTCGGACTC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQLPLDH*NSSVGL
Trigger: GAGTCCGACCGAGGAGTTCCAGTGATCAAGTGGAAG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGACCCTCACAGCATCATaGGTAAGAGCCACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQTLTAS*VRATAC
Trigger: ACAGGCTGTGGCTCTTACCCATGATGCTGTGAGGGT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACGTTTCTTTCTCTGCTaGGCTGAAGAGCGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSRFFLC*AEERRV
Trigger: CACCCGACGCTCTTCAGCCCAGCAGAGAAAGAAACG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAACGTTTCTTTCTCTGCTaGGCTGAAGAGCGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWERFFLC*AEERRV
Trigger: CACCCGACGCTCTTCAGCCCAGCAGAGAAAGAAACG...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCTTTTGCCAGCACTGTaGGTGGCCCGTTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSLLPAL*VARFFL
Trigger: GAGAAAGAAACGGGCCACCCACAGTGCTGGCAAAAG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGTTTCTGACTGGCTGTaGCTGACTGGTGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQVSDWL*LTGVRS
Trigger: AGACCTCACACCAGTCAGCCACAGCCAGTCAGAAAC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAGGATTCCTGGGTACTaGGCACTTTCTAGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSRIPGY*ALSSVG
Trigger: GCCAACGCTAGAAAGTGCCCAGTACCCAGGAATCCT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTAGCATAGGTGGTTGTTaGGTAGTTGGTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCSIGGC*VVGPSL
Trigger: GAGTGAAGGACCAACTACCCAACAACCACCTATGCT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATGGGGGCAGCATAGGTaGTTGTTGGGTAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQWGQHR*LLGSWS
Trigger: GGACCAACTACCCAACAACCACCTATGCTGCCCCCA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACACAAGCTGTGGGGATaGTTCTGCTTGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQHKLWG*FCLVPP
Trigger: AGGAGGCACCAAGCAGAACCATCCCCACAGCTTGTG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACACAAGCTGTGGGGATaGTTCTGCTTGGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAHKLWG*FCLVPP
Trigger: AGGAGGCACCAAGCAGAACCATCCCCACAGCTTGTG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGAAATGTACTGCTGCTaGCAGAATGCCACTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCEMYCC*QNATSC
Trigger: GCAACTAGTGGCATTCTGCCAGCAGCAGTACATTTC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAGAAATGAGTTCTGGTaGCAGAGCGGCTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSRNEFW*QSGWLA
Trigger: AGCCAACCAGCCGCTCTGCCACCAGAACTCATTTCT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCACAGTGAGATCCCTTaGCCCATGCCCCTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSHSEIP*PMPLCL
Trigger: TAAACACAGGGGCATGGGCCAAGGGATCTCACTGTG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGGTCCCTCTGAGGTATaGAACACTGCAGCTTTAACA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVGPSEV*NTAALT
Trigger: TGTTAAAGCTGCAGTGTTCCATACCTCAGAGGGACC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGAACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATTTCCCACAGTGAGCTaGAGGGACCCAGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RTSLTRLIVTPVSASSGVFPTVS*RDPGCV
Trigger: AACACAGCCTGGGTCCCTTCAGCTCACTGTGGGAAA...TACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGTGGTCCAGTACCATTaGCTGTCATGGCTGACACCT +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSVVQYH*LSWLTP
Trigger: AGGTGTCAGCCATGACAGTCAATGGTACTGGACCAC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAGGTTGCTGTTCTTCTaGGGAGTGACACTGCCATGC +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWERLLFF*GVTLPC
Trigger: GCATGGCAGTGTCACTCCTCAGAAGAACAGCAACCT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTACATGTTAAAAGGCTaGGCCTGTGATGGCATTAAG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEYMLKG*ACDGIK
Trigger: CTTAATGCCATCACAGGCTCAGCCTTTTAACATGTA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAGGATCTTCCTTAACTaGGTGGTCCTGATGGGTGAC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQRIFLN*VVLMGD
Trigger: GTCACCCATCAGGACCACTCAGTTAAGGAAGATCCT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATAATGCTTATTCCTTCTaGACTGCTTCAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYNAYSF*TASGSS
Trigger: GGAAGATCCTGAAGCAGTTCAGAAGGAATAAGCATT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTTTGGTGCTATGGCATaGGAGATTCCCATGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSFGAMA*EIPMGA
Trigger: AGCACCCATGGGAATCTCTCATGCCATAGCACCAAA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACTGCCTGTGGTTGCATaGAGGGAACTGAGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIALPVVA*RELSER
Trigger: CCTTTCACTCAGTTCCCTTCATGCAACCACAGGCAG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTACAAAAACAGAGACTTaGGTGTATGGCTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCTKTET*VYGCFC
Trigger: GCAGAAGCAGCCATACACTCAAGTCTCTGTTTTTGT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTACAAAAACAGAGACTTaGGTGTATGGCTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVTKTET*VYGCFC
Trigger: GCAGAAGCAGCCATACACTCAAGTCTCTGTTTTTGT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTGGAAGTCTGCCACGTaGACGTTATGCAATAGTGGC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSWKSAT*TLCNSG
Trigger: GCCACTATTGCATAACGTTCACGTGGCAGACTTCCA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGATGATGGAACTTCAGTaGAGGCTTTGCCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQMMELQ*RLCLDW
Trigger: CCAGTCCAGGCAAAGCCTTCACTGAAGTTCCATCAT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAGGGAGAAGTGGCGATaGTGGAACTTCAGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAREKWR*WNFSEG
Trigger: GCCTTCACTGAAGTTCCATCATCGCCACTTCTCCCT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTAGTTGCAAAGCCCTTTaGATGAGTAGCACTGATCTG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCSCKAL*MSSTDL
Trigger: CAGATCAGTGCTACTCATTCAAAGGGCTTTGCAACT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTGACCCATTTGAAAGTTaGTGCTTCCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: GVTWDWSQVLLVLLPVDCDPFES*CFLSSI
Trigger: AATGGATGAAAGGAAGCAGCAACTTTCAAATGGGTC...ACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR GCA 90 bp TCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGAACAGTGGTCCTGCTACTaGAACTTTTGCTGTCCGACT +
Preference number: 4 (lower is better)
Translates to: SQENLHLPYQSRSLSQAEQWSCY*NFCCPT
Trigger: AGTCGGACAGCAAAAGTTGCAGTAGCAGGACCACTG...TTCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCAGTGGTCCTGCTACTaGAACTTTTGCTGTCCGACT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSQWSCY*NFCCPT
Trigger: AGTCGGACAGCAAAAGTTGCAGTAGCAGGACCACTG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTCATACGTGGTGGCATGTGCAGTCATGCTCCAAGTACTGGACCTTCTGTTTTCAAGACTGTGAGCTCTaGAGAGGCACTAATATTCTC +
Preference number: 4 (lower is better)
Translates to: LHTWWHVQSCSKYWTFCFQDCEL*RGTNIL
Trigger: GAGAATATTAGTGCCTCTGCAGAGCTCACAGTCTTG...AAAACAGAAGGTCCAGTACTTGGAGCATGACTGCACATGCCACCACGTATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCAAGACTGTGAGCTCTaGAGAGGCACTAATATTCTC +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVQDCEL*RGTNIL
Trigger: GAGAATATTAGTGCCTCTGCAGAGCTCACAGTCTTG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCTGTGGACACCTCAGTaGAGAACAATCTGTAACCTT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCLWTPQ*RTICNL
Trigger: AAGGTTACAGATTGTTCTGCACTGAGGTGTCCACAG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGAATGGCATGTGCAGTCATaGTCCAAGTACTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SQENLHLPYQSRSLSQAEWHVQS*SKYWTF
Trigger: GAAGGTCCAGTACTTGGAGCATGACTGCACATGCCA...TTCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTTCCTGCAGGGTCAGTaGCAGATGGCTTTTCAATAT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCFLQGQ*QMAFQY
Trigger: ATATTGAAAAGCCATCTGGCACTGACCCTGCAGGAA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGGACATAGAGCTCCCTaGTTCCTCAGTGTCTTGACC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQGHRAP*FLSVLT
Trigger: GGTCAAGACACTGAGGAAGCAGGGAGCTCTATGTCC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGATGGTTCTGCTTGGTaGCTCCTCGCTGCTAGAATG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSDGSAW*LLAARM
Trigger: CATTCTAGCAGCGAGGAGGCACCAAGCAGAACCATC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGATGGTTCTGCTTGGTaGCTCCTCGCTGCTAGAATG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEDGSAW*LLAARM
Trigger: CATTCTAGCAGCGAGGAGGCACCAAGCAGAACCATC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTCTTGGACACAGGTGTaGTGTTTATGGGTAATTGGT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKESWTQV*CLWVIG
Trigger: ACCAATTACCCATAAACAGCACACCTGTGTCCAAGA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGAGCTTGCACTGGTTTaGCATGGCATGGTACAGGCT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEELALV*HGMVQA
Trigger: AGCCTGTACCATGCCATGGCAAACCAGTGCAAGCTC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGGAGTCACCTGGGATTaGAGTCAGGTCTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQGVTWD*SQVLLV
Trigger: AACCAACAAGACCTGACTCCAATCCCAGGTGACTCC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CCACTGATTGTTTCCATAATCCAGTCATCAATTGGGATGTTCTTGTCCAAGGTACACTCGGGAGTCACCTaGGATTGGAGTCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PLIVSIIQSSIGMFLSKVHSGVT*DWSQVL
Trigger: CAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTG...TACCTTGGACAAGAACATCCCAATTGATGACTGGATTATGGAAACAATCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp CTTCATACGTGGTGGCATGTGCAGTCATGCTCCAAGTACTGGACCTTCTGTTTTCCAGGTAAAACTTGGTaGAGGATAGCCAGAAACACA +
Preference number: 4 (lower is better)
Translates to: LHTWWHVQSCSKYWTFCFPGKTW*RIARNT
Trigger: TGTGTTTCTGGCTATCCTCCACCAAGTTTTACCTGG...AAAACAGAAGGTCCAGTACTTGGAGCATGACTGCACATGCCACCACGTATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAGCTGTGCACTGGTCTaGGCATTTCCAGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSSCALV*AFPASF
Trigger: AAATGAGGCTGGAAATGCCCAGACCAGTGCACAGCT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGACGGACAAATCGGCTaGAAACCAAGACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSDGQIG*KPRQGP
Trigger: TGGTCCCTGTCTTGGTTTCCAGCCGATTTGTCCGTC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATGGTCCGGTGTACATGGCTTCTaGCTTCAGGTTTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: SLTRLIVTPVSASSGVWSGVHGF*LQVSHS
Trigger: ACTGTGGGAAACCTGAAGCCAGAAGCCATGTACACC...GGACCATACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGGTGTACATGGCTTCTaGCTTCAGGTTTCCCACAGT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSGVHGF*LQVSHS
Trigger: ACTGTGGGAAACCTGAAGCCAGAAGCCATGTACACC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTACCTCAGACGTCTTTTaGTTCTTAGGGACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCTSDVF*FLGTEL
Trigger: CAACTCTGTCCCTAAGAACCAAAAGACGTCTGAGGT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACACTTGCAGAAAAGCTaGTTCTCCACCGGACGGTGT +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSHLQKS*FSTGRC
Trigger: ACACCGTCCGGTGGAGAACCAGCTTTTCTGCAAGTG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACTTGGCAACTTTGGATaGGAGAGTCCCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIALGNFG*ESPFLQ
Trigger: CTGCAGGAAGGGACTCTCCCATCCAAAGTTGCCAAG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAGGTCTTGGCAACTTTaGATGGGAGAGTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSRSWQL*MGESLP
Trigger: AGGAAGGGACTCTCCCATCCAAAGTTGCCAAGACCT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGTTTCTGACTGGCTGTaGCTGACTGGTGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEVSDWL*LTGVRS
Trigger: AGACCTCACACCAGTCAGCCACAGCCAGTCAGAAAC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGCAGGATTGTTGGACTaGGCATCCATGGGAATCATG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSAGLLD*ASMGIM
Trigger: CATGATTCCCATGGATGCCCAGTCCAACAATCCTGC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACGACAGCAGGATTGTTaGACTGGGCATCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIARQQDC*TGHPWE
Trigger: TTCCCATGGATGCCCAGTCCAACAATCCTGCTGTCG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGTCGAACACAAGCTGTaGGGATGGTTCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSVEHKL*GWFCLV
Trigger: CACCAAGCAGAACCATCCCCACAGCTTGTGTTCGAC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAGCAAAGCTGCGGAGTaGGTGAGTTGGTCGAACACA +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSSKAAE*VSWSNT
Trigger: TGTGTTCGACCAACTCACCCACTCCGCAGCTTTGCT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCCTGTTCATACACATTaGCTGAATCCTCTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYPVHTH*LNPLLV
Trigger: AACCAACAGAGGATTCAGCCAATGTGTATGAACAGG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTCAGGTATCACCCAATaGGAATCAGAGAGAGTTATG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSGITQ*ESERVM
Trigger: CATAACTCTCTCTGATTCCCATTGGGTGATACCTGA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAGAAATGAGTTCTGGTaGCAGAGCGGCTGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIARNEFW*QSGWLA
Trigger: AGCCAACCAGCCGCTCTGCCACCAGAACTCATTTCT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTGGAAGGCAATCCTGTaGCCGGGCTGTGCATTAAAA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSWKAIL*PGCALK
Trigger: TTTTAATGCACAGCCCGGCCACAGGATTGCCTTCCA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGATTCCCAAGGCCAGATaGATGCCATCTTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQIPKAR*MPSFFH
Trigger: GTGGAAGAAAGATGGCATTCATCTGGCCTTGGGAAT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATGGTCCCTTTCTCCAGTCCTGTaGATAGGTACCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SLTRLIVTPVSASSGVWSLSPVL*IGTRGC
Trigger: ACAACCTCTGGTACCTATTCACAGGACTGGAGAAAG...GGACCATACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp ATTTTGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTTGGCCCCACTCCTTTTaGATTTCGTGCTTGAATTCG +
Preference number: 4 (lower is better)
Translates to: ILSGCSTFRVLKRIGSESWPHSF*ISCLNS
Trigger: CGAATTCAAGCACGAAATTCAAAAGGAGTGGGGCCA...ACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCATCTTTCTTCCACTTaGTCACTGGAACTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSHLSST*SLELLG
Trigger: ACCGAGGAGTTCCAGTGATCAAGTGGAAGAAAGATG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCATCTTTCTTCCACTTaGTCACTGGAACTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQHLSST*SLELLG
Trigger: ACCGAGGAGTTCCAGTGATCAAGTGGAAGAAAGATG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAACCTTCACTCACTGACTaGCTTCTTCCTGCTCCGAAA +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEPSLTD*LLPAPK
Trigger: TTTCGGAGCAGGAAGAAGTCAGTCAGTGAGTGAAGG...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATTAACTGAGTGGTCCTaGTGGGTGACCTGTACACTG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSLTEWS*WVTCTL
Trigger: CAGTGTACAGGTCACCCATCAGGACCACTCAGTTAA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCATTTGGTGCTATGGCATaGGAGATTCCCATGGGTGCT +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAFGAMA*EIPMGA
Trigger: AGCACCCATGGGAATCTCTCATGCCATAGCACCAAA...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGAGTCCTGGATACCATaGACTAGACTCAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEESWIP*TRLSRR
Trigger: CCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTTTCAGAATGTTGTCTaGAACATCACACTAGCACAG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYFQNVV*NITLAQ
Trigger: CTGTGCTAGTGTGATGTTTCAGACAACATTCTGAAA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTTCCCCCAAACAAGCTaGCAATTCACAAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCFPQTS*QFTKFR
Trigger: TCTGAACTTTGTGAATTGTCAGCTTGTTTGGGGGAA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAATGATGGAACTTCAGTaGAGGCTTTGCCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQMMELQ*RLCLDW
Trigger: CCAGTCCAGGCAAAGCCTTCACTGAAGTTCCATCAT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGACCCATTTGAAAGTTaGTGCTTCCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYDPFES*CFLSSI
Trigger: AATGGATGAAAGGAAGCAGCAACTTTCAAATGGGTC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCTCTTGTTGGTTCTTCTaGCAGTGGATTGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: FLSRKFTSSLSEPQPQPSSCWFF*QWIVGM
Trigger: CATGCCAACAATCCACTGGCAGAAGAACCAACAAGA...GCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTATCCGTAAGTTaGTTCCTCCCACTATCTGAA +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCQVSVS*FLPLSE
Trigger: TTCAGATAGTGGGAGGAAGCAACTTACGGATACTTG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATGGCATGTGCAGTCATaGTCCAAGTACTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEWHVQS*SKYWTF
Trigger: GAAGGTCCAGTACTTGGAGCATGACTGCACATGCCA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGACCTGAATGAGAGGTaGTTTTGCTTCCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQDLNER*FCFPVG
Trigger: CCCAACTGGGAAGCAAAAGCACCTCTCATTCAGGTC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAAGCAAAGGGGATCTTaGTTTTCCAGCCAACCCAAG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSKQRGS*FSSQPK
Trigger: CTTGGGTTGGCTGGAAAAGCAAGATCCCCTTTGCTT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCCAGAAATGTACTGCTaGTGGCAGAATGCCACTAGT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQPEMYC*WQNATS
Trigger: ACTAGTGGCATTCTGCCAGCAGCAGTACATTTCTGG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTGCTCTCAGGGAGTCTaGCATTTCTACGGGATTAGA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSCSQGV*HFYGIR
Trigger: TCTAATCCCGTAGAAATGGCAGACTCCCTGAGAGCA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAGTCAGAGGCTAGTTTaGAGTATTCACAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKESQRLV*SIHRFL
Trigger: AAGAAACCTGTGAATACTGCAAACTAGCCTCTGACT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATCTTGCAGAGTTTTaGTCTTGCTCTTCTACCAAC +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKENLAEF*SCSSTN
Trigger: GTTGGTAGAAGAGCAAGAGCAAAACTCTGCAAGATT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGTAAAGTCCCTCATCTaGCTTGTGGTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQVKSLI*LVVSGM
Trigger: CATTCCAGACACCACAAGCCAGATGAGGGACTTTAC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTCATCCAATTCACAGTaGGCACAGGCTTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSSSNSQ*AQAFQR
Trigger: TCTCTGGAAAGCCTGTGCCCACTGTGAATTGGATGA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAGCTGTGCACTGGTCTaGGCATTTCCAGCCTCATTT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWESCALV*AFPASF
Trigger: AAATGAGGCTGGAAATGCCCAGACCAGTGCACAGCT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCTCGAAAGGTGTACATaGCTTCTGGCTTCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQLERCT*LLASGF
Trigger: GAAACCTGAAGCCAGAAGCCATGTACACCTTTCGAG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGTTTTCTACTGGCCCTaGAACTTGCAACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQVFYWP*NLQLRL
Trigger: CAGCCTGAGTTGCAAGTTCCAGGGCCAGTAGAAAAC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGTTTTCTACTGGCCCTaGAACTTGCAACTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSVFYWP*NLQLRL
Trigger: CAGCCTGAGTTGCAAGTTCCAGGGCCAGTAGAAAAC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATCTGTAACCTTGGACTaGACCGTTTGCATAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQSVTLD*TVCIGR
Trigger: CCTGCCTATGCAAACGGTCCAGTCCAAGGTTACAGA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATCCAGTCATCAATTaGGATGTTCTTGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKENPVIN*DVLVQG
Trigger: ACCTTGGACAAGAACATCCCAATTGATGACTGGATT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAACTGGTGTGAGGTCTTaGCAACTTTGGATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIATGVRS*QLWMGE
Trigger: CTCTCCCATCCAAAGTTGCCAAGACCTCACACCAGT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGCAGGATTGTTGGACTaGGCATCCATGGGAATCATG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSAGLLD*ASMGIM
Trigger: CATGATTCCCATGGATGCCCAGTCCAACAATCCTGC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGTCCTCTGTTGGTTTGTaGCTCTCCTCAGACACTTCA +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQSSVGL*LSSDTS
Trigger: TGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGA...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCCTGTTCATACACATTaGCTGAATCCTCTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCPVHTH*LNPLLV
Trigger: AACCAACAGAGGATTCAGCCAATGTGTATGAACAGG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCTGTTTATGGGTAATTaGTATGCTGCAAAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVLFMGN*YAAKFP
Trigger: CGGGAACTTTGCAGCATACCAATTACCCATAAACAG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAGGTGTGCTGTTTATaGGTAATTGGTATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCQVCCL*VIGMLQ
Trigger: TTGCAGCATACCAATTACCCATAAACAGCACACCTG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATCATGAGAGATTCCCATaGGTGCTTTGTATGTTTAAG +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYHERFP*VLCMFK
Trigger: CTTAAACATACAAAGCACCCATGGGAATCTCTCATG...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTATCACAGTGTGGTATaGCACAAAAGCCACCCAAAT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCYHSVV*HKSHPN
Trigger: ATTTGGGTGGCTTTTGTGCCATACCACACTGTGATA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGAAGACAGGCGACATTaGCCAGTGCACCATATGACA +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQEDRRH*PVHHMT
