RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DCBLD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000057019

Ensembl transcript IDs: ENST00000326840.11, ENST00000326857.9, ENST00000449482.1, ENST00000460008.1, ENST00000469648.5, ENST00000470393.1, ENST00000479144.5, ENST00000486004.1, ENST00000494614.5, ENST00000496736.1

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCACAGCTTTGTGGCCACATTCATATTTAGATAAGCTCGGACTCTaGTCCCCTCTTCTGGAGATGGGGAGAGGCAAGTGTGTATGTGTT +
Preference number: 1 (lower is better)
Translates to: STALWPHSYLDKLGL*SPLLEMGRGKCVCV
Trigger: AACACATACACACTTGCCTCTCCCCATCTCCAGAAGAGGGGAGCAGAGTCCGAGCTTATCTAAATATGAATGTGGCCACAAAGCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR GCA 90 bp TCTGGAGATGGGGAGAGGCAAGTGTGTATGTGTTGTCATACTTACTaGATTAATTCTTCACTCGAACCGTTTACATCAGCGAATAAACCC +
Preference number: 1 (lower is better)
Translates to: SGDGERQVCMCCHTY*INSSLEPFTSANKP
Trigger: GGGTTTATTCGCTGATGTAAACGGTTCGAGTGAAGAATTAATGCAGTAAGTATGACAACACATACACACTTGCCTCTCCCCATCTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR GCA 90 bp GAATTTCAAGCCATTAGGTATTTCAAGAACAGTACCGTGCGTTATTaGCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCT +
Preference number: 1 (lower is better)
Translates to: EFQAIRYFKNSTVRY*QSGLQSHLEFINVP
Trigger: AGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAATGGCTTGAAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR TCA 90 bp CCTGTTTACACATTGAGGAGCATACTTAAAGGACATGAAGGGATCTaGATTCATGAGACTAAGGCAAGCATCACTCATCAGAAATACTCA +
Preference number: 1 (lower is better)
Translates to: PVYTLRSILKGHEGI*IHETKASITHQKYS
Trigger: TGAGTATTTCTGATGAGTGATGCTTGCCTTAGTCTCATGAATTCAGATCCCTTCATGTCCTTTAAGTATGCTCCTCAATGTGTAAACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR CCA 90 bp CCCTGCTCATTACAAGTCAGAAAATCCCAGCTACAGATCTTAAGATaGATAAGTGGATATGGCTGCAATAAAAACAATGCTTATATCACT +
Preference number: 1 (lower is better)
Translates to: PCSLQVRKSQLQILR*ISGYGCNKNNAYIT
Trigger: AGTGATATAAGCATTGTTTTTATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGACTTGTAATGAGCAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR TCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCACCCCAACCACTTCAGTaGCAGTTATGTAATACATTC +
Preference number: 2 (lower is better)
Translates to: RTVPCVIASQAYRAISSSPQPLQ*QLCNTF
Trigger: GAATGTATTACATAACTGTCACTGAAGTGGTTGGGG...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR GCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCTCAAGAACAGTACCGTaGGTTATTGCCAGTCAGGCT +
Preference number: 2 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSSRTVP*VIASQA
Trigger: AGCCTGACTGGCAATAACGCACGGTACTGTTCTTGA...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR TCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCCCCAACCACTTCAGTaGCAGTTATGTAATACATTC +
Preference number: 2 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLPQPLQ*QLCNTF
Trigger: GAATGTATTACATAACTGTCACTGAAGTGGTTGGGG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR TCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTTGGAACACGCAAGGATaGGACCAGGCCATATACTGT +
Preference number: 2 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFWNTQG*DQAIYC
Trigger: ACAGTATATGGCCTGGTCTCATCCTTGCGTGTTCCA...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR-3UTR GCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATGTGCTTTAAAACGATaGTTTGTAAAAAGCAGCATC +
Preference number: 2 (lower is better)
Translates to: RTVPCVIASQAYRAISSSCALKR*FVKSSI
Trigger: GATGCTGCTTTTTACAAAGCATCGTTTTAAAGCACA...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR TCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCATCAAACAGGACATTTaGAATTTAACAGGCGAGCAG +
Preference number: 2 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSIKQDI*NLTGEQ
Trigger: CTGCTCGCCTGTTAAATTTCAAATGTCCTGTTTGAT...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR TCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATGGACATGAAGGGATCTaGATTCATGAGACTAAGGCA +
Preference number: 2 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYGHEGI*IHETKA
Trigger: TGCCTTAGTCTCATGAATTCAGATCCCTTCATGTCC...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR TCA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATAGCTCTGGGCAGGTATaGACAAGTGGTGACATGGAA +
Preference number: 2 (lower is better)
Translates to: AEKPFESGSALHLESKVYSSGQV*TSGDME
Trigger: TTCCATGTCACCACTTGTTCATACCTGCCCAGAGCT...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR-3UTR CCA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATGAACAAGTGGTGACATaGAAGCTGCCAGGAGGTATC +
Preference number: 2 (lower is better)
Translates to: AEKPFESGSALHLESKVYEQVVT*KLPGGI
Trigger: GATACCTCCTGGCAGCTTCCATGTCACCACTTGTTC...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR-3UTR TCA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTCCAGGCCATATACTGTaGAGCATTAAAGCTCTAAAG +
Preference number: 2 (lower is better)
Translates to: SDYSTCRGKISTFWENITPGHIL*SIKALK
Trigger: CTTTAGAGCTTTAATGCTTCACAGTATATGGCCTGG...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR-3UTR TCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGATCAAACAGGACATTTaGAATTTAACAGGCGAGCAG +
Preference number: 2 (lower is better)
Translates to: QSHLEFINVPAALVINTLIKQDI*NLTGEQ
Trigger: CTGCTCGCCTGTTAAATTTCAAATGTCCTGTTTGAT...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR TCA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTATTTTTATCATATGGTaGGCTGCTCATGTCGTCTTG +
Preference number: 2 (lower is better)
Translates to: SDYSTCRGKISTFWENITIFIIW*AAHVVL
Trigger: CAAGACGACATGAGCAGCTCACCATATGATAAAAAT...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR-3UTR CCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTCTACAGATCTTAAGATaGATAAGTGGATATGGCTGC +
Preference number: 2 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFLQILR*ISGYGC
Trigger: GCAGCCATATCCACTTATCCATCTTAAGATCTGTAG...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR-3UTR GCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTTGTGCTTTAAAACGATaGTTTGTAAAAAGCAGCATC +
Preference number: 2 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFCALKR*FVKSSI
Trigger: GATGCTGCTTTTTACAAAGCATCGTTTTAAAGCACA...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR-3UTR TCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTATCAGGCCAACAGAAGTaGCTAGAACTTTATGGAAAA +
Preference number: 2 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILSGQQK*LELYGK
Trigger: TTTTCCATAAAGTTCTAGTCACTTCTGTTGGCCTGA...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR-3UTR GCA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATCTGAAAAGGGATGACTaGATTAATATATGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: AEKPFESGSALHLESKVYLKRDD*INICAF
Trigger: GAAAGCACATATATTAATGCAGTCATCCCTTTTCAG...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR GCA 72 bp TTGTGGCCACATTCATATTTAGATAAGCTCGGACTCTaGTCCCCTCTTCTGGAGATGGGGAGAGGCAAGTGT +
Preference number: 3 (lower is better)
Translates to: LWPHSYLDKLGL*SPLLEMGRGKC
Trigger: ACACTTGCCTCTCCCCATCTCCAGAAGAGGGGAGCAGAGTCCGAGCTTATCTAAATATGAATGTGGCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR TCA 72 bp AAGACACCAAAGGGCCTCAAGTGGAACACGCAAGGATaGGACCAGGCCATATACTGTGAAGCATTAAAGCTC +
Preference number: 3 (lower is better)
Translates to: KTPKGLKWNTQG*DQAIYCEALKL
Trigger: GAGCTTTAATGCTTCACAGTATATGGCCTGGTCTCATCCTTGCGTGTTCCACTTGAGGCCCTTTGGTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR CAA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATCAGTACCGTGCGTTATaGCCAGTCAGGCTTACAGAG +
Preference number: 3 (lower is better)
Translates to: VRKSQLQILRWISGYGCNQYRAL*PVRLTE
Trigger: CTCTGTAAGCCTGACTGGCAATAACGCACGGTACTG...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR TCA 72 bp TATTTTGCCATGTCTAAAACTAGCTCTGGGCAGGTATaGACAAGTGGTGACATGGAAGCTGCCAGGAGGTAT +
Preference number: 3 (lower is better)
Translates to: YFAMSKTSSGQV*TSGDMEAARRY
Trigger: ATACCTCCTGGCAGCTTCCATGTCACCACTTGTTCATACCTGCCCAGAGCTAGTTTTAGACATGGCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR GCA 72 bp GCCATTAGGTATTTCAAGAACAGTACCGTGCGTTATTaGCAGTCAGGCTTACAGAGCCATCTCGAGTTCATT +
Preference number: 3 (lower is better)
Translates to: AIRYFKNSTVRY*QSGLQSHLEFI
Trigger: AATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR GCA 72 bp AATTTCAAGCCATTAGGTATTTCAAGAACAGTACCGTaGGTTATTGCCAGTCAGGCTTACAGAGCCATCTCG +
Preference number: 3 (lower is better)
Translates to: NFKPLGISRTVP*VIASQAYRAIS
Trigger: CGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAATGGCTTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR CAA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCTATCAAACAGGACATTaGAAATTTAACAGGCGAGCA +
Preference number: 3 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSYQTGH*KFNRRA
Trigger: TGCTCGCCTGTTAAATTTCAAATGTCCTGTTTGATA...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR TCA 72 bp ACATTGAGGAGCATACTTAAAGGACATGAAGGGATCTaGATTCATGAGACTAAGGCAAGCATCACTCATCAG +
Preference number: 3 (lower is better)
Translates to: TLRSILKGHEGI*IHETKASITHQ
Trigger: CTGATGAGTGATGCTTGCCTTAGTCTCATGAATTCAGATCCCTTCATGTCCTTTAAGTATGCTCCTCAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR-3UTR CAA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTTCACCTTCCACAGCTTaGTGGCCACATTCATATTTA +
Preference number: 3 (lower is better)
Translates to: SDYSTCRGKISTFWENITSPSTA*WPHSYL
Trigger: TAAATATGAATGTGGCCACAAAGCTGTGGAAGGTGA...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR-3UTR CAA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATTATCAAACAGGACATTaGAAATTTAACAGGCGAGCA +
Preference number: 3 (lower is better)
Translates to: VRKSQLQILRWISGYGCNYQTGH*KFNRRA
Trigger: TGCTCGCCTGTTAAATTTCAAATGTCCTGTTTGATA...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
3UTR CCA 72 bp GACTACAGTACATGCCGAGGTAAGATAAGTACATTCTaGGAGAATATCACTGACGCTCAAACCATTTTTATT +