Trigger: TGTCATATGGTGCACTGGCCAATGTCGCCTGTCTTC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGGGCCTAGAGAAGGTTaGGCTAGCCCAATGAATATT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQGPREG*ASPMNI
Trigger: AATATTCATTGGGCTAGCCCAACCTTCTCTAGGCCC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCTCTCCTTGTGTAGCTaGAACCAAAGCAGGAGATTG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSLSLCS*NQSRRL
Trigger: CAATCTCCTGCTTTGGTTCCAGCTACACAAGGAGAG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGGTCCCTCTGAGGTATaGAACACTGCAGCTTTAACA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSGPSEV*NTAALT
Trigger: TGTTAAAGCTGCAGTGTTCCATACCTCAGAGGGACC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAGCTGGAGATGCTGTTaGTTTTTCTTCCGAGAGCCG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSSWRCC*FFFREP
Trigger: CGGCTCTCGGAAGAAAAACCAACAGCATCTCCAGCT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGGCTGGATTTCGAGCTaGGCATCGGTAAATTCCAAT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQGWISS*ASVNSN
Trigger: ATTGGAATTTACCGATGCTCAGCTCGAAATCCAGCC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGCTGGATTTCGAGCTaGGCATCGGTAAATTCCAAT +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSGWISS*ASVNSN
Trigger: ATTGGAATTTACCGATGCTCAGCTCGAAATCCAGCC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TTTGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGTGGAGAAAAAGACCGTaGAAGTTTGAATGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: FVRVFHFQSPEEDRIREWWRKRP*KFECSL
Trigger: AAGGGAACATTCAAACTTTCACGGTCTTTTTCTCCA...CCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTAACTTTGATACTTCTTaGATTGACCACTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCNFDTS*IDHFQG
Trigger: TCCCTGGAAGTGGTCAATTCAAGAAGTATCAAAGTT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACTTTCTCCAGTCCTGTaGATAGGTACCAGAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQLSPVL*IGTRGC
Trigger: ACAACCTCTGGTACCTATTCACAGGACTGGAGAAAG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAATTGACTGTCATGGCTaGCACCTGGAAACTGTACTG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQIDCHG*HLETVL
Trigger: CAGTACAGTTTCCAGGTGTCAGCCATGACAGTCAAT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAATTGACTGTCATGGCTaGCACCTGGAAACTGTACTG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEIDCHG*HLETVL
Trigger: CAGTACAGTTTCCAGGTGTCAGCCATGACAGTCAAT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATCAAGGTTGAGATCCATGATTTGATGAGTAAGCCTATCACCACTGATTGTTTCGTGGTCCAGTACCATTaGCTGTCATGGCTGACACCT +
Preference number: 4 (lower is better)
Translates to: IKVEIHDLMSKPITTDCFVVQYH*LSWLTP
Trigger: AGGTGTCAGCCATGACAGTCAATGGTACTGGACCAC...GAAACAATCAGTGGTGATAGGCTTACTCATCAAATCATGGATCTCAACCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATGGCCCCACTCCTTTTaGATTTCGTGCTTGAATTCG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEWPHSF*ISCLNS
Trigger: CGAATTCAAGCACGAAATTCAAAAGGAGTGGGGCCA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCATGGCCCCACTCCTTTTaGATTTCGTGCTTGAATTCG +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAWPHSF*ISCLNS
Trigger: CGAATTCAAGCACGAAATTCAAAAGGAGTGGGGCCA...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACTCAGTGTCTTGACCTaGATGAGAGGTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSLSVLT*MRGAFA
Trigger: AGCAAAAGCACCTCTCATTCAGGTCAAGACACTGAG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAAAAGCCACCCAAATTaGAAACTGTCCTATTACAAG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEKSHPN*KLSYYK
Trigger: CTTGTAATAGGACAGTTTTCAATTTGGGTGGCTTTT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGAGCACTCTTGTTaGAGGAACAAATTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKENEHSC*RNKFAN
Trigger: ATTTGCGAATTTGTTCCTTCAACAAGAGTGCTCATT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTCAATCCCTAAAATCTaGGATTTGCAACCTATTCCA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSIPKI*DLQPIP
Trigger: TGGAATAGGTTGCAAATCTCAGATTTTAGGGATTGA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCTTCATTCTATAGATTaGAGGTGTGACTCAATCCCT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCLHSID*RCDSIP
Trigger: AGGGATTGAGTCACACCTTCAATCTATAGAATGAAG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTTGCATGAAGGGAACTaGGTGAAAGGGAAAGTAACC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSLHEGN*VKGKVT
Trigger: GGTTACTTTCCCTTTCACTCAGTTCCCTTCATGCAA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGCAAAGCCCTTTGAATaGGTAGCACTGATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSAKPFE*VALICK
Trigger: TTTGCAGATCAGTGCTACTCATTCAAAGGGCTTTGC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCATGTGCATTAAAAGGTTaGGGCTGGTTCCTTGTCGTC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIACALKG*GWFLVV
Trigger: GACGACAAGGAACCAGCCTCAACCTTTTAATGCACA...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR TCA 90 bp CAGCTGCATCGGCTGTTGCAACTCTCTAGCGAGTGTCATCCATCCATATACTTTTCCATCCATATACTTTaGGTTATAAACTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: QLHRLLQLSSECHPSIYFSIHIL*VINCHG
Trigger: GCCATGGCAGTTTATAACTCAAAGTATATGGATGGA...AAAGTATATGGATGGATGACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS-3UTR GCA 90 bp TTTGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGGACCCATTTGAAAGTTaGTGCTTCCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: FVRVFHFQSPEEDRIREWDPFES*CFLSSI
Trigger: AATGGATGAAAGGAAGCAGCAACTTTCAAATGGGTC...CCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGACCCATTTGAAAGTTaGTGCTTCCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCDPFES*CFLSSI
Trigger: AATGGATGAAAGGAAGCAGCAACTTTCAAATGGGTC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CAGCTGCATCGGCTGTTGCAACTCTCTAGCGAGTGTCATCCATCCATATACTTTGACCCATTTGAAAGTTaGTGCTTCCTTTCATCCATT +
Preference number: 4 (lower is better)
Translates to: QLHRLLQLSSECHPSIYFDPFES*CFLSSI
Trigger: AATGGATGAAAGGAAGCAGCAACTTTCAAATGGGTC...AAAGTATATGGATGGATGACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGAACCTCAGTGGTCCTaGTACTGCAACTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEEPQWS*YCNFCC
Trigger: ACAGCAAAAGTTGCAGTAGCAGGACCACTGAGGTTC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGAACCTCAGTGGTCCTaGTACTGCAACTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSEPQWS*YCNFCC
Trigger: ACAGCAAAAGTTGCAGTAGCAGGACCACTGAGGTTC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATAAATACAGCTGTCTATaGAGTCCTGGATCTGATAAA +
Preference number: 4 (lower is better)
Translates to: VCHFYGIRRQATLASAPYKYSCL*SPGSDK
Trigger: TTTATCAGATCCAGGACTGCATAGACAGCTGTATTT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAATACGTGGTGGCATGTaGAGTCATGCTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQIRGGM*SHAPST
Trigger: AGTACTTGGAGCATGACTGCACATGCCACCACGTAT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAATGAGAGGTGCTTTTaGTTCCCAGTTGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSNERCF*FPVGFL
Trigger: CAGAAACCCAACTGGGAAGCAAAAGCACCTCTCATT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAAGCAAAGGGGATCTTaGTTTTCCAGCCAACCCAAG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQKQRGS*FSSQPK
Trigger: CTTGGGTTGGCTGGAAAAGCAAGATCCCCTTTGCTT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGTCCACAGTTTAAGATaGTGCTTTGAAAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEVHSLR*CFEKYL
Trigger: CAGATACTTTTCAAAGCAGCATCTTAAACTGTGGAC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACTCGTGGGTGTCAAGTaGCTAAGGAGAATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSLVGVK*LRRMFH
Trigger: ATGGAACATTCTCCTTAGGCACTTGACACCCACGAG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTAGTCAGAGGCTAGTTTaGAGTATTCACAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCSQRLV*SIHRFL
Trigger: AAGAAACCTGTGAATACTGCAAACTAGCCTCTGACT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGTGCAACTGGAAGTCTaGCACGTGAACGTTATGCAA +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEVQLEV*HVNVMQ
Trigger: TTGCATAACGTTCACGTGGCAGACTTCCAGTTGCAC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAATCTTGCAGAGTTTTaGTCTTGCTCTTCTACCAAC +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVNLAEF*SCSSTN
Trigger: GTTGGTAGAAGAGCAAGAGCAAAACTCTGCAAGATT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCTGGCTTGTGGTGTCTaGAATGAAGTATGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVLACGV*NEVCFV
Trigger: TACAAAACATACTTCATTCCAGACACCACAAGCCAG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGTAAAGTCCCTCATCTaGCTTGTGGTGTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQVKSLI*LVVSGM
Trigger: CATTCCAGACACCACAAGCCAGATGAGGGACTTTAC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGGAGTCAGGTCTTGTTaGTTCTTCTGCCAGTGGATT +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAGVRSC*FFCQWI
Trigger: AATCCACTGGCAGAAGAACCAACAAGACCTGACTCC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGGCTACTACATTGGATaGTCTTTGCAGAAAATACAG +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVGYYIG*SLQKIQ
Trigger: CTGTATTTTCTGCAAAGACCATCCAATGTAGTAGCC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGGCTACTACATTGGATaGTCTTTGCAGAAAATACAG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCGYYIG*SLQKIQ
Trigger: CTGTATTTTCTGCAAAGACCATCCAATGTAGTAGCC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCAATGGCTACTACATTaGATGGTCTTTGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEQWLLH*MVFAEN
Trigger: ATTTTCTGCAAAGACCATCCAATGTAGTAGCCATTG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCATCTTTTCCTTCAATaGCTACTACATTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCHLFLQ*LLHWMV
Trigger: GACCATCCAATGTAGTAGCCATTGAAGGAAAAGATG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCCAGGTAAAACTTGGTaGAGGATAGCCAGAAACACA +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQPGKTW*RIARNT
Trigger: TGTGTTTCTGGCTATCCTCCACCAAGTTTTACCTGG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATTGCAGGTTTTCTACTaGCCCTGGAACTTGCAACTC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSLQVFY*PWNLQL
Trigger: GAGTTGCAAGTTCCAGGGCCAGTAGAAAACCTGCAA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGTACCAGAGGTTGTTTaGCTCCAGTGTTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSVPEVV*LQCFHL
Trigger: GAGATGGAAACACTGGAGCCAAACAACCTCTGGTAC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TTTGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGAATCCAGTCATCAATTaGGATGTTCTTGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: FVRVFHFQSPEEDRIREWNPVIN*DVLVQG
Trigger: ACCTTGGACAAGAACATCCCAATTGATGACTGGATT...CCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTTTAATTTGAAAACCTaGAACAAGAGAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEFNLKT*NKRAQG
Trigger: TCCCTGTGCTCTCTTGTTCCAGGTTTTCAAATTAAA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412726.5
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAGCATAGGTGGTTGTTaGGTAGTTGGTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIASIGGC*VVGPSL
Trigger: GAGTGAAGGACCAACTACCCAACAACCACCTATGCT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATGGCTGAGACAAAAGTaGTGTGTAAGGGACTTTCGG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSWLRQK*CVRDFR
Trigger: CCGAAAGTCCCTTACACACCACTTTTGTCTCAGCCA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATGGCTGAGACAAAAGTaGTGTGTAAGGGACTTTCGG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEWLRQK*CVRDFR
Trigger: CCGAAAGTCCCTTACACACCACTTTTGTCTCAGCCA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAATAGTGAGCTTGCACTaGTTTGCCATGGCATGGTAC +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEIVSLH*FAMAWY
Trigger: GTACCATGCCATGGCAAACCAGTGCAAGCTCACTAT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAATAGTGAGCTTGCACTaGTTTGCCATGGCATGGTAC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAIVSLH*FAMAWY
Trigger: GTACCATGCCATGGCAAACCAGTGCAAGCTCACTAT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAGGCTTTGCCTGGACTaGACATCTCTTCATACTCAG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQRLCLD*TSLHTQ
Trigger: CTGAGTATGAAGAGATGTCCAGTCCAGGCAAAGCCT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAGTGAAGGCTTTGCCTaGACTGGACATCTCTTCATA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSSEGFA*TGHLFI
Trigger: TATGAAGAGATGTCCAGTCCAGGCAAAGCCTTCACT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
3UTR CAA 72 bp ACTCCTAAGGAAGATGGCCTTAGTGAAGCTTTGAAATaGTATCACAGTGTGGTATGGCACAAAAGCCACCCA +
Preference number: 4 (lower is better)
Translates to: TPKEDGLSEALK*YHSVVWHKSHP
Trigger: TGGGTGGCTTTTGTGCCATACCACACTGTGATACAATTTCAAAGCTTCACTAAGGCCATCTTCCTTAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGATCTGATAAAATTCTaGCTTCTGCTTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCDLIKF*LLLHFL
Trigger: CAGGAAATGAAGCAGAAGTCAGAATTTTATCAGATC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATTTTGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTTACAGGTTGGAAGGATaGTTTAAAAACCATGGCGGA +
Preference number: 4 (lower is better)
Translates to: ILSGCSTFRVLKRIGSESYRLEG*FKNHGG
Trigger: TCCGCCATGGTTTTTAAATCATCCTTCCAACCTGTA...ACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp ATTTTGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTATAAAAGCCTTCATCTaGCTTCACCACCCCAAGTAT +
Preference number: 4 (lower is better)
Translates to: ILSGCSTFRVLKRIGSESIKAFI*LHHPKY
Trigger: ATACTTGGGGTGGTGAAGTCAGATGAAGGCTTTTAT...ACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp TTTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGAAGACCGTGAAAGTTTaGATGTTCCCTTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: FPLKKIYIFLIRAAASAKKTVKV*MFPFAS
Trigger: AGAAGCGAAAGGGAACATTCAAACTTTCACGGTCTT...CTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAAGACCGTGAAAGTTTaGATGTTCCCTTTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQKTVKV*MFPFAS
Trigger: AGAAGCGAAAGGGAACATTCAAACTTTCACGGTCTT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGATCTCCATTTCTTCATaGTGGATCCAAAGATCAGGG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQISISS*WIQRSG
Trigger: CCCTGATCTTTGGATCCATCATGAAGAAATGGAGAT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAATGCTTATTCCTTCTaGACTGCTTCAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQNAYSF*TASGSS
Trigger: GGAAGATCCTGAAGCAGTTCAGAAGGAATAAGCATT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAATGAGCACTCTTGTTaGAGGAACAAATTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVNEHSC*RNKFAN
Trigger: ATTTGCGAATTTGTTCCTTCAACAAGAGTGCTCATT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTCAATCCCTAAAATCTaGGATTTGCAACCTATTCCA +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVSIPKI*DLQPIP
Trigger: TGGAATAGGTTGCAAATCTCAGATTTTAGGGATTGA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTCCAGCTGCTATATCTaGGATACCATATTACATTTG +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCSSCYI*DTILHL
Trigger: CAAATGTAATATGGTATCTCAGATATAGCAGCTGGA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGATAGCAAGATACATTaGGGCATGGGTACATATATT +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCDSKIH*GMGTYI
Trigger: AATATATGTACCCATGCCTCAATGTATCTTGCTATC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTTCCCCCAAACAAGCTaGCAATTCACAAAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSFPQTS*QFTKFR
Trigger: TCTGAACTTTGTGAATTGTCAGCTTGTTTGGGGGAA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGCAAAGCCCTTTGAATaGGTAGCACTGATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQAKPFE*VALICK
Trigger: TTTGCAGATCAGTGCTACTCATTCAAAGGGCTTTGC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATCTTGTTGGTTCTTCTaGCAGTGGATTGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWESCWFF*QWIVGM
Trigger: CATGCCAACAATCCACTGGCAGAAGAACCAACAAGA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATCTTGTTGGTTCTTCTaGCAGTGGATTGTTGGCATG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQSCWFF*QWIVGM
Trigger: CATGCCAACAATCCACTGGCAGAAGAACCAACAAGA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TTTGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGAAATACAGCTGTCTATaGAGTCCTGGATCTGATAAA +
Preference number: 4 (lower is better)
Translates to: FVRVFHFQSPEEDRIREWKYSCL*SPGSDK
Trigger: TTTATCAGATCCAGGACTGCATAGACAGCTGTATTT...CCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTACATTGGATGGTCTTTaGAGAAAATACAGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCTLDGL*RKYSCL
Trigger: TAGACAGCTGTATTTTCTGCAAAGACCATCCAATGT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACAAGACTGTGAGCTCTaGAGAGGCACTAATATTCTC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQQDCEL*RGTNIL
Trigger: GAGAATATTAGTGCCTCTGCAGAGCTCACAGTCTTG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCAAACTCAATATCCATaGTTTCATAGGCATACAGGT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVQTQYP*FHRHTG
Trigger: ACCTGTATGCCTATGAAAGCATGGATATTGAGTTTG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACTGTGTTGTATTCAATaGTCGTTCCCTGTTGTCACC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQLCCIQ*SFPVVT
Trigger: GGTGACAACAGGGAACGAGCATTGAATACAACACAG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACTGTGGACACCTCAGTaGAGAACAATCTGTAACCTT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQLWTPQ*RTICNL
Trigger: AAGGTTACAGATTGTTCTGCACTGAGGTGTCCACAG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAATTCTCTGGAGTCTCTaGAGTATACCAGTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSILWSL*SIPVGR
Trigger: CCTTCCAACTGGTATACTGCAGAGACTCCAGAGAAT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAATTCTCTGGAGTCTCTaGAGTATACCAGTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQILWSL*SIPVGR
Trigger: CCTTCCAACTGGTATACTGCAGAGACTCCAGAGAAT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCATTCCTGCAGGGTCAGTaGCAGATGGCTTTTCAATAT +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAFLQGQ*QMAFQY
Trigger: ATATTGAAAAGCCATCTGGCACTGACCCTGCAGGAA...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGAGTCCTTCCAAACTTaGCATTTGTTCACTCAGATC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQESFQT*HLFTQI
Trigger: GATCTGAGTGAACAAATGGCAAGTTTGGAAGGACTC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGTGATGGCATTAAGCTaGTTCATGAGTCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQVMALS*FMSPSK
Trigger: TTTGGAAGGACTCATGAAGCAGCTTAATGCCATCAC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATTTCCAGAAATGTACTaGTGCTGGCAGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEFPEMY*CWQNAT
Trigger: AGTGGCATTCTGCCAGCAGCAGTACATTTCTGGAAA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGTCCACAGTTTAAGATaGTGCTTTGAAAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVVHSLR*CFEKYL
Trigger: CAGATACTTTTCAAAGCAGCATCTTAAACTGTGGAC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGGGCAGACCAGAGAATaGTCTGCCAAATATGATTTT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSGQTRE*SAKYDF
Trigger: AAAATCATATTTGGCAGAGCATTCTCTGGTCTGCCC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGTGTTTATTAAATCTTaGAGAGTTTTGCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEVFIKS*RVLLLL
Trigger: GAGCAAGAGCAAAACTCTGCAAGATTTAATAAACAC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATCACCACTGATTGTTTCCATAATCCAGTCATCAATTGGGATGTTCTTGTCCAATTCCTGTTCTTGAGCTaGCTGGATTTCGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ITTDCFHNPVINWDVLVQFLFLS*LDFELS
Trigger: GCTCAGCTCGAAATCCAGCCAGCTCAAGAACAGGAA...TTGGACAAGAACATCCCAATTGATGACTGGATTATGGAAACAATCAGTGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp TTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCGGCTACTACATTGGATaGTCTTTGCAGAAAATACAG +
Preference number: 4 (lower is better)
Translates to: FLSRKFTSSLSEPQPQPSGYYIG*SLQKIQ
Trigger: CTGTATTTTCTGCAAAGACCATCCAATGTAGTAGCC...GCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp CCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGCAATGGCTACTACATTaGATGGTCTTTGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: PLKKIYIFLIRAAASAKQQWLLH*MVFAEN
Trigger: ATTTTCTGCAAAGACCATCCAATGTAGTAGCCATTG...CTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATTTTTAGACCTGAGTTaGATGACTTCCTCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQFLDLS*MTSSPR
Trigger: ACGAGGCGAGGAAGTCATCCAACTCAGGTCTAAAAA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCATAGGCATACAGGTTaGAAGGATGATTTAAAAACC +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVHRHTG*KDDLKT
Trigger: GGTTTTTAAATCATCCTTCCAACCTGTATGCCTATG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CCACTGATTGTTTCCATAATCCAGTCATCAATTGGGATGTTCTTGTCCAAGGTATCATCCAATTCACAGTaGGCACAGGCTTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLIVSIIQSSIGMFLSKVSSNSQ*AQAFQR
Trigger: TCTCTGGAAAGCCTGTGCCCACTGTGAATTGGATGA...TACCTTGGACAAGAACATCCCAATTGATGACTGGATTATGGAAACAATCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp AGAACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTAGTACCAGAGGTTGTTTaGCTCCAGTGTTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: RTSLTRLIVTPVSASSGVVPEVV*LQCFHL
Trigger: GAGATGGAAACACTGGAGCCAAACAACCTCTGGTAC...TACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAATACCAGTTGGAAGGTaGTCCAGTACCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEIPVGR*SSTIDC
Trigger: ACAGTCAATGGTACTGGACCACCTTCCAACTGGTAT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAATACCAGTTGGAAGGTaGTCCAGTACCATTGACTGT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQIPVGR*SSTIDC
Trigger: ACAGTCAATGGTACTGGACCACCTTCCAACTGGTAT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCACATGAAGAGAGCTTaGTTGATCAGGAACTTGAGA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSHMKRA*LIRNLR
Trigger: TCTCAAGTTCCTGATCAACCAAGCTCTCTTCATGTG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAACCTCAGACGTCTTTTaGTTCTTAGGGACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQTSDVF*FLGTEL
Trigger: CAACTCTGTCCCTAAGAACCAAAAGACGTCTGAGGT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCTGTTTATGGGTAATTaGTATGCTGCAAAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQLFMGN*YAAKFP
Trigger: CGGGAACTTTGCAGCATACCAATTACCCATAAACAG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAATCCTTTGGTGCTATaGCATGAGAGATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQNPLVL*HERFPW
Trigger: CCATGGGAATCTCTCATGCCATAGCACCAAAGGATT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACCCTGTAGGCAGAGTTaGCATTCTTTAAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAPCRQS*HSLREG
Trigger: ACCTTCTCTTAAAGAATGCCAACTCTGCCTACAGGG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAGTTACCTGAAAACTTaGGCAGGCAATTATATACAT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKESYLKT*AGNYIH
Trigger: ATGTATATAATTGCCTGCCCAAGTTTTCAGGTAACT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAAGAGATCAGGAGACTaGGAAATTAATAAGTTACCT +
Preference number: 4 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEKRSGD*EINKLP
Trigger: AGGTAACTTATTAATTTCCCAGTCTCCTGATCTCTT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTCAGGTATCACCCAATaGGAATCAGAGAGAGTTATG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSSGITQ*ESERVM
Trigger: CATAACTCTCTCTGATTCCCATTGGGTGATACCTGA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAGAGGCAAGTATGACTaGTTTCTTATTGGCTATGAT +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVRGKYD*FLIGYD
Trigger: ATCATAGCCAATAAGAAACCAGTCATACTTGCCTCT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAGTGAAGGCTTTGCCTaGACTGGACATCTCTTCATA +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIASEGFA*TGHLFI
Trigger: TATGAAGAGATGTCCAGTCCAGGCAAAGCCTTCACT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATACAGGTTGGAAGGATaGTTTAAAAACCATGGCGGA +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQYRLEG*FKNHGG
Trigger: TCCGCCATGGTTTTTAAATCATCCTTCCAACCTGTA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCATACAGGTTGGAAGGATaGTTTAAAAACCATGGCGGA +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAYRLEG*FKNHGG
Trigger: TCCGCCATGGTTTTTAAATCATCCTTCCAACCTGTA...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAATAAAAGCCTTCATCTaGCTTCACCACCCCAAGTAT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEIKAFI*LHHPKY
Trigger: ATACTTGGGGTGGTGAAGTCAGATGAAGGCTTTTAT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAATAAAAGCCTTCATCTaGCTTCACCACCCCAAGTAT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQIKAFI*LHHPKY
Trigger: ATACTTGGGGTGGTGAAGTCAGATGAAGGCTTTTAT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAATCTCCATTTCTTCATaGTGGATCCAAAGATCAGGG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQISISS*WIQRSG
Trigger: CCCTGATCTTTGGATCCATCATGAAGAAATGGAGAT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATTCATACACATTGGCTaGATCCTCTGTTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEFIHIG*ILCWFV
Trigger: CACAAACCAACAGAGGATTCAGCCAATGTGTATGAA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATTCATACACATTGGCTaGATCCTCTGTTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQFIHIG*ILCWFV
Trigger: CACAAACCAACAGAGGATTCAGCCAATGTGTATGAA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATACATGTTAAAAGGCTaGGCCTGTGATGGCATTAAG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEYMLKG*ACDGIK
Trigger: CTTAATGCCATCACAGGCTCAGCCTTTTAACATGTA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCTCATAATCATCATTTaGCAATTCCTGATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQLIIII*QFLMPV
Trigger: CACAGGCATCAGGAATTGTCAAATGATGATTATGAG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCTCATAATCATCATTTaGCAATTCCTGATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSLIIII*QFLMPV
Trigger: CACAGGCATCAGGAATTGTCAAATGATGATTATGAG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGCCTTAGTGAAGCTTTaGAATTGTATCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQALVKL*NCITVW
Trigger: CCACACTGTGATACAATTTCAAAGCTTCACTAAGGC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGCCTTAGTGAAGCTTTaGAATTGTATCACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEALVKL*NCITVW
Trigger: CCACACTGTGATACAATTTCAAAGCTTCACTAAGGC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTCAAAGAGGCAAGTATaGCTGGTTTCTTATTGGCTA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSSKRQV*LVSYWL
Trigger: TAGCCAATAAGAAACCAGTCATACTTGCCTCTTTGA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAACCATTTGAAAGTTGCTaGTTCCTTTCATCCATTCCC +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEPFESC*FLSSIP
Trigger: GGGAATGGATGAAAGGAAGCAGCAACTTTCAAATGG...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACCATTTGAAAGTTGCTaGTTCCTTTCATCCATTCCC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSPFESC*FLSSIP
Trigger: GGGAATGGATGAAAGGAAGCAGCAACTTTCAAATGG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACAAGTATCCGTAAGTTaGTTCCTCCCACTATCTGAA +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSQVSVS*FLPLSE
Trigger: TTCAGATAGTGGGAGGAAGCAACTTACGGATACTTG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AGTAAGCCTATCACCACTGATTGTTTCCATAATCCAGTCATCAATTGGGATGTTATACGTGGTGGCATGTaGAGTCATGCTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: SKPITTDCFHNPVINWDVIRGGM*SHAPST
Trigger: AGTACTTGGAGCATGACTGCACATGCCACCACGTAT...AACATCCCAATTGATGACTGGATTATGGAAACAATCAGTGGTGATAGGCTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGAGTCCTTCCAAACTTaGCATTTGTTCACTCAGATC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQESFQT*HLFTQI
Trigger: GATCTGAGTGAACAAATGGCAAGTTTGGAAGGACTC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGTGATGGCATTAAGCTaGTTCATGAGTCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQVMALS*FMSPSK
Trigger: TTTGGAAGGACTCATGAAGCAGCTTAATGCCATCAC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTATCCTATCCCTTCCATaGTCTTTTAAAATTATGACC +
Preference number: 4 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVILSLP*SFKIMT
Trigger: GGTCATAATTTTAAAAGAGCATGGAAGGGATAGGAT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGGGCAGACCAGAGAATaGTCTGCCAAATATGATTTT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEGQTRE*SAKYDF
Trigger: AAAATCATATTTGGCAGAGCATTCTCTGGTCTGCCC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGCAGAGTTTTGCTCTTaGTCTTCTACCAACAACAAT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQAEFCS*SSTNNN
Trigger: ATTGTTGTTGGTAGAAGAGCAAGAGCAAAACTCTGC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATCAAGGTTGAGATCCATGATTTGATGAGTAAGCCTATCACCACTGATTGTTTCCTCGAAAGGTGTACATaGCTTCTGGCTTCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: IKVEIHDLMSKPITTDCFLERCT*LLASGF
Trigger: GAAACCTGAAGCCAGAAGCCATGTACACCTTTCGAG...GAAACAATCAGTGGTGATAGGCTTACTCATCAAATCATGGATCTCAACCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp ATCACCACTGATTGTTTCCATAATCCAGTCATCAATTGGGATGTTCTTGTCCAATTGCAGGTTTTCTACTaGCCCTGGAACTTGCAACTC +
Preference number: 4 (lower is better)
Translates to: ITTDCFHNPVINWDVLVQLQVFY*PWNLQL
Trigger: GAGTTGCAAGTTCCAGGGCCAGTAGAAAACCTGCAA...TTGGACAAGAACATCCCAATTGATGACTGGATTATGGAAACAATCAGTGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACACATGAAGAGAGCTTaGTTGATCAGGAACTTGAGA +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAHMKRA*LIRNLR
Trigger: TCTCAAGTTCCTGATCAACCAAGCTCTCTTCATGTG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp AGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGAACTTCAACTCTAACCTCTCAATaGAATAATATCGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RKFTSSLSEPQPQPSRTSTLTSQ*NNIAAC
Trigger: GCAAGCAGCGATATTATTCCATTGAGAGGTTAGAGT...TGAAGTTCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACAGGTGTGCTGTTTATaGGTAATTGGTATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQQVCCL*VIGMLQ
Trigger: TTGCAGCATACCAATTACCCATAAACAGCACACCTG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAATTGTATCACAGTGTaGTATGGCACAAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSNCITV*YGTKAT
Trigger: GGTGGCTTTTGTGCCATACCACACTGTGATACAATT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAATTGTATCACAGTGTaGTATGGCACAAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIANCITV*YGTKAT
Trigger: GGTGGCTTTTGTGCCATACCACACTGTGATACAATT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAAACTAGCTCCCTTTTaGCGATTCAGCTGCATAAAC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAKLAPF*RFSCIN
Trigger: GTTTATGCAGCTGAATCGCCAAAAGGGAGCTAGTTT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAAACTAGCTCCCTTTTaGCGATTCAGCTGCATAAAC +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEKLAPF*RFSCIN
Trigger: GTTTATGCAGCTGAATCGCCAAAAGGGAGCTAGTTT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGAAGTACCCAAAGGGTaGATAAGTATCAGCAATCAT +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQEVPKG*ISISNH
Trigger: ATGATTGCTGATACTTATCCACCCTTTGGGTACTTC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGATCTCCAGAAAGTTGTaGGCTCTGTATAGTATATGG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQISRKL*ALYSIW
Trigger: CCATATACTATACAGAGCCCACAACTTTCTGGAGAT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATTCCTTGTCGTCGGTTaGGTAAAGTTGAAGAGACAA +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSFLVVG*VKLKRQ
Trigger: TTGTCTCTTCAACTTTACCCAACCGACGACAAGGAA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442544.7
3UTR CAA 72 bp TTTACTTTTTGTGCTGTAAGGAAAACATCCAATCCTTaGGTGCTATGGCATGAGAGATTCCCATGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: FTFCAVRKTSNP*VLWHERFPWVL
Trigger: AAGCACCCATGGGAATCTCTCATGCCATAGCACCAAAGGATTGGATGTTTTCCTTACAGCACAAAAAGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGATCTGATAAAATTCTaGCTTCTGCTTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQDLIKF*LLLHFL
Trigger: CAGGAAATGAAGCAGAAGTCAGAATTTTATCAGATC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATGGAGAAAAAGACCGTaGAAGTTTGAATGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQWRKRP*KFECSL
Trigger: AAGGGAACATTCAAACTTTCACGGTCTTTTTCTCCA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAACTTTGATACTTCTTaGATTGACCACTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQNFDTS*IDHFQG
Trigger: TCCCTGGAAGTGGTCAATTCAAGAAGTATCAAAGTT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATCAAGGTTGAGATCCATGATTTGATGAGTAAGCCTATCACCACTGATTGTTTCCACAAAATGACAGATTaGGCCACCATACCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: IKVEIHDLMSKPITTDCFHKMTD*ATIPWS
Trigger: TGACCAAGGTATGGTGGCTCAATCTGTCATTTTGTG...GAAACAATCAGTGGTGATAGGCTTACTCATCAAATCATGGATCTCAACCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAGATGTTGTGTCTTCTaGCTTGTATTTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSRCCVF*LVFCTC
Trigger: GCAAGTGCAAAATACAAGTCAGAAGACACAACATCT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAGATGTTGTGTCTTCTaGCTTGTATTTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIARCCVF*LVFCTC
Trigger: GCAAGTGCAAAATACAAGTCAGAAGACACAACATCT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAAAAGCCACCCAAATTaGAAACTGTCCTATTACAAG +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQKSHPN*KLSYYK
Trigger: CTTGTAATAGGACAGTTTTCAATTTGGGTGGCTTTT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACTTCATTCTATAGATTaGAGGTGTGACTCAATCCCT +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIALHSID*RCDSIP
Trigger: AGGGATTGAGTCACACCTTCAATCTATAGAATGAAG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAAAGAGGATGTTGCCTaGCATTTAAGCACATTACAG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSKEDVA*HLSTLQ
Trigger: CTGTAATGTGCTTAAATGTCAGGCAACATCCTCTTT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAAAGAGGATGTTGCCTaGCATTTAAGCACATTACAG +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEKEDVA*HLSTLQ
Trigger: CTGTAATGTGCTTAAATGTCAGGCAACATCCTCTTT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCATCAAAGAGGCAAGTATaGCTGGTTTCTTATTGGCTA +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIASKRQV*LVSYWL
Trigger: TAGCCAATAAGAAACCAGTCATACTTGCCTCTTTGA...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATTTCAGAATGTTGTCTaGAACATCACACTAGCACAG +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQFQNVV*NITLAQ
Trigger: CTGTGCTAGTGTGATGTTTCAGACAACATTCTGAAA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTCCAGCTGCTATATCTaGGATACCATATTACATTTG +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSSSCYI*DTILHL
Trigger: CAAATGTAATATGGTATCTCAGATATAGCAGCTGGA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGATAGCAAGATACATTaGGGCATGGGTACATATATT +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSDSKIH*GMGTYI
Trigger: AATATATGTACCCATGCCTCAATGTATCTTGCTATC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAACAACAATCATAGGATaGCAATGTACAAAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQTTIIG*QCTKAL
Trigger: GAGAGCCTTTGTACATTGTCATCCTATGATTGTTGT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAAATACAGCTGTCTATaGAGTCCTGGATCTGATAAA +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSKYSCL*SPGSDK
Trigger: TTTATCAGATCCAGGACTGCATAGACAGCTGTATTT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGCTTTGAAAAGTATCTaGTGGATTTACATGTCGGAA +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQALKSI*WIYMSE
Trigger: TTCCGACATGTAAATCCAGCAGATACTTTTCAAAGC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGCAGAGTTTTGCTCTTaGTCTTCTACCAACAACAAT +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAAEFCS*SSTNNN
Trigger: ATTGTTGTTGGTAGAAGAGCAAGAGCAAAACTCTGC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACTGGCTTGTGGTGTCTaGAATGAAGTATGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIALACGV*NEVCFV
Trigger: TACAAAACATACTTCATTCCAGACACCACAAGCCAG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACATCTTTTCCTTCAATaGCTACTACATTGGATGGTC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQHLFLQ*LLHWMV
Trigger: GACCATCCAATGTAGTAGCCATTGAAGGAAAAGATG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp TTTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCATAGGCATACAGGTTaGAAGGATGATTTAAAAACC +
Preference number: 4 (lower is better)
Translates to: FPLKKIYIFLIRAAASAKHRHTG*KDDLKT
Trigger: GGTTTTTAAATCATCCTTCCAACCTGTATGCCTATG...CTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CCA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCATAGGCATACAGGTTaGAAGGATGATTTAAAAACC +
Preference number: 4 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSHRHTG*KDDLKT
Trigger: GGTTTTTAAATCATCCTTCCAACCTGTATGCCTATG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAACTCTAACCTCTCAATaGAATAATATCGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSTLTSQ*NNIAAC
Trigger: GCAAGCAGCGATATTATTCCATTGAGAGGTTAGAGT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAACTCTAACCTCTCAATaGAATAATATCGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIATLTSQ*NNIAAC
Trigger: GCAAGCAGCGATATTATTCCATTGAGAGGTTAGAGT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAATCCAGTCATCAATTaGGATGTTCTTGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIANPVIN*DVLVQG
Trigger: ACCTTGGACAAGAACATCCCAATTGATGACTGGATT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAGGATAATAATCAACTaGGTCAGTGGGATCGGTTAT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWERIIIN*VSGIGY
Trigger: ATAACCGATCCCACTGACCCAGTTGATTATTATCCT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACAAATTAGTATCAACTaGCCAATAACCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQQISIN*PITSIS
Trigger: GGAGATGGAGGTTATTGGCCAGTTGATACTAATTTG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAACAAATTAGTATCAACTaGCCAATAACCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEQISIN*PITSIS
Trigger: GGAGATGGAGGTTATTGGCCAGTTGATACTAATTTG...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGAAGTACCCAAAGGGTaGATAAGTATCAGCAATCAT +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEEVPKG*ISISNH
Trigger: ATGATTGCTGATACTTATCCACCCTTTGGGTACTTC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAATCTCCAGAAAGTTGTaGGCTCTGTATAGTATATGG +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAISRKL*ALYSIW
Trigger: CCATATACTATACAGAGCCCACAACTTTCTGGAGAT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAACTTGCCAAAATAGGTaGATTTTTAGCCACTCACTA +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIATCQNR*IFSHSL
Trigger: TAGTGAGTGGCTAAAAATTCACCTATTTTGGCAAGT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAACTTGCCAAAATAGGTaGATTTTTAGCCACTCACTA +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQTCQNR*IFSHSL
Trigger: TAGTGAGTGGCTAAAAATTCACCTATTTTGGCAAGT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAACGAAGAGTCCAGATaGGTAGTAATATTCATTTGC +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWENEESR*VVIFIC
Trigger: GCAAATGAATATTACTACTCATCTGGACTCTTCGTT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATTCCTTTCTTGCATCTaGAAATACATGTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSFLSCI*KYMFST
Trigger: TGTGCTGAACATGTATTTTCAGATGCAAGAAAGGAA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATTCCTTTCTTGCATCTaGAAATACATGTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEFLSCI*KYMFST
Trigger: TGTGCTGAACATGTATTTTCAGATGCAAGAAAGGAA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACAAACTCAATATCCATaGTTTCATAGGCATACAGGT +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSQTQYP*FHRHTG
Trigger: ACCTGTATGCCTATGAAAGCATGGATATTGAGTTTG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGCTTTGAAAAGTATCTaGTGGATTTACATGTCGGAA +
Preference number: 4 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEALKSI*WIYMSE
Trigger: TTCCGACATGTAAATCCAGCAGATACTTTTCAAAGC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACACAGTTTAAGATGCTaGTTTGAAAAGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAHSLRC*FEKYLL
Trigger: CAGCAGATACTTTTCAAAGCAGCATCTTAAACTGTG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACACAGTTTAAGATGCTaGTTTGAAAAGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSHSLRC*FEKYLL
Trigger: CAGCAGATACTTTTCAAAGCAGCATCTTAAACTGTG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGTGTTTATTAAATCTTaGAGAGTTTTGCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQVFIKS*RVLLLL
Trigger: GAGCAAGAGCAAAACTCTGCAAGATTTAATAAACAC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACAATGGCTACTACATTaGATGGTCTTTGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQQWLLH*MVFAEN
Trigger: ATTTTCTGCAAAGACCATCCAATGTAGTAGCCATTG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGAACAAATTCGCAAATaGACCGGACTTTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAEQIRK*TGLSNE
Trigger: TTCATTAGAAAGTCCGGTCCATTTGCGAATTTGTTC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGAACAAATTCGCAAATaGACCGGACTTTCTAATGAA +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSEQIRK*TGLSNE
Trigger: TTCATTAGAAAGTCCGGTCCATTTGCGAATTTGTTC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAGAGGCAAGTATGACTaGTTTCTTATTGGCTATGAT +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIARGKYD*FLIGYD
Trigger: ATCATAGCCAATAAGAAACCAGTCATACTTGCCTCT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR TCA 90 bp AACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATGGATCTGATAAAATTCTaGCTTCTGCTTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: NFINKINRHASVCFIRCMDLIKF*LLLHFL
Trigger: CAGGAAATGAAGCAGAAGTCAGAATTTTATCAGATC...CATACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR TCA 90 bp AGTAAGCCTATCACCACTGATTGTTTCCATAATCCAGTCATCAATTGGGATGTTAACTTTGATACTTCTTaGATTGACCACTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SKPITTDCFHNPVINWDVNFDTS*IDHFQG
Trigger: TCCCTGGAAGTGGTCAATTCAAGAAGTATCAAAGTT...AACATCCCAATTGATGACTGGATTATGGAAACAATCAGTGGTGATAGGCTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR GCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAAAGTAACCCTGCTCTaGATCTATTTTAAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSKVTLL*IYFKVQ
Trigger: CTGAACTTTAAAATAGATGCAGAGCAGGGTTACTTT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR GCA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAAAGTAACCCTGCTCTaGATCTATTTTAAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAKVTLL*IYFKVQ
Trigger: CTGAACTTTAAAATAGATGCAGAGCAGGGTTACTTT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CCA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAAGAGATCAGGAGACTaGGAAATTAATAAGTTACCT +
Preference number: 4 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSKRSGD*EINKLP
Trigger: AGGTAACTTATTAATTTCCCAGTCTCCTGATCTCTT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS GCA 90 bp ACCTTCGGGGCCAGGGGTCGCGGGCAGCGGCAGCACTCACACACATaGACTCACACACGCATGCACACATGCACACACACGCGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: TFGARGRGQRQHSHT*THTRMHTCTHTRRA