Preference number: 3 (lower is better)
Translates to: DYSTCRGKISTF*ENITDAQTIFI
Trigger: AATAAAAATGGTTTGAGCGTCAGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
3UTR CCA 72 bp TTACAAGTCAGAAAATCCCAGCTACAGATCTTAAGATaGATAAGTGGATATGGCTGCAATAAAAACAATGCT +
Preference number: 3 (lower is better)
Translates to: LQVRKSQLQILR*ISGYGCNKNNA
Trigger: AGCATTGTTTTTATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGACTTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCAGGCCGGCAGTCTGCCTaGATAGTGCGGGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSGRQSA*IVRVPR
Trigger: CCGAGGCACCCGCACTATGCAGGCAGACTGCCGGCC...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGACTGCGGGCAGCGCCTaGCTCTCACCACCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLTAGSA*LSPPPG
Trigger: GCCGGGCGGTGGTGAGAGCCAGGCGCTGCCCGCAGT...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATACTGCGGGCAGCGCCTaGCTCTCACCACCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYTAGSA*LSPPPG
Trigger: GCCGGGCGGTGGTGAGAGCCAGGCGCTGCCCGCAGT...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATCGGCGGCCGGCAGTCTaGCTGCATAGTGCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNRRPAV*LHSAGA
Trigger: GGCACCCGCACTATGCAGGCAGACTGCCGGCCGCCG...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTCGGGGTATCATACTaGGCCTGGGCTGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSFGVSY*AWAEEQ
Trigger: CTGCTCCTCAGCCCAGGCCCAGTATGATACCCCGAA...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCACTCTTGCTCTCTAGGTaGCAATGCAGAGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSLLLSR*QCRARA
Trigger: TGCCCTGGCTCTGCATTGTCACCTAGAGAGCAAGAG...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGTGGATGTGGAGGGCTaGCCAACTGAAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLVDVEG*PTEVVG
Trigger: CCCCACAACTTCAGTTGGTCAGCCCTCCACATCCAC...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCAGGTATGAACAAGTGGTaGCATGGAAGCTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSGMNKW*HGSCQE
Trigger: CTCCTGGCAGCTTCCATGTCACCACTTGTTCATACC...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCGCCGCCCAACGTGTTTaGCACTACTCCTGCATGCAC +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSAAQRV*HYSCMH
Trigger: GTGCATGCAGGAGTAGTGTCAAACACGTTGGGCGGC...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCCCTGCAGCACTGTGGTaGCTTCTCTTGGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSPAALW*LLLDSG
Trigger: ACCTGAGTCCAAGAGAAGTCACCACAGTGCTGCAGG...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCCTGCAGCACTGTGGTaGCTTCTCTTGGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQPAALW*LLLDSG
Trigger: ACCTGAGTCCAAGAGAAGTCACCACAGTGCTGCAGG...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCGTGGATGTGGAGGGCTaGCCAACTGAAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSVDVEG*PTEVVG
Trigger: CCCCACAACTTCAGTTGGTCAGCCCTCCACATCCAC...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCACACAGGGACAAGAACTaGAGCCAGCGCTACATCTTT +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSHRDKN*SQRYIF
Trigger: AAAGATGTAGCGCTGGCTGCAGTTCTTGTCCCTGTG...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCTGGCTGAGCATACTCTaGAGAGTCAGCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLWLSIL*RVSLQH
Trigger: GTGCTGCAGGCTGACTCTGCAGAGTATGCTCAGCCA...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCACCGCGTCCAGAAACATaGATTCCACTCATGAACAGC +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSPRPET*IPLMNS
Trigger: GCTGTTCATGAGTGGAATCCATGTTTCTGGACGCGG...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCTCAGGCCCCGTAATTaGGAGTGGTTCAGCATAGGC +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLLRPRN*EWFSIG
Trigger: GCCTATGCTGAACCACTCCCAATTACGGGGCCTGAG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCGTATCATACTGGGCCTaGGCTGAGGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSVSYWA*AEEQLS
Trigger: TGACAGCTGCTCCTCAGCCCAGGCCCAGTATGATAC...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCAGATGATGCTGTTATTTaGGGATCCGCGATCACACCA +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSDDAVI*GSAITP
Trigger: TGGTGTGATCGCGGATCCTCAAATAACAGCATCATC...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCGAGGAGGTGGAGGTTaGGTAAGTTTTGGAGGACGA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQRGGGG*VSFGGR
Trigger: TCGTCCTCCAAAACTTACTCAACCTCCACCTCCTCG...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCCGAGGAGGTGGAGGTTaGGTAAGTTTTGGAGGACGA +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSRGGGG*VSFGGR
Trigger: TCGTCCTCCAAAACTTACTCAACCTCCACCTCCTCG...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCACCAACCTTCATTGTaGCGGCAAGCCAAAGAGACC +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLHQPSL*RQAKET
Trigger: GGTCTCTTTGGCTTGCCGTCACAATGAAGGTTGGTG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326857.9
CDS-3UTR TCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGGTATGAACAAGTGGTaGCATGGAAGCTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLGMNKW*HGSCQE
Trigger: CTCCTGGCAGCTTCCATGTCACCACTTGTTCATACC...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCACCCATTCACAAACAGTaGTGTTGGGATAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSPIHKQ*CWDRSV
Trigger: CACAGACCTATCCCAACAGCACTGTTTGTGAATGGG...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCACATGATGATTGGGGTTaGATACTCAGGCCCCGTAAT +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSHDDWG*ILRPRN
Trigger: ATTACGGGGCCTGAGTATGCAACCCCAATCATCATG...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCAAAGCAGACAACCAGCTaGGCAGTACTTACTGAACTC +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSKQTTS*AVLTEL
Trigger: GAGTTCAGTAAGTACTGCCCAGCTGGTTGTCTGCTT...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCTTCTCTTGCCCTGTGTaGTCAGTCCACTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLFSCPV*SVHSST
Trigger: TGTGCTGGAGTGGACTGACCACACAGGGCAAGAGAA...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGACTAGTGGGGGAGGTTaGTTCCCCGTAGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQTSGGG*FPVALK
Trigger: TTTCAAGGCTACGGGGAACCAACCTCCCCCACTAGT...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATGCCGCCCAACGTGTTTaGCACTACTCCTGCATGCAC +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYAAQRV*HYSCMH
Trigger: GTGCATGCAGGAGTAGTGTCAAACACGTTGGGCGGC...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGTGGAACACGCAAGGATaGGACCAGGCCATATACTGT +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQWNTQG*DQAIYC
Trigger: ACAGTATATGGCCTGGTCTCATCCTTGCGTGTTCCA...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCACTGCTCATGTCGTCTTaGCAGTCTGAAGGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSLLMSS*QSEGFK
Trigger: TTTAAAGCCTTCAGACTGTCAAGACGACATGAGCAG...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATGCACACCAGCCATaGACAATGGCGAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSHAHQP*TMARNL
Trigger: GAGATTCCTCGCCATTGTGCATGGCTGGTGTGCATG...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCGACACTACTCCTGCATaGACACCAGCCATGCACAAT +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSDTTPA*TPAMHN
Trigger: ATTGTGCATGGCTGGTGTGCATGCAGGAGTAGTGTC...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCAGTGCAGGAAATTCATTaGTACTGCGAGGTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSVQEIH*YCEVVV
Trigger: CACTACAACCTCGCAGTAGCAATGAATTTCCTGCAC...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGAGTACCGTGCGTTATTaGCAGTCAGGCTTACAGAGC +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQSTVRY*QSGLQS
Trigger: GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACT...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCCGCGTCCAGAAACATaGATTCCACTCATGAACAGC +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQPRPET*IPLMNS
Trigger: GCTGTTCATGAGTGGAATCCATGTTTCTGGACGCGG...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCTTCTCTTGCCCTGTGTaGTCAGTCCACTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSFSCPV*SVHSST
Trigger: TGTGCTGGAGTGGACTGACCACACAGGGCAAGAGAA...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCACTGGTATTCATCAGTaGCAAAAGCAGCCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLTGIHQ*QKQPKA
Trigger: CGCCTTGGGCTGCTTTTGCCACTGATGAATACCAGT...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCACTAGTGGGGGAGGTTaGTTCCCCGTAGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSTSGGG*FPVALK
Trigger: TTTCAAGGCTACGGGGAACCAACCTCCCCCACTAGT...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATTTCGGGGTATCATACTaGGCCTGGGCTGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNFGVSY*AWAEEQ
Trigger: CTGCTCCTCAGCCCAGGCCCAGTATGATACCCCGAA...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAACAAGTGGTGACATaGAAGCTGCCAGGAGGTATC +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLEQVVT*KLPGGI
Trigger: GATACCTCCTGGCAGCTTCCATGTCACCACTTGTTC...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGGATGATGCTGTTATTTaGGGATCCGCGATCACACCA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQDDAVI*GSAITP
Trigger: TGGTGTGATCGCGGATCCTCAAATAACAGCATCATC...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGTCTCTTGGACTCAGGTaGTTAACTTCGCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQSLGLR*LTSLLL
Trigger: TAGCAGCAGCGAAGTTAATCACCTGAGTCCAAGAGA...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATCCTCCTACCAGTGGCTaGGCATACTCTGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYPPTSG*AYSAES
Trigger: TGACTCTGCAGAGTATGCTCAGCCACTGGTAGGAGG...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATCCTCCTACCAGTGGCTaGGCATACTCTGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNPPTSG*AYSAES
Trigger: TGACTCTGCAGAGTATGCTCAGCCACTGGTAGGAGG...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCCGAGGTTGTAGTGGTTaGGTAAATTTTGGGGCACGA +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSRGCSG*VNFGAR
Trigger: TCGTGCCCCAAAATTTACGCAACCACTACAACCTCG...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCGAGGTTGTAGTGGTTaGGTAAATTTTGGGGCACGA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQRGCSG*VNFGAR