Trigger: GGCTCGGCGCGTGTGTGTGCATGTGTGCATGCGTGTGTGAGTGCATGTGTGTGAGTGCTGCCGCTGCCCGCGACCCCTGGCCCCGAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS GCA 90 bp CGGTCCACTGAGAGTGTTGGGAATGGCACAGGCCGGAGAGTGAACTaGGGGTGGGGATATCCACAGGTGGGAGACGGGAGGATTCCTGGG +
Preference number: 5 (lower is better)
Translates to: RSTESVGNGTGRRVN*GWGYPQVGDGRIPG
Trigger: CCCAGGAATCCTCCCGTCTCCCACCTGTGGATATCCCCACCCGCAGTTCACTCTCCGGCCTGTGCCATTCCCAACACTCTCAGTGGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp GGGTGGGGATATCCACAGGTGGGAGACGGGAGGATTCCTGGGTACTaGGCACTTTCTAGCGTTGGCACCGGGATGGCGCTCACGACAGCA +
Preference number: 5 (lower is better)
Translates to: GWGYPQVGDGRIPGY*ALSSVGTGMALTTA
Trigger: TGCTGTCGTGAGCGCCATCCCGGTGCCAACGCTAGAAAGTGCCCAGTACCCAGGAATCCTCCCGTCTCCCACCTGTGGATATCCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 90 bp AACCTCGGTCCACTGAGAGTGTTGGGAATGGCACAGGCCGGAGAGTaGACTGCGGGTGGGGATATCCACAGGTGGGAGACGGGAGGATTC +
Preference number: 5 (lower is better)
Translates to: NLGPLRVLGMAQAGE*TAGGDIHRWETGGF
Trigger: GAATCCTCCCGTCTCCCACCTGTGGATATCCCCACCCGCAGTTCACTCTCCGGCCTGTGCCATTCCCAACACTCTCAGTGGACCGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp GACCCTCACAGCATCATGGGTAAGAGCCACAGCCTGTACACCTACTaGTGGGAGCATGGGGGTGGAGAGATCTGGGACCGAGGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: DPHSIMGKSHSLYTY*WEHGGGEIWDRGGE
Trigger: TTCCCCACCTCGGTCCCAGATCTCTCCACCCCCATGCTCCCACCAGTAGGTGTACAGGCTGTGGCTCTTACCCATGATGCTGTGAGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CCA 90 bp ACTGAGAGTGTTGGGAATGGCACAGGCCGGAGAGTGAACTGCGGGTaGGGATATCCACAGGTGGGAGACGGGAGGATTCCTGGGTACTGG +
Preference number: 5 (lower is better)
Translates to: TESVGNGTGRRVNCG*GYPQVGDGRIPGYW
Trigger: CCAGTACCCAGGAATCCTCCCGTCTCCCACCTGTGGATATCCCCACCCGCAGTTCACTCTCCGGCCTGTGCCATTCCCAACACTCTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp CCTCACAGCATCATGGGTAAGAGCCACAGCCTGTACACCTACTGGTaGGAGCATGGGGGTGGAGAGATCTGGGACCGAGGTGGGGAAATC +
Preference number: 5 (lower is better)
Translates to: PHSIMGKSHSLYTYW*EHGGGEIWDRGGEI
Trigger: GATTTCCCCACCTCGGTCCCAGATCTCTCCACCCCCATGCTCCCACCAGTAGGTGTACAGGCTGTGGCTCTTACCCATGATGCTGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CCA 90 bp GAGTGGGTGAGTTGGTCGAACACAAGCTGTGGGGATGGTTCTGCTTaGTGCCTCCTCGCTGCTAGAATGCTCAGGCTGAGATGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: EWVSWSNTSCGDGSA*CLLAARMLRLRWGQ
Trigger: CTGCCCCCATCTCAGCCTGAGCATTCTAGCAGCGAGGAGGCACCAAGCAGAACCATCCCCACAGCTTGTGTTCGACCAACTCACCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000579702.1
ENST00000581580.5
CDS-3UTR CAA 90 bp AGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTTCCAATGTCCCCCGGTaGGAGTCGGCTGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: SRLICNAPEGKTTTRESPSNVPR*ESADLQ
Trigger: TTGCAGATCAGCCGACTCCAACCGGGGGACATTGGA...AGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS GCA 90 bp TGGGTGAGTTGGTCGAACACAAGCTGTGGGGATGGTTCTGCTTGGTaGCTCCTCGCTGCTAGAATGCTCAGGCTGAGATGGGGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: WVSWSNTSCGDGSAW*LLAARMLRLRWGQH
Trigger: ATGCTGCCCCCATCTCAGCCTGAGCATTCTAGCAGCGAGGAGGCACCAAGCAGAACCATCCCCACAGCTTGTGTTCGACCAACTCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000579702.1
ENST00000581580.5
CDS CCA 90 bp CCCAGTTGGGTTTCTGACTGGCTGTGGCTGACTGGTGTGAGGTCTTaGCAACTTTGGATGGGAGAGTCCCTTCCTGCAGGGTCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: PSWVSDWLWLTGVRS*QLWMGESLPAGSVP
Trigger: TGGCACTGACCCTGCAGGAAGGGACTCTCCCATCCAAAGTTGCCAAGACCTCACACCAGTCAGCCACAGCCAGTCAGAAACCCAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp CCTCACAGCATCATGGGTAAGAGCCACAGCCTGTACACCTACTGGTaGGAGCATGGGGGTGGAGAGATCGGTTATAGACCTGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: PHSIMGKSHSLYTYW*EHGGGEIGYRPGGG
Trigger: GCCACCACCAGGTCTATAACCGATCTCTCCACCCCCATGCTCCCACCAGTAGGTGTACAGGCTGTGGCTCTTACCCATGATGCTGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS-3UTR CAA 90 bp GATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGTCTTCTGCCAGTGGATaGTTGGCATGGGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: DLQCSRGQDHHSGVTWDWSSASG*LAWAPQ
Trigger: TTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGA...CCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp GATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGTGGCCTGCCGCCATCTaGGGAGCTCTAAGAACAAAG +
Preference number: 5 (lower is better)
Translates to: DLQCSRGQDHHSGVTWDWWPAAI*GALRTK
Trigger: CTTTGTTCTTAGAGCTCCCAAGATGGCGGCAGGCCA...CCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR CAA 90 bp TGGCCCAAGTTTCCATTCCTTGGAATCCATGAGGCCAAGAACCCCAGGTCAGAGAGGCTTGCTGCCATCTaGGGAGTGGCCTGCCGCCAT +
Preference number: 5 (lower is better)
Translates to: WPKFPFLGIHEAKNPRSERLAAI*GVACRH
Trigger: ATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCCT...CTCTGACCTGGGGTTCTTGGCCTCATGGATTCCAAGGAATGGAAACTTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR CAA 90 bp GTGAGTTTGGGGCCTGGGGACAGCTGCATCGGCTGTTGCAACTCTCTAGCGAGTCAGCTGCATCGGCTGTaGCAACTCTCTAGCGAGTGT +
Preference number: 5 (lower is better)
Translates to: VSLGPGDSCIGCCNSLASQLHRL*QLSSEC
Trigger: ACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTG...ACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCCAGGCCCCAAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS TCA 90 bp GGGATGGTTCTGCTTGGTGCCTCCTCGCTGCTAGAATGCTCAGGCTaGGATGGGGGCAGCATAGGTGGTTGTTGGGTAGTTGGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: GMVLLGASSLLECSG*DGGSIGGCWVVGPS
Trigger: TGAAGGACCAACTACCCAACAACCACCTATGCTGCCCCCATCTCAGCCTGAGCATTCTAGCAGCGAGGAGGCACCAAGCAGAACCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp TTCTTAGGGACAGAGTTGTCTGCCCAGCTGACCCTCACAGCATCATaGGTAAGAGCCACAGCCTGTACACCTACTGGTGGGAGCATGGGG +
Preference number: 5 (lower is better)
Translates to: FLGTELSAQLTLTAS*VRATACTPTGGSMG
Trigger: CCCCATGCTCCCACCAGTAGGTGTACAGGCTGTGGCTCTTACCCATGATGCTGTGAGGGTCAGCTGGGCAGACAACTCTGTCCCTAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp GGTTCTGCTTGGTGCCTCCTCGCTGCTAGAATGCTCAGGCTGAGATaGGGGCAGCATAGGTGGTTGTTGGGTAGTTGGTCCTTCACTCAC +
Preference number: 5 (lower is better)
Translates to: GSAWCLLAARMLRLR*GQHRWLLGSWSFTH
Trigger: GTGAGTGAAGGACCAACTACCCAACAACCACCTATGCTGCCCCCATCTCAGCCTGAGCATTCTAGCAGCGAGGAGGCACCAAGCAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp GACCCTCACAGCATCATGGGTAAGAGCCACAGCCTGTACACCTACTaGTGGGAGCATGGGGGTGGAGAGATCGGTTATAGACCTGGTGGT +
Preference number: 5 (lower is better)
Translates to: DPHSIMGKSHSLYTY*WEHGGGEIGYRPGG
Trigger: ACCACCAGGTCTATAACCGATCTCTCCACCCCCATGCTCCCACCAGTAGGTGTACAGGCTGTGGCTCTTACCCATGATGCTGTGAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS-3UTR CAA 90 bp GCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTCCAATGACTTCACACTaGAGTAGCACTGTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: APEGKTTTRESPGIGVRSPMTSH*SSTVSP
Trigger: GGGAGACACAGTGCTACTCAAGTGTGAAGTCATTGG...AGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp AGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGGGAGTCACCTGGGATaGGAGTCAGGTCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: RGQDHHSGVTWDWSQVLLGSHLG*ESGLVG
Trigger: ACCAACAAGACCTGACTCCAATCCCAGGTGACTCCC...CAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS GCA 90 bp CTTCATGATGGATCCAAAGATCAGGGGGTCGGAGGTCCTTCTGGCTaGCCTTCCTTTTGCCAGCACTGTGGGTGGCCCGTTTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LHDGSKDQGVGGPSG*PSFCQHCGWPVSFS
Trigger: AGAGAAAGAAACGGGCCACCCACAGTGCTGGCAAAAGGAAGGGCAGCCAGAAGGACCTCCGACCCCCTGATCTTTGGATCCATCATGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp TGTCGTCGGTTGGGTAAAGTTGAAGAGACAATTCCGCGCGAGAGCTaGAGATGCTGTTGGTTTTTCTTCCGAGAGCCGAGGGGACCCAGG +
Preference number: 5 (lower is better)
Translates to: CRRLGKVEETIPRES*RCCWFFFREPRGPR
Trigger: CCTGGGTCCCCTCGGCTCTCGGAAGAAAAACCAACAGCATCTCCAGCTCTCGCGCGGAATTGTCTCTTCAACTTTACCCAACCGACGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTTGGAGTCAGGTCTTGTaGGTTCTTCTGCCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: MLQRARPPLGSHLGLESGWSQVL*VLLPVD
Trigger: ATCCACTGGCAGAAGAACCAACAAGACCTGACTCCA...ACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp TCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCCTCGCACCACGATGTTaGGGTTCAAGGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SGCSTFRVLKRIGSESGPLAPRC*GSREES
Trigger: GGACTCCTCCCTTGAACCCAAACATCGTGGTGCGAG...GGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp GCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTCCAAGTTTCCATTCCTaGGAATCCATGAGGCCAAGA +
Preference number: 5 (lower is better)
Translates to: APEGKTTTRESPGIGVRSPSFHS*ESMRPR
Trigger: TCTTGGCCTCATGGATTCCAAGGAATGGAAACTTGG...AGACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS TCA 90 bp CTCATTGGTGGAGGTAGCAAAGGATTAGCAAAGCTGCGGAGTGGGTaGGTTGGTCGAACACAAGCTGTGGGGATGGTTCTGCTTGGTGCC +
Preference number: 5 (lower is better)
Translates to: LIGGGSKGLAKLRSG*VGRTQAVGMVLLGA
Trigger: GGCACCAAGCAGAACCATCCCCACAGCTTGTGTTCGACCAACTCACCCACTCCGCAGCTTTGCTAATCCTTTGCTACCTCCACCAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000579702.1
ENST00000581580.5
CDS GCA 90 bp AAGTCGCACCTCAGACGTCTTTTGGTTCTTAGGGACAGAGTTGTCTaGCCAGCTGACCCTCACAGCATCATGGGTAAGAGCCACAGCCTG +
Preference number: 5 (lower is better)
Translates to: KSHLRRLLVLRDRVV*PADPHSIMGKSHSL
Trigger: CAGGCTGTGGCTCTTACCCATGATGCTGTGAGGGTCAGCTGGGCAGACAACTCTGTCCCTAAGAACCAAAAGACGTCTGAGGTGCGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS GCA 90 bp AGGAGGGACCAAGAGGAGATGGAAGGCAATCCTGTGGCCGGGCTGTaGATTAAAAGGTTGAGGCTGGTTCCTTGTCGTCGGTTGGGTAAA +
Preference number: 5 (lower is better)
Translates to: RRDQEEMEGNPVAGL*IKRLRLVPCRRLGK
Trigger: TTTACCCAACCGACGACAAGGAACCAGCCTCAACCTTTTAATGCACAGCCCGGCCACAGGATTGCCTTCCATCTCCTCTTGGTCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS CCA 90 bp CATTCCCAAGGCCAGATGAATGCCATCTTTCTTCCACTTGATCACTaGAACTCCTCGGTCGGACTCCGCGGAGCAGTCGAGGAGGACATT +
Preference number: 5 (lower is better)
Translates to: HSQGQMNAIFLPLDH*NSSVGLRGAVEEDI
Trigger: AATGTCCTCCTCGACTGCTCCGCGGAGTCCGACCGAGGAGTTCCAGTGATCAAGTGGAAGAAAGATGGCATTCATCTGGCCTTGGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000578080.1
CDS CCA 90 bp AGGCCAAGAACCCCAGGTCAGAGAATAAAAGGCTTGCTGCCATCTTaGGAGTGGCCTGCCGCCATCTTGGGAGCTCTAAGAACAAAGACC +
Preference number: 5 (lower is better)
Translates to: RPRTPGQRIKGLLPS*EWPAAILGALRTKT
Trigger: GGTCTTTGTTCTTAGAGCTCCCAAGATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCCTTTTATTCTCTGACCTGGGGTTCTTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR CAA 90 bp CTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTCCAATGACTTCACACTaGAGTAGCACTGTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: LICNAPEGKTTTRESPGIPMTSH*SSTVSP
Trigger: GGGAGACACAGTGCTACTCAAGTGTGAAGTCATTGG...AATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp GGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGCATGGGCTCTTCTGCCAGTGGATaGTTGGCATGGGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: GIGVRSCWFFCQWIVGMGSSASG*LAWAPQ
Trigger: TTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGA...GCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp TGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCAATGTCCCCCGGTaGGAGTCGGCTGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: CQLTMTARGFPSLVMTVKSNVPR*ESADLQ
Trigger: TTGCAGATCAGCCGACTCCAACCGGGGGACATTGGA...CTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp TCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGCTCCAATGTCCCCCGGTaGGAGTCGGCTGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: SPGIGVRSCWFFCQWIVGSNVPR*ESADLQ
Trigger: TTGCAGATCAGCCGACTCCAACCGGGGGACATTGGA...GCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp GCTTCATACGTGGTGGCATGTGCAGTCATGCTCCAAGTACTGGACCTTCTGTTTGGCCACCTTGATGGGTaGAGAACTCTCTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: ASYVVACAVMLQVLDLLFGHLDG*RTLSRS
Trigger: GGACCGGGAGAGAGTTCTCAACCCATCAAGGTGGCC...AAACAGAAGGTCCAGTACTTGGAGCATGACTGCACATGCCACCACGTATGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGGCCACCTTGATGGGTaGAGAACTCTCTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEGHLDG*RTLSRS
Trigger: GGACCGGGAGAGAGTTCTCAACCCATCAAGGTGGCC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATTCCAATGTCCCCCGGTTGGAGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGCAGAGAATAAAAGGCTaGCTGCCATCTTGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: IPMSPGWSRLICNAPEGKQRIKG*LPSWEW
Trigger: CCACTCCCAAGATGGCAGCAAGCCTTTTATTCTCTG...CTTGCCCTCTGGAGCATTGCAGATCAGCCGACTCCAACCGGGGGACATTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS-3UTR CAA 90 bp GAGTTTGGGGCCTGGGGACAGCTGCATCGGCTGTTGCAACTCTCTAGCGAGTGTACTGCCATGGCTATGTaGTCCAAACTTTCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: EFGAWGQLHRLLQLSSECTAMAM*SKLSQP
Trigger: AGGCTGAGAAAGTTTGGACAACATAGCCATGGCAGT...ACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCCAGGCCCCAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS TCA 90 bp CGTTCCCTGTTGTCACCTTCTCTGGAGAAAAAGACCGTGAAAGTTTaGATGTTCCCTTTCGCTTCTGCAGGTGGGCGCCAGCTGAGACGG +
Preference number: 5 (lower is better)
Translates to: RSLLSPSLEKKTVKV*MFPFASAGGRQLRR
Trigger: CCGTCTCAGCTGGCGCCCACCTGCAGAAGCGAAAGGGAACATTCAAACTTTCACGGTCTTTTTCTCCAGAGAAGGTGACAACAGGGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 90 bp TTTCTACTGGCCCTGGAACTTGCAACTCAGGCTGTGTGGCCACCTTaGTGGGTTGAGAACTCTCTCCCGGTCCCCATTCATTGTAAGCCA +
Preference number: 5 (lower is better)
Translates to: FLLALELATQAVWPP*WVENSLPVPIHCKP
Trigger: TGGCTTACAATGAATGGGGACCGGGAGAGAGTTCTCAACCCATCAAGGTGGCCACACAGCCTGAGTTGCAAGTTCCAGGGCCAGTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 90 bp TTTCATCCATTCCCAAGGCCAGATGAATGCCATCTTTCTTCCACTTaGTCACTGGAACTCCTCGGTCGGACTCCGCGGAGCAGTCGAGGA +
Preference number: 5 (lower is better)
Translates to: FHPFPRPDECHLSST*SLELLGRTPRSSRG
Trigger: TCCTCGACTGCTCCGCGGAGTCCGACCGAGGAGTTCCAGTGATCAAGTGGAAGAAAGATGGCATTCATCTGGCCTTGGGAATGGATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000578080.1
CDS GCA 90 bp CCCAGGTCAGAGAATAAAAGGCTTGCTGCCATCTTGGGAGTGGCCTaGCGCCATCTTGGGAGCTCTAAGAACAAAGACCTGCTACTGCAA +
Preference number: 5 (lower is better)
Translates to: PRSENKRLAAILGVA*RHLGSSKNKDLLLQ
Trigger: TTGCAGTAGCAGGTCTTTGTTCTTAGAGCTCCCAAGATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCCTTTTATTCTCTGACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS CCA 90 bp CACCTACTGGTGGGAGCATGGGGGTGGAGAGATCTGGGACCGAGGTaGGGAAATCATCAAGCAAAGGATAATAATCAACTGGGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: HLLVGAWGWRDLGPR*GNHQAKDNNQLGQW
Trigger: CCACTGACCCAGTTGATTATTATCCTTTGCTTGATGATTTCCCCACCTCGGTCCCAGATCTCTCCACCCCCATGCTCCCACCAGTAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CCA 90 bp AGAACCCCAGGTCAGAGAATAAAAGGCTTGCTGCCATCTTGGGAGTaGCCTGCCGCCATCTTGGGAGCTCTAAGAACAAAGACCTGCTAC +
Preference number: 5 (lower is better)
Translates to: RTPGQRIKGLLPSWE*PAAILGALRTKTCY
Trigger: GTAGCAGGTCTTTGTTCTTAGAGCTCCCAAGATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCCTTTTATTCTCTGACCTGGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS CCA 90 bp TTCACCCACTCCATCTCCACATTGGCTGAATCCTCTGTTGGTTTGTaGCTCTCCTCAGACACTTCAGGGGCTGTTGGCACAGACACAGGA +
Preference number: 5 (lower is better)
Translates to: FTHSISTLAESSVGL*LSSDTSGAVGTDTG
Trigger: TCCTGTGTCTGTGCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTGGAGATGGAGTGGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS-3UTR CAA 90 bp ATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGGATTGGAGTCAGGTTCAGCAGAGACCCATTaGAAAGTTGCTGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: MLQRARPPLGSHLGLESGSAETH*KVAASF
Trigger: AAAGGAAGCAGCAACTTTCAAATGGGTCTCTGCTGA...ACCTGACTCCAATCCCAGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp AGAGGTGGGGGCTGCTTCATACGTGGTGGCATGTGCAGTCATGCTCCAAGTACTGATTGGAGTCAGGTCTaGTTGGTTCTTCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: RGGGCFIRGGMCSHAPSTDWSQV*LVLLPV
Trigger: CACTGGCAGAAGAACCAACAAGACCTGACTCCAATC...AGTACTTGGAGCATGACTGCACATGCCACCACGTATGAAGCAGCCCCCACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CCACTCGGGAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGATTGGAGTCAGGTCTaGTTGGTTCTTCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: PLGSHLGLESGLVGSSASDWSQV*LVLLPV
Trigger: CACTGGCAGAAGAACCAACAAGACCTGACTCCAATC...ACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTCCCGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp TCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGCGGGAGTCACCTGGGATaGGAGTCAGGTCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: SPGIGVRSCWFFCQWIVGGSHLG*ESGLVG
Trigger: ACCAACAAGACCTGACTCCAATCCCAGGTGACTCCC...GCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTCCAATGTCCCCCGGTaGGAGTCGGCTGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKESNVPR*ESADLQ
Trigger: TTGCAGATCAGCCGACTCCAACCGGGGGACATTGGA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TTTGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCTTGGACTGGACCGTTaGCATAGGCAGGGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: FVRVFHFQSPEEDRIREWLGLDR*HRQGVP
Trigger: GGGAACCCCCTGCCTATGCAAACGGTCCAGTCCAAG...CCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp AATGACTGTCAAGTCCTTGGGAGCAGAGGTGGGGGCTGCTTCATACGTGGTGGCAATAGGTACCAGAGGTaGTTTGGCTCCAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: NDCQVLGSRGGGCFIRGGNRYQR*FGSSVS
Trigger: GGAAACACTGGAGCCAAACAACCTCTGGTACCTATT...GCCACCACGTATGAAGCAGCCCCCACCTCTGCTCCCAAGGACTTGACAGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp GGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCTCTGCAGTATACCAGTaGGAAGGTGGTCCAGTACCA +
Preference number: 5 (lower is better)
Translates to: GCQLTMTARGFPSLVMTVSAVYQ*EGGPVP
Trigger: TGGTACTGGACCACCTTCCAACTGGTATACTGCAGA...GACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTGGCAGAGCGGCTGGTaGGCTGTCAGGTATCACCCA +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCWQSGW*AVRYHP
Trigger: TGGGTGATACCTGACAGCCAACCAGCCGCTCTGCCA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS TCA 90 bp CAACTCGAAAGGTGTACATGGCTTCTGGCTTCAGGTTTCCCACAGTaGGCTGAAGGGACCCAGGCTGTGTTGTATTCAATGCTCGTTCCC +
Preference number: 5 (lower is better)
Translates to: QLERCTWLLASGFPQ*AEGTQAVLYSMLVP
Trigger: GGGAACGAGCATTGAATACAACACAGCCTGGGTCCCTTCAGCTCACTGTGGGAAACCTGAAGCCAGAAGCCATGTACACCTTTCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp GAAAAAGACCGTGAAAGTTTGAATGTTCCCTTTCGCTTCTGCAGGTaGGCGCCAGCTGAGACGGACAAATCGGCTGGAAACCAAGACAGG +
Preference number: 5 (lower is better)
Translates to: EKDRESLNVPFRFCR*APAETDKSAGNQDR
Trigger: CCTGTCTTGGTTTCCAGCCGATTTGTCCGTCTCAGCTGGCGCCCACCTGCAGAAGCGAAAGGGAACATTCAAACTTTCACGGTCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp TCCCCATTCATTGTAAGCCACAACTCGAAAGGTGTACATGGCTTCTaGCTTCAGGTTTCCCACAGTGAGCTGAAGGGACCCAGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: SPFIVSHNSKGVHGF*LQVSHSELKGPRLC
Trigger: ACACAGCCTGGGTCCCTTCAGCTCACTGTGGGAAACCTGAAGCCAGAAGCCATGTACACCTTTCGAGTTGTGGCTTACAATGAATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp CACAGCCTGTACACCTACTGGTGGGAGCATGGGGGTGGAGAGATCTaGGACCGAGGTGGGGAAATCATCAAGCAAAGGATAATAATCAAC +
Preference number: 5 (lower is better)
Translates to: HSLYTYWWEHGGGEI*DRGGEIIKQRIIIN
Trigger: GTTGATTATTATCCTTTGCTTGATGATTTCCCCACCTCGGTCCCAGATCTCTCCACCCCCATGCTCCCACCAGTAGGTGTACAGGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGCATGGGCTGGAGTCAGGTCTTGTaGGTTCTTCTGCCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: GIGVRSCWFFCQWIVGMGWSQVL*VLLPVD
Trigger: ATCCACTGGCAGAAGAACCAACAAGACCTGACTCCA...GCCCATGCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGGGAGTCACCTGGGATaGGAGTCAGGTCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYGSHLG*ESGLVG
Trigger: ACCAACAAGACCTGACTCCAATCCCAGGTGACTCCC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGGGAGTCACCTGGGATaGGAGTCAGGTCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEGSHLG*ESGLVG
Trigger: ACCAACAAGACCTGACTCCAATCCCAGGTGACTCCC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCACCTTTTTAGACCTGAGTaGGATGACTTCCTCGCCTCG +
Preference number: 5 (lower is better)
Translates to: RVFHFQSPEEDRIREWPHLFRPE*DDFLAS
Trigger: CGAGGCGAGGAAGTCATCCAACTCAGGTCTAAAAAG...GTGGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGGTGGTCCAGTACCATaGACTGTCATGGCTGACACC +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYGGPVP*TVMADT
Trigger: GGTGTCAGCCATGACAGTCAATGGTACTGGACCACC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCTCGCACCACGATGTTaGGGTTCAAGGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCLAPRC*GSREES
Trigger: GGACTCCTCCCTTGAACCCAAACATCGTGGTGCGAG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGTGGCTGCCCTTCCTTTaGCCAGCACTGTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQWLPFL*PALWVA
Trigger: GGCCACCCACAGTGCTGGCAAAAGGAAGGGCAGCCA...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTGCGGAGTGGGTGAGTaGGTCGAACACAAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCCGVGE*VEHKLW
Trigger: CCACAGCTTGTGTTCGACCAACTCACCCACTCCGCA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS TCA 90 bp TCAATGCTCGTTCCCTGTTGTCACCTTCTCTGGAGAAAAAGACCGTaGAAGTTTGAATGTTCCCTTTCGCTTCTGCAGGTGGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SMLVPCCHLLWRKRP*KFECSLSLLQVGAS