Trigger: TCGTGCCCCAAAATTTACGCAACCACTACAACCTCG...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCAATGGTCCACTGCTTTTaGAGGAAGAAACTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSMVHCF*RKKLLH
Trigger: ATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCAT...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTTGGCTGAGCATACTCTaGAGAGTCAGCCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFWLSIL*RVSLQH
Trigger: GTGCTGCAGGCTGACTCTGCAGAGTATGCTCAGCCA...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCCATGATGATTGGGGTTaGATACTCAGGCCCCGTAAT +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSHDDWG*ILRPRN
Trigger: ATTACGGGGCCTGAGTATGCAACCCCAATCATCATG...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCTGATACTTCTTGTGTaGTCTGTGGCACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQLILLV*SVAPGT
Trigger: TGTACCAGGTGCCACAGAGCACACAAGAAGTATCAG...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCACAAACAGTGCTGTTaGGATAGGTCTGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLHKQCC*DRSVGS
Trigger: ACTACCCACAGACCTATCCCAACAGCACTGTTTGTG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGAAGCAGACAACCAGCTaGGCAGTACTTACTGAACTC +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQKQTTS*AVLTEL
Trigger: GAGTTCAGTAAGTACTGCCCAGCTGGTTGTCTGCTT...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCACTGGTATTCATCAGTaGCAAAAGCAGCCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSTGIHQ*QKQPKA
Trigger: CGCCTTGGGCTGCTTTTGCCACTGATGAATACCAGT...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCGCTGTTCCGAGGAGGTaGAGGTTGAGTAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSAVPRR*RLSKFW
Trigger: CCAAAACTTACTCAACCTCCACCTCCTCGGAACAGC...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCACTGGGGTTTCCTCATaGTCCACTGCTTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSTGVSS*STAFAG
Trigger: TCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGT...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCAATTCCTCCTACCAGTaGCTGAGCATACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLNSSYQ*LSILCR
Trigger: TCTGCAGAGTATGCTCAGCCACTGGTAGGAGGAATT...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATGTATCATACTGGGCCTaGGCTGAGGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNVSYWA*AEEQLS
Trigger: TGACAGCTGCTCCTCAGCCCAGGCCCAGTATGATAC...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGGTGCTCTGTGGCACCTaGTACACCAATTCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLVLCGT*YTNSSG
Trigger: CCCAGACGAATTGGTGTACCAGGTGCCACAGAGCAC...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGGGCAACATCATAATCTaGTGGCTCAGGCCAACAGAA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQGNIII*WLRPTE
Trigger: TTCTGTTGGCCTGAGCCACCAGATTATGATGTTGCC...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCAAAGTCACCAAATTTaGTGCGAACTCTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLQSHQI*CELSLP
Trigger: TGGGAGAGAGAGTTCGCATCAAATTTGGTGACTTTG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCAAAGTCACCAAATTTaGTGCGAACTCTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQQSHQI*CELSLP
Trigger: TGGGAGAGAGAGTTCGCATCAAATTTGGTGACTTTG...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGATCTATAACAGAGTATaGGGCCAAAAATCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQIYNRV*GQKSAS
Trigger: GGACGCGGATTTTTGGCCTCATACTCTGTTATAGAT...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCATCTATAACAGAGTATaGGGCCAAAAATCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSIYNRV*GQKSAS
Trigger: GGACGCGGATTTTTGGCCTCATACTCTGTTATAGAT...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCCACTCCAGCACAGATaGTGCTGTTATTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSPLQHR*CCYLRI
Trigger: GATCCTCAAATAACAGCATCATCTGTGCTGGAGTGG...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCCTTTAGGAATAAACTaGCATCCGAGCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLPLGIN*HPSSSI
Trigger: AATGGAGCTGCTCGGATGTCAGTTTATTCCTAAAGG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTAGTTGTGGGGTGCCCTaGCATGTCCATGATGATTGG +
Preference number: 4 (lower is better)
Translates to: SDYSTCRGKISTFWENITSCGVP*HVHDDW
Trigger: CCAATCATCATGGACATGTCAGGGCACCCCACAACT...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATAGTTGTGGGGTGCCCTaGCATGTCCATGATGATTGG +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYSCGVP*HVHDDW
Trigger: CCAATCATCATGGACATGTCAGGGCACCCCACAACT...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGGGACATGAAGGGATCTaGATTCATGAGACTAAGGCA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQGHEGI*IHETKA
Trigger: TGCCTTAGTCTCATGAATTCAGATCCCTTCATGTCC...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCTGCTCATGTCGTCTTaGCAGTCTGAAGGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLLLMSS*QSEGFK
Trigger: TTTAAAGCCTTCAGACTGTCAAGACGACATGAGCAG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCGTGCAGGAAATTCATTaGTACTGCGAGGTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSVQEIH*YCEVVV
Trigger: CACTACAACCTCGCAGTAGCAATGAATTTCCTGCAC...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTTCTGCAGAGTCAGCCTaGAGCACTGTGGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: SDYSTCRGKISTFWENITSAESA*STVVTS
Trigger: AGAAGTCACCACAGTGCTGCAGGCTGACTCTGCAGA...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGTCTGCAGAGTCAGCCTaGAGCACTGTGGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLSAESA*STVVTS
Trigger: AGAAGTCACCACAGTGCTGCAGGCTGACTCTGCAGA...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCTCAAGAACAGTACCGTaGGTTATTGCCAGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSSRTVP*VIASQA
Trigger: AGCCTGACTGGCAATAACGCACGGTACTGTTCTTGA...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTGATAAGCTCGGACTCTaGTCCCCTCTTCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFDKLGL*SPLLEM
Trigger: CATCTCCAGAAGAGGGGAGCAGAGTCCGAGCTTATC...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGTTCCACTTTTCCCAGTaGCACACACACACACACAAA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQFHFSQ*HTHTHK
Trigger: TTTGTGTGTGTGTGTGTGGCACTGGGAAAAGTGGAA...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCATTACAACACTGATTTaGCCGCCCAACGTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSITTLI*PPNVFD
Trigger: GTCAAACACGTTGGGCGGCCAAATCAGTGTTGTAAT...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGATTACAACACTGATTTaGCCGCCCAACGTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQITTLI*PPNVFD
Trigger: GTCAAACACGTTGGGCGGCCAAATCAGTGTTGTAAT...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCAAGGTTGAGTAAGTTTTaGAGGACGACCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSRLSKF*RTTFRN
Trigger: ATTCCTAAAGGTCGTCCTCCAAAACTTACTCAACCT...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTGCTGCTATAGCGAACTaGGGTTTCCTCATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFAAIAN*GFLMVH
Trigger: GTGGACCATGAGGAAACCCCAGTTCGCTATAGCAGC...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGGCTGCTATAGCGAACTaGGGTTTCCTCATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLAAIAN*GFLMVH
Trigger: GTGGACCATGAGGAAACCCCAGTTCGCTATAGCAGC...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCAGCAGCTGTCAGTCCTaGAGAGAAGTGTATTGTAAG +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLSSCQS*REVYCK
Trigger: CTTACAATACACTTCTCTCCAGGACTGACAGCTGCT...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGCCCCTCTTCTGGAGATaGGGAGAGGCAAGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLPLFWR*GEASVY
Trigger: ATACACACTTGCCTCTCCCCATCTCCAGAAGAGGGG...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGATCCCTTCCTGCTCCTaGTACTTCTTGTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLIPSCS*YFLCAL
Trigger: CAGAGCACACAAGAAGTATCAGGAGCAGGAAGGGAT...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCCAGGCCATATACTGTaGAGCATTAAAGCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQPGHIL*SIKALK
Trigger: CTTTAGAGCTTTAATGCTTCACAGTATATGGCCTGG...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATTGGAACACGCAAGGATaGGACCAGGCCATATACTGT +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNWNTQG*DQAIYC
Trigger: ACAGTATATGGCCTGGTCTCATCCTTGCGTGTTCCA...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCTGTCTGTTCCCTAGGTaGCATATAGGACTACTCAAA +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLCLFPR*HIGLLK
Trigger: TTTGAGTAGTCCTATATGTCACCTAGGGAACAGACA...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATAGCTCTGGGCAGGTATaGACAAGTGGTGACATGGAA +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYSSGQV*TSGDME
Trigger: TTCCATGTCACCACTTGTTCATACCTGCCCAGAGCT...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCTATACAAATACTGAGTaGCTACAGTACATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSYTNTE*LQYMPR
Trigger: CCTCGGCATGTACTGTAGTCACTCAGTATTTGTATA...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTTTCCAACTGTTCTCTTaGCCTGTGTGGTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFFQLFS*PVWSVH
Trigger: GTGGACTGACCACACAGGGCAAGAGAACAGTTGGAA...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATTTCCAACTGTTCTCTTaGCCTGTGTGGTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNFQLFS*PVWSVH
Trigger: GTGGACTGACCACACAGGGCAAGAGAACAGTTGGAA...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCGAAATTCATTGCTACTaGGAGGTTGTAGTGGTTGCG +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSEIHCY*EVVVVA
Trigger: CGCAACCACTACAACCTCGCAGTAGCAATGAATTTC...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGCACAGGGACAAGAACTaGAGCCAGCGCTACATCTTT +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLHRDKN*SQRYIF
Trigger: AAAGATGTAGCGCTGGCTGCAGTTCTTGTCCCTGTG...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCTTCCTCATGGTCCACTaGTTTTGCAGGAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSFLMVH*FCRKKL
Trigger: CAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAA...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTACTGAAGTTGTGGGGTaGCCTGACATGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: SDYSTCRGKISTFWENITTEVVG*PDMSMM
Trigger: CATCATGGACATGTCAGGGCACCCCACAACTTCAGT...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATACTGAAGTTGTGGGGTaGCCTGACATGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNTEVVG*PDMSMM
Trigger: CATCATGGACATGTCAGGGCACCCCACAACTTCAGT...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTAGTACCGTGCGTTATTaGCAGTCAGGCTTACAGAGC +
Preference number: 4 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFSTVRY*QSGLQS
Trigger: GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACT...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCGTTGGGATAGGTCTGTaGGTAGTTTATGGATGTAAG +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSVGIGL*VVYGCK
Trigger: CTTACATCCATAAACTACCCACAGACCTATCCCAAC...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCAATTTTCTGCTGCCATTaGGTAGGATTCACTCTAATA +
Preference number: 4 (lower is better)
Translates to: RTVPCVIASQAYRAISSSIFCCH*VGFTLI
Trigger: TATTAGAGTGAATCCTACCCAATGGCAGCAGAAAAT...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGGCTGTTCCGAGGAGGTaGAGGTTGAGTAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLAVPRR*RLSKFW
Trigger: CCAAAACTTACTCAACCTCCACCTCCTCGGAACAGC...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATACTGGGGTTTCCTCATaGTCCACTGCTTTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYTGVSS*STAFAG
Trigger: TCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGT...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGTGTGGTGACTTCTCTTaGACTCAGGTGATTAACTTC +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQCGDFS*TQVINF
Trigger: GAAGTTAATCACCTGAGTCCAAGAGAAGTCACCACA...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGCATGTCCATGATGATTaGGGTTGCATACTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLHVHDD*GCILRP
Trigger: GGGCCTGAGTATGCAACCCCAATCATCATGGACATG...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCAGCAGCTGTCAGTCCTaGAGAGAAGTGTATTGTAAG +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSSSCQS*REVYCK
Trigger: CTTACAATACACTTCTCTCCAGGACTGACAGCTGCT...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCAACATCATAATCTGGTaGCTCAGGCCAACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSNIIIW*LRPTEV
Trigger: CACTTCTGTTGGCCTGAGCCACCAGATTATGATGTT...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATCCACTCCAGCACAGATaGTGCTGTTATTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYPLQHR*CCYLRI
Trigger: GATCCTCAAATAACAGCATCATCTGTGCTGGAGTGG...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCATCAAACAGGACATTTaGAATTTAACAGGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSIKQDI*NLTGEQ
Trigger: CTGCTCGCCTGTTAAATTTCAAATGTCCTGTTTGAT...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCTTCCTGTTTACACATTaGGGAGCATACTTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSFLFTH*GAYLKD
Trigger: GTCCTTTAAGTATGCTCCTCAATGTGTAAACAGGAA...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCATTTTTATCATATGGTaGGCTGCTCATGTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSIFIIW*AAHVVL
Trigger: CAAGACGACATGAGCAGCTCACCATATGATAAAAAT...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATTGCTCTCTTCCCACCTaGAAAGGGATGACTGCATTA +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNCSLPT*KGMTAL
Trigger: TAATGCAGTCATCCCTTTTCAGGTGGGAAGAGAGCA...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCTGGGAGAATATCACTaGCGCTCAAACCATTTTTAT +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLLGEYH*RSNHFY
Trigger: ATAAAAATGGTTTGAGCGTCAGTGATATTCTCCCAG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATCATGCACACCAGCCATaGACAATGGCGAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: AEKPFESGSALHLESKVYHAHQP*TMARNL
Trigger: GAGATTCCTCGCCATTGTGCATGGCTGGTGTGCATG...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCTTTGCAGGAAGAAACTaGTTCATTCCTTTCCACCAA +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSFAGRN*FIPFHQ
Trigger: TTGGTGGAAAGGAATGAAGCAGTTTCTTCCTGCAAA...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATCTGATACTTCTTGTGTaGTCTGTGGCACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNLILLV*SVAPGT
Trigger: TGTACCAGGTGCCACAGAGCACACAAGAAGTATCAG...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGCACAAACAGTGCTGTTaGGATAGGTCTGTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLHKQCC*DRSVGS
Trigger: ACTACCCACAGACCTATCCCAACAGCACTGTTTGTG...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTACCAGCCATGCACAATaGCGAGGAATCTCTATATCC +
Preference number: 4 (lower is better)
Translates to: SDYSTCRGKISTFWENITTSHAQ*RGISIS
Trigger: GGATATAGAGATTCCTCGCCATTGTGCATGGCTGGT...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATACCAGCCATGCACAATaGCGAGGAATCTCTATATCC +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNTSHAQ*RGISIS
Trigger: GGATATAGAGATTCCTCGCCATTGTGCATGGCTGGT...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCAGGTTGAGTAAGTTTTaGAGGACGACCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLRLSKF*RTTFRN
Trigger: ATTCCTAAAGGTCGTCCTCCAAAACTTACTCAACCT...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCACCTTTGGCTATTTTTaGAGGGGCTGTAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSTFGYF*RGCSVF
Trigger: AAAAACACTACAGCCCCTCCAAAAATAGCCAAAGGT...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGCCCCGTAATTGGGAGTaGTTCAGCATAGGCATGATA +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLPRNWE*FSIGMI
Trigger: TATCATGCCTATGCTGAACCACTCCCAATTACGGGG...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATCCCCGTAATTGGGAGTaGTTCAGCATAGGCATGATA +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYPRNWE*FSIGMI
Trigger: TATCATGCCTATGCTGAACCACTCCCAATTACGGGG...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTACTCAGGCCCCGTAATTaGGAGTGGTTCAGCATAGGC +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILLRPRN*EWFSIG
Trigger: GCCTATGCTGAACCACTCCCAATTACGGGGCCTGAG...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTAGTGCTCTGTGGCACCTaGTACACCAATTCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILVLCGT*YTNSSG
Trigger: CCCAGACGAATTGGTGTACCAGGTGCCACAGAGCAC...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGTTCTTGTGTGCTCTGTaGCACCTGGTACACCAATTC +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLFLCAL*HLVHQF
Trigger: GAATTGGTGTACCAGGTGCCACAGAGCACACAAGAA...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCCTACAGATCTTAAGATaGATAAGTGGATATGGCTGC +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSLQILR*ISGYGC
Trigger: GCAGCCATATCCACTTATCCATCTTAAGATCTGTAG...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCTACAGATCTTAAGATaGATAAGTGGATATGGCTGC +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLLQILR*ISGYGC
Trigger: GCAGCCATATCCACTTATCCATCTTAAGATCTGTAG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAATCTCTATATCCATaGGGAATTGTTCCAGATATC +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLESLYP*GIVPDI
Trigger: GATATCTGGAACAATTCCTCATGGATATAGAGATTC...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTGGACATGAAGGGATCTaGATTCATGAGACTAAGGCA +
Preference number: 4 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFGHEGI*IHETKA
Trigger: TGCCTTAGTCTCATGAATTCAGATCCCTTCATGTCC...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCTTCCTGTTTACACATTaGGGAGCATACTTAAAGGAC +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSFLFTH*GAYLKD
Trigger: GTCCTTTAAGTATGCTCCTCAATGTGTAAACAGGAA...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCTCAGGCCAACAGAAGTaGCTAGAACTTTATGGAAAA +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSSGQQK*LELYGK
Trigger: TTTTCCATAAAGTTCTAGTCACTTCTGTTGGCCTGA...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGAAAAAGCAATCCCCCTaGTCATTACAAGTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQKKQSP*SLQVRK
Trigger: TTTTCTGACTTGTAATGAGCAGGGGGATTGCTTTTT...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCACGTGCAATAATTGGTaGCAAAAAGTTATTACGCAC +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLTCNNW*QKVITH
Trigger: GTGCGTAATAACTTTTTGCCACCAATTATTGCACGT...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTTGGTTGCGTAAATTTTaGGGCACGACCTTTGGCTAT +
Preference number: 4 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFWLRKF*GTTFGY
Trigger: ATAGCCAAAGGTCGTGCCCCAAAATTTACGCAACCA...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATTGGTTGCGTAAATTTTaGGGCACGACCTTTGGCTAT +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYWLRKF*GTTFGY
Trigger: ATAGCCAAAGGTCGTGCCCCAAAATTTACGCAACCA...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTCCAGCGCTACATCTTTaGTTACATTTGGAGTTACGG +
Preference number: 4 (lower is better)
Translates to: SDYSTCRGKISTFWENITPALHL*LHLELR
Trigger: CCGTAACTCCAAATGTAACCAAAGATGTAGCGCTGG...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGCCAGCGCTACATCTTTaGTTACATTTGGAGTTACGG +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLPALHL*LHLELR
Trigger: CCGTAACTCCAAATGTAACCAAAGATGTAGCGCTGG...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATCATGTCCATGATGATTaGGGTTGCATACTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AEKPFESGSALHLESKVYHVHDD*GCILRP
Trigger: GGGCCTGAGTATGCAACCCCAATCATCATGGACATG...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATAACATCATAATCTGGTaGCTCAGGCCAACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNNIIIW*LRPTEV
Trigger: CACTTCTGTTGGCCTGAGCCACCAGATTATGATGTT...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGCCCCAACCACTTCAGTaGCAGTTATGTAATACATTC +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLPQPLQ*QLCNTF
Trigger: GAATGTATTACATAACTGTCACTGAAGTGGTTGGGG...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTACGATCACGCAGTCCTaGAAAATACACGTTAGGTTT +
Preference number: 4 (lower is better)
Translates to: SDYSTCRGKISTFWENITTITQS*KIHVRF