Trigger: GCTGGCGCCCACCTGCAGAAGCGAAAGGGAACATTCAAACTTTCACGGTCTTTTTCTCCAGAGAAGGTGACAACAGGGAACGAGCATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 90 bp AGGAGATGGAAGGCAATCCTGTGGCCGGGCTGTGCATTAAAAGGTTaGGGCTGGTTCCTTGTCGTCGGTTGGGTAAAGTTGAAGAGACAA +
Preference number: 5 (lower is better)
Translates to: RRWKAILWPGCALKG*GWFLVVGWVKLKRQ
Trigger: TTGTCTCTTCAACTTTACCCAACCGACGACAAGGAACCAGCCTCAACCTTTTAATGCACAGCCCGGCCACAGGATTGCCTTCCATCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS GCA 90 bp TCTGGAGAAAAAGACCGTGAAAGTTTGAATGTTCCCTTTCGCTTCTaGAGGTGGGCGCCAGCTGAGACGGACAAATCGGCTGGAAACCAA +
Preference number: 5 (lower is better)
Translates to: SGEKDRESLNVPFRF*RWAPAETDKSAGNQ
Trigger: TTGGTTTCCAGCCGATTTGTCCGTCTCAGCTGGCGCCCACCTGCAGAAGCGAAAGGGAACATTCAAACTTTCACGGTCTTTTTCTCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS-3UTR CAA 90 bp AGTCGGCTGATCTGCAATGCTCCAGAGGGCAAGACCACCACTCGGGAGTCACCTGGAATGAAGTATGTTTaGTATCAGCAGAGACCCATT +
Preference number: 5 (lower is better)
Translates to: SRLICNAPEGKTTTRESPGMKYV*YQQRPI
Trigger: AATGGGTCTCTGCTGATACAAAACATACTTCATTCC...AGGTGACTCCCGAGTGGTGGTCTTGCCCTCTGGAGCATTGCAGATCAGCCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp GAGTTTGGGGCCTGGGGACAGCTGCATCGGCTGTTGCAACTCTCTAGCGAGTGTGGAATGAAGTATGTTTaGTATCAGCAGAGACCCATT +
Preference number: 5 (lower is better)
Translates to: EFGAWGQLHRLLQLSSECGMKYV*YQQRPI
Trigger: AATGGGTCTCTGCTGATACAAAACATACTTCATTCC...ACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCCAGGCCCCAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTCTTCTGCCAGTGGATaGTTGGCATGGGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVSSASG*LAWAPQ
Trigger: TTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGCGATTGGAGTCAGGTCTaGTTGGTTCTTCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SPGIGVRSCWFFCQWIVGDWSQV*LVLLPV
Trigger: CACTGGCAGAAGAACCAACAAGACCTGACTCCAATC...GCCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCTTGGACTGGACCGTTaGCATAGGCAGGGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQLGLDR*HRQGVP
Trigger: GGGAACCCCCTGCCTATGCAAACGGTCCAGTCCAAG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCGTGGCCCCACTCCTTTaGAATTTCGTGCTTGAATTC +
Preference number: 5 (lower is better)
Translates to: SGCSTFRVLKRIGSESGPVAPLL*NFVLEF
Trigger: GAATTCAAGCACGAAATTCAAAAGGAGTGGGGCCAC...GGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATGGCTGCCCTTCCTTTaGCCAGCACTGTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEWLPFL*PALWVA
Trigger: GGCCACCCACAGTGCTGGCAAAAGGAAGGGCAGCCA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGAGGTCTTGGCAACTTaGGATGGGAGAGTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCEVLAT*DGRVPS
Trigger: GGAAGGGACTCTCCCATCCAAAGTTGCCAAGACCTC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTACGACAGCAGGATTGTaGGACTGGGCATCCATGGGA +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVTTAGL*DWASMG
Trigger: TCCCATGGATGCCCAGTCCAACAATCCTGCTGTCGT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCTCACGACAGCAGGATaGTTGGACTGGGCATCCATG +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCLTTAG*LDWASM
Trigger: CATGGATGCCCAGTCCAACAATCCTGCTGTCGTGAG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGGCACTTTCTAGCGTaGGCACCGGGATGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSGHFLA*APGWRS
Trigger: TGAGCGCCATCCCGGTGCCAACGCTAGAAAGTGCCC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGGGCACTTTCTAGCGTaGGCACCGGGATGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEGHFLA*APGWRS
Trigger: TGAGCGCCATCCCGGTGCCAACGCTAGAAAGTGCCC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCTGGCAGAGCGGCTGGTaGGCTGTCAGGTATCACCCA +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSWQSGW*AVRYHP
Trigger: TGGGTGATACCTGACAGCCAACCAGCCGCTCTGCCA...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS TCA 90 bp GAGGAGGACATTTCCTCCCCGCATTGTGACGGCATCAGAAGGTTCTaGGAGGAAGCGCAGTGCTGTGAAAGCTTTAATTTGAAAACCTGG +
Preference number: 5 (lower is better)
Translates to: EEDISSPHCDGIRRF*EEAQCCESFNLKTW
Trigger: CCAGGTTTTCAAATTAAAGCTTTCACAGCACTGCGCTTCCTCTCAGAACCTTCTGATGCCGTCACAATGCGGGGAGGAAATGTCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412726.5
CDS TCA 90 bp GAGGAGGACATTTCCTCCCCGCATTGTGACGGCATCAGAAGGTTCTaGGAGGAAGCGCAGTGCTGTGAAAGCTTTAATTTGAAAACCGGT +
Preference number: 5 (lower is better)
Translates to: EEDISSPHCDGIRRF*EEAQCCESFNLKTG
Trigger: ACCGGTTTTCAAATTAAAGCTTTCACAGCACTGCGCTTCCTCTCAGAACCTTCTGATGCCGTCACAATGCGGGGAGGAAATGTCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS GCA 90 bp AATGGGAACTTGACTCTAACCTCTCAATGGAATAATATCGCTGCTTaGTGTCCACACGCACTGTCTCAGCGTAAGGGCTCCCAACGCCAT +
Preference number: 5 (lower is better)
Translates to: NGNLTLTSQWNNIAA*CPHALSQRKGSQRH
Trigger: ATGGCGTTGGGAGCCCTTACGCTGAGACAGTGCGTGTGGACAGCAAGCAGCGATATTATTCCATTGAGAGGTTAGAGTCAAGTTCCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp AGATCATCCTGTTCATACACATTGGCTGAATCCTCTGTTGGTTTGTaGCTCTCCTCAGACACTTCAGGGGCTGTTGGCACAGACACAGGA +
Preference number: 5 (lower is better)
Translates to: RSSCSYTLAESSVGL*LSSDTSGAVGTDTG
Trigger: TCCTGTGTCTGTGCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTGTATGAACAGGATGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCCAATGACTTCACACTaGAGTAGCACTGTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEPMTSH*SSTVSP
Trigger: GGGAGACACAGTGCTACTCAAGTGTGAAGTCATTGG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCTCTTCTGCCAGTGGATaGTTGGCATGGGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: FLSRKFTSSLSEPQPQPSSSASG*LAWAPQ
Trigger: TTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGA...GCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGATTGGAGTCAGGTCTaGTTGGTTCTTCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYDWSQV*LVLLPV
Trigger: CACTGGCAGAAGAACCAACAAGACCTGACTCCAATC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGGCCACCTTGATGGGTaGAGAACTCTCTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAGHLDG*RTLSRS
Trigger: GGACCGGGAGAGAGTTCTCAACCCATCAAGGTGGCC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCACTTGGACTGGACCGTTaGCATAGGCAGGGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSLGLDR*HRQGVP
Trigger: GGGAACCCCCTGCCTATGCAAACGGTCCAGTCCAAG...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCTCGCACCACGATGTTaGGGTTCAAGGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSLAPRC*GSREES
Trigger: GGACTCCTCCCTTGAACCCAAACATCGTGGTGCGAG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGAGCAACACAAAATGACAGATaGAGCCACCATACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: MTARGFPSLVMTVKSLGATQNDR*SHHTLV
Trigger: GACCAAGGTATGGTGGCTCAATCTGTCATTTTGTGT...TGCTCCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp TCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCGGGTGCAAGAGCAGCTaGAAAATTATGCTGAGCTTA +
Preference number: 5 (lower is better)
Translates to: SGCSTFRVLKRIGSESGPGCKSS*KIMLSL
Trigger: TAAGCTCAGCATAATTTTCAAGCTGCTCTTGCACCC...GGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGACTTCAGTGAAGGCTTaGCCTGGACTGGACATCTCT +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKETSVKA*PGLDIS
Trigger: AGAGATGTCCAGTCCAGGCAAAGCCTTCACTGAAGT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGTGGAGCGCTCTCACTaGTTACTGGGGTGTCCGCCA +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAVERSH*LLGCPP
Trigger: TGGCGGACACCCCAGTAACAAGTGAGAGCGCTCCAC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR CAA 90 bp GGGCCTGGGGACAGCTGCATCGGCTGTTGCAACTCTCTAGCGAGTGTCATCCATATCCATCCATATACTTaGAGTTATAAACTGCCATGG +
Preference number: 5 (lower is better)
Translates to: GPGDSCIGCCNSLASVIHIHPYT*SYKLPW
Trigger: CCATGGCAGTTTATAACTCAAAGTATATGGATGGAT...ATGGATGACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCCAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS TCA 90 bp CTGGAGTCTCTGCAGTATACCAGTTGGAAGGTGGTCCAGTACCATTaGCTGTCATGGCTGACACCTGGAAACTGTACTGACTTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: LESLQYTSWKVVQYH*LSWLTPGNCTDFLS
Trigger: AGAAAGGAAGTCAGTACAGTTTCCAGGTGTCAGCCATGACAGTCAATGGTACTGGACCACCTTCCAACTGGTATACTGCAGAGACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS GCA 90 bp GACTGGTGTGAGGTCTTGGCAACTTTGGATGGGAGAGTCCCTTCCTaGAGGGTCAGTGCCAGATGGCTTTTCAATATTTTTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: DWCEVLATLDGRVPS*RVSARWLFNIFHLH
Trigger: ATGGAGATGAAAAATATTGAAAAGCCATCTGGCACTGACCCTGCAGGAAGGGACTCTCCCATCCAAAGTTGCCAAGACCTCACACCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 90 bp GATTATCTGGGTGGCCTCAATGTAAACACAAGGATCCAGCAAAGTTaGCTTCTAGTAAGGGTCCTCTCCCTGGCTTCCAGACAACACCTT +
Preference number: 5 (lower is better)
Translates to: DYLGGLNVNTRIQQS*LLVRVLSLASRQHL
Trigger: AAGGTGTTGTCTGGAAGCCAGGGAGAGGACCCTTACTAGAAGCCAACTTTGCTGGATCCTTGTGTTTACATTGAGGCCACCCAGATAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS-3UTR CAA 90 bp GTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGTCAGCAGAGACCCATTaGAAAGTTGCTGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: VTWDWSQVLLVLLPVDCWSAETH*KVAASF
Trigger: AAAGGAAGCAGCAACTTTCAAATGGGTCTCTGCTGA...CCAACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp GGCTGCCAACTCACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCGGAATGAAGTATGTTTaGTATCAGCAGAGACCCATT +
Preference number: 5 (lower is better)
Translates to: GCQLTMTARGFPSLVMTVGMKYV*YQQRPI
Trigger: AATGGGTCTCTGCTGATACAAAACATACTTCATTCC...GACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTGAGTTGGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGCCAATGACTTCACACTaGAGTAGCACTGTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: PLKKIYIFLIRAAASAKQPMTSH*SSTVSP
Trigger: GGGAGACACAGTGCTACTCAAGTGTGAAGTCATTGG...CTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATCCAATGTCCCCCGGTaGGAGTCGGCTGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWESNVPR*ESADLQ
Trigger: TTGCAGATCAGCCGACTCCAACCGGGGGACATTGGA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCTTTTTAGACCTGAGTaGGATGACTTCCTCGCCTCG +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCLFRPE*DDFLAS
Trigger: CGAGGCGAGGAAGTCATCCAACTCAGGTCTAAAAAG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGAGGTGGGGGCTGCTTCATACGTGGTGGCATGTGCAGTCATGCTCCAAGTACTTTGGAGATAAGCAAGTaGCTTCCACCCAATAAAGAA +
Preference number: 5 (lower is better)
Translates to: RGGGCFIRGGMCSHAPSTLEISK*LPPNKE
Trigger: TTCTTTATTGGGTGGAAGCAACTTGCTTATCTCCAA...AGTACTTGGAGCATGACTGCACATGCCACCACGTATGAAGCAGCCCCCACCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp TCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCACTCCTTTTAATGCTCGTTCCCTGTaGTCACCTTCTCTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: STFRVLKRIGSESGPTPFNARSL*SPSLEK
Trigger: TTTCTCCAGAGAAGGTGACAACAGGGAACGAGCATT...AAAAGGAGTGGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp AGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGAACTTCAGGGACCCAGGCTGTGTaGTATTCAATGCTCGTTCCC +
Preference number: 5 (lower is better)
Translates to: RKFTSSLSEPQPQPSRTSGTQAV*YSMLVP
Trigger: GGGAACGAGCATTGAATACAACACAGCCTGGGTCCC...TGAAGTTCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp TTTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGGGTGGTCCAGTACCATaGACTGTCATGGCTGACACC +
Preference number: 5 (lower is better)
Translates to: FPLKKIYIFLIRAAASAKGGPVP*TVMADT
Trigger: GGTGTCAGCCATGACAGTCAATGGTACTGGACCACC...CTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGGTGGTCCAGTACCATaGACTGTCATGGCTGACACC +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSGGPVP*TVMADT
Trigger: GGTGTCAGCCATGACAGTCAATGGTACTGGACCACC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGTGGCCCCACTCCTTTaGAATTTCGTGCTTGAATTC +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYVAPLL*NFVLEF
Trigger: GAATTCAAGCACGAAATTCAAAAGGAGTGGGGCCAC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCCATCTTTCTTCCACTaGATCACTGGAACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCPSFFH*ITGTPR
Trigger: CCGAGGAGTTCCAGTGATCAAGTGGAAGAAAGATGG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCTCACGACAGCAGGATaGTTGGACTGGGCATCCATG +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQLTTAG*LDWASM
Trigger: CATGGATGCCCAGTCCAACAATCCTGCTGTCGTGAG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAGCATAGGTGGTTGTaGGGTAGTTGGTCCTTCACT +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCQHRWL*GSWSFT
Trigger: AGTGAAGGACCAACTACCCAACAACCACCTATGCTG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGAATCCTCTGTTGGTTaGTGGCTCTCCTCAGACACT +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCESSVG*WLSSDT
Trigger: AGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGCTGTGCATTAAAAGGTaGAGGCTGGTTCCTTGTCGT +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKELCIKR*RLVPCR
Trigger: ACGACAAGGAACCAGCCTCAACCTTTTAATGCACAG...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS TCA 90 bp AGTATACCAGTTGGAAGGTGGTCCAGTACCATTGACTGTCATGGCTaGCACCTGGAAACTGTACTGACTTCCTTTCTCCAGTCCTGTGAA +
Preference number: 5 (lower is better)
Translates to: SIPVGRWSSTIDCHG*HLETVLTSFLQSCE
Trigger: TTCACAGGACTGGAGAAAGGAAGTCAGTACAGTTTCCAGGTGTCAGCCATGACAGTCAATGGTACTGGACCACCTTCCAACTGGTATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 90 bp CCATTTGAAAGTTGCTGCTTCCTTTCATCCATTCCCAAGGCCAGATaGATGCCATCTTTCTTCCACTTGATCACTGGAACTCCTCGGTCG +
Preference number: 5 (lower is better)
Translates to: PFESCCFLSSIPKAR*MPSFFHLITGTPRS
Trigger: CGACCGAGGAGTTCCAGTGATCAAGTGGAAGAAAGATGGCATTCATCTGGCCTTGGGAATGGATGAAAGGAAGCAGCAACTTTCAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000578080.1
CDS TCA 90 bp GCCATTAAGAAGGCTGAGAGGAGTGCCCTGTACATGTTTTGGAAATaGTTGCAAGGTCACTCAATCTCAAACGCCTGCTCTGGTCAGTAC +
Preference number: 5 (lower is better)
Translates to: AIKKAERSALYMFWK*LQGHSISNACSGQY
Trigger: GTACTGACCAGAGCAGGCGTTTGAGATTGAGTGACCTTGCAATCATTTCCAAAACATGTACAGGGCACTCCTCTCAGCCTTCTTAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579666.1
CDS CCA 90 bp AATTTTAAAGATGCCCTTACATTGGCTGAATCCTCTGTTGGTTTGTaGCTCTCCTCAGACACTTCAGGGGCTGTTGGCACAGACACAGGA +
Preference number: 5 (lower is better)
Translates to: NFKDALTLAESSVGL*LSSDTSGAVGTDTG
Trigger: TCCTGTGTCTGTGCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTAAGGGCATCTTTAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579702.1
CDS-3UTR CAA 90 bp TCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTGGCCCCACTCCTTTTTCAGCAGAGACCCATTaGAAAGTTGCTGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: STFRVLKRIGSESGPTPFSAETH*KVAASF
Trigger: AAAGGAAGCAGCAACTTTCAAATGGGTCTCTGCTGA...AAAAGGAGTGGGGCCACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATCTTCTGCCAGTGGATaGTTGGCATGGGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSSSASG*LAWAPQ
Trigger: TTGGGGAGCCCATGCCAACAATCCACTGGCAGAAGA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCTGGAGTCAGGTCTTGTaGGTTCTTCTGCCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: FLSRKFTSSLSEPQPQPSWSQVL*VLLPVD
Trigger: ATCCACTGGCAGAAGAACCAACAAGACCTGACTCCA...GCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CACAATGACGGCACGAGGCTTCCCTTCCCTAGTAATGACTGTCAAGTCCTTGGGTCATCATCTGTCACATaGGAGATAAGCAAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: HNDGTRLPFPSNDCQVLGSSSVT*EISKLL
Trigger: AAGCAACTTGCTTATCTCCAATGTGACAGATGATGA...CCCAAGGACTTGACAGTCATTACTAGGGAAGGGAAGCCTCGTGCCGTCATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTAATGCTCGTTCCCTGTaGTCACCTTCTCTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCNARSL*SPSLEK
Trigger: TTTCTCCAGAGAAGGTGACAACAGGGAACGAGCATT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGGGACCCAGGCTGTGTaGTATTCAATGCTCGTTCCC +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEGTQAV*YSMLVP
Trigger: GGGAACGAGCATTGAATACAACACAGCCTGGGTCCC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGGCAGCCAGCTAACTTaGATACTTCTTGAATTGACC +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEGSQLT*ILLELT
Trigger: GGTCAATTCAAGAAGTATCAAAGTTAGCTGGCTGCC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATACTCCTTCTCCGGCATaGTTAAAAGCTTTTAGGGAG +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYTPSPA*LKAFRE
Trigger: CTCCCTAAAAGCTTTTAACAATGCCGGAGAAGGAGT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATTCTTAGGGACAGAGTaGTCTGCCCAGCTGACCCTC +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEFLGTE*SAQLTL
Trigger: GAGGGTCAGCTGGGCAGACAACTCTGTCCCTAAGAA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATTCTTAGGGACAGAGTaGTCTGCCCAGCTGACCCTC +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQFLGTE*SAQLTL
Trigger: GAGGGTCAGCTGGGCAGACAACTCTGTCCCTAAGAA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCACCTCAGACGTCTTTaGGTTCTTAGGGACAGAGTT +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCHLRRL*VLRDRV
Trigger: AACTCTGTCCCTAAGAACCAAAAGACGTCTGAGGTG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGGTGCATTTGTCCAATaGGCGGCTCATTTAGGGTGC +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSGAFVQ*AAHLGC
Trigger: GCACCCTAAATGAGCCGCCAATTGGACAAATGCACC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGAGGTCTTGGCAACTTaGGATGGGAGAGTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSEVLAT*DGRVPS
Trigger: GGAAGGGACTCTCCCATCCAAAGTTGCCAAGACCTC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGACTGGTGTGAGGTCTaGGCAACTTTGGATGGGAGA +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSDWCEV*ATLDGR
Trigger: TCTCCCATCCAAAGTTGCCAAGACCTCACACCAGTC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAACGACAGCAGGATTGTaGGACTGGGCATCCATGGGA +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIATTAGL*DWASMG
Trigger: TCCCATGGATGCCCAGTCCAACAATCCTGCTGTCGT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTCCTGTTCATACACATaGGCTGAATCCTCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSCSYT*AESSVG
Trigger: ACCAACAGAGGATTCAGCCAATGTGTATGAACAGGA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCACTGGTTAGAGTTCTaGGACACAGGTGTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCHWLEF*DTGVLF
Trigger: AAACAGCACACCTGTGTCCAAGAACTCTAACCAGTG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGTCGGTTGGGTAAAGTaGAAGAGACAATTCCGCGCG +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQVGWVK*KRQFRA
Trigger: CGCGCGGAATTGTCTCTTCAACTTTACCCAACCGAC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS TCA 90 bp GAACAAACAACAATAAGAACAACAATGGCCTGGGGTGGCCTGGGGTaGATGGACAGTACTCATTGGTTTAGATGCTATTACACAGCGCCA +
Preference number: 5 (lower is better)
Translates to: EQTTIRTTMAWGGLG*MDSTHWFRCYYTAP
Trigger: TGGCGCTGTGTAATAGCATCTAAACCAATGAGTACTGTCCATTCACCCCAGGCCACCCCAGGCCATTGTTGTTCTTATTGTTGTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579702.1
CDS CCA 90 bp GAGATGTTGTGTCTTCTGACTTGTATTTTGCACTTGCAGAAAAGCTaGTTCTCCACCGGACGGTGTAAAGTCGCACCTCAGACGTCTTTT +
Preference number: 5 (lower is better)
Translates to: EMLCLLTCILHLQKS*FSTGRCKVAPQTSF
Trigger: AAAAGACGTCTGAGGTGCGACTTTACACCGTCCGGTGGAGAACCAGCTTTTCTGCAAGTGCAAAATACAAGTCAGAAGACACAACATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000579941.1
ENST00000581580.5
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTCAGCAGAGACCCATTaGAAAGTTGCTGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCSAETH*KVAASF
Trigger: AAAGGAAGCAGCAACTTTCAAATGGGTCTCTGCTGA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCCAATGACTTCACACTaGAGTAGCACTGTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQPMTSH*SSTVSP
Trigger: GGGAGACACAGTGCTACTCAAGTGTGAAGTCATTGG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGTGGAGTCAGGTCTTGTaGGTTCTTCTGCCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQWSQVL*VLLPVD
Trigger: ATCCACTGGCAGAAGAACCAACAAGACCTGACTCCA...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATGGGGAGTCACCTGGGATaGGAGTCAGGTCTTGTTGGT +
Preference number: 5 (lower is better)
Translates to: NFINKINRHASVCFIRCMGSHLG*ESGLVG
Trigger: ACCAACAAGACCTGACTCCAATCCCAGGTGACTCCC...CATACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGTTGATACTTCTTGAATaGACCACTTCCAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: PLKKIYIFLIRAAASAKQLILLE*TTSRET
Trigger: CGTCTCCCTGGAAGTGGTCAATTCAAGAAGTATCAA...CTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTTGATACTTCTTGAATaGACCACTTCCAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVLILLE*TTSRET
Trigger: CGTCTCCCTGGAAGTGGTCAATTCAAGAAGTATCAA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATATGAAGAGAGCTTGGTaGATCAGGAACTTGAGATTC +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYMKRAW*IRNLRF
Trigger: GAATCTCAAGTTCCTGATCAACCAAGCTCTCTTCAT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCCATCTTTCTTCCACTaGATCACTGGAACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSPSFFH*ITGTPR
Trigger: CCGAGGAGTTCCAGTGATCAAGTGGAAGAAAGATGG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTATCTCCATGACGACCTaGGTCATTAGCCATTTTGTC +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVISMTT*VISHFV
Trigger: GACAAAATGGCTAATGACCAAGGTCGTCATGGAGAT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGACTGGTGTGAGGTCTaGGCAACTTTGGATGGGAGA +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEDWCEV*ATLDGR
Trigger: TCTCCCATCCAAAGTTGCCAAGACCTCACACCAGTC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGAAGCAAAGGGGATCTaGCTTTTCCAGCCAACCCAA +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSEAKGI*LFQPTQ
Trigger: TTGGGTTGGCTGGAAAAGCAAGATCCCCTTTGCTTC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGGAAGCAAAGGGGATCTaGCTTTTCCAGCCAACCCAA +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQEAKGI*LFQPTQ