Trigger: AAACCTAACGTGTATTTTTCAGGACTGCGTGATCGT...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATACGATCACGCAGTCCTaGAAAATACACGTTAGGTTT +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNTITQS*KIHVRF
Trigger: AAACCTAACGTGTATTTTTCAGGACTGCGTGATCGT...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATTGTCTGTTCCCTAGGTaGCATATAGGACTACTCAAA +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNCLFPR*HIGLLK
Trigger: TTTGAGTAGTCCTATATGTCACCTAGGGAACAGACA...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTAAGCTCTGGGCAGGTATaGACAAGTGGTGACATGGAA +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILSSGQV*TSGDME
Trigger: TTCCATGTCACCACTTGTTCATACCTGCCCAGAGCT...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCAACATATACAAATACTaGGTGACTACAGTACATGCC +
Preference number: 4 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSNIYKY*VTTVHA
Trigger: GGCATGTACTGTAGTCACTCAGTATTTGTATATGTT...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTATGGCAATTTTCTGCTaGCATTGGGTAGGATTCACT +
Preference number: 4 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFMAIFC*HWVGFT
Trigger: AGTGAATCCTACCCAATGGCAGCAGAAAATTGCCAT...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATATGGCAATTTTCTGCTaGCATTGGGTAGGATTCACT +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYMAIFC*HWVGFT
Trigger: AGTGAATCCTACCCAATGGCAGCAGAAAATTGCCAT...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTTTCATGGCAATTTTCTaGTGCCATTGGGTAGGATTC +
Preference number: 4 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFFMAIF*CHWVGF
Trigger: GAATCCTACCCAATGGCAGCAGAAAATTGCCATGAA...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGTTCATGGCAATTTTCTaGTGCCATTGGGTAGGATTC +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLFMAIF*CHWVGF
Trigger: GAATCCTACCCAATGGCAGCAGAAAATTGCCATGAA...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATATGGTCCACTGCTTTTaGAGGAAGAAACTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNMVHCF*RKKLLH
Trigger: ATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCAT...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGTGTGCTTTAAAACGATaGTTTGTAAAAAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: VIASQAYRAISSSLMYLQCALKR*FVKSSI
Trigger: GATGCTGCTTTTTACAAAGCATCGTTTTAAAGCACA...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTTATCATATGGTGAGCTaGTCATGTCGTCTTGACAGT +
Preference number: 4 (lower is better)
Translates to: SDYSTCRGKISTFWENITYHMVS*SCRLDS
Trigger: ACTGTCAAGACGACATGAGCAGCTCACCATATGATA...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATTATCATATGGTGAGCTaGTCATGTCGTCTTGACAGT +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNYHMVS*SCRLDS
Trigger: ACTGTCAAGACGACATGAGCAGCTCACCATATGATA...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCTCTATTTGTAACCACTaGTATTCATCAGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSSICNH*YSSVAK
Trigger: TTTTGCCACTGATGAATACCAGTGGTTACAAATAGA...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCTCTATTTGTAACCACTaGTATTCATCAGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLSICNH*YSSVAK
Trigger: TTTTGCCACTGATGAATACCAGTGGTTACAAATAGA...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CAAAGGTGTTTAAGCTTTGTCACCTTCCACAGCTTTGTGGCCACATTCATATTTTGTGGTGACTTCTCTTaGACTCAGGTGATTAACTTC +
Preference number: 4 (lower is better)
Translates to: QRCLSFVTFHSFVATFIFCGDFS*TQVINF
Trigger: GAAGTTAATCACCTGAGTCCAAGAGAAGTCACCACA...AAATATGAATGTGGCCACAAAGCTGTGGAAGGTGACAAAGCTTAAACACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATAATTCCTCCTACCAGTaGCTGAGCATACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AEKPFESGSALHLESKVYNSSYQ*LSILCR
Trigger: TCTGCAGAGTATGCTCAGCCACTGGTAGGAGGAATT...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCAAATTGAGTGAATTCTaGCAACATCATAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSKLSEF*QHHNLV
Trigger: CACCAGATTATGATGTTGCCAGAATTCACTCAATTT...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATCCTTTAGGAATAAACTaGCATCCGAGCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: AEKPFESGSALHLESKVYPLGIN*HPSSSI
Trigger: AATGGAGCTGCTCGGATGTCAGTTTATTCCTAAAGG...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTATCTCTTGGACTCAGGTaGTTAACTTCGCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILSLGLR*LTSLLL
Trigger: TAGCAGCAGCGAAGTTAATCACCTGAGTCCAAGAGA...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATATTGAATGGTTCATTTaGAACCCCAGACCACAGTAT +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNIEWFI*NPRPQY
Trigger: ATACTGTGGTCTGGGGTTGCAAATGAACCATTCAAT...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATGAAATTCATTGCTACTaGGAGGTTGTAGTGGTTGCG +
Preference number: 4 (lower is better)
Translates to: AEKPFESGSALHLESKVYEIHCY*EVVVVA
Trigger: CGCAACCACTACAACCTCGCAGTAGCAATGAATTTC...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGAAAGGACAGGAAGCCTaGAGAAATAAACAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLKGQEA*RNKQFS
Trigger: AGAGAACTGTTTATTTCTGCAGGCTTCCTGTCCTTT...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATACCTTTGGCTATTTTTaGAGGGGCTGTAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNTFGYF*RGCSVF
Trigger: AAAAACACTACAGCCCCTCCAAAAATAGCCAAAGGT...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTATTCTTGTGTGCTCTGTaGCACCTGGTACACCAATTC +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILFLCAL*HLVHQF
Trigger: GAATTGGTGTACCAGGTGCCACAGAGCACACAAGAA...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATCCAGGCCATATACTGTaGAGCATTAAAGCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: AEKPFESGSALHLESKVYPGHIL*SIKALK
Trigger: CTTTAGAGCTTTAATGCTTCACAGTATATGGCCTGG...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTGAGAATCGTTTCATGTaGCATGATGTTTCTATAGAC +
Preference number: 4 (lower is better)
Translates to: SDYSTCRGKISTFWENITENRFM*HDVSID
Trigger: GTCTATAGAAACATCATGTCACATGAAACGATTCTC...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTATTCCTCATGGTCCACTaGTTTTGCAGGAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILFLMVH*FCRKKL
Trigger: CAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAA...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGATTTTCTGCTGCCATTaGGTAGGATTCACTCTAATA +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLIFCCH*VGFTLI
Trigger: TATTAGAGTGAATCCTACCCAATGGCAGCAGAAAAT...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR TCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTACCCCAACCACTTCAGTaGCAGTTATGTAATACATTC +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILPQPLQ*QLCNTF
Trigger: GAATGTATTACATAACTGTCACTGAAGTGGTTGGGG...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR TCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTAAGCAGAAAAACCATTTaGATCAGGCTCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILSRKTI*IRLSSS
Trigger: TGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGCT...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATCTGAAAAGGGATGACTaGATTAATATATGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNLKRDD*INICAF
Trigger: GAAAGCACATATATTAATGCAGTCATCCCTTTTCAG...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR GCA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATAAACCCATTGTTCAATaGAAAGTGCAAACAGTGAAA +
Preference number: 4 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYKPIVQ*KVQTVK
Trigger: TTTCACTGTTTGCACTTTGCATTGAACAATGGGTTT...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATTTTGATTCAATTGAATaGTTCATTTGCAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: VRKSQLQILRWISGYGCNFDSIE*FICNPR
Trigger: TCTGGGGTTGCAAATGAACCATTCAATTGAATCAAA...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CCA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGAAATTGAGTGAATTCTaGCAACATCATAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: QSHLEFINVPAALVINTLKLSEF*QHHNLV
Trigger: CACCAGATTATGATGTTGCCAGAATTCACTCAATTT...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR GCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTATTTGCAGGAAGAAACTaGTTCATTCCTTTCCACCAA +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILFAGRN*FIPFHQ
Trigger: TTGGTGGAAAGGAATGAAGCAGTTTCTTCCTGCAAA...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATTTTGATTCAATTGAATaGTTCATTTGCAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: AEKPFESGSALHLESKVYFDSIE*FICNPR
Trigger: TCTGGGGTTGCAAATGAACCATTCAATTGAATCAAA...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTAACGTGCAATAATTGGTaGCAAAAAGTTATTACGCAC +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILTCNNW*QKVITH
Trigger: GTGCGTAATAACTTTTTGCCACCAATTATTGCACGT...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CCA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTAAAGATAAGTACATTCTaGGAGAATATCACTGACGCT +
Preference number: 4 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILKISTF*ENITDA
Trigger: AGCGTCAGTGATATTCTCCCAGAATGTACTTATCTT...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS CCA 90 bp TCTGGGGCAGGTAGACCTGGCTTCCCAGCTTTCGGGGTATCATACTaGGCCTGGGCTGAGGAGCAGCTGTCAGTCCTGGAGAGAAGTGTA +
Preference number: 5 (lower is better)
Translates to: SGAGRPGFPAFGVSY*AWAEEQLSVLERSV
Trigger: TACACTTCTCTCCAGGACTGACAGCTGCTCCTCAGCCCAGGCCCAGTATGATACCCCGAAAGCTGGGAAGCCAGGTCTACCTGCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS GCA 90 bp TGGCCCTCTGCACACCCTGCTGTCAGAATTCTAGCCTCCATAACTTaGTGGGCTCCAGCGTCCTCGAGCAGCAGGAGCAGGACAAGTAAG +
Preference number: 5 (lower is better)
Translates to: WPSAHPAVRILASIT*WAPASSSSRSRTSK
Trigger: CTTACTTGTCCTGCTCCTGCTGCTCGAGGACGCTGGAGCCCAGCAAGTTATGGAGGCTAGAATTCTGACAGCAGGGTGTGCAGAGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449482.1
CDS TCA 90 bp CCAACTGTTCTCTTGCCCTGTGTGGTCAGTCCACTCCAGCACAGATaGTGCTGTTATTTGAGGATCCGCGATCACACCAGACTCCATCCC +
Preference number: 5 (lower is better)
Translates to: PTVLLPCVVSPLQHR*CCYLRIRDHTRLHP
Trigger: GGGATGGAGTCTGGTGTGATCGCGGATCCTCAAATAACAGCATCATCTGTGCTGGAGTGGACTGACCACACAGGGCAAGAGAACAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS GCA 90 bp CATCACCTTAGAGTCTTAGGAAAGAGCATGGCCCTCTGCACACCCTaGTGTCAGAATTCTAGCCTCCATAACTTGCTGGGCTCCAGCGTC +