Trigger: TTGGGTTGGCTGGAAAAGCAAGATCCCCTTTGCTTC...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTCCTGTTCATACACATaGGCTGAATCCTCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVSCSYT*AESSVG
Trigger: ACCAACAGAGGATTCAGCCAATGTGTATGAACAGGA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAAAACATCCAATCCTTaGGTGCTATGGCATGAGAGA +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEKTSNP*VLWHER
Trigger: TCTCTCATGCCATAGCACCAAAGGATTGGATGTTTT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATGGCCTTAGTGAAGCTTaGAAATTGTATCACAGTGTG +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYGLSEA*KLYHSV
Trigger: CACACTGTGATACAATTTCAAAGCTTCACTAAGGCC...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTCAAACTAGCTCCCTTTaGGCGATTCAGCTGCATAAA +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVQTSSL*AIQLHK
Trigger: TTTATGCAGCTGAATCGCCAAAAGGGAGCTAGTTTG...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTTCACAGGTTTCTTCTaGTCAAGAGATCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEFTGFF*SRDQET
Trigger: AGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAACAGGATGGCTCTCCTaGTGTAGCTGGAACCAAAGC +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWETGWLS*CSWNQS
Trigger: GCTTTGGTTCCAGCTACACAAGGAGAGCCATCCTGT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGACTTCAGTGAAGGCTTaGCCTGGACTGGACATCTCT +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQTSVKA*PGLDIS
Trigger: AGAGATGTCCAGTCCAGGCAAAGCCTTCACTGAAGT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGAGCTGGAGATGCTGTaGGTTTTTCTTCCGAGAGCC +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQELEML*VFLPRA
Trigger: GGCTCTCGGAAGAAAAACCAACAGCATCTCCAGCTC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTTGAAAACCGGTTACTaGAAGATGCGCGCTGAACAA +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVLKTGY*KMRAEQ
Trigger: TTGTTCAGCGCGCATCTTCAAGTAACCGGTTTTCAA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS TCA 90 bp AATGGAAAGCTCTGCACTGTAACCAAACCTTCCCAAATAGAATTCTaGGCGTATTCAAGGGCCCTGGGATACATTTTCCAGACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: NGKLCTVTKPSQIEF*AYSRALGYIFQTAA
Trigger: TGCAGCAGTCTGGAAAATGTATCCCAGGGCCCTTGAATACGCTCAGAATTCTATTTGGGAAGGTTTGGTTACAGTGCAGAGCTTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578080.1
CDS GCA 90 bp TTAAGAAGGCTGAGAGGAGTGCCCTGTACATGTTTTGGAAATGATTaGAAGGTCACTCAATCTCAAACGCCTGCTCTGGTCAGTACAAAC +
Preference number: 5 (lower is better)
Translates to: LRRLRGVPCTCFGND*KVTQSQTPALVSTN
Trigger: GTTTGTACTGACCAGAGCAGGCGTTTGAGATTGAGTGACCTTGCAATCATTTCCAAAACATGTACAGGGCACTCCTCTCAGCCTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579666.1
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGGGAATGAAGTATGTTTaGTATCAGCAGAGACCCATT +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEGMKYV*YQQRPI
Trigger: AATGGGTCTCTGCTGATACAAAACATACTTCATTCC...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GAGTCACCTGGGATTGGAGTCAGGTCTTGTTGGTTCTTCTGCCAGTGGATTGTTGGAATGAAGTATGTTTaGTATCAGCAGAGACCCATT +
Preference number: 5 (lower is better)
Translates to: ESPGIGVRSCWFFCQWIVGMKYV*YQQRPI
Trigger: AATGGGTCTCTGCTGATACAAAACATACTTCATTCC...AACAATCCACTGGCAGAAGAACCAACAAGACCTGACTCCAATCCCAGGTGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579349.1
ENST00000581559.1
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATGGAGTCAGGTCTTGTaGGTTCTTCTGCCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQWSQVL*VLLPVD
Trigger: ATCCACTGGCAGAAGAACCAACAAGACCTGACTCCA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGATTGGAGTCAGGTCTaGTTGGTTCTTCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSDWSQV*LVLLPV
Trigger: CACTGGCAGAAGAACCAACAAGACCTGACTCCAATC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGTACATTGGATGGTCTTaGCAGAAAATACAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEYIGWS*QKIQLS
Trigger: AGACAGCTGTATTTTCTGCAAAGACCATCCAATGTA...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCACTTTTTAGACCTGAGTaGGATGACTTCCTCGCCTCG +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIALFRPE*DDFLAS
Trigger: CGAGGCGAGGAAGTCATCCAACTCAGGTCTAAAAAG...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTTGGAGATAAGCAAGTaGCTTCCACCCAATAAAGAA +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYLEISK*LPPNKE
Trigger: TTCTTTATTGGGTGGAAGCAACTTGCTTATCTCCAA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTCATCATCTGTCACATaGGAGATAAGCAAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYSSSVT*EISKLL
Trigger: AAGCAACTTGCTTATCTCCAATGTGACAGATGATGA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGGTACCAGAGGTTGTTaGGCTCCAGTGTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAGTRGC*APVFPS
Trigger: AGATGGAAACACTGGAGCCAAACAACCTCTGGTACC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGTACCAGAGGTTGTTaGGCTCCAGTGTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSGTRGC*APVFPS
Trigger: AGATGGAAACACTGGAGCCAAACAACCTCTGGTACC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATCTGCAGTATACCAGTaGGAAGGTGGTCCAGTACCA +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWESAVYQ*EGGPVP
Trigger: TGGTACTGGACCACCTTCCAACTGGTATACTGCAGA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATCTGCAGTATACCAGTaGGAAGGTGGTCCAGTACCA +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSSAVYQ*EGGPVP
Trigger: TGGTACTGGACCACCTTCCAACTGGTATACTGCAGA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCTTCTGACTTGTATTTaGCACTTGCAGAAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCLLTCI*HLQKSW
Trigger: CCAGCTTTTCTGCAAGTGCAAAATACAAGTCAGAAG...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACAGCATAGGTGGTTGTaGGGTAGTTGGTCCTTCACT +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQQHRWL*GSWSFT
Trigger: AGTGAAGGACCAACTACCCAACAACCACCTATGCTG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGAATCCTCTGTTGGTTaGTGGCTCTCCTCAGACACT +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAESSVG*WLSSDT
Trigger: AGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCCACTGGTTAGAGTTCTaGGACACAGGTGTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSHWLEF*DTGVLF
Trigger: AAACAGCACACCTGTGTCCAAGAACTCTAACCAGTG...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATTTTCTAATGAACCATTaGAACAGCCCTCTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYFLMNH*NSPLFD
Trigger: GTCAAAGAGAGGGCTGTTCAAATGGTTCATTAGAAA...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTGCATCTCCAGAAAGTaGTGGGCTCTGTATAGTATA +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCCISRK*WALYSI
Trigger: TATACTATACAGAGCCCACAACTTTCTGGAGATGCA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTACAAAAACAGAGACTaGAGTGTATGGCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCYKNRD*SVWLLL
Trigger: CAGAAGCAGCCATACACTCAAGTCTCTGTTTTTGTA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTACAAAAACAGAGACTaGAGTGTATGGCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVYKNRD*SVWLLL
Trigger: CAGAAGCAGCCATACACTCAAGTCTCTGTTTTTGTA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGGAATGAAGTATGTTTaGTATCAGCAGAGACCCATT +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVGMKYV*YQQRPI
Trigger: AATGGGTCTCTGCTGATACAAAACATACTTCATTCC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTTCATCATCTGTCACATaGGAGATAAGCAAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCSSSVT*EISKLL
Trigger: AAGCAACTTGCTTATCTCCAATGTGACAGATGATGA...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAATGCTCGTTCCCTGTaGTCACCTTCTCTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWENARSL*SPSLEK
Trigger: TTTCTCCAGAGAAGGTGACAACAGGGAACGAGCATT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CCACTGATTGTTTCCATAATCCAGTCATCAATTGGGATGTTCTTGTCCAAGGTAGGTACCAGAGGTTGTTaGGCTCCAGTGTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: PLIVSIIQSSIGMFLSKVGTRGC*APVFPS
Trigger: AGATGGAAACACTGGAGCCAAACAACCTCTGGTACC...TACCTTGGACAAGAACATCCCAATTGATGACTGGATTATGGAAACAATCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAATAGGTACCAGAGGTaGTTTGGCTCCAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWENRYQR*FGSSVS
Trigger: GGAAACACTGGAGCCAAACAACCTCTGGTACCTATT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAATAGGTACCAGAGGTaGTTTGGCTCCAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSNRYQR*FGSSVS
Trigger: GGAAACACTGGAGCCAAACAACCTCTGGTACCTATT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATTTTGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTTCACATGAAGAGAGCTaGGTTGATCAGGAACTTGAG +
Preference number: 5 (lower is better)
Translates to: ILSGCSTFRVLKRIGSESSHEES*VDQELE
Trigger: CTCAAGTTCCTGATCAACCAAGCTCTCTTCATGTGA...ACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTTACATAATGGGAACTaGACTCTAACCTCTCAATGG +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVLHNGN*TLTSQW
Trigger: CCATTGAGAGGTTAGAGTCAAGTTCCCATTATGTAA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGAAACTCCTTCTCCGGCATaGTTAAAAGCTTTTAGGGAG +
Preference number: 5 (lower is better)
Translates to: SQENLHLPYQSRSLSQAETPSPA*LKAFRE
Trigger: CTCCCTAAAAGCTTTTAACAATGCCGGAGAAGGAGT...TTCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGTGGCCCCACTCCTTTaGAATTTCGTGCTTGAATTC +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQVAPLL*NFVLEF
Trigger: GAATTCAAGCACGAAATTCAAAAGGAGTGGGGCCAC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGTGGTCATTAGCCATTTaGTCAGGGTGTTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQWSLAI*SGCSTF
Trigger: GAAAGTGGAACACCCTGACAAAATGGCTAATGACCA...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACACCTCAGACGTCTTTaGGTTCTTAGGGACAGAGTT +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQHLRRL*VLRDRV
Trigger: AACTCTGTCCCTAAGAACCAAAAGACGTCTGAGGTG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTGTTGTGTCTTCTGACTaGTATTTTGCACTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCVVSSD*YFALAE
Trigger: TTCTGCAAGTGCAAAATACAAGTCAGAAGACACAAC...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGTTCTATTGCACTCATaGGTGGAGGTAGCAAAGGAT +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSVLLHS*VEVAKD
Trigger: ATCCTTTGCTACCTCCACCAATGAGTGCAATAGAAC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGGACTTTCGGTTCTATaGCACTCATTGGTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAGLSVL*HSLVEV
Trigger: TACCTCCACCAATGAGTGCAATAGAACCGAAAGTCC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGGACTTTCGGTTCTATaGCACTCATTGGTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQGLSVL*HSLVEV
Trigger: TACCTCCACCAATGAGTGCAATAGAACCGAAAGTCC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GTCTGCCATTTCTACGGGATTAGAAGACAGGCGACATTGGCCAGTGCACCATATATTAAACAACAGGCCTaGACAAAGGAAAACATAGGT +
Preference number: 5 (lower is better)
Translates to: VCHFYGIRRQATLASAPYIKQQA*TKENIG
Trigger: ACCTATGTTTTCCTTTGTCAAGGCCTGTTGTTTAAT...ATATGGTGCACTGGCCAATGTCGCCTGTCTTCTAATCCCGTAGAAATGGCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTGAGATTTGCAACCTATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTAGTGAAGCTTTGAAATaGTATCACAGTGTGGTATGG +
Preference number: 5 (lower is better)
Translates to: LRFATYSKLSTQDYPRGCSEALK*YHSVVW
Trigger: CCATACCACACTGTGATACAATTTCAAAGCTTCACT...ACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATAGGTTGCAAATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTTTTCTAATGAACCATTaGAACAGCCCTCTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVFLMNH*NSPLFD
Trigger: GTCAAAGAGAGGGCTGTTCAAATGGTTCATTAGAAA...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGACATATATGAATCATTaGAGGGTAAAGGGAACAGAG +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKETYMNH*RVKGTE
Trigger: CTCTGTTCCCTTTACCCTCAAATGATTCATATATGT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TATTCCAAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGATGACTGGTTTCTTATaGGCTATGATTCACTACGAA +
Preference number: 5 (lower is better)
Translates to: YSKLSTQDYPRGCQVPKEMTGFL*AMIHYE
Trigger: TTCGTAGTGAATCATAGCCAATAAGAAACCAGTCAT...CTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTTGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGTTCCTTGTCGTCGGTaGGGTAAAGTTGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQVPCRR*GKVEET
Trigger: TGTCTCTTCAACTTTACCCAACCGACGACAAGGAAC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS CCA 90 bp CACAACATTCCAGGACAGCATCTTTTCCTTCAATGGCTACTACATTaGATGGTCTTTGCAGAAAATACAGCTGTCTATGCAGTCCTGGAT +
Preference number: 5 (lower is better)
Translates to: HNIPGQHLFLQWLLH*MVFAENTAVYAVLD
Trigger: ATCCAGGACTGCATAGACAGCTGTATTTTCTGCAAAGACCATCCAATGTAGTAGCCATTGAAGGAAAAGATGCTGTCCTGGAATGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
CDS CCA 90 bp CTAGCGAGTGTCATCCATCCATATACTTTGAGTTATAAACTGCCATaGCTATGTTGTCCAAACTTTCTCAGCCTCACATTTCCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LASVIHPYTLSYKLP*LCCPNFLSLTFPSA
Trigger: AGCAGAGGGAAATGTGAGGCTGAGAAAGTTTGGACAACATAGCCATGGCAGTTTATAACTCAAAGTATATGGATGGATGACACTCGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATCAGCAGAGACCCATTaGAAAGTTGCTGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSSAETH*KVAASF
Trigger: AAAGGAAGCAGCAACTTTCAAATGGGTCTCTGCTGA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TTCCTCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCTACATTGGATGGTCTTaGCAGAAAATACAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FLSRKFTSSLSEPQPQPSYIGWS*QKIQLS
Trigger: AGACAGCTGTATTTTCTGCAAAGACCATCCAATGTA...GCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGAACAATCTGTAACCTaGGACTGGACCGTTTGCATA +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSEQSVT*DWTVCI
Trigger: TATGCAAACGGTCCAGTCCAAGGTTACAGATTGTTC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAGAACAATCTGTAACCTaGGACTGGACCGTTTGCATA +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAEQSVT*DWTVCI
Trigger: TATGCAAACGGTCCAGTCCAAGGTTACAGATTGTTC...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATTGATACTTCTTGAATaGACCACTTCCAGGGAGACG +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWELILLE*TTSRET
Trigger: CGTCTCCCTGGAAGTGGTCAATTCAAGAAGTATCAA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGGCAGCCAGCTAACTTaGATACTTCTTGAATTGACC +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQGSQLT*ILLELT
Trigger: GGTCAATTCAAGAAGTATCAAAGTTAGCTGGCTGCC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp TCTCAAGAAAATTTACATCTTCCTTATCAGAGCCGCAGCCTCAGCCAAGCAGAAATGAAGAGAGCTTGGTaGATCAGGAACTTGAGATTC +
Preference number: 5 (lower is better)
Translates to: SQENLHLPYQSRSLSQAEMKRAW*IRNLRF
Trigger: GAATCTCAAGTTCCTGATCAACCAAGCTCTCTTCAT...TTCTGCTTGGCTGAGGCTGCGGCTCTGATAAGGAAGATGTAAATTTTCTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCATGAAGAGAGCTTGGTaGATCAGGAACTTGAGATTC +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSMKRAW*IRNLRF
Trigger: GAATCTCAAGTTCCTGATCAACCAAGCTCTCTTCAT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCATCACATGAAGAGAGCTaGGTTGATCAGGAACTTGAG +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIASHEES*VDQELE
Trigger: CTCAAGTTCCTGATCAACCAAGCTCTCTTCATGTGA...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATCACATGAAGAGAGCTaGGTTGATCAGGAACTTGAG +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWESHEES*VDQELE
Trigger: CTCAAGTTCCTGATCAACCAAGCTCTCTTCATGTGA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAACTCCTTCTCCGGCATaGTTAAAAGCTTTTAGGGAG +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWETPSPA*LKAFRE
Trigger: CTCCCTAAAAGCTTTTAACAATGCCGGAGAAGGAGT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCGTTGAGATCCATGATTaGATGAGTAAGCCTATCACC +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSVEIHD*MSKPIT
Trigger: GGTGATAGGCTTACTCATCAAATCATGGATCTCAAC...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATGGTCATTAGCCATTTaGTCAGGGTGTTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEWSLAI*SGCSTF
Trigger: GAAAGTGGAACACCCTGACAAAATGGCTAATGACCA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGCTTCTGACTTGTATTTaGCACTTGCAGAAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQLLTCI*HLQKSW
Trigger: CCAGCTTTTCTGCAAGTGCAAAATACAAGTCAGAAG...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAATCTCCATGACGACCTaGGTCATTAGCCATTTTGTC +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAISMTT*VISHFV
Trigger: GACAAAATGGCTAATGACCAAGGTCGTCATGGAGAT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGTTCTATTGCACTCATaGGTGGAGGTAGCAAAGGAT +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEVLLHS*VEVAKD
Trigger: ATCCTTTGCTACCTCCACCAATGAGTGCAATAGAAC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGTTCCAAACTTGCCATTaGTTCACTCAGATCATCCTG +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQFQTCH*FTQIIL
Trigger: CAGGATGATCTGAGTGAACAAATGGCAAGTTTGGAA...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAACAAAATAGTGAGCTaGCACTGGTTTGCCATGGCA +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSNKIVS*HWFAMA
Trigger: TGCCATGGCAAACCAGTGCAAGCTCACTATTTTGTT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAACAAACTAGCTCCCTTTaGGCGATTCAGCTGCATAAA +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQQTSSL*AIQLHK
Trigger: TTTATGCAGCTGAATCGCCAAAAGGGAGCTAGTTTG...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTGTTGTGGTGACATCATaGTATATTAATACTACCAGG +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVVVVTS*YINTTR
Trigger: CCTGGTAGTATTAATATACAATGATGTCACCACAAC...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AAACTGAGCACTCAGGATTACCCTCGTGGGTGTCAAGTGCCTAAGGAGAATGTTAAGTTACCTGAAAACTaGGGCAGGCAATTATATACA +
Preference number: 5 (lower is better)
Translates to: KLSTQDYPRGCQVPKENVKLPEN*GRQLYT
Trigger: TGTATATAATTGCCTGCCCAAGTTTTCAGGTAACTT...AACATTCTCCTTAGGCACTTGACACCCACGAGGGTAATCCTGAGTGCTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGTGCATCTCCAGAAAGTaGTGGGCTCTGTATAGTATA +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQCISRK*WALYSI
Trigger: TATACTATACAGAGCCCACAACTTTCTGGAGATGCA...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGTGCAGAGTTTTGCTCTaGCTCTTCTACCAACAACAA +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQCRVLL*LFYQQQ
Trigger: TTGTTGTTGGTAGAAGAGCAAGAGCAAAACTCTGCA...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAGTACAAAAGCCAGCTaGGGTACCCAAACACATCTA +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWESTKAS*GTQTHL
Trigger: TAGATGTGTTTGGGTACCCAAGCTGGCTTTTGTACT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS TCA 90 bp AGATGCTATTACACAGCGCCAGTCAATCTGTCCCTTGATGAAGCATaGATTTTAAAGATGCCCTTACATTGGCTGAATCCTCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: RCYYTAPVNLSLDEA*ILKMPLHWLNPLLV
Trigger: AACCAACAGAGGATTCAGCCAATGTAAGGGCATCTTTAAAATTCATGCTTCATCAAGGGACAGATTGACTGGCGCTGTGTAATAGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579702.1
CDS-3UTR CAA 90 bp AGAACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTAGGCAGCCAGCTAACTTaGATACTTCTTGAATTGACC +
Preference number: 5 (lower is better)
Translates to: RTSLTRLIVTPVSASSGVGSQLT*ILLELT
Trigger: GGTCAATTCAAGAAGTATCAAAGTTAGCTGGCTGCC...TACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp ATTTTGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGGATAGGATCAGAGAGTTTACATAATGGGAACTaGACTCTAACCTCTCAATGG +
Preference number: 5 (lower is better)
Translates to: ILSGCSTFRVLKRIGSESLHNGN*TLTSQW
Trigger: CCATTGAGAGGTTAGAGTCAAGTTCCCATTATGTAA...ACTCTCTGATCCTATCCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAGTTGAGATCCATGATTaGATGAGTAAGCCTATCACC +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEVEIHD*MSKPIT
Trigger: GGTGATAGGCTTACTCATCAAATCATGGATCTCAAC...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATGTGGTCATTAGCCATTTaGTCAGGGTGTTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: NFINKINRHASVCFIRCMWSLAI*SGCSTF
Trigger: GAAAGTGGAACACCCTGACAAAATGGCTAATGACCA...CATACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp AGAACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATTGAGCCACCATACCTaGGTCATTAGCCATTTTGTC +
Preference number: 5 (lower is better)
Translates to: RTSLTRLIVTPVSASSGVLSHHT*VISHFV
Trigger: GACAAAATGGCTAATGACCAAGGTATGGTGGCTCAA...TACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATTCCAAACTTGCCATTaGTTCACTCAGATCATCCTG +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEFQTCH*FTQIIL
Trigger: CAGGATGATCTGAGTGAACAAATGGCAAGTTTGGAA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGAGTGAAGCTTTGAAATaGTATCACAGTGTGGTATGG +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQSEALK*YHSVVW
Trigger: CCATACCACACTGTGATACAATTTCAAAGCTTCACT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAGGCCTTAGTGAAGCTTaGAAATTGTATCACAGTGTG +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQGLSEA*KLYHSV
Trigger: CACACTGTGATACAATTTCAAAGCTTCACTAAGGCC...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATTCACAGGTTTCTTCTaGTCAAGAGATCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQFTGFF*SRDQET
Trigger: AGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAAGTCAGAGGCTAGTTaGCAGTATTCACAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQKSEAS*QYSQVS
Trigger: AGAAACCTGTGAATACTGCAAACTAGCCTCTGACTT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAAGTCAGAGGCTAGTTaGCAGTATTCACAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEKSEAS*QYSQVS