Preference number: 5 (lower is better)
Translates to: HHLRVLGKSMALCTP*CQNSSLHNLLGSSV
Trigger: GACGCTGGAGCCCAGCAAGTTATGGAGGCTAGAATTCTGACAGCAGGGTGTGCAGAGGGCCATGCTCTTTCCTAAGACTCTAAGGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449482.1
CDS-3UTR CAA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCAGGCCGCCCAACGTGTTaGACACTACTCCTGCATGCA +
Preference number: 5 (lower is better)
Translates to: RTVPCVIASQAYRAISSSGRPTC*TLLLHA
Trigger: TGCATGCAGGAGTAGTGTCAAACACGTTGGGCGGCC...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS GCA 90 bp GTCCACATCCATCACCTTAGAGTCTTAGGAAAGAGCATGGCCCTCTaGACACCCTGCTGTCAGAATTCTAGCCTCCATAACTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VHIHHLRVLGKSMAL*TPCCQNSSLHNLLG
Trigger: GCCCAGCAAGTTATGGAGGCTAGAATTCTGACAGCAGGGTGTGCAGAGGGCCATGCTCTTTCCTAAGACTCTAAGGTGATGGATGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449482.1
CDS-3UTR CAA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCAGCTGACCAACTGAAGTaGTGGGGTGCCCTGACATGT +
Preference number: 5 (lower is better)
Translates to: RTVPCVIASQAYRAISSSADQLK*WGALTC
Trigger: ACATGTCAGGGCACCCCACAACTTCAGTTGGTCAGC...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS GCA 90 bp GCTGGCAACACTATGGAAGTCATTAACACAGCTCCAAGAGGAAAATaGCCCAGCATGTGGTACCATGCCTGGCCCACAGTAACCAACCAA +
Preference number: 5 (lower is better)
Translates to: AGNTMEVINTAPRGK*PSMWYHAWPTVTNQ
Trigger: TTGGTTGGTTACTGTGGGCCAGGCATGGTACCACATGCTGGGGCATTTTCCTCTTGGAGCTGTGTTAATGACTTCCATAGTGTTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486004.1
CDS GCA 90 bp AACTTCGCTGCTGCTATAGCGAACTGGGGTTTCCTCATGGTCCACTaGTTTTGCAGGAAGAAACTGCTTCATTCCTTTCCACCAACCTGC +
Preference number: 5 (lower is better)
Translates to: NFAAAIANWGFLMVH*FCRKKLLHSFPPTC
Trigger: GCAGGTTGGTGGAAAGGAATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGTTCGCTATAGCAGCAGCGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000496736.1
CDS-3UTR CAA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCCGAGGAGGTGGAGGTaGAGTAAGTTTTGGAGGACG +
Preference number: 5 (lower is better)
Translates to: VIASQAYRAISSSLMYLQPRRWR*SKFWRT
Trigger: CGTCCTCCAAAACTTACTCAACCTCCACCTCCTCGG...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCGCTGACCAACTGAAGTaGTGGGGTGCCCTGACATGT +
Preference number: 5 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSADQLK*WGALTC
Trigger: ACATGTCAGGGCACCCCACAACTTCAGTTGGTCAGC...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS TCA 90 bp GATACCTTTACTAATTACAACACTGATTTGGCCGCCCAACGTGTTTaGCACTACTCCTGCATGCACACCAGCCATGCACAATGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: DTFTNYNTDLAAQRV*HYSCMHTSHAQWRG
Trigger: TCCTCGCCATTGTGCATGGCTGGTGTGCATGCAGGAGTAGTGTCAAACACGTTGGGCGGCCAAATCAGTGTTGTAATTAGTAAAGGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS GCA 90 bp AACTTCGCTGCTGCTATAGCGAACTGGGGTTTCCTCATGGTCCACTaGTTTTGCAGGAAGAAACTGCTTCATTCCTTTCCACCAACCTTC +
Preference number: 5 (lower is better)
Translates to: NFAAAIANWGFLMVH*FCRKKLLHSFPPTF
Trigger: GAAGGTTGGTGGAAAGGAATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGTTCGCTATAGCAGCAGCGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326857.9
CDS-3UTR CAA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGTCCACATCCATCACCTaGCTGGGCTCCAGCGTCCTC +
Preference number: 5 (lower is better)
Translates to: QSHLEFINVPAALVINTLSTSIT*LGSSVL
Trigger: GAGGACGCTGGAGCCCAGCAAGGTGATGGATGTGGA...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCACATGGTCCACTGCTTTaGCAGGAAGAAACTGCTTCA +
Preference number: 5 (lower is better)
Translates to: RTVPCVIASQAYRAISSSHGPLL*QEETAS
Trigger: TGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATG...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCTTTCCAACTGTTCTCTaGCCCTGTGTGGTCAGTCCA +
Preference number: 5 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSFPTVL*PCVVSP
Trigger: TGGACTGACCACACAGGGCAAGAGAACAGTTGGAAA...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCGTGTTTTTGAGGTCATaGCTGTTCCGAGGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSVFLRS*LFRGGG
Trigger: TCCACCTCCTCGGAACAGCAATGACCTCAAAAACAC...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATTCCACATCCATCACCTaGCTGGGCTCCAGCGTCCTC +
Preference number: 5 (lower is better)
Translates to: AEKPFESGSALHLESKVYSTSIT*LGSSVL
Trigger: GAGGACGCTGGAGCCCAGCAAGGTGATGGATGTGGA...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CAA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCCCAGACCACAGTATTaGCCTATTTCAGTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLPRPQY*PISVLL
Trigger: CAGCAGAACTGAAATAGGCAAATACTGTGGTCTGGG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATCCGAGGAGGTGGAGGTaGAGTAAGTTTTGGAGGACG +
Preference number: 5 (lower is better)
Translates to: VRKSQLQILRWISGYGCNPRRWR*SKFWRT
Trigger: CGTCCTCCAAAACTTACTCAACCTCCACCTCCTCGG...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCTATCAGGACTGGCAGTaGTTTGTTCTGTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSYQDWQ*FVLSVQ
Trigger: CTGCACAGACAGAACAAACAACTGCCAGTCCTGATA...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCATGGTCCACTGCTTTaGCAGGAAGAAACTGCTTCA +
Preference number: 5 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLHGPLL*QEETAS
Trigger: TGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS CCA 90 bp TGTTCAGCCCTATACGTACCTGAGAAACTGGATAACAGGCTGCCTTaGGCAATAATGACGGAAAGAAGGGAAACAAATAAGGTGAACCCT +
Preference number: 5 (lower is better)
Translates to: CSALYVPEKLDNRLP*AIMTERRETNKVNP
Trigger: AGGGTTCACCTTATTTGTTTCCCTTCTTTCCGTCATTATTGCCCAAGGCAGCCTGTTATCCAGTTTCTCAGGTACGTATAGGGCTGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470393.1
CDS-3UTR CAA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCCCAGACCACAGTATTaGCCTATTTCAGTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSPRPQY*PISVLL
Trigger: CAGCAGAACTGAAATAGGCAAATACTGTGGTCTGGG...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCTGTGCAGGAAATTCATaGCTACTGCGAGGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSCAGNS*LLRGCS
Trigger: ACTACAACCTCGCAGTAGCAATGAATTTCCTGCACA...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATCAGTACCGTGCGTTATaGCCAGTCAGGCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYQYRAL*PVRLTE
Trigger: CTCTGTAAGCCTGACTGGCAATAACGCACGGTACTG...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGCAGTACCGTGCGTTATaGCCAGTCAGGCTTACAGAG +
Preference number: 5 (lower is better)
Translates to: QSHLEFINVPAALVINTLQYRAL*PVRLTE
Trigger: CTCTGTAAGCCTGACTGGCAATAACGCACGGTACTG...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ACATATAGGACTACTCAAACCTCTTACCACACAAAGTGCACGATCACGCAGTCCCCATTGCAAATAAAGTaGGGGGTGGGAGAAGAATCT +
Preference number: 5 (lower is better)
Translates to: TYRTTQTSYHTKCTITQSPLQIK*GVGEES
Trigger: AGATTCTTCTCCCACCCCCAACTTTATTTGCAATGG...GGACTGCGTGATCGTGCACTTTGTGTGGTAAGAGGTTTGAGTAGTCCTATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCTCAAAGTCACCAAATTaGATGCGAACTCTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSSKSPN*MRTLSP
Trigger: GGGAGAGAGAGTTCGCATCAAATTTGGTGACTTTGA...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATTTTCCAACTGTTCTCTaGCCCTGTGTGGTCAGTCCA +
Preference number: 5 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYFPTVL*PCVVSP
Trigger: TGGACTGACCACACAGGGCAAGAGAACAGTTGGAAA...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTGGGGCTGTAGTGTTTTaGAGGTCATTGCTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: SDYSTCRGKISTFWENITGAVVF*RSLLFR
Trigger: TCGGAACAGCAATGACCTCAAAAACACTACAGCCCC...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CAA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATGGGGCTGTAGTGTTTTaGAGGTCATTGCTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYGAVVF*RSLLFR
Trigger: TCGGAACAGCAATGACCTCAAAAACACTACAGCCCC...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp AGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATATCAAACAGGACATTaGAAATTTAACAGGCGAGCA +
Preference number: 5 (lower is better)
Translates to: RTVPCVIASQAYRAISSSYQTGH*KFNRRA
Trigger: TGCTCGCCTGTTAAATTTCAAATGTCCTGTTTGATA...TGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCACCACAGATGTGACGTaGTTAGCCAAAGAACTTTCA +
Preference number: 5 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSTTDVT*LAKELS
Trigger: TGAAAGTTCTTTGGCTAACAACGTCACATCTGTGGT...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp ACCACACAAAGTGCACGATCACGCAGTCCTGAAAAATACACGTTAGGTTTATATAGGACTGGCAGTTGTTaGTTCTGTCTGTGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: TTQSARSRSPEKYTLGLYRTGSC*FCLCRK
Trigger: TTTCCTGCACAGACAGAACAAACAACTGCCAGTCCT...ATATAAACCTAACGTGTATTTTTCAGGACTGCGTGATCGTGCACTTTGTGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGTATCAGGACTGGCAGTaGTTTGTTCTGTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: QSHLEFINVPAALVINTLYQDWQ*FVLSVQ
Trigger: CTGCACAGACAGAACAAACAACTGCCAGTCCTGATA...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGGCCAGCGCTACATCTTaGGTTACATTTGGAGTTACG +
Preference number: 5 (lower is better)
Translates to: QSHLEFINVPAALVINTLASATS*VTFGVT
Trigger: CGTAACTCCAAATGTAACCAAAGATGTAGCGCTGGC...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATATCACGCCTCAAAGTTaGGAGAAGGAAAAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: VRKSQLQILRWISGYGCNITPQS*EKEKPV
Trigger: CACTGGCTTTTCCTTCTCCAAACTTTGAGGCGTGAT...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CAA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCCAGCGAATAAACCCATaGTTCAATGCAAAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLQRINP*FNAKCK
Trigger: TTTGCACTTTGCATTGAACAATGGGTTTATTCGCTG...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CAA 90 bp ATTAGGTATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCAATTTTCTGCTGCCATaGGGTAGGATTCACTCTAAT +
Preference number: 5 (lower is better)