Trigger: AGAAACCTGTGAATACTGCAAACTAGCCTCTGACTT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAATGCAGAGTTTTGCTCTaGCTCTTCTACCAACAACAA +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWECRVLL*LFYQQQ
Trigger: TTGTTGTTGGTAGAAGAGCAAGAGCAAAACTCTGCA...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp AGTTCTTGGACACAGGTGTGCTGTTTATGGGTAATTGGTATGCTGCAAAGTTCCAACAATCTGTTTGAGTaGCAAAGCCCTTTGAATGAG +
Preference number: 5 (lower is better)
Translates to: SSWTQVCCLWVIGMLQSSNNLFE*QSPLNE
Trigger: CTCATTCAAAGGGCTTTGCAACTCAAACAGATTGTT...GGAACTTTGCAGCATACCAATTACCCATAAACAGCACACCTGTGTCCAAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS TCA 90 bp ACTGGTGAAAGGAACTTTGTAGCTGTGAAGTTAAGGATCTTGAGATaGGTAGAATATCCTGGATTATCTGGGTGGCCTCAATGTAAACAC +
Preference number: 5 (lower is better)
Translates to: TGERNFVAVKLRILR*VEYPGLSGWPQCKH
Trigger: GTGTTTACATTGAGGCCACCCAGATAATCCAGGATATTCTACTCATCTCAAGATCCTTAACTTCACAGCTACAAAGTTCCTTTCACCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS CCA 90 bp GATAGCCAGAAACACAACATTCCAGGACAGCATCTTTTCCTTCAATaGCTACTACATTGGATGGTCTTTGCAGAAAATACAGCTGTCTAT +
Preference number: 5 (lower is better)
Translates to: DSQKHNIPGQHLFLQ*LLHWMVFAENTAVY
Trigger: ATAGACAGCTGTATTTTCTGCAAAGACCATCCAATGTAGTAGCCATTGAAGGAAAAGATGCTGTCCTGGAATGTTGTGTTTCTGGCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCATACATTGGATGGTCTTaGCAGAAAATACAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSYIGWS*QKIQLS
Trigger: AGACAGCTGTATTTTCTGCAAAGACCATCCAATGTA...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATCACCACTGATTGTTTCCATAATCCAGTCATCAATTGGGATGTTCTTGTCCAAGAACAATCTGTAACCTaGGACTGGACCGTTTGCATA +
Preference number: 5 (lower is better)
Translates to: ITTDCFHNPVINWDVLVQEQSVT*DWTVCI
Trigger: TATGCAAACGGTCCAGTCCAAGGTTACAGATTGTTC...TTGGACAAGAACATCCCAATTGATGACTGGATTATGGAAACAATCAGTGGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAATTACATAATGGGAACTaGACTCTAACCTCTCAATGG +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQLHNGN*TLTSQW
Trigger: CCATTGAGAGGTTAGAGTCAAGTTCCCATTATGTAA...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGTTGTGTCTTCTGACTaGTATTTTGCACTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSVVSSD*YFALAE
Trigger: TTCTGCAAGTGCAAAATACAAGTCAGAAGACACAAC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGATTAAACAACAGGCCTaGACAAAGGAAAACATAGGT +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQIKQQA*TKENIG
Trigger: ACCTATGTTTTCCTTTGTCAAGGCCTGTTGTTTAAT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ATGAGCATAAAGAGTCCTGGATACCATGAACTAGACTCAGTAGGAGGAAGTCAGACATATATGAATCATTaGAGGGTAAAGGGAACAGAG +
Preference number: 5 (lower is better)
Translates to: MSIKSPGYHELDSVGGSQTYMNH*RVKGTE
Trigger: CTCTGTTCCCTTTACCCTCAAATGATTCATATATGT...CTGACTTCCTCCTACTGAGTCTAGTTCATGGTATCCAGGACTCTTTATGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTTTGCCTGGACTGGACATCTCTTCATACTCAGCAATGGACAATTCATTTCCAAAAATCTTGCAGAGTTTaGCTCTTGCTCTTCTACCAA +
Preference number: 5 (lower is better)
Translates to: LCLDWTSLHTQQWTIHFQKSCRV*LLLFYQ
Trigger: TTGGTAGAAGAGCAAGAGCAAAACTCTGCAAGATTT...TTGGAAATGAATTGTCCATTGCTGAGTATGAAGAGATGTCCAGTCCAGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp ACTGCAGTGACAAAGGCCCATGACTATTCTAGCAGCTTAAACTTTGACATTGCAAAATCTTGCAGAGTTTaGCTCTTGCTCTTCTACCAA +
Preference number: 5 (lower is better)
Translates to: TAVTKAHDYSSSLNFDIAKSCRV*LLLFYQ
Trigger: TTGGTAGAAGAGCAAGAGCAAAACTCTGCAAGATTT...TGCAATGTCAAAGTTTAAGCTGCTAGAATAGTCATGGGCCTTTGTCACTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAAACAATCTGTTTGAGTaGCAAAGCCCTTTGAATGAG +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWENNLFE*QSPLNE
Trigger: CTCATTCAAAGGGCTTTGCAACTCAAACAGATTGTT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CCA 90 bp CTGTACATTCAAACTCAATATCCATGCTTTCATAGGCATACAGGTTaGAAGGATGATTTAAAAACCATGGCGGAACAGCAAAGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: LYIQTQYPCFHRHTG*KDDLKTMAEQQSWL
Trigger: AAGCCAACTTTGCTGTTCCGCCATGGTTTTTAAATCATCCTTCCAACCTGTATGCCTATGAAAGCATGGATATTGAGTTTGAATGTACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578949.1
CDS CCA 90 bp CTGTACATTCAAACTCAATATCCATGCTTTCATAGGCATACAGGTTaGAAGGATGATTTAAAAACCATGGCGGAACTTCAAGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LYIQTQYPCFHRHTG*KDDLKTMAELQASG
Trigger: TCCTGAAGCTTGAAGTTCCGCCATGGTTTTTAAATCATCCTTCCAACCTGTATGCCTATGAAAGCATGGATATTGAGTTTGAATGTACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580146.1
CDS CCA 90 bp CTGTACATTCAAACTCAATATCCATGCTTTCATAGGCATACAGGTTaGAAGGATGATTTAAAAACCATGGCGGAACTGGTGAAAGGAACT +
Preference number: 5 (lower is better)
Translates to: LYIQTQYPCFHRHTG*KDDLKTMAELVKGT
Trigger: AGTTCCTTTCACCAGTTCCGCCATGGTTTTTAAATCATCCTTCCAACCTGTATGCCTATGAAAGCATGGATATTGAGTTTGAATGTACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS-3UTR CAA 90 bp ATCACCACTGATTGTTTCCATAATCCAGTCATCAATTGGGATGTTCTTGTCCAAGTTGAGATCCATGATTaGATGAGTAAGCCTATCACC +
Preference number: 5 (lower is better)
Translates to: ITTDCFHNPVINWDVLVQVEIHD*MSKPIT
Trigger: GGTGATAGGCTTACTCATCAAATCATGGATCTCAAC...TTGGACAAGAACATCCCAATTGATGACTGGATTATGGAAACAATCAGTGGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGTTGTGGTGACATCATaGTATATTAATACTACCAGG +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSVVVTS*YINTTR
Trigger: CCTGGTAGTATTAATATACAATGATGTCACCACAAC...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp GGAAGTCAGAGGCTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAAAGTTACCTGAAAACTaGGGCAGGCAATTATATACA +
Preference number: 5 (lower is better)
Translates to: GSQRLVCSIHRFLLVKRSKLPEN*GRQLYT
Trigger: TGTATATAATTGCCTGCCCAAGTTTTCAGGTAACTT...TGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAGCCTCTGACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS-3UTR CAA 90 bp CTAGTTTGCAGTATTCACAGGTTTCTTCTTGTCAAGAGATCAGGAGACTGGGAAATGACTGGTTTCTTATaGGCTATGATTCACTACGAA +
Preference number: 5 (lower is better)
Translates to: LVCSIHRFLLVKRSGDWEMTGFL*AMIHYE
Trigger: TTCGTAGTGAATCATAGCCAATAAGAAACCAGTCAT...TTCCCAGTCTCCTGATCTCTTGACAAGAAGAAACCTGTGAATACTGCAAACTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS TCA 90 bp TTCAGGCTTGCCAGTTTGTGTTCACAGATTGCAAAGGCAGATATCTaGTCCAAGATTACAATATGTATGTCTCAGGATTTGTTGCCTATT +
Preference number: 5 (lower is better)
Translates to: FRLASLCSQIAKADI*SKITICMSQDLLPI
Trigger: AATAGGCAACAAATCCTGAGACATACATATTGTAATCTTGGATCAGATATCTGCCTTTGCAATCTGTGAACACAAACTGGCAAGCCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579666.1
CDS-3UTR CAA 90 bp AACTTCATTAACAAGATTAATCGTCACGCCAGTGTCTGCTTCATCAGGTGTATGTGTAACTTAGAGATGTaGTGTCTTCTGACGGTTATA +
Preference number: 5 (lower is better)
Translates to: NFINKINRHASVCFIRCMCNLEM*CLLTVI
Trigger: TATAACCGTCAGAAGACACAACATCTCTAAGTTACA...CATACACCTGATGAAGCAGACACTGGCGTGACGATTAATCTTGTTAATGAAGTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304775.12
CDS GCA 90 bp CTTTTTGAAAACTTAATTCAGGCTTGCCAGTTTGTGTTCACAGATTaGAAAGGCAGATATCTGATCCAAGATTACAATATGTATGTCTCA +
Preference number: 5 (lower is better)
Translates to: LFENLIQACQFVFTD*KGRYLIQDYNMYVS
Trigger: TGAGACATACATATTGTAATCTTGGATCAGATATCTGCCTTTGCAATCTGTGAACACAAACTGGCAAGCCTGAATTAAGTTTTCAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579666.1
CDS GCA 72 bp GCCAGGGGTCGCGGGCAGCGGCAGCACTCACACACATaGACTCACACACGCATGCACACATGCACACACACG +
Preference number: 6 (lower is better)
Translates to: ARGRGQRQHSHT*THTRMHTCTHT
Trigger: CGTGTGTGTGCATGTGTGCATGCGTGTGTGAGTGCATGTGTGTGAGTGCTGCCGCTGCCCGCGACCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS GCA 72 bp GAGAGTGTTGGGAATGGCACAGGCCGGAGAGTGAACTaGGGGTGGGGATATCCACAGGTGGGAGACGGGAGG +
Preference number: 6 (lower is better)
Translates to: ESVGNGTGRRVN*GWGYPQVGDGR
Trigger: CCTCCCGTCTCCCACCTGTGGATATCCCCACCCGCAGTTCACTCTCCGGCCTGTGCCATTCCCAACACTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp ACCGGGATGGCGCTCACGACAGCAGGATTGTTGGACTaGGCATCCATGGGAATCATGAGCTTGGCCCGGGGG +
Preference number: 6 (lower is better)
Translates to: TGMALTTAGLLD*ASMGIMSLARG
Trigger: CCCCCGGGCCAAGCTCATGATTCCCATGGATGCCCAGTCCAACAATCCTGCTGTCGTGAGCGCCATCCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 90 bp AGGTGGGAGACGGGAGGATTCCTGGGTACTGGGCACTTTCTAGCGTaGGCACCGGGATGGCGCTCACGACAGCAGGATTGTTGGACTGGG +
Preference number: 6 (lower is better)
Translates to: RWETGGFLGTGHFLA*APGWRSRQQDCWTG
Trigger: CCCAGTCCAACAATCCTGCTGTCGTGAGCGCCATCCCGGTGCCAACGCTAGAAAGTGCCCAGTACCCAGGAATCCTCCCGTCTCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS GCA 72 bp GGATCCAAAGATCAGGGGGTCGGAGGTCCTTCTGGCTaGCCTTCCTTTTGCCAGCACTGTGGGTGGCCCGTT +
Preference number: 6 (lower is better)
Translates to: GSKDQGVGGPSG*PSFCQHCGWPV
Trigger: AACGGGCCACCCACAGTGCTGGCAAAAGGAAGGGCAGCCAGAAGGACCTCCGACCCCCTGATCTTTGGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp TATCCACAGGTGGGAGACGGGAGGATTCCTGGGTACTaGGCACTTTCTAGCGTTGGCACCGGGATGGCGCTC +
Preference number: 6 (lower is better)
Translates to: YPQVGDGRIPGY*ALSSVGTGMAL
Trigger: GAGCGCCATCCCGGTGCCAACGCTAGAAAGTGCCCAGTACCCAGGAATCCTCCCGTCTCCCACCTGTGGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp GTTGGGAATGGCACAGGCCGGAGAGTGAACTGCGGGTaGGGATATCCACAGGTGGGAGACGGGAGGATTCCT +
Preference number: 6 (lower is better)
Translates to: VGNGTGRRVNCG*GYPQVGDGRIP
Trigger: AGGAATCCTCCCGTCTCCCACCTGTGGATATCCCCACCCGCAGTTCACTCTCCGGCCTGTGCCATTCCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 72 bp TCAGGGGGTCGGAGGTCCTTCTGGCTGCCCTTCCTTTaGCCAGCACTGTGGGTGGCCCGTTTCTTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: SGGRRSFWLPFL*PALWVARFFLC
Trigger: GCAGAGAAAGAAACGGGCCACCCACAGTGCTGGCAAAAGGAAGGGCAGCCAGAAGGACCTCCGACCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp CTGGGTACTGGGCACTTTCTAGCGTTGGCACCGGGATaGCGCTCACGACAGCAGGATTGTTGGACTGGGCAT +
Preference number: 6 (lower is better)
Translates to: LGTGHFLALAPG*RSRQQDCWTGH
Trigger: ATGCCCAGTCCAACAATCCTGCTGTCGTGAGCGCCATCCCGGTGCCAACGCTAGAAAGTGCCCAGTACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 72 bp ACGGGAGGATTCCTGGGTACTGGGCACTTTCTAGCGTaGGCACCGGGATGGCGCTCACGACAGCAGGATTGT +
Preference number: 6 (lower is better)
Translates to: TGGFLGTGHFLA*APGWRSRQQDC
Trigger: ACAATCCTGCTGTCGTGAGCGCCATCCCGGTGCCAACGCTAGAAAGTGCCCAGTACCCAGGAATCCTCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 72 bp CGGAGCAGTCGAGGAGGACATTTCCTCCCCGCATTGTaGCGGCATCAGAAGGTTCTGAGAGGAAGCGCAGTG +
Preference number: 6 (lower is better)
Translates to: RSSRGGHFLPAL*RHQKVLRGSAV
Trigger: CACTGCGCTTCCTCTCAGAACCTTCTGATGCCGTCACAATGCGGGGAGGAAATGTCCTCCTCGACTGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000578080.1
CDS CCA 72 bp CCACAGCCTGTACACCTACTGGTGGGAGCATGGGGGTaGAGAGATCTGGGACCGAGGTGGGGAAATCATCAA +
Preference number: 6 (lower is better)
Translates to: PQPVHLLVGAWG*RDLGPRWGNHQ
Trigger: TTGATGATTTCCCCACCTCGGTCCCAGATCTCTCCACCCCCATGCTCCCACCAGTAGGTGTACAGGCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CCA 72 bp TGGCTGTGGCTGACTGGTGTGAGGTCTTGGCAACTTTaGATGGGAGAGTCCCTTCCTGCAGGGTCAGTGCCA +
Preference number: 6 (lower is better)
Translates to: WLWLTGVRSWQL*MGESLPAGSVP
Trigger: TGGCACTGACCCTGCAGGAAGGGACTCTCCCATCCAAAGTTGCCAAGACCTCACACCAGTCAGCCACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp TGGTGCCTCCTCGCTGCTAGAATGCTCAGGCTGAGATaGGGGCAGCATAGGTGGTTGTTGGGTAGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: WCLLAARMLRLR*GQHRWLLGSWS
Trigger: GGACCAACTACCCAACAACCACCTATGCTGCCCCCATCTCAGCCTGAGCATTCTAGCAGCGAGGAGGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 72 bp GAATGTTCCCTTTCGCTTCTGCAGGTGGGCGCCAGCTaGGACGGACAAATCGGCTGGAAACCAAGACAGGGA +
Preference number: 6 (lower is better)
Translates to: ECSLSLLQVGAS*DGQIGWKPRQG
Trigger: TCCCTGTCTTGGTTTCCAGCCGATTTGTCCGTCTCAGCTGGCGCCCACCTGCAGAAGCGAAAGGGAACATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 72 bp GCCCTGGAACTTGCAACTCAGGCTGTGTGGCCACCTTaGTGGGTTGAGAACTCTCTCCCGGTCCCCATTCAT +
Preference number: 6 (lower is better)
Translates to: ALELATQAVWPP*WVENSLPVPIH
Trigger: ATGAATGGGGACCGGGAGAGAGTTCTCAACCCATCAAGGTGGCCACACAGCCTGAGTTGCAAGTTCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 72 bp CTGCTTGGTGCCTCCTCGCTGCTAGAATGCTCAGGCTaGGATGGGGGCAGCATAGGTGGTTGTTGGGTAGTT +
Preference number: 6 (lower is better)
Translates to: LLGASSLLECSG*DGGSIGGCWVV
Trigger: AACTACCCAACAACCACCTATGCTGCCCCCATCTCAGCCTGAGCATTCTAGCAGCGAGGAGGCACCAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS GCA 72 bp TGGTCGAACACAAGCTGTGGGGATGGTTCTGCTTGGTaGCTCCTCGCTGCTAGAATGCTCAGGCTGAGATGG +
Preference number: 6 (lower is better)
Translates to: WSNTSCGDGSAW*LLAARMLRLRW
Trigger: CCATCTCAGCCTGAGCATTCTAGCAGCGAGGAGGCACCAAGCAGAACCATCCCCACAGCTTGTGTTCGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000579702.1
ENST00000581580.5
CDS CCA 72 bp GGCCAGATGAATGCCATCTTTCTTCCACTTGATCACTaGAACTCCTCGGTCGGACTCCGCGGAGCAGTCGAG +
Preference number: 6 (lower is better)
Translates to: GQMNAIFLPLDH*NSSVGLRGAVE
Trigger: CTCGACTGCTCCGCGGAGTCCGACCGAGGAGTTCCAGTGATCAAGTGGAAGAAAGATGGCATTCATCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000578080.1
CDS CCA 72 bp ACAGAGTTGTCTGCCCAGCTGACCCTCACAGCATCATaGGTAAGAGCCACAGCCTGTACACCTACTGGTGGG +
Preference number: 6 (lower is better)
Translates to: TELSAQLTLTAS*VRATACTPTGG
Trigger: CCCACCAGTAGGTGTACAGGCTGTGGCTCTTACCCATGATGCTGTGAGGGTCAGCTGGGCAGACAACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp GTTTCTGACTGGCTGTGGCTGACTGGTGTGAGGTCTTaGCAACTTTGGATGGGAGAGTCCCTTCCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: VSDWLWLTGVRS*QLWMGESLPAG
Trigger: CCCTGCAGGAAGGGACTCTCCCATCCAAAGTTGCCAAGACCTCACACCAGTCAGCCACAGCCAGTCAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 90 bp TGGCCCTGGAACTTGCAACTCAGGCTGTGTGGCCACCTTGATGGGTaGAGAACTCTCTCCCGGTCCCCATTCATTGTAAGCCACAACTCG +
Preference number: 6 (lower is better)
Translates to: WPWNLQLRLCGHLDG*RTLSRSPFIVSHNS
Trigger: CGAGTTGTGGCTTACAATGAATGGGGACCGGGAGAGAGTTCTCAACCCATCAAGGTGGCCACACAGCCTGAGTTGCAAGTTCCAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 72 bp TTCCCAAGGCCAGATGAATGCCATCTTTCTTCCACTTaGTCACTGGAACTCCTCGGTCGGACTCCGCGGAGC +
Preference number: 6 (lower is better)
Translates to: FPRPDECHLSST*SLELLGRTPRS
Trigger: GCTCCGCGGAGTCCGACCGAGGAGTTCCAGTGATCAAGTGGAAGAAAGATGGCATTCATCTGGCCTTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000578080.1
CDS TCA 72 bp ACTCACTGTTCTTCCTGCTCCGAAACCTCGGTCCACTaGGAGTGTTGGGAATGGCACAGGCCGGAGAGTGAA +
Preference number: 6 (lower is better)
Translates to: THCSSCSETSVH*ECWEWHRPESE
Trigger: TTCACTCTCCGGCCTGTGCCATTCCCAACACTCTCAGTGGACCGAGGTTTCGGAGCAGGAAGAACAGTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS GCA 72 bp CAAGAGGAGATGGAAGGCAATCCTGTGGCCGGGCTGTaGATTAAAAGGTTGAGGCTGGTTCCTTGTCGTCGG +
Preference number: 6 (lower is better)
Translates to: QEEMEGNPVAGL*IKRLRLVPCRR
Trigger: CCGACGACAAGGAACCAGCCTCAACCTTTTAATGCACAGCCCGGCCACAGGATTGCCTTCCATCTCCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS CCA 72 bp AGTTGGTCGAACACAAGCTGTGGGGATGGTTCTGCTTaGTGCCTCCTCGCTGCTAGAATGCTCAGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SWSNTSCGDGSA*CLLAARMLRLR
Trigger: TCTCAGCCTGAGCATTCTAGCAGCGAGGAGGCACCAAGCAGAACCATCCCCACAGCTTGTGTTCGACCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000579702.1
ENST00000581580.5
CDS CCA 72 bp ACCCCAGGTCAGAGAATAAAAGGCTTGCTGCCATCTTaGGAGTGGCCTGCCGCCATCTTGGGAGCTCTAAGA +
Preference number: 6 (lower is better)
Translates to: TPGQRIKGLLPS*EWPAAILGALR
Trigger: TCTTAGAGCTCCCAAGATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCCTTTTATTCTCTGACCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS CAA 72 bp CCACCGGACGGTGTAAAGTCGCACCTCAGACGTCTTTaGGTTCTTAGGGACAGAGTTGTCTGCCCAGCTGAC +
Preference number: 6 (lower is better)
Translates to: PPDGVKSHLRRL*VLRDRVVCPAD
Trigger: GTCAGCTGGGCAGACAACTCTGTCCCTAAGAACCAAAAGACGTCTGAGGTGCGACTTTACACCGTCCGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 72 bp AACCCCAGGTCAGAGAATAAAAGGCTTGCTGCCATCTaGGGAGTGGCCTGCCGCCATCTTGGGAGCTCTAAG +
Preference number: 6 (lower is better)
Translates to: NPRSENKRLAAI*GVACRHLGSSK
Trigger: CTTAGAGCTCCCAAGATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCCTTTTATTCTCTGACCTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS CAA 90 bp GCCGGGCTGTGCATTAAAAGGTTGAGGCTGGTTCCTTGTCGTCGGTaGGGTAAAGTTGAAGAGACAATTCCGCGCGAGAGCTGGAGATGC +
Preference number: 6 (lower is better)
Translates to: AGLCIKRLRLVPCRR*GKVEETIPRESWRC
Trigger: GCATCTCCAGCTCTCGCGCGGAATTGTCTCTTCAACTTTACCCAACCGACGACAAGGAACCAGCCTCAACCTTTTAATGCACAGCCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS TCA 72 bp GGAGGTAGCAAAGGATTAGCAAAGCTGCGGAGTGGGTaGGTTGGTCGAACACAAGCTGTGGGGATGGTTCTG +
Preference number: 6 (lower is better)
Translates to: GGSKGLAKLRSG*VGRTQAVGMVL
Trigger: CAGAACCATCCCCACAGCTTGTGTTCGACCAACTCACCCACTCCGCAGCTTTGCTAATCCTTTGCTACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000579702.1
ENST00000581580.5
CDS CCA 72 bp CGTGAAAGTTTGAATGTTCCCTTTCGCTTCTGCAGGTaGGCGCCAGCTGAGACGGACAAATCGGCTGGAAAC +
Preference number: 6 (lower is better)
Translates to: RESLNVPFRFCR*APAETDKSAGN
Trigger: GTTTCCAGCCGATTTGTCCGTCTCAGCTGGCGCCCACCTGCAGAAGCGAAAGGGAACATTCAAACTTTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp TACACCTACTGGTGGGAGCATGGGGGTGGAGAGATCTaGGACCGAGGTGGGGAAATCATCAAGCAAAGGATA +
Preference number: 6 (lower is better)
Translates to: YTYWWEHGGGEI*DRGGEIIKQRI
Trigger: TATCCTTTGCTTGATGATTTCCCCACCTCGGTCCCAGATCTCTCCACCCCCATGCTCCCACCAGTAGGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CAA 72 bp TCCTGTGGACACCTCAGTGCAGAACAATCTGTAACCTaGGACTGGACCGTTTGCATAGGCAGGGGGTTCCCA +
Preference number: 6 (lower is better)
Translates to: SCGHLSAEQSVT*DWTVCIGRGFP
Trigger: TGGGAACCCCCTGCCTATGCAAACGGTCCAGTCCAAGGTTACAGATTGTTCTGCACTGAGGTGTCCACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 72 bp ATGCTCAGGCTGAGATGGGGGCAGCATAGGTGGTTGTaGGGTAGTTGGTCCTTCACTCACTGTTCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: MLRLRWGQHRWL*GSWSFTHCSSC
Trigger: GCAGGAAGAACAGTGAGTGAAGGACCAACTACCCAACAACCACCTATGCTGCCCCCATCTCAGCCTGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS CAA 72 bp CACTCCATCTCCACATTGGCTGAATCCTCTGTTGGTTaGTGGCTCTCCTCAGACACTTCAGGGGCTGTTGGC +
Preference number: 6 (lower is better)
Translates to: HSISTLAESSVG*WLSSDTSGAVG
Trigger: GCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTGGAGATGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS GCA 72 bp AAAGACCGTGAAAGTTTGAATGTTCCCTTTCGCTTCTaGAGGTGGGCGCCAGCTGAGACGGACAAATCGGCT +
Preference number: 6 (lower is better)
Translates to: KDRESLNVPFRF*RWAPAETDKSA
Trigger: AGCCGATTTGTCCGTCTCAGCTGGCGCCCACCTGCAGAAGCGAAAGGGAACATTCAAACTTTCACGGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS GCA 72 bp GAGAATAAAAGGCTTGCTGCCATCTTGGGAGTGGCCTaGCGCCATCTTGGGAGCTCTAAGAACAAAGACCTG +
Preference number: 6 (lower is better)
Translates to: ENKRLAAILGVA*RHLGSSKNKDL
Trigger: CAGGTCTTTGTTCTTAGAGCTCCCAAGATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCCTTTTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS CCA 72 bp GGACACCTCAGTGCAGAACAATCTGTAACCTTGGACTaGACCGTTTGCATAGGCAGGGGGTTCCCAGGTAAT +
Preference number: 6 (lower is better)
Translates to: GHLSAEQSVTLD*TVCIGRGFPGN
Trigger: ATTACCTGGGAACCCCCTGCCTATGCAAACGGTCCAGTCCAAGGTTACAGATTGTTCTGCACTGAGGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp GGTCAGAGAATAAAAGGCTTGCTGCCATCTTGGGAGTaGCCTGCCGCCATCTTGGGAGCTCTAAGAACAAAG +
Preference number: 6 (lower is better)
Translates to: GQRIKGLLPSWE*PAAILGALRTK
Trigger: CTTTGTTCTTAGAGCTCCCAAGATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCCTTTTATTCTCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS CCA 72 bp GATGCCCTTACATTGGCTGAATCCTCTGTTGGTTTGTaGCTCTCCTCAGACACTTCAGGGGCTGTTGGCACA +
Preference number: 6 (lower is better)
Translates to: DALTLAESSVGL*LSSDTSGAVGT
Trigger: TGTGCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTAAGGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579702.1
CDS CCA 72 bp GCTAGAATGCTCAGGCTGAGATGGGGGCAGCATAGGTaGTTGTTGGGTAGTTGGTCCTTCACTCACTGTTCT +
Preference number: 6 (lower is better)
Translates to: ARMLRLRWGQHR*LLGSWSFTHCS
Trigger: AGAACAGTGAGTGAAGGACCAACTACCCAACAACCACCTATGCTGCCCCCATCTCAGCCTGAGCATTCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS CCA 72 bp TCCATCTCCACATTGGCTGAATCCTCTGTTGGTTTGTaGCTCTCCTCAGACACTTCAGGGGCTGTTGGCACA +
Preference number: 6 (lower is better)
Translates to: SISTLAESSVGL*LSSDTSGAVGT
Trigger: TGTGCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTGGAGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS CAA 72 bp AACTTGCAACTCAGGCTGTGTGGCCACCTTGATGGGTaGAGAACTCTCTCCCGGTCCCCATTCATTGTAAGC +
Preference number: 6 (lower is better)
Translates to: NLQLRLCGHLDG*RTLSRSPFIVS
Trigger: GCTTACAATGAATGGGGACCGGGAGAGAGTTCTCAACCCATCAAGGTGGCCACACAGCCTGAGTTGCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 72 bp CTTCCTTTCTCCAGTCCTGTGAATAGGTACCAGAGGTaGTTTGGCTCCAGTGTTTCCATCTCACCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: LPFSSPVNRYQR*FGSSVSISPLR
Trigger: CCGCAGGGGTGAGATGGAAACACTGGAGCCAAACAACCTCTGGTACCTATTCACAGGACTGGAGAAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 72 bp GAAGGCAATCCTGTGGCCGGGCTGTGCATTAAAAGGTaGAGGCTGGTTCCTTGTCGTCGGTTGGGTAAAGTT +
Preference number: 6 (lower is better)