Translates to: IRYFKNSTVRYCQSGLQSNFLLP*GRIHSN
Trigger: ATTAGAGTGAATCCTACCCAATGGCAGCAGAAAATT...GCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATACCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATTGTGCAGGAAATTCATaGCTACTGCGAGGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: VRKSQLQILRWISGYGCNCAGNS*LLRGCS
Trigger: ACTACAACCTCGCAGTAGCAATGAATTTCCTGCACA...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp TATTTCAAGAACAGTACCGTGCGTTATTGCCAGTCAGGCTTACAGAGCCATCTCTATCAAACAGGACATTaGAAATTTAACAGGCGAGCA +
Preference number: 5 (lower is better)
Translates to: YFKNSTVRYCQSGLQSHLYQTGH*KFNRRA
Trigger: TGCTCGCCTGTTAAATTTCAAATGTCCTGTTTGATA...GAGATGGCTCTGTAAGCCTGACTGGCAATAACGCACGGTACTGTTCTTGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp GTTATTGCCAGTCAGGCTTACAGAGCCATCTCGAGTTCATTAATGTACCTGCAGATTTTCAGTTGTTACTaGATTGTCTCCAAAGCCGTA +
Preference number: 5 (lower is better)
Translates to: VIASQAYRAISSSLMYLQIFSCY*IVSKAV
Trigger: TACGGCTTTGGAGACAATCAAGTAACAACTGAAAAT...CTGCAGGTACATTAATGAACTCGAGATGGCTCTGTAAGCCTGACTGGCAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CAA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTAGTGTTTTTGAGGTCATaGCTGTTCCGAGGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILVFLRS*LFRGGG
Trigger: TCCACCTCCTCGGAACAGCAATGACCTCAAAAACAC...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CAA 90 bp CAGAGCCATCTCGAGTTCATTAATGTACCTGCAGCATTGGTAATAAATACTCTGAATTTTCTGCTGCCATaGGGTAGGATTCACTCTAAT +
Preference number: 5 (lower is better)
Translates to: QSHLEFINVPAALVINTLNFLLP*GRIHSN
Trigger: ATTAGAGTGAATCCTACCCAATGGCAGCAGAAAATT...CAGAGTATTTATTACCAATGCTGCAGGTACATTAATGAACTCGAGATGGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTAAGGACTGGCAGTTGTTaGTTCTGTCTGTGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILRTGSC*FCLCRK
Trigger: TTTCCTGCACAGACAGAACAAACAACTGCCAGTCCT...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CAA 90 bp AGTGACTACAGTACATGCCGAGGTAAGATAAGTACATTCTGGGAGAATATCACTGTTCCTGTTTACACATaGAGGAGCATACTTAAAGGA +
Preference number: 5 (lower is better)
Translates to: SDYSTCRGKISTFWENITVPVYT*RSILKG
Trigger: TCCTTTAAGTATGCTCCTCAATGTGTAAACAGGAAC...AGTGATATTCTCCCAGAATGTACTTATCTTACCTCGGCATGTACTGTAGTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS-3UTR CAA 90 bp GTCAGAAAATCCCAGCTACAGATCTTAAGATGGATAAGTGGATATGGCTGCAATGTTCCTGTTTACACATaGAGGAGCATACTTAAAGGA +
Preference number: 5 (lower is better)
Translates to: VRKSQLQILRWISGYGCNVPVYT*RSILKG
Trigger: TCCTTTAAGTATGCTCCTCAATGTGTAAACAGGAAC...ATTGCAGCCATATCCACTTATCCATCTTAAGATCTGTAGCTGGGATTTTCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS-3UTR CAA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATCCATTGCAAATAAAGTaGGGGGTGGGAGAAGAATCT +
Preference number: 5 (lower is better)
Translates to: AEKPFESGSALHLESKVYPLQIK*GVGEES
Trigger: AGATTCTTCTCCCACCCCCAACTTTATTTGCAATGG...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS TCA 90 bp TATATAAGGAGTTATCCCTTAAATCTTCAGCTGCATGTAAAGAAATaGCCTATGGCCAGTAAAAGAAACACTGGAATGAGTCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: YIRSYPLNLQLHVKK*PMASKRNTGMSQQD
Trigger: GTCCTGCTGACTCATTCCAGTGTTTCTTTTACTGGCCATAGGTCATTTCTTTACATGCAGCTGAAGATTTAAGGGATAACTCCTTATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470393.1
CDS TCA 90 bp TCTATATTTAGCTTCTACTTCACATTTGGTAGTTTTGGACTCAGGTaGACTAGTTATGTACTAACCTGTTTCTCCAGTGCCAAGCACACA +
Preference number: 5 (lower is better)
Translates to: SIFSFYFTFGSFGLR*TSYVLTCFSSAKHT
Trigger: TGTGTGCTTGGCACTGGAGAAACAGGTTAGTACATAACTAGTTCACCTGAGTCCAAAACTACCAAATGTGAAGTAGAAGCTAAATATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470393.1
ENST00000479144.5
CDS GCA 90 bp AGCAATGTGATTTCATTGCCTTTTGATTCAATTGAATGGTTCATTTaGAACCCCAGACCACAGTATTTGCCTATTTCAGTTCTGCTGACT +
Preference number: 5 (lower is better)
Translates to: SNVISLPFDSIEWFI*NPRPQYLPISVLLT
Trigger: AGTCAGCAGAACTGAAATAGGCAAATACTGTGGTCTGGGGTTGCAAATGAACCATTCAATTGAATCAAAAGGCAATGAAATCACATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000449482.1
ENST00000486004.1
CDS CCA 90 bp TTATCTATAACAGAGTATGAGGCCAAAAATCCGCGTCCAGAAACATaGATTCCACTCATGAACAGCAATGTGATTTCATTGCCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: LSITEYEAKNPRPET*IPLMNSNVISLPFD
Trigger: ATCAAAAGGCAATGAAATCACATTGCTGTTCATGAGTGGAATCCATGTTTCTGGACGCGGATTTTTGGCCTCATACTCTGTTATAGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000449482.1
ENST00000469648.5
ENST00000486004.1
CDS CCA 90 bp CTGCCATTGGGTAGGATTCACTCTAATAAAACGTGCAATAATTGGTaGCAAAAAGTTATTACGCACATCCTGGTGATAATCTTTGTTTCC +
Preference number: 5 (lower is better)
Translates to: LPLGRIHSNKTCNNW*QKVITHILVIIFVS
Trigger: GGAAACAAAGATTATCACCAGGATGTGCGTAATAACTTTTTGCCACCAATTATTGCACGTTTTATTAGAGTGAATCCTACCCAATGGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000460008.1
ENST00000470393.1
ENST00000479144.5
ENST00000494614.5
CDS CCA 90 bp CTGCTGCCATTGGGTAGGATTCACTCTAATAAAACGTGCAATAATTaGTGGCAAAAAGTTATTACGCACATCCTGGTGATAATCTTTGTT +
Preference number: 5 (lower is better)
Translates to: LLPLGRIHSNKTCNN*WQKVITHILVIIFV
Trigger: AACAAAGATTATCACCAGGATGTGCGTAATAACTTTTTGCCACCAATTATTGCACGTTTTATTAGAGTGAATCCTACCCAATGGCAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000460008.1
ENST00000470393.1
ENST00000479144.5
ENST00000494614.5
CDS-3UTR CAA 90 bp GCAGAAAAACCATTTGAATCAGGCTCAGCTCTTCATCTGGAAAGTAAAGTTTATTCACCTTCCACAGCTTaGTGGCCACATTCATATTTA +
Preference number: 5 (lower is better)
Translates to: AEKPFESGSALHLESKVYSPSTA*WPHSYL
Trigger: TAAATATGAATGTGGCCACAAAGCTGTGGAAGGTGA...ATAAACTTTACTTTCCAGATGAAGAGCTGAGCCTGATTCAAATGGTTTTTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS GCA 90 bp AGCAATGTGATTTCATTGCCTTTTGATTCAATTGAATGGTTCATTTaGAACCCCAGACCACAGTATTTGCCTTTAATAGGCTTAAGATGC +
Preference number: 5 (lower is better)
Translates to: SNVISLPFDSIEWFI*NPRPQYLPLIGLRC
Trigger: GCATCTTAAGCCTATTAAAGGCAAATACTGTGGTCTGGGGTTGCAAATGAACCATTCAATTGAATCAAAAGGCAATGAAATCACATTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469648.5
CDS-3UTR CAA 90 bp CTTAAACTGTGCTGTTTCCTAAGATCAAGTAACAGCCAAGTCAGTGTAATTTTAACCACAGATGTGACGTaGTTAGCCAAAGAACTTTCA +
Preference number: 5 (lower is better)
Translates to: LKLCCFLRSSNSQVSVILTTDVT*LAKELS
Trigger: TGAAAGTTCTTTGGCTAACAACGTCACATCTGTGGT...TAAAATTACACTGACTTGGCTGTTACTTGATCTTAGGAAACAGCACAGTTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS GCA 72 bp CGCCCGGCTCGCCATCGCGGCGGCCGGCAGTCTGCCTaGATAGTGCGGGTGCCTCGGCAGCCCCGCGCGCCT +
Preference number: 6 (lower is better)
Translates to: RPARHRGGRQSA*IVRVPRQPRAP
Trigger: AGGCGCGCGGGGCTGCCGAGGCACCCGCACTATGCAGGCAGACTGCCGGCCGCCGCGATGGCGAGCCGGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS GCA 72 bp CCACCGCCCGGCTCGCCATCGCGGCGGCCGGCAGTCTaGCTGCATAGTGCGGGTGCCTCGGCAGCCCCGCGC +
Preference number: 6 (lower is better)
Translates to: PPPGSPSRRPAV*LHSAGASAAPR
Trigger: GCGCGGGGCTGCCGAGGCACCCGCACTATGCAGGCAGACTGCCGGCCGCCGCGATGGCGAGCCGGGCGGTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326840.11
CDS CCA 72 bp GGTAGACCTGGCTTCCCAGCTTTCGGGGTATCATACTaGGCCTGGGCTGAGGAGCAGCTGTCAGTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: GRPGFPAFGVSY*AWAEEQLSVLE
Trigger: CTCCAGGACTGACAGCTGCTCCTCAGCCCAGGCCCAGTATGATACCCCGAAAGCTGGGAAGCCAGGTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS CCA 72 bp CACCCTGCTGTCAGAATTCTAGCCTCCATAACTTGCTaGGCTCCAGCGTCCTCGAGCAGCAGGAGCAGGACA +
Preference number: 6 (lower is better)
Translates to: HPAVRILASITC*APASSSSRSRT
Trigger: TGTCCTGCTCCTGCTGCTCGAGGACGCTGGAGCCCAGCAAGTTATGGAGGCTAGAATTCTGACAGCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449482.1
CDS CAA 72 bp TGCACACCCTGCTGTCAGAATTCTAGCCTCCATAACTaGCTGGGCTCCAGCGTCCTCGAGCAGCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: CTPCCQNSSLHN*LGSSVLEQQEQ
Trigger: CTGCTCCTGCTGCTCGAGGACGCTGGAGCCCAGCAAGTTATGGAGGCTAGAATTCTGACAGCAGGGTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449482.1
CDS TCA 72 bp TGGTTCCCCGTAGCCTTGAAAGTGGATGTGGAGGGCTaGCCAACTGAAGTTGTGGGGTGCCCTGACATGTCC +
Preference number: 6 (lower is better)
Translates to: WFPVALKVDVEG*PTEVVGCPDMS
Trigger: GGACATGTCAGGGCACCCCACAACTTCAGTTGGTCAGCCCTCCACATCCACTTTCAAGGCTACGGGGAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS CCA 72 bp CCTGCTCCTGATACTTCTTGTGTGCTCTGTGGCACCTaGTACACCAATTCGTCTGGGGCAGGTAGACCTGGC +
Preference number: 6 (lower is better)
Translates to: PAPDTSCVLCGT*YTNSSGAGRPG
Trigger: GCCAGGTCTACCTGCCCCAGACGAATTGGTGTACCAGGTGCCACAGAGCACACAAGAAGTATCAGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS CCA 72 bp CATACTGGGCCTGGGCTGAGGAGCAGCTGTCAGTCCTaGAGAGAAGTGTATTGTAAGTTCCCACTAGTGGGG +
Preference number: 6 (lower is better)
Translates to: HTGPGLRSSCQS*REVYCKFPLVG
Trigger: CCCCACTAGTGGGAACTTACAATACACTTCTCTCCAGGACTGACAGCTGCTCCTCAGCCCAGGCCCAGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS GCA 72 bp ATTCCCCATCCCTTCCTGCTCCTGATACTTCTTGTGTaGTCTGTGGCACCTGGTACACCAATTCGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: IPHPFLLLILLV*SVAPGTPIRLG
Trigger: CCCCAGACGAATTGGTGTACCAGGTGCCACAGAGCACACAAGAAGTATCAGGAGCAGGAAGGGATGGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS CAA 90 bp CGCTGCTGCTATAGCGAACTGGGGTTTCCTCATGGTCCACTGCTTTaGCAGGAAGAAACTGCTTCATTCCTTTCCACCAACCTGCCCGGT +
Preference number: 6 (lower is better)
Translates to: RCCYSELGFPHGPLL*QEETASFLSTNLPG
Trigger: ACCGGGCAGGTTGGTGGAAAGGAATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGTTCGCTATAGCAGCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000496736.1
CDS TCA 72 bp CTCTTGCCCTGTGTGGTCAGTCCACTCCAGCACAGATaGTGCTGTTATTTGAGGATCCGCGATCACACCAGA +
Preference number: 6 (lower is better)
Translates to: LLPCVVSPLQHR*CCYLRIRDHTR
Trigger: TCTGGTGTGATCGCGGATCCTCAAATAACAGCATCATCTGTGCTGGAGTGGACTGACCACACAGGGCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS GCA 72 bp ATTTGGCCGCCCAACGTGTTTGACACTACTCCTGCATaGACACCAGCCATGCACAATGGCGAGGAATCTCTA +
Preference number: 6 (lower is better)