Translates to: EGNPVAGLCIKR*RLVPCRRLGKV
Trigger: AACTTTACCCAACCGACGACAAGGAACCAGCCTCAACCTTTTAATGCACAGCCCGGCCACAGGATTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS CAA 72 bp AGAATGCTCAGGCTGAGATGGGGGCAGCATAGGTGGTaGTTGGGTAGTTGGTCCTTCACTCACTGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: RMLRLRWGQHRW*LGSWSFTHCSS
Trigger: GGAAGAACAGTGAGTGAAGGACCAACTACCCAACAACCACCTATGCTGCCCCCATCTCAGCCTGAGCATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS CAA 90 bp TCGTTCCCTGTTGTCACCTTCTCTGGAGAAAAAGACCGTGAAAGTTaGAATGTTCCCTTTCGCTTCTGCAGGTGGGCGCCAGCTGAGACG +
Preference number: 6 (lower is better)
Translates to: SFPVVTFSGEKDRES*NVPFRFCRWAPAET
Trigger: CGTCTCAGCTGGCGCCCACCTGCAGAAGCGAAAGGGAACATTCAAACTTTCACGGTCTTTTTCTCCAGAGAAGGTGACAACAGGGAACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 90 bp GAGGAGATGGAAGGCAATCCTGTGGCCGGGCTGTGCATTAAAAGGTaGAGGCTGGTTCCTTGTCGTCGGTTGGGTAAAGTTGAAGAGACA +
Preference number: 6 (lower is better)
Translates to: EEMEGNPVAGLCIKR*RLVPCRRLGKVEET
Trigger: TGTCTCTTCAACTTTACCCAACCGACGACAAGGAACCAGCCTCAACCTTTTAATGCACAGCCCGGCCACAGGATTGCCTTCCATCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS CAA 90 bp TGTTTCACCCACTCCATCTCCACATTGGCTGAATCCTCTGTTGGTTaGTGGCTCTCCTCAGACACTTCAGGGGCTGTTGGCACAGACACA +
Preference number: 6 (lower is better)
Translates to: CFTHSISTLAESSVG*WLSSDTSGAVGTDT
Trigger: TGTGTCTGTGCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTGGAGATGGAGTGGGTGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS TCA 72 bp TACATGGCTTCTGGCTTCAGGTTTCCCACAGTGAGCTaGAGGGACCCAGGCTGTGTTGTATTCAATGCTCGT +
Preference number: 6 (lower is better)
Translates to: YMASGFRFPTVS*RDPGCVVFNAR
Trigger: ACGAGCATTGAATACAACACAGCCTGGGTCCCTTCAGCTCACTGTGGGAAACCTGAAGCCAGAAGCCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 72 bp AGGTGTACATGGCTTCTGGCTTCAGGTTTCCCACAGTaGGCTGAAGGGACCCAGGCTGTGTTGTATTCAATG +
Preference number: 6 (lower is better)
Translates to: RCTWLLASGFPQ*AEGTQAVLYSM
Trigger: CATTGAATACAACACAGCCTGGGTCCCTTCAGCTCACTGTGGGAAACCTGAAGCCAGAAGCCATGTACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp GTGGGAGCATGGGGGTGGAGAGATCTGGGACCGAGGTaGGGAAATCATCAAGCAAAGGATAATAATCAACTG +
Preference number: 6 (lower is better)
Translates to: VGAWGWRDLGPR*GNHQAKDNNQL
Trigger: CAGTTGATTATTATCCTTTGCTTGATGATTTCCCCACCTCGGTCCCAGATCTCTCCACCCCCATGCTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CCA 72 bp TTGGGTAAAGTTGAAGAGACAATTCCGCGCGAGAGCTaGAGATGCTGTTGGTTTTTCTTCCGAGAGCCGAGG +
Preference number: 6 (lower is better)
Translates to: LGKVEETIPRES*RCCWFFFREPR
Trigger: CCTCGGCTCTCGGAAGAAAAACCAACAGCATCTCCAGCTCTCGCGCGGAATTGTCTCTTCAACTTTACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS CCA 72 bp GGTGGCCTCAATGTAAACACAAGGATCCAGCAAAGTTaGCTTCTAGTAAGGGTCCTCTCCCTGGCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: GGLNVNTRIQQS*LLVRVLSLASR
Trigger: TCTGGAAGCCAGGGAGAGGACCCTTACTAGAAGCCAACTTTGCTGGATCCTTGTGTTTACATTGAGGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS CAA 72 bp TCCTGTTCATACACATTGGCTGAATCCTCTGTTGGTTaGTGGCTCTCCTCAGACACTTCAGGGGCTGTTGGC +
Preference number: 6 (lower is better)
Translates to: SCSYTLAESSVG*WLSSDTSGAVG
Trigger: GCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTGTATGAACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CAA 72 bp AAAGATGCCCTTACATTGGCTGAATCCTCTGTTGGTTaGTGGCTCTCCTCAGACACTTCAGGGGCTGTTGGC +
Preference number: 6 (lower is better)
Translates to: KDALTLAESSVG*WLSSDTSGAVG
Trigger: GCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTAAGGGCATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579702.1
CDS CAA 90 bp CTGTTCTTTTCCTGTGGACACCTCAGTGCAGAACAATCTGTAACCTaGGACTGGACCGTTTGCATAGGCAGGGGGTTCCCAGGTAATAAG +
Preference number: 6 (lower is better)
Translates to: LFFSCGHLSAEQSVT*DWTVCIGRGFPGNK
Trigger: CTTATTACCTGGGAACCCCCTGCCTATGCAAACGGTCCAGTCCAAGGTTACAGATTGTTCTGCACTGAGGTGTCCACAGGAAAAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 90 bp CTCAGATCATCCTGTTCATACACATTGGCTGAATCCTCTGTTGGTTaGTGGCTCTCCTCAGACACTTCAGGGGCTGTTGGCACAGACACA +
Preference number: 6 (lower is better)
Translates to: LRSSCSYTLAESSVG*WLSSDTSGAVGTDT
Trigger: TGTGTCTGTGCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTGTATGAACAGGATGATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CAA 90 bp AGAATAAAAGGCTTGCTGCCATCTTGGGAGTGGCCTGCCGCCATCTaGGGAGCTCTAAGAACAAAGACCTGCTACTGCAACTTTTGCTGT +
Preference number: 6 (lower is better)
Translates to: RIKGLLPSWEWPAAI*GALRTKTCYCNFCC
Trigger: ACAGCAAAAGTTGCAGTAGCAGGTCTTTGTTCTTAGAGCTCCCAAGATGGCGGCAGGCCACTCCCAAGATGGCAGCAAGCCTTTTATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579349.1
CDS CAA 90 bp GGATTATCTGGGTGGCCTCAATGTAAACACAAGGATCCAGCAAAGTaGGCTTCTAGTAAGGGTCCTCTCCCTGGCTTCCAGACAACACCT +
Preference number: 6 (lower is better)
Translates to: GLSGWPQCKHKDPAK*ASSKGPLPGFQTTP
Trigger: AGGTGTTGTCTGGAAGCCAGGGAGAGGACCCTTACTAGAAGCCAACTTTGCTGGATCCTTGTGTTTACATTGAGGCCACCCAGATAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS TCA 72 bp GTTGGAAGGTGGTCCAGTACCATTGACTGTCATGGCTaGCACCTGGAAACTGTACTGACTTCCTTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: VGRWSSTIDCHG*HLETVLTSFLQ
Trigger: CTGGAGAAAGGAAGTCAGTACAGTTTCCAGGTGTCAGCCATGACAGTCAATGGTACTGGACCACCTTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS TCA 72 bp CTGCAGTATACCAGTTGGAAGGTGGTCCAGTACCATTaGCTGTCATGGCTGACACCTGGAAACTGTACTGAC +
Preference number: 6 (lower is better)
Translates to: LQYTSWKVVQYH*LSWLTPGNCTD
Trigger: GTCAGTACAGTTTCCAGGTGTCAGCCATGACAGTCAATGGTACTGGACCACCTTCCAACTGGTATACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS GCA 72 bp TTGACTCTAACCTCTCAATGGAATAATATCGCTGCTTaGTGTCCACACGCACTGTCTCAGCGTAAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: LTLTSQWNNIAA*CPHALSQRKGS
Trigger: GGAGCCCTTACGCTGAGACAGTGCGTGTGGACAGCAAGCAGCGATATTATTCCATTGAGAGGTTAGAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp GGTCTTAGGAAGAGTGGGCCCTGGCTGAGACAAAAGTaGTGTGTAAGGGACTTTCGGTTCTATTGCACTCAT +
Preference number: 6 (lower is better)
Translates to: GLRKSGPWLRQK*CVRDFRFYCTH
Trigger: ATGAGTGCAATAGAACCGAAAGTCCCTTACACACCACTTTTGTCTCAGCCAGGGCCCACTCTTCCTAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000579702.1
ENST00000581580.5
CDS CCA 72 bp TGTTCATACACATTGGCTGAATCCTCTGTTGGTTTGTaGCTCTCCTCAGACACTTCAGGGGCTGTTGGCACA +
Preference number: 6 (lower is better)
Translates to: CSYTLAESSVGL*LSSDTSGAVGT
Trigger: TGTGCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTGTATGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CAA 72 bp GTTGTCACCTTCTCTGGAGAAAAAGACCGTGAAAGTTaGAATGTTCCCTTTCGCTTCTGCAGGTGGGCGCCA +
Preference number: 6 (lower is better)
Translates to: VVTFSGEKDRES*NVPFRFCRWAP
Trigger: TGGCGCCCACCTGCAGAAGCGAAAGGGAACATTCAAACTTTCACGGTCTTTTTCTCCAGAGAAGGTGACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 72 bp TGCATTAAAAGGTTGAGGCTGGTTCCTTGTCGTCGGTaGGGTAAAGTTGAAGAGACAATTCCGCGCGAGAGC +
Preference number: 6 (lower is better)
Translates to: CIKRLRLVPCRR*GKVEETIPRES
Trigger: GCTCTCGCGCGGAATTGTCTCTTCAACTTTACCCAACCGACGACAAGGAACCAGCCTCAACCTTTTAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS TCA 72 bp TGTGTCTCCCATGAAGGCTGTGACAGATTCTGTCTGTaGAAGGAACCTCAGTGGTCCTGCTACTGCAACTTT +
Preference number: 6 (lower is better)
Translates to: CVSHEGCDRFCL*KEPQWSCYCNF
Trigger: AAAGTTGCAGTAGCAGGACCACTGAGGTTCCTTTCACAGACAGAATCTGTCACAGCCTTCATGGGAGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
CDS TCA 72 bp TGTGTCTCCCATGAAGGCTGTGACAGATTCTGTCTGTaGAAGGAACCTCAGTGGTCTATATGTTGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: CVSHEGCDRFCL*KEPQWSICCPG
Trigger: ACCTGGGCAACATATAGACCACTGAGGTTCCTTTCACAGACAGAATCTGTCACAGCCTTCATGGGAGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580024.1
CDS GCA 72 bp GAGGTCTTGGCAACTTTGGATGGGAGAGTCCCTTCCTaGAGGGTCAGTGCCAGATGGCTTTTCAATATTTTT +
Preference number: 6 (lower is better)
Translates to: EVLATLDGRVPS*RVSARWLFNIF
Trigger: AAAAATATTGAAAAGCCATCTGGCACTGACCCTGCAGGAAGGGACTCTCCCATCCAAAGTTGCCAAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS GCA 72 bp CTGAGAGGAGTGCCCTGTACATGTTTTGGAAATGATTaGAAGGTCACTCAATCTCAAACGCCTGCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: LRGVPCTCFGND*KVTQSQTPALV
Trigger: GACCAGAGCAGGCGTTTGAGATTGAGTGACCTTGCAATCATTTCCAAAACATGTACAGGGCACTCCTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579666.1
CDS GCA 72 bp ACACCTTCTCTGTTCTCACATGGCCTTTTCTCTCTGTaGAAGGGTGGAGAGAGTGCTCCAGTAACTCTTCTT +
Preference number: 6 (lower is better)
Translates to: TPSLFSHGLFSL*KGGESAPVTLL
Trigger: AAGAAGAGTTACTGGAGCACTCTCTCCACCCTTGCACAGAGAGAAAAGGCCATGTGAGAACAGAGAAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS CCA 72 bp GGTGGGGAAATCATCAAGCAAAGGATAATAATCAACTaGGTCAGTGGGATCGGTTATAGACCTGGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: GGEIIKQRIIIN*VSGIGYRPGGG
Trigger: GCCACCACCAGGTCTATAACCGATCCCACTGACCCAGTTGATTATTATCCTTTGCTTGATGATTTCCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CAA 90 bp GGAAATATAAGTGAGTTTGGGGCCTGGGGACAGCTGCATCGGCTGTaGCAACTCTCTAGCGAGTGTCATCCATCCATATACTTTGAGTTA +
Preference number: 6 (lower is better)
Translates to: GNISEFGAWGQLHRL*QLSSECHPSIYFEL
Trigger: TAACTCAAAGTATATGGATGGATGACACTCGCTAGAGAGTTGCAACAGCCGATGCAGCTGTCCCCAGGCCCCAAACTCACTTATATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS CAA 90 bp AGATGCGCGCTGAACAAGGAAGCTCCGAAGAGTACAAAAGCCAGCTaGGGTACCCAAACACATCTAAGACTATTCTCCATATTTCAGCCA +
Preference number: 6 (lower is better)
Translates to: RCALNKEAPKSTKAS*GTQTHLRLFSIFQP
Trigger: TGGCTGAAATATGGAGAATAGTCTTAGATGTGTTTGGGTACCCAAGCTGGCTTTTGTACTCTTCGGAGCTTCCTTGTTCAGCGCGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS CAA 90 bp ATGAATTTTAAAGATGCCCTTACATTGGCTGAATCCTCTGTTGGTTaGTGGCTCTCCTCAGACACTTCAGGGGCTGTTGGCACAGACACA +
Preference number: 6 (lower is better)
Translates to: MNFKDALTLAESSVG*WLSSDTSGAVGTDT
Trigger: TGTGTCTGTGCCAACAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCCAATGTAAGGGCATCTTTAAAATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579702.1
CDS TCA 72 bp GTTCCCTGTTGTCACCTTCTCTGGAGAAAAAGACCGTaGAAGTTTGAATGTTCCCTTTCGCTTCTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: VPCCHLLWRKRP*KFECSLSLLQV
Trigger: CACCTGCAGAAGCGAAAGGGAACATTCAAACTTTCACGGTCTTTTTCTCCAGAGAAGGTGACAACAGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CCA 72 bp AAGGATGATTTAAAAACCATGGCGGAACAGCAAAGTTaGCTTCTAGTAAGGGTCCTCTCCCTGGCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: KDDLKTMAEQQS*LLVRVLSLASR
Trigger: TCTGGAAGCCAGGGAGAGGACCCTTACTAGAAGCCAACTTTGCTGTTCCGCCATGGTTTTTAAATCATCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578949.1
CDS CAA 72 bp TCTAGATCATTCTCTGGAGTCTCTGCAGTATACCAGTaGGAAGGTGGTCCAGTACCATTGACTGTCATGGCT +
Preference number: 6 (lower is better)
Translates to: SRSFSGVSAVYQ*EGGPVPLTVMA
Trigger: AGCCATGACAGTCAATGGTACTGGACCACCTTCCAACTGGTATACTGCAGAGACTCCAGAGAATGATCTAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000581580.5
CDS CAA 72 bp TTAATCGTCACGCCAGTGTCTTGGTCATTAGCCATTTaGTCAGGGTGTTCCACTTTCAGAGTCCTGAAGAGG +
Preference number: 6 (lower is better)
Translates to: LIVTPVSWSLAI*SGCSTFRVLKR
Trigger: CCTCTTCAGGACTCTGAAAGTGGAACACCCTGACAAAATGGCTAATGACCAAGACACTGGCGTGACGATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579941.1
CDS TCA 72 bp CTCTGCACTGTAACCAAACCTTCCCAAATAGAATTCTaGGCGTATTCAAGGGCCCTGGGATACATTTTCCAG +
Preference number: 6 (lower is better)
Translates to: LCTVTKPSQIEF*AYSRALGYIFQ
Trigger: CTGGAAAATGTATCCCAGGGCCCTTGAATACGCTCAGAATTCTATTTGGGAAGGTTTGGTTACAGTGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578080.1
CDS TCA 72 bp CTCAGACCCTCACTAGGAGAGTGCATGAAGGAGTGGTaGTTCTGCCCAATTGTCCTGTTATTGATGAAAATG +
Preference number: 6 (lower is better)
Translates to: LRPSLGECMKEW*FCPIVLLLMKM
Trigger: CATTTTCATCAATAACAGGACAATTGGGCAGAATCACCACTCCTTCATGCACTCTCCTAGTGAGGGTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582595.1
CDS CAA 72 bp CTGAACAAGGAAGCTCCGAAGAGTACAAAAGCCAGCTaGGGTACCCAAACACATCTAAGACTATTCTCCATA +
Preference number: 6 (lower is better)
Translates to: LNKEAPKSTKAS*GTQTHLRLFSI
Trigger: TATGGAGAATAGTCTTAGATGTGTTTGGGTACCCAAGCTGGCTTTTGTACTCTTCGGAGCTTCCTTGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442544.7
CDS CAA 90 bp TGTGGTGTCTGGAATGAAGTATGTTTTGTATCAGCAGAGACCCATTaGAAAGTTGCTGCTTCCTTTCATCCATTCCCAAGGCCAGATGAA +
Preference number: 6 (lower is better)
Translates to: CGVWNEVCFVSAETH*KVAASFHPFPRPDE
Trigger: TTCATCTGGCCTTGGGAATGGATGAAAGGAAGCAGCAACTTTCAAATGGGTCTCTGCTGATACAAAACATACTTCATTCCAGACACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000578080.1
ENST00000579349.1
ENST00000579666.1
ENST00000580024.1
ENST00000581559.1
ENST00000582875.1
CDS CAA 90 bp ACACAACATTCCAGGACAGCATCTTTTCCTTCAATGGCTACTACATaGGATGGTCTTTGCAGAAAATACAGCTGTCTATGCAGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: TQHSRTASFPSMATT*DGLCRKYSCLCSPG
Trigger: TCCAGGACTGCATAGACAGCTGTATTTTCTGCAAAGACCATCCAATGTAGTAGCCATTGAAGGAAAAGATGCTGTCCTGGAATGTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
CDS CAA 90 bp ATCGGCTGTTGCAACTCTCTAGCGAGTGTCATCCATCCATATACTTaGAGTTATAAACTGCCATGGCTATGTTGTCCAAACTTTCTCAGC +
Preference number: 6 (lower is better)
Translates to: IGCCNSLASVIHPYT*SYKLPWLCCPNFLS
Trigger: GCTGAGAAAGTTTGGACAACATAGCCATGGCAGTTTATAACTCAAAGTATATGGATGGATGACACTCGCTAGAGAGTTGCAACAGCCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS TCA 72 bp TACACAGCGCCAGTCAATCTGTCCCTTGATGAAGCATaGATTTTAAAGATGCCCTTACATTGGCTGAATCCT +
Preference number: 6 (lower is better)
Translates to: YTAPVNLSLDEA*ILKMPLHWLNP
Trigger: AGGATTCAGCCAATGTAAGGGCATCTTTAAAATTCATGCTTCATCAAGGGACAGATTGACTGGCGCTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579702.1
CDS TCA 72 bp GATTGCATATTGTTTCACCCACTCCATCTCCACCTGTaGCAAGGAAGATGTTTCAGAGTCAAAAAGATTGGG +
Preference number: 6 (lower is better)
Translates to: DCILFHPLHLHL*QGRCFRVKKIG
Trigger: CCCAATCTTTTTGACTCTGAAACATCTTCCTTGTCACAGGTGGAGATGGAGTGGGTGAAACAATATGCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577224.1
CDS GCA 72 bp GATGGCATTAAGCTGCTTCATGAGTCCTTCCAAACTTaGCATTTGTTCACTCAGATCATCCTGTTCATACAC +
Preference number: 6 (lower is better)
Translates to: DGIKLLHESFQT*HLFTQIILFIH
Trigger: GTGTATGAACAGGATGATCTGAGTGAACAAATGGCAAGTTTGGAAGGACTCATGAAGCAGCTTAATGCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412726.5
ENST00000442544.7
CDS CCA 72 bp GACAGCATCTTTTCCTTCAATGGCTACTACATTGGATaGTCTTTGCAGAAAATACAGCTGTCTATGCAGTCC +
Preference number: 6 (lower is better)
Translates to: DSIFSFNGYYIG*SLQKIQLSMQS
Trigger: GGACTGCATAGACAGCTGTATTTTCTGCAAAGACCATCCAATGTAGTAGCCATTGAAGGAAAAGATGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
CDS GCA 72 bp TCTTTTCCTTCAATGGCTACTACATTGGATGGTCTTTaGAGAAAATACAGCTGTCTATGCAGTCCTGGATCT +
Preference number: 6 (lower is better)
Translates to: SFPSMATTLDGL*RKYSCLCSPGS
Trigger: AGATCCAGGACTGCATAGACAGCTGTATTTTCTGCAAAGACCATCCAATGTAGTAGCCATTGAAGGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
CDS CCA 72 bp CAAACTCAATATCCATGCTTTCATAGGCATACAGGTTaGAAGGATGATTTAAAAACCATGGCGGAACTGGTG +
Preference number: 6 (lower is better)
Translates to: QTQYPCFHRHTG*KDDLKTMAELV
Trigger: CACCAGTTCCGCCATGGTTTTTAAATCATCCTTCCAACCTGTATGCCTATGAAAGCATGGATATTGAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581580.5
CDS CAA 72 bp TGGAATGAAGTATGTTTTGTATCAGCAGAGACCCATTaGAAAGTTGCTGCTTCCTTTCATCCATTCCCAAGG +
Preference number: 6 (lower is better)
Translates to: WNEVCFVSAETH*KVAASFHPFPR
Trigger: CCTTGGGAATGGATGAAAGGAAGCAGCAACTTTCAAATGGGTCTCTGCTGATACAAAACATACTTCATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000578080.1
ENST00000579349.1
ENST00000579666.1
ENST00000580024.1
ENST00000581559.1
ENST00000582875.1
CDS CAA 72 bp ATCTTTTCCTTCAATGGCTACTACATTGGATGGTCTTaGCAGAAAATACAGCTGTCTATGCAGTCCTGGATC +
Preference number: 6 (lower is better)
Translates to: IFSFNGYYIGWS*QKIQLSMQSWI
Trigger: GATCCAGGACTGCATAGACAGCTGTATTTTCTGCAAAGACCATCCAATGTAGTAGCCATTGAAGGAAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
CDS CAA 72 bp TGCAACTCTCTAGCGAGTGTCATCCATCCATATACTTaGAGTTATAAACTGCCATGGCTATGTTGTCCAAAC +
Preference number: 6 (lower is better)
Translates to: CNSLASVIHPYT*SYKLPWLCCPN
Trigger: GTTTGGACAACATAGCCATGGCAGTTTATAACTCAAAGTATATGGATGGATGACACTCGCTAGAGAGTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS CAA 90 bp CCATGGCGGAACTTCAAGCTTCAGGAGAGTTCTCCTACAGTATTCTaGAATTTGTTGAACAAGTCCATGTTTCAGTTACTAATATCCTTC +
Preference number: 6 (lower is better)
Translates to: PWRNFKLQESSPTVF*NLLNKSMFQLLISF
Trigger: GAAGGATATTAGTAACTGAAACATGGACTTGTTCAACAAATTCAAGAATACTGTAGGAGAACTCTCCTGAAGCTTGAAGTTCCGCCATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580146.1
CDS CCA 72 bp CAAACTCAATATCCATGCTTTCATAGGCATACAGGTTaGAAGGATGATTTAAAAACCATGGCGGAACCAAGA +
Preference number: 6 (lower is better)
Translates to: QTQYPCFHRHTG*KDDLKTMAEPR
Trigger: TCTTGGTTCCGCCATGGTTTTTAAATCATCCTTCCAACCTGTATGCCTATGAAAGCATGGATATTGAGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000579883.1
CDS CCA 72 bp CAAACTCAATATCCATGCTTTCATAGGCATACAGGTTaGAAGGATGATTTAAAAACCATGGCGGAACAGCAA +
Preference number: 6 (lower is better)
Translates to: QTQYPCFHRHTG*KDDLKTMAEQQ
Trigger: TTGCTGTTCCGCCATGGTTTTTAAATCATCCTTCCAACCTGTATGCCTATGAAAGCATGGATATTGAGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578949.1
CDS CAA 72 bp CCACTGTCATCATCTGTCACATTGGAGATAAGCAAGTaGCTTCCACCCAATAAAGAATACTTTTTAGACCTG +
Preference number: 6 (lower is better)
Translates to: PLSSSVTLEISK*LPPNKEYFLDL
Trigger: CAGGTCTAAAAAGTATTCTTTATTGGGTGGAAGCAACTTGCTTATCTCCAATGTGACAGATGATGACAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000579883.1
ENST00000584710.5
CDS CAA 72 bp ACACAGGTATACATTCCACTGTCATCATCTGTCACATaGGAGATAAGCAAGTTGCTTCCACCCAATAAAGAA +
Preference number: 6 (lower is better)
Translates to: TQVYIPLSSSVT*EISKLLPPNKE
Trigger: TTCTTTATTGGGTGGAAGCAACTTGCTTATCTCCAATGTGACAGATGATGACAGTGGAATGTATACCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000579883.1
ENST00000584710.5
CDS TCA 72 bp GCCAGTTTGTGTTCACAGATTGCAAAGGCAGATATCTaGTCCAAGATTACAATATGTATGTCTCAGGATTTG +
Preference number: 6 (lower is better)
Translates to: ASLCSQIAKADI*SKITICMSQDL
Trigger: CAAATCCTGAGACATACATATTGTAATCTTGGATCAGATATCTGCCTTTGCAATCTGTGAACACAAACTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579666.1
CDS CCA 72 bp AAACACAACATTCCAGGACAGCATCTTTTCCTTCAATaGCTACTACATTGGATGGTCTTTGCAGAAAATACA +
Preference number: 6 (lower is better)
Translates to: KHNIPGQHLFLQ*LLHWMVFAENT
Trigger: TGTATTTTCTGCAAAGACCATCCAATGTAGTAGCCATTGAAGGAAAAGATGCTGTCCTGGAATGTTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
CDS CCA 72 bp CAAACTCAATATCCATGCTTTCATAGGCATACAGGTTaGAAGGATGATTTAAAAACCATGGCGGAACTTCAA +
Preference number: 6 (lower is better)
Translates to: QTQYPCFHRHTG*KDDLKTMAELQ
Trigger: TTGAAGTTCCGCCATGGTTTTTAAATCATCCTTCCAACCTGTATGCCTATGAAAGCATGGATATTGAGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580146.1
CDS CCA 72 bp GTCATCCATCCATATACTTTGAGTTATAAACTGCCATaGCTATGTTGTCCAAACTTTCTCAGCCTCACATTT +
Preference number: 6 (lower is better)
Translates to: VIHPYTLSYKLP*LCCPNFLSLTF
Trigger: AAATGTGAGGCTGAGAAAGTTTGGACAACATAGCCATGGCAGTTTATAACTCAAAGTATATGGATGGATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582875.1
CDS GCA 72 bp AACTTAATTCAGGCTTGCCAGTTTGTGTTCACAGATTaGAAAGGCAGATATCTGATCCAAGATTACAATATG +
Preference number: 6 (lower is better)
Translates to: NLIQACQFVFTD*KGRYLIQDYNM
Trigger: CATATTGTAATCTTGGATCAGATATCTGCCTTTGCAATCTGTGAACACAAACTGGCAAGCCTGAATTAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579666.1
CDS GCA 72 bp CAAACGCCTGCTCTGGTCAGTACAAACTGTATTGATTaGATTAACATAATAGTAGATCCAGTGGTCAAAAAT +
Preference number: 6 (lower is better)
Translates to: QTPALVSTNCID*INIIVDPVVKN
Trigger: ATTTTTGACCACTGGATCTACTATTATGTTAATGCAATCAATACAGTTTGTACTGACCAGAGCAGGCGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579666.1
CDS CAA 90 bp TATGTGACAACACAGGTATACATTCCACTGTCATCATCTGTCACATaGGAGATAAGCAAGTTGCTTCCACCCAATAAAGAATACTTTTTA +
Preference number: 6 (lower is better)
Translates to: YVTTQVYIPLSSSVT*EISKLLPPNKEYFL
Trigger: TAAAAAGTATTCTTTATTGGGTGGAAGCAACTTGCTTATCTCCAATGTGACAGATGATGACAGTGGAATGTATACCTGTGTTGTCACATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304775.12
ENST00000412726.5
ENST00000442544.7
ENST00000579883.1
ENST00000584710.5
CDS CAA 72 bp ATGTTTCAGTTACTAATATCCTTCATGGTCAGGAATTaGATTGTGTCCCTTTTCACCCATCATTTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: MFQLLISFMVRN*IVSLFTHHFSV
Trigger: CACAGAAAAATGATGGGTGAAAAGGGACACAATCAAATTCCTGACCATGAAGGATATTAGTAACTGAAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580146.1
CDS CAA 72 bp AAGCTTCAGGAGAGTTCTCCTACAGTATTCTTGAATTaGTTGAACAAGTCCATGTTTCAGTTACTAATATCC +
Preference number: 6 (lower is better)
Translates to: KLQESSPTVFLN*LNKSMFQLLIS
Trigger: GGATATTAGTAACTGAAACATGGACTTGTTCAACAAATTCAAGAATACTGTAGGAGAACTCTCCTGAAGCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580146.1
CDS CAA 72 bp AAACTTAATTCAGGCTTGCCAGTTTGTGTTCACAGATaGCAAAGGCAGATATCTGATCCAAGATTACAATAT +
Preference number: 6 (lower is better)
Translates to: KLNSGLPVCVHR*QRQISDPRLQY
Trigger: ATATTGTAATCTTGGATCAGATATCTGCCTTTGCAATCTGTGAACACAAACTGGCAAGCCTGAATTAAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579666.1