Translates to: IWPPNVFDTTPA*TPAMHNGEESL
Trigger: TAGAGATTCCTCGCCATTGTGCATGGCTGGTGTGCATGCAGGAGTAGTGTCAAACACGTTGGGCGGCCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS GCA 72 bp GTTTCCTCATGGTCCACTGCTTTTGCAGGAAGAAACTaGTTCATTCCTTTCCACCAACCTGCCCGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: VSSWSTAFAGRN*FIPFHQPARSQ
Trigger: CTGGGACCGGGCAGGTTGGTGGAAAGGAATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000496736.1
CDS GCA 72 bp AGAGTCTTAGGAAAGAGCATGGCCCTCTGCACACCCTaGTGTCAGAATTCTAGCCTCCATAACTTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RVLGKSMALCTP*CQNSSLHNLLG
Trigger: GCCCAGCAAGTTATGGAGGCTAGAATTCTGACAGCAGGGTGTGCAGAGGGCCATGCTCTTTCCTAAGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449482.1
CDS CCA 72 bp GATTGGGGTTGCATACTCAGGCCCCGTAATTGGGAGTaGTTCAGCATAGGCATGATAAACTTCCTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: DWGCILRPRNWE*FSIGMINFLPW
Trigger: CCAGGGCAGGAAGTTTATCATGCCTATGCTGAACCACTCCCAATTACGGGGCCTGAGTATGCAACCCCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS CCA 72 bp ATTAACACAGCTCCAAGAGGAAAATGCCCCAGCATGTaGTACCATGCCTGGCCCACAGTAACCAACCAACGT +
Preference number: 6 (lower is better)
Translates to: INTAPRGKCPSM*YHAWPTVTNQR
Trigger: ACGTTGGTTGGTTACTGTGGGCCAGGCATGGTACCACATGCTGGGGCATTTTCCTCTTGGAGCTGTGTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486004.1
CDS GCA 72 bp AGTAGTGAGGACCATGACCAGCACAGGGACAAGAACTaGAGCCAGCGCTACATCTTTGGTTACATTTGGAGT +
Preference number: 6 (lower is better)
Translates to: SSEDHDQHRDKN*SQRYIFGYIWS
Trigger: ACTCCAAATGTAACCAAAGATGTAGCGCTGGCTGCAGTTCTTGTCCCTGTGCTGGTCATGGTCCTCACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000470393.1
ENST00000479144.5
ENST00000494614.5
CDS GCA 72 bp CATCACCTTAGAGTCTTAGGAAAGAGCATGGCCCTCTaGACACCCTGCTGTCAGAATTCTAGCCTCCATAAC +
Preference number: 6 (lower is better)
Translates to: HHLRVLGKSMAL*TPCCQNSSLHN
Trigger: GTTATGGAGGCTAGAATTCTGACAGCAGGGTGTGCAGAGGGCCATGCTCTTTCCTAAGACTCTAAGGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449482.1
CDS CCA 72 bp TCTTTGATGAAGTGTACCAACAATTCCTCCTACCAGTaGCTGAGCATACTCTGCAGAGTCAGCCTGCAGCAC +
Preference number: 6 (lower is better)
Translates to: SLMKCTNNSSYQ*LSILCRVSLQH
Trigger: GTGCTGCAGGCTGACTCTGCAGAGTATGCTCAGCCACTGGTAGGAGGAATTGTTGGTACACTTCATCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS CAA 90 bp CGCTGCTGCTATAGCGAACTGGGGTTTCCTCATGGTCCACTGCTTTaGCAGGAAGAAACTGCTTCATTCCTTTCCACCAACCTTCATTGT +
Preference number: 6 (lower is better)
Translates to: RCCYSELGFPHGPLL*QEETASFLSTNLHC
Trigger: ACAATGAAGGTTGGTGGAAAGGAATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGTTCGCTATAGCAGCAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326857.9
CDS TCA 72 bp ACTAATTACAACACTGATTTGGCCGCCCAACGTGTTTaGCACTACTCCTGCATGCACACCAGCCATGCACAA +
Preference number: 6 (lower is better)
Translates to: TNYNTDLAAQRV*HYSCMHTSHAQ
Trigger: TTGTGCATGGCTGGTGTGCATGCAGGAGTAGTGTCAAACACGTTGGGCGGCCAAATCAGTGTTGTAATTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326840.11
ENST00000326857.9
CDS TCA 72 bp TGGATTGCACAGCTAGTCAATGACAGGGCAGCAACTTaGCTCTGGGTCTTCCGACTTAAGTATGGACTCCAA +
Preference number: 6 (lower is better)
Translates to: WIAQLVNDRAAT*LWVFRLKYGLQ
Trigger: TTGGAGTCCATACTTAAGTCGGAAGACCCAGAGTCAAGTTGCTGCCCTGTCATTGACTAGCTGTGCAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470393.1
CDS GCA 72 bp GCTGCTATAGCGAACTGGGGTTTCCTCATGGTCCACTaGTTTTGCAGGAAGAAACTGCTTCATTCCTTTCCA +
Preference number: 6 (lower is better)
Translates to: AAIANWGFLMVH*FCRKKLLHSFP
Trigger: TGGAAAGGAATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGTTCGCTATAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000496736.1
CDS CAA 90 bp GGCTGTAGTGTTTTTGAGGTCATTGCTGTTCCGAGGAGGTGGAGGTaGAGTAAGTTTTGGAGGACGACCTTTAGGAATAAACTGACATCC +
Preference number: 6 (lower is better)
Translates to: GCSVFEVIAVPRRWR*SKFWRTTFRNKLTS
Trigger: GGATGTCAGTTTATTCCTAAAGGTCGTCCTCCAAAACTTACTCAACCTCCACCTCCTCGGAACAGCAATGACCTCAAAAACACTACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000470393.1
ENST00000479144.5
ENST00000494614.5
CDS GCA 72 bp CTCCCATCTTTACACGGATCTCCCATTCACAAACAGTaGTGTTGGGATAGGTCTGTGGGTAGTTTATGGATG +
Preference number: 6 (lower is better)
Translates to: LPSLHGSPIHKQ*CWDRSVGSLWM
Trigger: CATCCATAAACTACCCACAGACCTATCCCAACAGCACTGTTTGTGAATGGGAGATCCGTGTAAAGATGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000449482.1
ENST00000486004.1
CDS CCA 72 bp TGTAGTGTTTTTGAGGTCATTGCTGTTCCGAGGAGGTaGAGGTTGAGTAAGTTTTGGAGGACGACCTTTAGG +
Preference number: 6 (lower is better)
Translates to: CSVFEVIAVPRR*RLSKFWRTTFR
Trigger: CCTAAAGGTCGTCCTCCAAAACTTACTCAACCTCCACCTCCTCGGAACAGCAATGACCTCAAAAACACTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000470393.1
ENST00000479144.5
ENST00000494614.5
CDS CAA 72 bp TATAGCGAACTGGGGTTTCCTCATGGTCCACTGCTTTaGCAGGAAGAAACTGCTTCATTCCTTTCCACCAAC +
Preference number: 6 (lower is better)
Translates to: YSELGFPHGPLL*QEETASFLSTN
Trigger: GTTGGTGGAAAGGAATGAAGCAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGTTCGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000496736.1
CDS CAA 90 bp ATATCAGGACTGGCAGTTGTTTGTTCTGTCTGTGCAGGAAATTCATaGCTACTGCGAGGTTGTAGTGGTTGCGTAAATTTTGGGGCACGA +
Preference number: 6 (lower is better)
Translates to: ISGLAVVCSVCAGNS*LLRGCSGCVNFGAR
Trigger: TCGTGCCCCAAAATTTACGCAACCACTACAACCTCGCAGTAGCAATGAATTTCCTGCACAGACAGAACAAACAACTGCCAGTCCTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000470393.1
ENST00000479144.5
ENST00000494614.5
CDS TCA 72 bp TTTTTGAGGTCATTGCTGTTCCGAGGAGGTGGAGGTTaGGTAAGTTTTGGAGGACGACCTTTAGGAATAAAC +
Preference number: 6 (lower is better)
Translates to: FLRSLLFRGGGG*VSFGGRPLGIN
Trigger: GTTTATTCCTAAAGGTCGTCCTCCAAAACTTACTCAACCTCCACCTCCTCGGAACAGCAATGACCTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000470393.1
ENST00000479144.5
ENST00000494614.5
CDS GCA 72 bp GCAGGAAATTCATTGCTACTGCGAGGTTGTAGTGGTTaGGTAAATTTTGGGGCACGACCTTTGGCTATTTTT +
Preference number: 6 (lower is better)
Translates to: AGNSLLLRGCSG*VNFGARPLAIF
Trigger: AAAAATAGCCAAAGGTCGTGCCCCAAAATTTACGCAACCACTACAACCTCGCAGTAGCAATGAATTTCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000470393.1
ENST00000479144.5
ENST00000494614.5
CDS GCA 72 bp GTCTCACAGCTCCGTAGATCTGGGAATTCCTTACACTaGCAAGAGGTAGAACAGAGAAACCTCATAATACAT +
Preference number: 6 (lower is better)
Translates to: VSQLRRSGNSLH*QEVEQRNLIIH
Trigger: ATGTATTATGAGGTTTCTCTGTTCTACCTCTTGGCAGTGTAAGGAATTCCCAGATCTACGGAGCTGTGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470393.1
CDS CCA 72 bp CTATACGTACCTGAGAAACTGGATAACAGGCTGCCTTaGGCAATAATGACGGAAAGAAGGGAAACAAATAAG +
Preference number: 6 (lower is better)
Translates to: LYVPEKLDNRLP*AIMTERRETNK
Trigger: CTTATTTGTTTCCCTTCTTTCCGTCATTATTGCCCAAGGCAGCCTGTTATCCAGTTTCTCAGGTACGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470393.1
CDS CAA 72 bp CTGGCAGTTGTTTGTTCTGTCTGTGCAGGAAATTCATaGCTACTGCGAGGTTGTAGTGGTTGCGTAAATTTT +
Preference number: 6 (lower is better)
Translates to: LAVVCSVCAGNS*LLRGCSGCVNF
Trigger: AAAATTTACGCAACCACTACAACCTCGCAGTAGCAATGAATTTCCTGCACAGACAGAACAAACAACTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000470393.1
ENST00000479144.5
ENST00000494614.5
CDS TCA 72 bp AGCTTCTACTTCACATTTGGTAGTTTTGGACTCAGGTaGACTAGTTATGTACTAACCTGTTTCTCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: SFYFTFGSFGLR*TSYVLTCFSSA
Trigger: GGCACTGGAGAAACAGGTTAGTACATAACTAGTTCACCTGAGTCCAAAACTACCAAATGTGAAGTAGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470393.1
ENST00000479144.5
CDS TCA 72 bp CAGAGATTAGGAGAGAAGAGAGCTATAAAGATAGAGTaGGTGAGAGAGAGAGAGAGAGACACTTCTAGAATA +
Preference number: 6 (lower is better)
Translates to: QRLGEKRAIKIE*VRERERDTSRI
Trigger: TATTCTAGAAGTGTCTCTCTCTCTCTCTCTCACTCACTCTATCTTTATAGCTCTCTTCTCTCCTAATCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470393.1
CDS CAA 72 bp CAAGAATCAGAATCTTCAATGTCAAAGTCACCAAATTaGATGCGAACTCTCTCTCCCATCTTTACACGGATC +
Preference number: 6 (lower is better)
Translates to: QESESSMSKSPN*MRTLSPIFTRI
Trigger: GATCCGTGTAAAGATGGGAGAGAGAGTTCGCATCAAATTTGGTGACTTTGACATTGAAGATTCTGATTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000449482.1
ENST00000486004.1
CDS CCA 72 bp AGCAATGTGATTTCATTGCCTTTTGATTCAATTGAATaGTTCATTTGCAACCCCAGACCACAGTATTTGCCT +
Preference number: 6 (lower is better)
Translates to: SNVISLPFDSIE*FICNPRPQYLP
Trigger: AGGCAAATACTGTGGTCTGGGGTTGCAAATGAACCATTCAATTGAATCAAAAGGCAATGAAATCACATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000449482.1
ENST00000469648.5
ENST00000486004.1
CDS CCA 72 bp GGTAGGATTCACTCTAATAAAACGTGCAATAATTGGTaGCAAAAAGTTATTACGCACATCCTGGTGATAATC +
Preference number: 6 (lower is better)
Translates to: GRIHSNKTCNNW*QKVITHILVII
Trigger: GATTATCACCAGGATGTGCGTAATAACTTTTTGCCACCAATTATTGCACGTTTTATTAGAGTGAATCCTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000326840.11
ENST00000326857.9
ENST00000460008.1
ENST00000470393.1
ENST00000479144.5
ENST00000494614.5
CDS TCA 72 bp AAAAAGATTTGCTATAGTCAACCTATGAGCATTTACTaGGAATCCTCATGTACAGAGAAGTATGTGAGGTGT +
Preference number: 6 (lower is better)
Translates to: KKICYSQPMSIY*ESSCTEKYVRC
Trigger: ACACCTCACATACTTCTCTGTACATGAGGATTCTCAGTAAATGCTCATAGGTTGACTATAGCAAATCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470393.1
CDS CCA 72 bp CAAGCTATTTCCAAGTATTGTGGCTCTATTTCTTCTTaGCTAATTCACTTGGCATTAGACTATAAATCTCGA +
Preference number: 6 (lower is better)
Translates to: QAISKYCGSISS*LIHLALDYKSR
Trigger: TCGAGATTTATAGTCTAATGCCAAGTGAATTAGCCAAGAAGAAATAGAGCCACAATACTTGGAAATAGCTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470393.1
CDS CAA 72 bp AAATGTTTAACTTCTCAATCAAGCTATTTCCAAGTATaGTGGCTCTATTTCTTCTTGGCTAATTCACTTGGC +
Preference number: 6 (lower is better)
Translates to: KCLTSQSSYFQV*WLYFFLANSLG
Trigger: GCCAAGTGAATTAGCCAAGAAGAAATAGAGCCACAATACTTGGAAATAGCTTGATTGAGAAGTTAAACATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470393.1